Clc01G15780 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGAGCAGGGTCCACCGAAGCATTTCTAGCAGAGCTTCCCCTCCGCTTTCCCATAGACGCCTCCTTTCTCAAACCAGGGATCCCTCTTCATATAATCTGACTTCCAATCCTCAATCCATTATTCATCGAACCATCCGAACAAAGCCGCAATCTGAGCTCCCACCATGGCTCTCTCTTCTCGTCTCTTGTCCAAATCCAACCAGGTTCGCCCTTTTCCGCCCTGGATCGCCTCAGTATACCCTACTTTTCACTCTCTCTGATTCTTCATGTTTCATATCGTTTTTTGTTGCTGTGTTGATTTTTGTTCTTCCGTTTTCTATTCGGAACTGGAACTTGTTATTGCCGAATACTCTTATGGATCCTGAAAATGGTGAAAGCTTTGTCAATATCTCCCTCCCCGTAATTCGATTTTTAATTCTTGGCTTTTTATAATTTGTTGCTTTCTGATGGTTTCGGGATCTGGGATTTTAGGCTTTCTTTGGATGATGATGTAAAGTATGTAGGTTGTTGTGGATTTTTCTAACATTAGTGAGGCTTCGTTAAAGATTTTGAATGTTAGACGCATTGTTTGGAAATGGTAGTCTGTGCGTAGTGGGAAAGTGTTTTCCTAATTTATGTTGCCTAGAGGCGGGATGATCATTGAATCAGCTGCTTAACGTGGGTTTTTTTGCCCTTTCGTTGTTACAGGTGCTTGGCAGTCAAAGTATCTTACACCAGGGGCATGCTATTCCTGTTCGTCACTTTGCAAAAGAGGCTGCTCGGCCTGCTCTGAAGGGAGATGGTGAGGCAAAATACGCTCAATTAGTGAGAAAGTGAGAGAGAGAGAGATATGAAGTTTGGTTTATGTCTATCACACAGTTGTAGTTATGTCTTTAAGGAATCATGGATAAATTATGTAGAGAATTGCATCAGAAATATATATATATAAAGGCTATGAAGCGACATGAGTGAATTATCGACTTCTCTATGTGCAAATTTATCTTGAATTTTCTGTGATTTAATTAATAATGTTTTTTTTTTTTTTTTTTTCTCTGTGGGTGCCAAAGAAATGCTGAAGAACATATTTTTGGAAGTGAAAAAGAAGTTTGAGACAGCATTGGATGTTTTCCGAAAAGAGAAGATCACAATTGATCCAGATGATCCTGCTGCTGTAGCTCAATACGCTAAGGTCATGAAAATGGCAAGAGAGAAGTAAGTGTTTTTGCATGATTACCACATTTTCTAGTTAAATCCTCTACGGCTACTTGTGGGTTGAGCCCTATCATTCTCTGTGCAATTAACTGGTGCTGAGGTACCTGGGTCATTTTATCTTTCGAGTATATTAATCAAATACCCCTGCCTCAATTTATACTGACTAGCTCAAAAGTAATTAGCTAATGTACGATGAAAATTATGGGCTATTGAATTTTGTGCATCTACAGTCGTATCTATCACCACTTACTTACACATTAACGTTTGGCCTCTTCTGTTTTTAGTTACTTCTTTTGAGGGTCCTTGTCCTTCCTATACACTTTGCTTAATGAAATTCACTCTCTGCATTCTGTGCAATTTGTTTGGAACAATTTTGTTCTAGGTGAATTAAAGGATCATTGCTGGAGAGTGATAGCATGATAATCATAAATATTTCTCAGGGACTCACAATTTGGTGGTTATATATTTTTTTTGTGGCCGATAAACTGGAGATGAAGTTAAAATTAATCAATAATAGGAAACAAGTATTTCATGGCTTTGACTATTAATTAAGCGGGGAAACACTAATGTCATTTTTGTTCAATGTACAACATACCATTTTCTATGAGAATAGCTTCCGTGAACGGTATGTATAGAGTTCTTATTTATTGCTGCATTTTTCGAGGCATCCTCTTAGCTTTCATCTCTCCTCATTCAAATATAAAACTCTAAGTACAACCTATGAAACAGATGTTGTTCAAGTAAGGTCGTCATTAAAATATAAGTTGTTTTCACATAACATAGGACCATGTGTACATATTAGTACATGCTATTACAAAAATATGTGCATGTGAATATCTGTGAGTTACAATCTTAACCCTCTTGTTTCTTCCTCGCAGGGCAGATTTATTCTCAGAAGCACAGCGAATCAAATACACCATTCAGACAAGAACCCAAGACATCCCTGATGCCAGATCATACTTGCTGGCACTGAAGGATATCCGGATTAAGTATGTTCCTCTTTCACGAACTTGGATTCCTTGTCAACCTGAGCAACGCATGATCAACATTTCTCCCTTGGCATACTAACAGTTTATTTGATTTTCAAGGGTTCCAAGATTGACAAGACTTAGAAACTTGGACCAGTATTGATCAATGAAGGCTTGAAAAACCCCACCGAAAGTCCTTTTTTTAATTTTTTAAATTATTTTTTAAACACCATGGAAACTGAACAAATCTCCAAGTCCCCAGTACATGTTGTATAAAAGCTAAAACTTACTAATCACAATCTCAAAATGGCTTAGACCTTAGTTGTTTTTTTACCTGTCTTGTTCAATTTTCATGTCAACTTGTACAGACTTTTTGGCCTTCTAATATATTTTGGGGGTATGTATTGCCCATGCATCCATTCTTATTCCTGAAACCTGTGGCATTGATCTGATGCCTATTGCCAAGTGCATGAGTTTGTTGTTATATTGTACACTTGGTTTTGTGACTTTATTCTTATGTACCTTTTCAGGAGAGGTCTCACTGACGACCTTGGTGCAGAAGCTATGATGTTTGATGCTCTGGAAAAGGTTGAGAAAGAATTGAAGAAACCTCTCTTGAGGAATGACAAGAAAGGAATGTCTATTCTTATGGCTGAGTTTGACAAAATCAATCAAAAGTATGATTCTAACCTTTTATATTTTGTTTTACCAAAAAAGTTTAGTGATTTGTTAACAGACGTTTATGTTGCCATGCTCAACATAATCTAAGATTGCTATTGAAAACAAAATGTCTTGTCAGAAAATAGAAGCTTTTGCACTCCCATTTTGGATAAATGATGAGTTTATCAGGCTTCCATTTCTGAAATACTAGTGAAGAATGATAATCATTTTTATTAGTCGTGCATTTGCGTGTCTATTTGGTATCAGAGCTGGTCGCTTGCGTGTCTCTTTGGTATCAGAGCTGGTTGCACCTGGCAGTGAACCAAAACATGCCTTTTAGATTTCTTTTCTTTTATCAAAGAAAAAAAAGATGACCATTAGATTTCTCTATTTCTCTTAGACACTAGCTTTTACCAATCTAAATTTCTGACAGAGATTCAGGATAGTTGGTAGCTCCTACCTGCATACAGTTGAACAATCTTTCTTTAGGATATATAGAGTATTCTGAGTATATTGTTTAATTCTTTTTCCCCCCAATCAGGCTTGGGATTCGAAGGGAAGATCTGCCCAAGTACGAGGAGCAGTTGGAACTTAAAATTTCCAAGGCACAGTTGGAAGAGCTGAAGAAAGATGCTGTTGAGGCAATGGAAACTCAAAAGAAGCGGTATGTGGTTGATTATTATACTGCAAAAAACATAGTCTCAGTATCGATAGTCTAGTTAATCAGCAGACGTGTCTGTGCTGCTTTATATTGGTGTGCTGCCTTCTTTTCCGTAGTTTGGATGAAACAATCGCCATTGATCAGCCGGATAGATATATAGATAAGGGCTAAAAGAATTTTGTTCTCAAAAAGTATAACCTAGCTTGTATTTGGTTGGCATTACCGTAGATCTGTTGGCTCTCATCAAATCCTTATTGAAACTTATGCGACTTTTTCCCCCTTTGTTTTCAGTGAGGAGTTTAAAGACGAGGAAATGGTGGATGCGAAGTCGTTAGACGTGAGAAACTTCCTGTAGATTTTCAAATCATTTTTCTTTTGTTTTCTGGTTGAGAAGAATCTGTCAACAGAACTGAGTCGGCTGTCTATGAACACCGGGATACATCTCTTTAGCTTTAATAAGAAAAGCACCTCTGATATTGGGAGTGCATCATTTGGCTGATGTGTGTTCCCAACTTTTTATTTTATTTTATTTTTCTTTTTTTGTAATTCATCCTACTATGTTACATTGCCAGGTGATAACTGGATGGATATTGTCAAGAAATTTTCATTCCATCATTTGGCTGATGTGTTCCCAATTTTTTTGAGCTATGTTTGGTTTTAGCTTATTTGCTCTAATTAATTTCATGTAGCAAAGTGTC