Clc01G18600 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGGGATCGGTGAAGTTTTTAGACTTCTTACATAAACTGCATTTGTTAATTATCAAGCTCTTGAAACTGTTATGAAGCTGTTTTAGGCTGTGATTGAAGTTTTTGTTGATTCTATTGAAGTTTTTGTTGATTCTCTCAACGATTTGCATCAATGTCATTCGAAACAAGGCTTCCTATTGATCATGTCTTAGTTCCTCACTGAATTATGTTTCACTTGTGTGTCTTCTTTCTCGTTTGTACTGTAAAAATCGAAATTGTTCCTCAATACAATTGAAGAAAATACCGAAAGATTTGAACTCCGAATATCAAGTTGATGAGTGTAAACATTTTCCTGACAAATATAAGCTAATGGATGTACGAAAAATTGAAAATTCTTATTCATCTCTAATCCGATATACAAAGAATTCATTTCCAAAACAATAAAAAGGGGGAAAATATGATCAACAGAAGAACAAATCCTCAAAATAATGATGACTATCAAAATTACAATAACAACGATTAAAATAATAATAATAATAACGATCAAATTTTGTAGAGGCAGTATGGGTGAGGGATTAAAAAGGCAAAAGAATTCTACCAGTCATCACTCCCGTCCACCTTCGAATCTAGATCTCTTACTTGACCCAAGGATCAATGTCTACGCTAAAATCACTGCGAACAGAGTTCCAGCAACAGCGATTCCGAATGTCGCCGCTCCACCGATGTGTGACGCTGCTCCAGCTGGGTTGTCGGCCGCCGGTGCTTGGGGTGCAGGTGAAGGCACCTCGATTCCGGTGGGTGAAGGAGGAGAAGCAATGGGTGGAACTACAGGACCACCGGTGGGAGATCCCGAAGGAGTAGGACTGGAGCTTGGAGCTGGGGTAGGAGCAGTAGTTGCCGGAGCAGGGGCAGGAGCTGCTGGGGCCGGTGACGGAGCTCCAGGAGCGGGTGAGGGGGACGCGGGAGCCGGTGAAGGCGATGGTGCTCTGTTTGGCGTCGGAGTCGGAGATGGAGGGAGAGCCACCGGAGAAGGCGCCGGAGTGGCTGGTGGCGGAGTTAGAGGCTGTGAAGAACCCGGTGCCGGCGCTGGAGCCTGAGCCATACATAACCTCGTCAACAAAGCAAAAATCACAACGAATCGAACCCCCGAGAATCCCATCGTCTTTATCGGAAACAAAAAGGAAAAAAGATTTCTTATCAAAACAGAGTATCTCAGAGAAAGATAGTGGAAGTGGAGGAAGCCAAACGACAGCGTTTTTCAAATTCTCTCACAAAGCTCCCTTTGTTTGTTTTGCTTTGTACCCCAATAGCCGGTGGTAAGTCCATATATATAGCCTCTCTCC CAGGGATCGGTGAAGTTTTTAGACTTCTTACATAAACTGCATTTGTTAATTATCAAGCTCTTGAAACTGTTATGAAGCTGTTTTAGGCTGTGATTGAAGTTTTTGTTGATTCTATTGAAGTTTTTGTTGATTCTCTCAACGATTTGCATCAATGTCATTCGAAACAAGGCTTCCTATTGATCATGTCTTAGTTCCTCACTGAATTATGTTTCACTTGTGTGTCTTCTTTCTCGTTTGTACTGTAAAAATCGAAATTGTTCCTCAATACAATTGAAGAAAATACCGAAAGATTTGAACTCCGAATATCAAGTTGATGAGTGTAAACATTTTCCTGACAAATATAAGCTAATGGATGTACGAAAAATTGAAAATTCTTATTCATCTCTAATCCGATATACAAAGAATTCATTTCCAAAACAATAAAAAGGGGGAAAATATGATCAACAGAAGAACAAATCCTCAAAATAATGATGACTATCAAAATTACAATAACAACGATTAAAATAATAATAATAATAACGATCAAATTTTGTAGAGGCAGTATGGGTGAGGGATTAAAAAGGCAAAAGAATTCTACCAGTCATCACTCCCGTCCACCTTCGAATCTAGATCTCTTACTTGACCCAAGGATCAATGTCTACGCTAAAATCACTGCGAACAGAGTTCCAGCAACAGCGATTCCGAATGTCGCCGCTCCACCGATGTGTGACGCTGCTCCAGCTGGGTTGTCGGCCGCCGGTGCTTGGGGTGCAGGTGAAGGCACCTCGATTCCGGTGGGTGAAGGAGGAGAAGCAATGGGTGGAACTACAGGACCACCGGTGGGAGATCCCGAAGGAGTAGGACTGGAGCTTGGAGCTGGGGTAGGAGCAGTAGTTGCCGGAGCAGGGGCAGGAGCTGCTGGGGCCGGTGACGGAGCTCCAGGAGCGGGTGAGGGGGACGCGGGAGCCGGTGAAGGCGATGGTGCTCTGTTTGGCGTCGGAGTCGGAGATGGAGGGAGAGCCACCGGAGAAGGCGCCGGAGTGGCTGGTGGCGGAGTTAGAGGCTGTGAAGAACCCGGTGCCGGCGCTGGAGCCTGAGCCATACATAACCTCGTCAACAAAGCAAAAATCACAACGAATCGAACCCCCGAGAATCCCATCGTCTTTATCGGAAACAAAAAGGAAAAAAGATTTCTTATCAAAACAGAGTATCTCAGAGAAAGATAGTGGAAGTGGAGGAAGCCAAACGACAGCGTTTTTCAAATTCTCTCACAAAGCTCCCTTTGTTTGTTTTGCTTTGTACCCCAATAGCCGGTGGTAAGTCCATATATATAGCCTCTCTCC