Clc01G14770 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGAAATTCCATCCGTACCTAGAAGAATGATGTTTTGTCCAACGAACGACGGACTGAGTAAACTGGTGTTCTTATGCCCCTGGTAAAACTGGCTCAAATTCACCGTACTGAACCGCTGATCTTCGTAGAAGGCGTTAACCTCAATAGCGTCGTAGTAGATCCCGATCCTCCGATTCGGATTTCTGGCGGTGATATTCAGAGCGAGATTGTAATGGAGGTTGTTATTGTTAGGCGTAGTGAGATTGAACTGCGTGAGAGAGGCGTCGGTGGCGTGGAATTGGAGGAGATTTGGACGGAAGATGAGCCACAAGAGGAAGACAGCAATGCCGAGGACGATGACGATGGTGATGATGATTTGACAGATGAGGTTGAGGATACAGCCGCAGCAGCAGTTGCAGAGGCAGCCGAGACAGCCGCAACAGCCGCAGCCGCCGTCGCCGCGGCCAGGGCGGTGGTAGGACTTGGAGGAGGGAGGAATGGAAGGGCCATAGTAAGCTCCGTTGAGATGGGACGCCATTGTTGAAGAAGAGAGTGAAGAGAAAAGAGGGGAATTCGGGGATATAAATTAGGGTTTGAAGTTTTGAAAGGAAGGTTGTTCTGATAATGATTTGAAAGCGCGGAAAAGAAAAGGAGTTTATGAGTCAAATTAAACGCGGATTTTTTATTCGCC CGAAATTCCATCCGTACCTAGAAGAATGATGTTTTGTCCAACGAACGACGGACTGAGTAAACTGGTGTTCTTATGCCCCTGGTAAAACTGGCTCAAATTCACCGTACTGAACCGCTGATCTTCGTAGAAGGCGTTAACCTCAATAGCGTCGTAGTAGATCCCGATCCTCCGATTCGGATTTCTGGCGGTGATATTCAGAGCGAGATTGTAATGGAGGTTGTTATTGTTAGGCGTAGTGAGATTGAACTGCGTGAGAGAGGCGTCGGTGGCGTGGAATTGGAGGAGATTTGGACGGAAGATGAGCCACAAGAGGAAGACAGCAATGCCGAGGACGATGACGATGGTGATGATGATTTGACAGATGAGGTTGAGGATACAGCCGCAGCAGCAGTTGCAGAGGCAGCCGAGACAGCCGCAACAGCCGCAGCCGCCGTCGCCGCGGCCAGGGCGGTGGTAGGACTTGGAGGAGGGAGGAATGGAAGGGCCATAGTAAGCTCCGTTGAGATGGGACGCCATTGTTGAAGAAGAGAGTGAAGAGAAAAGAGGGGAATTCGGGGATATAAATTAGGGTTTGAAGTTTTGAAAGGAAGGTTGTTCTGATAATGATTTGAAAGCGCGGAAAAGAAAAGGAGTTTATGAGTCAAATTAAACGCGGATTTTTTATTCGCC ATGCCCCTGGTAAAACTGGCTCAAATTCACCGTACTGAACCGCTGATCTTCGTAGAAGGCGTTAACCTCAATAGCGTCGTAGTAGATCCCGATCCTCCGATTCGGATTTCTGGCGGTGATATTCAGAGCGAGATTGTAATGGAGGTTGTTATTGTTAGGCGTAGTGAGATTGAACTGCGTGAGAGAGGCGTCGGTGGCGTGGAATTGGAGGAGATTTGGACGGAAGATGAGCCACAAGAGGAAGACAGCAATGCCGAGGACGATGACGATGGTGATGATGATTTGACAGATGAGGTTGAGGATACAGCCGCAGCAGCAGTTGCAGAGGCAGCCGAGACAGCCGCAACAGCCGCAGCCGCCGTCGCCGCGGCCAGGGCGGTGGTAGGACTTGGAGGAGGGAGGAATGGAAGGGCCATAGTAAGCTCCGTTGAGATGGGACGCCATTGTTGA MPLVKLAQIHRTEPLIFVEGVNLNSVVVDPDPPIRISGGDIQSEIVMEVVIVRRSEIELRERGVGGVELEEIWTEDEPQEEDSNAEDDDDGDDDLTDEVEDTAAAAVAEAAETAATAAAAVAAARAVVGLGGGRNGRAIVSSVEMGRHC Homology
BLAST of Clc01G14770 vs. NCBI nr
Match: KAA8516802.1 (hypothetical protein F0562_017088 [Nyssa sinensis]) HSP 1 Score: 70.1 bits (170), Expect = 1.8e-08 Identity = 59/142 (41.55%), Postives = 81/142 (57.04%), Query Frame = 0
BLAST of Clc01G14770 vs. NCBI nr
Match: CAD1817939.1 (unnamed protein product [Ananas comosus var. bracteatus]) HSP 1 Score: 65.9 bits (159), Expect = 3.5e-07 Identity = 56/130 (43.08%), Postives = 74/130 (56.92%), Query Frame = 0
BLAST of Clc01G14770 vs. NCBI nr
Match: KAF5473491.1 (hypothetical protein F2P56_010099 [Juglans regia]) HSP 1 Score: 62.8 bits (151), Expect = 2.9e-06 Identity = 55/145 (37.93%), Postives = 85/145 (58.62%), Query Frame = 0
BLAST of Clc01G14770 vs. NCBI nr
Match: KCW49000.1 (hypothetical protein EUGRSUZ_K02613 [Eucalyptus grandis]) HSP 1 Score: 61.2 bits (147), Expect = 8.6e-06 Identity = 50/118 (42.37%), Postives = 72/118 (61.02%), Query Frame = 0
BLAST of Clc01G14770 vs. NCBI nr
Match: KAE8021745.1 (hypothetical protein FH972_007610 [Carpinus fangiana]) HSP 1 Score: 56.2 bits (134), Expect = 2.8e-04 Identity = 34/83 (40.96%), Postives = 53/83 (63.86%), Query Frame = 0
BLAST of Clc01G14770 vs. ExPASy TrEMBL
Match: A0A5J4ZGS4 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_017088 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 8.9e-09 Identity = 59/142 (41.55%), Postives = 81/142 (57.04%), Query Frame = 0
BLAST of Clc01G14770 vs. ExPASy TrEMBL
Match: A0A6V7NH64 (Uncharacterized protein OS=Ananas comosus var. bracteatus OX=296719 GN=CB5_LOCUS1150 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 1.7e-07 Identity = 56/130 (43.08%), Postives = 74/130 (56.92%), Query Frame = 0
BLAST of Clc01G14770 vs. ExPASy TrEMBL
Match: A0A059A6N3 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K02613 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 4.1e-06 Identity = 50/118 (42.37%), Postives = 72/118 (61.02%), Query Frame = 0
BLAST of Clc01G14770 vs. ExPASy TrEMBL
Match: A0A5N6QYV1 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_007610 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 1.3e-04 Identity = 34/83 (40.96%), Postives = 53/83 (63.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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