ATGAGGAGCAGGGTCCACCGAAGCATTTCTAGCAGAGCTTCCCCTCCGCTTTCCCATAGACGCCTCCTTTCTCAAACCAGGGATCCCTCTTCATATAATCTGACTTCCAATCCTCAATCCATTATTCATCGAACCATCCGAACAAAGCCGCAATCTGAGCTCCCACCATGGCTCTCTCTTCTCGTCTCTTGTCCAAATCCAACCAGGTTCGCCCTTTTCCGCCCTGGATCGCCTCAGTATACCCTACTTTTCACTCTCTCTGATTCTTCATGTTTCATATCGTTTTTTGTTGCTGTGTTGATTTTTGTTCTTCCGTTTTCTATTCGGAACTGGAACTTGTTATTGCCGAATACTCTTATGGATCCTGAAAATGGTGAAAGCTTTGTCAATATCTCCCTCCCCGTGCTTGGCAGTCAAAGTATCTTACACCAGGGGCATGCTATTCCTGTTCGTCACTTTGCAAAAGAGGCTGCTCGGCCTGCTCTGAAGGGAGATGAAATGCTGAAGAACATATTTTTGGAAGTGAAAAAGAAGTTTGAGACAGCATTGGATGTTTTCCGAAAAGAGAAGATCACAATTGATCCAGATGATCCTGCTGCTGTAGCTCAATACGCTAAGGTCATGAAAATGGCAAGAGAGAAGGCAGATTTATTCTCAGAAGCACAGCGAATCAAATACACCATTCAGACAAGAACCCAAGACATCCCTGATGCCAGATCATACTTGCTGGCACTGAAGGATATCCGGATTAAGAGAGGTCTCACTGACGACCTTGGTGCAGAAGCTATGATGTTTGATGCTCTGGAAAAGGTTGAGAAAGAATTGAAGAAACCTCTCTTGAGGAATGACAAGAAAGGAATGTCTATTCTTATGGCTGAGTTTGACAAAATCAATCAAAAGCTTGGGATTCGAAGGGAAGATCTGCCCAAGTACGAGGAGCAGTTGGAACTTAAAATTTCCAAGGCACAGTTGGAAGAGCTGAAGAAAGATGCTGTTGAGGCAATGGAAACTCAAAAGAAGCGTGAGGAGTTTAAAGACGAGGAAATGGTGGATGCGAAGTCGTTAGACGTGAGAAACTTCCTGTAGATTTTCAAATCATTTTTCTTTTGTTTTCTGGTTGAGAAGAATCTGTCAACAGAACTGAGTCGGCTGTCTATGAACACCGGGATACATCTCTTTAGCTTTAATAAGAAAAGCACCTCTGATATTGGGAGTGCATCATTTGGCTGATGTGTGTTCCCAACTTTTTATTTTATTTTATTTTTCTTTTTTTGTAATTCATCCTACTATGTTACATTGCCAGGTGATAACTGGATGGATATTGTCAAGAAATTTTCATTCCATCATTTGGCTGATGTGTTCCCAATTTTTTTGAGCTATGTTTGGTTTTAGCTTATTTGCTCTAATTAATTTCATGTAGCAAAGTGTC ATGAGGAGCAGGGTCCACCGAAGCATTTCTAGCAGAGCTTCCCCTCCGCTTTCCCATAGACGCCTCCTTTCTCAAACCAGGGATCCCTCTTCATATAATCTGACTTCCAATCCTCAATCCATTATTCATCGAACCATCCGAACAAAGCCGCAATCTGAGCTCCCACCATGGCTCTCTCTTCTCGTCTCTTGTCCAAATCCAACCAGGTTCGCCCTTTTCCGCCCTGGATCGCCTCAGTATACCCTACTTTTCACTCTCTCTGATTCTTCATGTTTCATATCGTTTTTTGTTGCTGTGTTGATTTTTGTTCTTCCGTTTTCTATTCGGAACTGGAACTTGTTATTGCCGAATACTCTTATGGATCCTGAAAATGGTGAAAGCTTTGTCAATATCTCCCTCCCCGTGCTTGGCAGTCAAAGTATCTTACACCAGGGGCATGCTATTCCTGTTCGTCACTTTGCAAAAGAGGCTGCTCGGCCTGCTCTGAAGGGAGATGAAATGCTGAAGAACATATTTTTGGAAGTGAAAAAGAAGTTTGAGACAGCATTGGATGTTTTCCGAAAAGAGAAGATCACAATTGATCCAGATGATCCTGCTGCTGTAGCTCAATACGCTAAGGTCATGAAAATGGCAAGAGAGAAGGCAGATTTATTCTCAGAAGCACAGCGAATCAAATACACCATTCAGACAAGAACCCAAGACATCCCTGATGCCAGATCATACTTGCTGGCACTGAAGGATATCCGGATTAAGAGAGGTCTCACTGACGACCTTGGTGCAGAAGCTATGATGTTTGATGCTCTGGAAAAGGTTGAGAAAGAATTGAAGAAACCTCTCTTGAGGAATGACAAGAAAGGAATGTCTATTCTTATGGCTGAGTTTGACAAAATCAATCAAAAGCTTGGGATTCGAAGGGAAGATCTGCCCAAGTACGAGGAGCAGTTGGAACTTAAAATTTCCAAGGCACAGTTGGAAGAGCTGAAGAAAGATGCTGTTGAGGCAATGGAAACTCAAAAGAAGCGTGAGGAGTTTAAAGACGAGGAAATGGTGGATGCGAAGTCGTTAGACGTGAGAAACTTCCTGTAG