ATGATGACTATCAAAATTACAATAACAACGATTAAAATAATAATAATAATAACGATCAAATTTTGTAGAGGCAGTATGGGTGAGGGATTAAAAAGGCAAAAGAATTCTACCAGTCATCACTCCCGTCCACCTTCGAATCTAGATCTCTTACTTGACCCAAGGATCAATGTCTACGCTAAAATCACTGCGAACAGAGTTCCAGCAACAGCGATTCCGAATGTCGCCGCTCCACCGATGTGTGACGCTGCTCCAGCTGGGTTGTCGGCCGCCGGTGCTTGGGGTGCAGGTGAAGGCACCTCGATTCCGGTGGGTGAAGGAGGAGAAGCAATGGGTGGAACTACAGGACCACCGGTGGGAGATCCCGAAGGAGTAGGACTGGAGCTTGGAGCTGGGGTAGGAGCAGTAGTTGCCGGAGCAGGGGCAGGAGCTGCTGGGGCCGGTGACGGAGCTCCAGGAGCGGGTGAGGGGGACGCGGGAGCCGGTGAAGGCGATGGTGCTCTGTTTGGCGTCGGAGTCGGAGATGGAGGGAGAGCCACCGGAGAAGGCGCCGGAGTGGCTGGTGGCGGAGTTAGAGGCTGTGAAGAACCCGGTGCCGGCGCTGGAGCCTGA MMTIKITITTIKIIIIITIKFCRGSMGEGLKRQKNSTSHHSRPPSNLDLLLDPRINVYAKITANRVPATAIPNVAAPPMCDAAPAGLSAAGAWGAGEGTSIPVGEGGEAMGGTTGPPVGDPEGVGLELGAGVGAVVAGAGAGAAGAGDGAPGAGEGDAGAGEGDGALFGVGVGDGGRATGEGAGVAGGGVRGCEEPGAGAGA Homology
BLAST of Clc01G18600 vs. NCBI nr
Match: XP_011658485.2 (jacalin-related lectin 34-like [Cucumis sativus] >KAE8647550.1 hypothetical protein Csa_004127 [Cucumis sativus]) HSP 1 Score: 150.2 bits (378), Expect = 1.9e-32 Identity = 99/125 (79.20%), Postives = 103/125 (82.40%), Query Frame = 0
BLAST of Clc01G18600 vs. NCBI nr
Match: XP_022132682.1 (merozoite surface antigen 2-like [Momordica charantia]) HSP 1 Score: 131.0 bits (328), Expect = 1.2e-26 Identity = 96/147 (65.31%), Postives = 103/147 (70.07%), Query Frame = 0
BLAST of Clc01G18600 vs. NCBI nr
Match: KAG7034220.1 (hypothetical protein SDJN02_03947, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 116.7 bits (291), Expect = 2.3e-22 Identity = 92/132 (69.70%), Postives = 98/132 (74.24%), Query Frame = 0
BLAST of Clc01G18600 vs. NCBI nr
Match: KAG7026860.1 (hypothetical protein SDJN02_10867, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 84.0 bits (206), Expect = 1.7e-12 Identity = 71/137 (51.82%), Postives = 76/137 (55.47%), Query Frame = 0
BLAST of Clc01G18600 vs. ExPASy TrEMBL
Match: A0A6J1BUI4 (merozoite surface antigen 2-like OS=Momordica charantia OX=3673 GN=LOC111005482 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 5.8e-27 Identity = 96/147 (65.31%), Postives = 103/147 (70.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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