MRSRVHRSISSRASPPLSHRRLLSQTRDPSSYNLTSNPQSIIHRTIRTKPQSELPPWLSLLVSCPNPTRFALFRPGSPQYTLLFTLSDSSCFISFFVAVLIFVLPFSIRNWNLLLPNTLMDPENGESFVNISLPVLGSQSILHQGHAIPVRHFAKEAARPALKGDEMLKNIFLEVKKKFETALDVFRKEKITIDPDDPAAVAQYAKVMKMAREKADLFSEAQRIKYTIQTRTQDIPDARSYLLALKDIRIKRGLTDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQKLGIRREDLPKYEEQLELKISKAQLEELKKDAVEAMETQKKREEFKDEEMVDAKSLDVRNFL Homology
BLAST of Clc01G15780 vs. NCBI nr
Match: XP_038881119.1 (probable ATP synthase 24 kDa subunit, mitochondrial [Benincasa hispida]) HSP 1 Score: 419.5 bits (1077), Expect = 3.0e-113 Identity = 222/230 (96.52%), Postives = 227/230 (98.70%), Query Frame = 0
BLAST of Clc01G15780 vs. NCBI nr
Match: XP_022132532.1 (probable ATP synthase 24 kDa subunit, mitochondrial [Momordica charantia]) HSP 1 Score: 414.8 bits (1065), Expect = 7.4e-112 Identity = 218/230 (94.78%), Postives = 226/230 (98.26%), Query Frame = 0
BLAST of Clc01G15780 vs. NCBI nr
Match: XP_008440128.1 (PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial [Cucumis melo] >TYK12972.1 putative ATP synthase 24 kDa subunit [Cucumis melo var. makuwa]) HSP 1 Score: 408.7 bits (1049), Expect = 5.3e-110 Identity = 216/230 (93.91%), Postives = 225/230 (97.83%), Query Frame = 0
BLAST of Clc01G15780 vs. NCBI nr
Match: XP_022977838.1 (probable ATP synthase 24 kDa subunit, mitochondrial [Cucurbita maxima]) HSP 1 Score: 408.3 bits (1048), Expect = 6.9e-110 Identity = 215/230 (93.48%), Postives = 224/230 (97.39%), Query Frame = 0
BLAST of Clc01G15780 vs. NCBI nr
Match: XP_004141966.1 (probable ATP synthase 24 kDa subunit, mitochondrial [Cucumis sativus] >KGN48421.1 hypothetical protein Csa_003064 [Cucumis sativus]) HSP 1 Score: 407.9 bits (1047), Expect = 9.0e-110 Identity = 215/230 (93.48%), Postives = 224/230 (97.39%), Query Frame = 0
BLAST of Clc01G15780 vs. ExPASy Swiss-Prot
Match: Q9SJ12 (Probable ATP synthase 24 kDa subunit, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g21870 PE=1 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 2.9e-87 Identity = 164/234 (70.09%), Postives = 201/234 (85.90%), Query Frame = 0
BLAST of Clc01G15780 vs. ExPASy TrEMBL
Match: A0A6J1BU34 (probable ATP synthase 24 kDa subunit, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111005367 PE=4 SV=1) HSP 1 Score: 414.8 bits (1065), Expect = 3.6e-112 Identity = 218/230 (94.78%), Postives = 226/230 (98.26%), Query Frame = 0
BLAST of Clc01G15780 vs. ExPASy TrEMBL
Match: A0A5D3CNN3 (Putative ATP synthase 24 kDa subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005690 PE=4 SV=1) HSP 1 Score: 408.7 bits (1049), Expect = 2.6e-110 Identity = 216/230 (93.91%), Postives = 225/230 (97.83%), Query Frame = 0
BLAST of Clc01G15780 vs. ExPASy TrEMBL
Match: A0A1S3B0D0 (probable ATP synthase 24 kDa subunit, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103484687 PE=4 SV=1) HSP 1 Score: 408.7 bits (1049), Expect = 2.6e-110 Identity = 216/230 (93.91%), Postives = 225/230 (97.83%), Query Frame = 0
BLAST of Clc01G15780 vs. ExPASy TrEMBL
Match: A0A6J1IR90 (probable ATP synthase 24 kDa subunit, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111478016 PE=4 SV=1) HSP 1 Score: 408.3 bits (1048), Expect = 3.3e-110 Identity = 215/230 (93.48%), Postives = 224/230 (97.39%), Query Frame = 0
BLAST of Clc01G15780 vs. ExPASy TrEMBL
Match: A0A0A0KKY9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486940 PE=4 SV=1) HSP 1 Score: 407.9 bits (1047), Expect = 4.4e-110 Identity = 215/230 (93.48%), Postives = 224/230 (97.39%), Query Frame = 0
BLAST of Clc01G15780 vs. TAIR 10
Match: AT2G21870.1 (copper ion binding;cobalt ion binding;zinc ion binding ) HSP 1 Score: 323.6 bits (828), Expect = 2.1e-88 Identity = 164/234 (70.09%), Postives = 201/234 (85.90%), Query Frame = 0
BLAST of Clc01G15780 vs. TAIR 10
Match: AT2G21870.2 (copper ion binding;cobalt ion binding;zinc ion binding ) HSP 1 Score: 293.5 bits (750), Expect = 2.3e-79 Identity = 149/214 (69.63%), Postives = 183/214 (85.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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