Clc01G13840 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G13840
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	RING-type E3 ubiquitin transferase
Location	ClcChr01: 26707552 .. 26721373 (-)
RNA-Seq Expression	Clc01G13840
Synteny	Clc01G13840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCGGCCATGGCAATCACAGGCTGAAACTCTCCATCTTCCACCACCGATCTTCCTCAGACTCCAAACCCGAACGCCCAAAAGAGTATCCCGAAGAGTACCTCTGCCCAATTTCTAAGTCTTTAATGGCGGACCCAGTTGTCGTCTCCTCTGGTCACACCTTCGAGCGTCTCTCTGTTCAAGTTTGTCAAGATTTGGGGTTTTCGCCCAAGCTTGAAGAAGATGGTTCAAGGCCGGATTTCTCCTCTGTTATTACCAACAGAAACATGAGATTCACTATTCTCAAATGGTGCGATAATAACGGAATCGAACATCCACAACCCCCTGATTACAGCTCCATTGAACTCATTGTTCGTCGATTAATGGAGAAGCAGAGGCAGGAGAATCGATTCGAAGCTTCTGATAGCGAGTTGATTAGGGGCGTCGCCGATAAACCGCAGGGAGTTGCTGTTCATGCGACCACCGAGGTTGGGCTACGACTCAACCGATTTCAACTCGACTCGCCGCCGCAGAAGGAGGAGATCGTACGAGAAAGTACTATTTTGCCCTTCAAAACGCAACCCTCTAGTTATGCTGCTCATTCTTCTTCCTCTTCCCATGGAAGCTTCGATAGAGATCCTAATCACAGAGGATATTCTGATTCGTATTCCCCAAATTCAGAAGAAGAATCTATACTCATTTTGAAATTCAGAAGCAACGATGAATTCGAGCAACGAGAAGGAGTGATATCCCTAAGAAAATTAACTAAATCCAACGAATCGATTAGGGTTTCTTTATGCACAAAGGAATTCCTCGCCGCCCTACTTCCTTTGGTTTTGTCCCGATCTACAAATATCCAGATCAACGCAGTAGCTTCCGTCGTGAATCTCTCTCTCGAGAAACCCAACAAATTGAAGATCGTACGGGCAGGATTTGTTCCGCCATTAATCGACGTTTTAGACGGCAGAAGCGCCGAAGCTCAAGAACACGCCGCCGGTGCTCTGTTCAGTTTATCGTTAGACGACGAGAACAAAATGGCGATTGGAATTCTCGGCGCGTTACCGGTGCTGATGAATACGCTCCGAGCCGACAGCGAGAGAACGAGGAACGATTCAGCTCTTTGTTTGTACCATTTGACACTAAACCCTAGCAACCGAGTTAAACTGGTGAAACTCGGCGCCGTACCGATTCTGCTGTCGTTGACGAGAATCGAAGGTTGTGCGAGCCGAATACTTCTGATTCTGTGCAATATCGCGGCCTCTGTGGACGGGAGATCGGCGATGCTGGATGCGAATGCGGTGGGTTGTTTGGTGGAGATATTGAAGGAGAAGGACATTGATTCCGAGTCGACTCGGGAGAATTGTGTGGTGGCGCTTTACGCACTGAGTCAAGGAGGATTCCGATTCAAAGGATTGGCGAAGGAGGCCGGCGCGGTGGAGGTTCTGAGAGAGGTTGAAGAGAGGGGAAGCGAGCGGGCAAGGGAAAAAGCCAAGAGGATTTTGCAGATGATGAGAACCGGCGGAAGCGGTTCGGTCGAGATTGAAGGCGTCGGCCGAAATGGGCTCGACGCTGGTGGAGTCAGCTGGACCGGTCGGGTTGGTGCTGGCTTGAACCGGTACTCTACAAATACCACTAAGTTTTGATTTGAATTTTTCTTTTCCTTCTTTGAAAGTGAATTTTATTTTTAGGACTTATTTATTTGTATAGTTATTTATTAATGTCTAAAGGAAGAAATGAAAATTGTTATCACTTTCGGAAACAATTTTGTTTTAGTTTTTTTTTTTGCAATTTCTTACAATCATTTTTAACTTTTTTTGGAAACATTTAAATTCAATATTTAAAAAACACTTTTAAAAAATTACAACTATACAATTATATTATTTCTTTTTTTCTATACAAAGGTATTAACGTGAGTGGAGGAATCAAATCTAAAATTTAGAGGTTGATTGTACAAACACTAGGAAATATATTTTATTTTTTAAAATCAAGCTTATAAATACTACTTCTACTTATAATAAGTTTATTTGTTTTTTTTATCTATTTTTCACCAATGTCTTTAAACTTCAACTTAGAATTCAAGTTTTTCTTCTAGCAATATGAAAACTATAATATGAAATTTGTGAGAAAACAACCATAGCTGTCAAAAACTGGAAACTAAAAGCAAAATCACTAAAAAGAATAATTTTTAGAAACCTAAATTTTTGTAATATGTCTAAGAATCTAAATGTGTTTTTAAAAGTGTGTTTAACTCGAAAAATTAGAGTTGTAAAAAGCAAGATTATTTGGTTTGAGAACTGTGTAGGTTTCACAATTAAAAAACATCAATTTTATGTCTTACTAACTCCTTACACTATATGTCATACAATTAAAAAAATTTTGTAACTCAAATTTTACATTTTACTCCTTACCCTGCGATGAAACAAAAAAATGATTATTAAAAAAAAGAAAAAAAAAAAGAACATAGATCTAATCGTGACAAATGGTTTGTGGAGGAATTTTGGCGTTGGCGGGTACGGTGGGGCAAATTATTGGTGGATGTGGATCTATTTTATCACCTTATTTTGTTTGTTTCTGAAAAAAAAAAAAAAAAAAAAAAGAAAAAATCTTATTTTGTTTAGCTTTCAATTTTCGTCCTAATTTTTTTATTTATGGAATGGATTGATTTTTCATATTTGCTATCAGCTGTATGGGTAAACTGTAAAAAAAGGAAAAGAAATAACTAAAAGTATTAGGATTTGGGGTTATTTTAAACAATAATGTTATTTTTAAAAAAAATTCGAAAAATAGGGTGCTTTAGAAACTAATGACAAAAGTAGGGTGGTTTGGAAAATAATTTGTAAATTGGGGTGGTGAAATCGTGTACCGGGTACACGATTTCAGTCAATTTTTTTCGTGGTCATTGTCATGTAAGTAAGTCGTGGACCGGGTCCACGAGTGTTGACCAAACTCGTGGACCGGGTCCACGATTTCGGCCGAAATCGTGGACCGGGTCCACGAGTTCGCCCATACTCGTGGACCGGGTCCACGATTTATGCCAAAATTATCATGCTACAATCGCGGGGAAGGAGGAACGAGCAGTTTACGCTTTAGTAGCTACCGTTTCAGCTCTAGTATTCACAGGCTTTCAAGGAATGGAATATTATCAAGCACCCTTCACTATTTCAGATAGTATTTATGGTTCGAGTTTTGATCAAAAAGACTTCTTACCCCCGTTCTTTTCTCATGATACGTCCAAAAACGTCCGGTTTTTTTCCCATGATAAATAAGTTAATTAATTAATTACCCACTTAAATGAAATTTTGCTTATTACTTGTGTTCATCAATTATTGTTTAGTTTCATTGATTCTTAATTTTTAAAAATGTAATGGAAAATCATTAATTCATTTAGTTAAAGATAAAAAGTTAATACAAATCAGAAAATTTAAAATACAAATCAAGTGCCACATGGTGGTCTTCTTCGCGCACGTTGTCCACGACGAGGCACAGGCACTTCAATTTGTTGTTGCTGGTGGATTACATCGTCGATATCCTGTTGGGTGACGACAGATGGAAATTCATGGTGTCCATAATATTCCTGTTGATGGCCAGAACCGGATGCAATGTCTGGTTGTAATATGGGAGGTTCCTGGTCATCGGGTTGCTCTGGAACACCTTCGTCACGTTGTCTCTGTCGTCTACGACGAATACGTTTTCGATCAGTATCAGCAACATTGAGCCTCCTTGTATGTTGAATGATTTCTTCAACATTTACCATGTTTTGCTCACACATTGAACTCAACTCTGGTAAATTGTGTTCTAAGGAGTAATTGTGCACATCGTGGACAAAATTATTCTGCACGATAAAAAAAAAATATAAGTATAAAAGAATATTCTTAGCATGTAATTGAAAAACACTACATAATAAGATGCTTACCATGCAGTAATAGTAGGCACCGTCAGGTGTAATAAATCTTCTTGTGATAGAGTCGTACCAGGACAAATAATCATTAGACACATCCGACTCGTTTATTATTTCTCCTTGTGCACAGCGGCCATGACGTGCACGCCAAAATGATATATACTCTGCATGAATTTGACGCCAGTTTTGGTCGTGTTTACCTCTTAAATCAATTTGGTGTAGTTGAGGGAGTGTATTACACAATGTCGGTACTGTTTGCCGCATACCGAATTGTCTCAACACTCGATCTGGTTGATGCCACTCTACGATGTGAAAGCATATAAGTGGGCTGACCGTCAACCAAATGTCTTGTCCATCATGACAGTAATCAGGCAACAACGACATAACGTGTGGTGTATATGGCGTCCAATTAATCTGAAACCATGTACAAGAATAATTAGAACCTAAAAACATATGTAATATTCAGTTATATGCAACATATTTATTATTACCTGATTTTTCATCAAACGGTCAAAAATTGAGCGATATACCAGCAACATGTTTGCTGATTGTTCAGATGCAGCTAATACACCGCTCCATCTATCACATGGATATAAAACAATTAAATACTTTGCTAATTGTATTGACAAAGAAATTAATATATACAGAAAGTAATACCTGGCACTGAGTGGACGTCCTATGAAATGTTCGGGAGGTTGTAGTTGGACTTGTGGTGCAACAATGCTAAATCGATCGTAGGCCCATACTTGAAGTAGTATCAGTGGGCCTGCTATATCCAAAGCTTGTGCATGACTGGCTCGACATAATTCTCTGTACAGCCATGCAAGACAAGCACCACCCCACGAATAATTACCAGCTTGCTCAAAACTGGCCAGTAGTGGGAGGAACATTAAGTGCACCAACGTGTTGGACTTGTCAGCAAACAGAAAGCCTCCGATAAGCTGCATAATATATGCTCGTGCATACCTCTGTATACTGACGTCATCGGCATCAGGAGACAATTCTGTAAACTGAGACGCTAACCACGGGAGACTTAACCTTGAGCCTTTTAAGTCAAGTGGTCGAACGCCTAAGAAATCTTCACAGATCTGTTTCCAATCATGCTGCAACGAACCAGTAACAGGTTCTCCGTCCACTGGTAGTCCAAATTGTACTGCAATGTCCTGCAGCGTAATGGTGCATTCCCCACCAGGCATATGAAATGTGTGGGTCTCCGGTCTCCAGCGCTCTACTAAAGCAGTAATGAGGTGCCAGTCCAACTGTATGAATCCAATTTGTGCAACCCCAATAAAACCGGCCTGTTGTAGATAAGGCACTATACGTTCATCGAACGGTATAGTATGCTGGGAAACTGCCTCTCTTCTCCGACAACATAGTACCACAGTGGATGCATTATCCCATATTGTCTGTGATCGGTGAGTGTTTTGAAGATATAGCTGAACAGGGTTAGATGGACCAGGATCCATATTCAACACTGTTAAATTAAACAAAATTCATTACAATGTTAAATAAACGAAATACATTACAATGTTAAATAAACCAAATTCATTGCAATGTTACAATGTTAAATAACAAATGAAATACATTACAATGTTAAATAACAAATGAAATACATTACAATGTTAAATAACAAATGAAATACATTACAATGTTAAATAAACGTAATACATTACAATGTTTAATAAACAAAATTCATTACAATGTTAAATAAACGAAATACATTGCTTGCTAAACTATGAATGACTCGAAGATGAAGCTCCTAAATTACGGAGTGGACAGGTACGCTTGTTATGCCCTGATCCCTTGCATATCCCACATCGAACTTTCGTGCCTGCCTCGCGCCAATCCATCTCATTATGAATTCGCGAAGTTTTGGGTCTACCATGCTCCCTTAATAAGTTTGCATTAGGATGCACTTCCGTAAATGATAACTCTGGCCAATAGTCAGGGTGCTGTATTGGATGGAAGCGACATTCATAGCATAACTTTAAATGAGACAATTTATAGTATTCATCAATCAGATGCACGTATGACAAACGCATGTAATTACAAATTGCAATTACATGAGAGCATGGAATCTTGAACGACTGCCACTTGTTACAAGAACAAGTCCCCTCTTTCAGGCACACTACTTGTATGTTTTGGCCTTTGTAGGGAGAAACCATACTGATGCCAGTTCGAACTTCAAAACTTTGTGTTTCCCTGTCAACTGACGTCACTGTATGTGCAGTTGCTCGTTTCTCCCACCTTTTAAGCTTTCTCATGGCATATTCTGTGTACATGTCCCCACGATCAAGTGCTTCACTTATTTCTTGTCTACGACGTTCAAAGTATAAGATTGTCCGATAAAATGTTAACCTAACAATCGATGTGATCGGTAACATTCTAGCTCCTTTAAATACCCCATTCAAACATTCAGCTGCATTGGTTGTCATCCACCCAAAGCGATACCCATTATCGTGTGATTGCGTCCATTTATTCAAATCTATATCAGAAAAATATTCAAGACACTCAGGGTTCAATTTCTTTAACTCTTTCATGTTTCGAATGAACTTACGTCTTTGGTGTTGATTTCCAGCCCTAAACACCAAATCTTTAAGTTGCTTTGATTTGTATTTGGAATTGAAATTACTCGCAACATGACGTAAACAATAACGATGACATGCTTTAGGTTCAGCCCAACCAATTTCCTCGTTGTTAATTGCTGCAATGATCCCTCTGTGTCTATCCGAAATTAAGCAAATCCCTTCTCGGTCAGTAACATACTCGCGCAATGCCCACAAAAACCATGACCAACTAGATGTATTTTCCCCTTCAACAATAGCAAATGCAAGAGGAAATATATGCCCATTCGAGTCAATAGACAAAGCAGTGAGCAATTTCCCTTTATACTTGCCGTAAAGATGGGTTCCATCTATTTGAATTAAAGGCCTACAGTACTTAAACCCTTCAATTGCAGGACCGAATGCCCAAAAAACACGACCAAATATAGTTTTACCAGGCACATCAGAAGGGAGAAAATGCCAATCTACTCGTGTACCAGGATTGTAGTGCACAGCAGCACTCAACCAGTACGGAAGTTCTGAATACGATTTCTCCCAATCACCGAAGACTGCAACCAAAGCTTTTTTCTTAGCTTCCCACACACGTCTGTATTTGACGTTATATCCGTACTGTTTTTTAAGTGCTTCTTGTAGTACCGCCACAGGCACACTAGGATCAGCTCTAACTAAATTTTGAATTTCAATACTCATGAAATTAGAATCAAGTTGTGCATTATCTTGTGCCAATTCTGTGTATAAACAACTATGGTTCTCTCCAAGTTTAGTAATTTCAAACATCCCATGGATTTTGCGCCGACATGCACGCAACCTCCACCTACAACCTTCATCCCATTGCTTGCATCGCACATACCAAATATCTTGGTTCGATTCTACCACAGATATTTGGTAGTGTTCAGTCACACAATATTTTTTTACTGCCATTTGTAGGTCTTCTTTCGTATCAAATAACATTCCTTTTTGTATTATACTAGAGTTATCTGTACATTTTTCCCTTTCCTCCAAGGTTGATCCTTGTTCACAAACTGAATCAGTAATTTCCCATTCTATCTGTGTAAATATCTCCGACTGAACCAACTCATTTTCATTTTCTATATTTCCTTCTTCTCCAAACAATTCATCAATTTCTACATCAATGTCACTATCCGCACAATTTCCAGCTTCAATAATAACTAAATCTTCTGGACGAAACGACATATTTAAATTCGTTTACAACTGTAAAGGTTAAAAAGAAAAATTAGTCCAAATCTACCCAAAATTATAAACTCGTGGACCCGGTCCACGAGTTTACTACCCAATATAACTAATTTTCCACCATATTATTTACCAATAATTATTCTTATAACAATAAACGCCGAATAATAATCAATACTAAAACCTTAATTTTTTAAATTTATTCATGCATGCAAAAGGGGTATTTTAAAGAATAATGTTATTCTAAAAAAAAAATTCGAAAAATAGGGTATACATATTTAAATTTGTTCATTCATGCAAAACAAAACGTATACATATACAAATTTATTCATTCATGCAAAACAAAACGTATATAACTATTGCATATTTATAAGATAATTAGAAAGGAAAATGTATATGCATACGTATATGGCGGCGGCGGCGGTAGCAACGGTGGTACTGGCGGCGGCGGCAGTGGAGGCGGCGGCGGCGGCGGCGGCGGAACGAAAAGAAGAAGAAAATTGACAGCGACAATGACAAACGAGAACTGAAATAAGAGAAAGGAGAGAAAGGAGGAAAGAAATGAAGAGTGAAAGGAGAGATATGAGGAGAGAAATGAAGAATGAAAAGAGAGAAATGAAGATGGTGGAGGTGGAAATGAGAGGAAGGAGGTGGAAATGGGAGGCTGCCGGTCGGATTTTAAAGTGAGGAACTCGTGGACCCGGTCCACGATTACCGAAATCGTGGACCCCGTCCACGAGTTCGGTCAATGCATGCCTCTGCATGCAGAGGCATGCAGACTGCCGGTGTCAGCGATACCCTGGAAATCGTGGACCCGGTCCACGATTTTGTGAAATCGTGGACCGGGTCCACGATTTCACAACCCTATTCTTCAAAATTCTTTCTCCCCCACCCTATTTTTCCAAATTCTTTCTCCCCCACCCTATTTTTCGAATTCTTTTTTAAAAAACCATTATTTTAAAAAAAAATTCTAGGATTTGAGCATTTTATTTATTATTTAGGAAAAAAAATCAATACTTGCCCTTAAACTTTTCATGTTGTATTGATTTATAATAACTTTTAATTTCATTGAATTATACTCTCAATTTAGATAAATTCTCGATTTTAAACATGAAGAGTATTGTAAGTTTTACTCTAATAAGTTTTCGTTTGAAAATTTATTATGAAAAAATATTTTTACATGCTTTTAATGAATTATGAATCATATATACGTTACAAAATTGATTAAATTTTTTTTTTAAAGAATATTGGTACTAAAATTTTGTTAACATTTTTTAGTTGCATTAATTCAATGGTTAATTTGTACATCATTTAAATTTTATTGCCAATGTTTATATGCTTAAATTAGCATACATGAGTTTAATTGAAATTTTAAAAAAAATGATGAAATTAATGGTTTCTTTTTTAATACAACAGCTATGGAGGTAGAGATTAAACTTTTAACCAAAAAAAAAATGTTATGTTAATTATCATTGAATTAAACTCATTTTGACAATTGGTAAAAAATTAATGTTATTCGGCTATTTATTTTTATTTATTTACTTTTTATATCATTTTCCCATTATTATTTACAGGGTTTTGTACTGATTTTGTAGTATTTTTCAACATTTTCCCCAAAAAAAAAAAAAAAAAAATAGTAACATAGTGTTTGGCAAATTTGGGAAGGACAAGAGGATATTGCGAGGGTCTCTATATAATTTCATGTTAATTTAATTTTGAAATAGTATGGTTTCATTGTTAGTTTAGTTTGAAATGAATACTAAAAGTTGTTAATGAGAAGTATGAAATTTTGAAGTTACATTAGAAGTTTAGTATTCAAATTCTTAAAATTATATTTAATCCGTCTAAATTTTCATTTGATATCTAAGAAGTCTATTTGCTACAAACTATGTGAAAAGAAGAAAAGTATAAATATACACACAACAGCAAAAATTAAAAAATTTATTAAATATTTCTTAAAAATTCATATATGATAACATCAAAACTTAAAAATTAAATTGAGAATTTAAATCAAAGAGGTGAGCTAAGCTCATTTTTTTAGTACAACAATTGGGGGTTGAGAATACGAACATTCCATCTCTGAGATGAAAGGTTATGTCAATTACTCTTCGAGCTAAGCTAAGCTAATTTGAGATTGAGTCTTTCTTATAATGAGTTAAAAATCACATCTAACACGTTATAGACAATAATTTTTTCATGAAGACTTTAGTAATGGAAGAAAAAAAAAAAGAAAGTAAGAAAAATAGAAGGTTTGGTGAGGTGTTGACTGTTGACCAAGGAATTAAGGCGGTCTCATATTCCATGGGTGACAGGCAGTAATCGTAGCAAACAAAATAAGATTCTATTTTTCTTAGTCAACTTTTTAGGGAAACAAACAGACAAAATCAAAAAGAGATTCATACATGTATGTCCATATCATTATCATGTCTCAATCTCCCATGAAATTATAAAATTTTATTATTTAAAAAGAAAGAGTTTTCGCTAAATAAATTGTAGTTCGATAAGAAAATAAATGCATCTGAGTATTTTTTTTAAAACATTTTAAAGATGTATAATTTTCTTGGAAATTCTAACAATTTTATATCATACTATTGCTCTATAATATAATTTGTTGAATCTACATTAAAAAAAATATTTTTTTTTTAATGTTTTCAAGAAATAAAAATTACCCCTTTTCAAATTTAAGAGAAAACTTGTGACATGTATATACATTTAAGGAAGGTATTGATGCACATGATTTTGATCTCATAGTGAGTGTCAAGGCAAGATCTTCGGTTGTGTTATAAGTCCATGTGCTTTGTTGTCTAAGTAAATATTAGATTGAAGTGATGTACATTGAAAAAGCTATAAAATGATTGGTCACTCAAATACAGATGTTAAACAAAGCATAGACAAGTAGGTAGGGGTGTTCAAGGTTTGATTCGGTTTGGTTTGGGGCTCAAACTGAACCAAACTGCAAAATTTGAAAACTTGCATATACGAAACCGAACCAAACTGCATGTTCGGTTCGATTTCGTGGTTTCACTTTTTTTTTTTTTCTCCTTTTTGCTTTTTTTCCCCTCTATTTCATATTTCATATACTTCAAAATTTTCTACATATAACTAATTATATATCAAATGAGGATTATTTACAAGAAGCTATTCATCCAATATTTCTAATCTTCTCAAAGACTTTAAGGAACCAAAAAAGCTTTGTCACAAGAATCAAATCCAAGCAACTAAACATAAATTATTTCAAGGCTATTTCTAAACATAATCAAATCCAAACAATTTTACCTCCATTTTTGTTTTAAACTACTACTAGTACTACTAGTTCAACAACAACAAAAACATAAATTAAAAGTCCAAATATAAAAGTACTACAAACATAAAAGTTATTGTTCTACAAACAATAACATAAAAGTTTCAAAATCCAAACGACTACTTTGAAATTTTAAGTTATACAAAATTAAAAGCAAACTTCTTCAAGCCACCTTCTCCTTGGTTTTTTTGCCTCTAAACCTGATTTAAAGTCTAGAAAAAATGATAAACTTGTTAACATAATAATTATATAAATAATATATTTGAATTTTGGAGACTAAAAAAATGTTTGAAAGATACTAATAACCTGCTTCAACAATTACAATATCCTCCAAGTAGCTTTGAAGATCAATGTTAATTGCTTTTGAACGTAACTCAATTTTGTGCGCACACAAGCGCCTCAACTATGGTTGGAGTTAACGTAGAATGAAAATGATCAATTACTCTCCCACTAGTACTGAATGCAGACTCAGAAGCAATTTTGAATACTAAAATTGCTAAAAGATCTCGTGCAATCTTGCTAAAAACATTATATCTAGAAGAATTTCCTTTCCACCAATCTAAAATATCAAAATTCTACTCATGTTTAATACGAGGCTCCAATAAAGTAAATATCAACTTCTGTATCCACACTATGGGCATTCTCTTCCTCCATGTCTTCAAAATCCAAACGAACAACCTCTGCAGCAATACTAATAGTAGTAGTAGTAATAGACGTATTTGTAGAGCTACTATTAGTACAACTTAAAGATTGATTCATACTTGTATAATTCTTGGACTTGTGAGCTGATGAACTTGAACCATCATTAATAACTAACAAATCATATTCATTGAACAATTTTCTTAAAACATCCTCCACTTTATTTCCTATTTCTTTTGCCGCATCCATATCAAATAATTGATTAAGACAATATATAAGAGATTTCATCGTGTAACGAGGGTCCAAAACAAAAGCAACATACAAAAATAAATTTGTTTTCTCACTTTTCCCCCCAATACTTATCATATTTCTCTTGCATTTTCATTGTCATTTCACGCAACAACAAATTTTCAGGACTAGTTACACTTGAATATTTTCTTATTCAATTTTGAATAATACTAATCTCATGGAAGACCATATTGGAAGTAACATAAAGAGACCCTGAAAGCCTAACAGTTACTTCATAAAATACATACAAGAATTTGGTAAATATTCTAGCAATTTTCCAATCTTAGGTGGTTAGTTTACTCTCCTCATTCATGTAGATTTTGTCATAGTCTTCTAACCTCTCAAATGCCTTTTCAAACTTTTCCGCTCCATCAAGCATCAAGTATGTAGAATTTCATCTAGTTTGAACATCAAGACACAACATACTCTTACTAAATATGTTCTTCTCTTCGATGCACTTCTTAAATTTAGCAAGTCTAGCATGAGAAGAAACCTCACGACATTTCGAATTCGAATCAATGAATCTTTCACATCTTTTAGGCCATCATAGACAATTAAATTCAATATATGTGCACAACATCTAACATGCAAGAAATCACCATTCAACACCAACCCATGTTTAACACGCTTCTTTAGGTAAGCAATGGTTGTATCATTTGATGAACCATTATCAACAGTTAATGTCAAAACCCTTTCAGTACCCCATTGTTTCAAACATTTCTCAACCTTTTTTCCTATTGTCTCCCCTCTATGGTTTTTAATCTAAGAGAAATTAATAATTCACTTATGTAGCTTCCAATCTCTATCAATAAAGTGTGCAGTCAAAACCATGTAATTAATATTTTGAATCGATATCCAAGTATTGGTTGTAAGCAACACTCTATATCCTTCCTCCACAAAAGTATCTTCAACTGTTCTTTCAAATTACCATATATTCCCAAAATATTCCTGGCAATTGTAGTTCGAGAAGGAATAATAAAATTTGGTTCTACTAACATCAAAGTCCCCTCCACGAACCTCTTAAATCCCTCATTCTCCACAAATTCAAATGACAACTCATCAATTATGATCATCTTGGCAATTAGTCTTCGAGCATTCTCGATAGTAAACACCTTATACTTAATCGATGTTGTATTACCACCCCCACCACTCTCTTTATTCTTAAATACTAACTTAGTTTGAGTTATATCAAACTTAAAGTCTTTCATCTGATAAGGATTTTGTTTTACAATAATGTTCAAGATGAATTCTCATAGATGAATTTCTATTCCTTCTTGGATGACTTGCATATACCATACCACAATAATTACATTTAGCATGCGAATCAACATCACTATATTAAGAGCATTTAGTAAAGTGATCTCATACCATAGACATATTTTTCCTCTTTTCTCAAACTTGTGCTAGAGTGCTGGTGGAGACATCTTAACAATTGTGCTCTTGCTCTTACTATTACTATTGTCATTGCTCAAGCTCATGCTCATGTACATGGTGCTACAATACATGACAAGCGGTAATATAATACCTAACAAGCAACAATACCAACCTCTTAAAATCGTGGAATTGAAGCGAGATCTGATTTTGAATGACGACGGGAGTTGGGAGCAGAAGTTGAACGACGACTTAGATCTCGAAGTTAAATGGCATGATTCCTCGGATCTAGATTTGGAAGCCGAAGTGTCGAATGGTGTGGTTCATCGGATCTGGATCTGACAGTTAAATGCTTGTTCGAATCTAGAAGTCGAAGTATCGAACGATGGTTGATGGCAGAACGACATGGAAATGATGGGCTCACCGGCTCAGATCTGGAAGTCGAACATGAACAACGTGTCGACGAGGTTGCTGTGGTGTGGCTCGTTGTTGTCAAAAGTCGAGTGGTGTTGGCGACTGGCATTGGGAGCCCAGCGGGCCACGGCTATAAAGTTGAAGTGAAGAGGAGAAAGTGGATGTGGATGGAATAA

mRNA sequence

ATGGTCGGCCATGGCAATCACAGGCTGAAACTCTCCATCTTCCACCACCGATCTTCCTCAGACTCCAAACCCGAACGCCCAAAAGAGTATCCCGAAGAGTACCTCTGCCCAATTTCTAAGTCTTTAATGGCGGACCCAGTTGTCGTCTCCTCTGGTCACACCTTCGAGCGTCTCTCTGTTCAAGTTTGTCAAGATTTGGGGTTTTCGCCCAAGCTTGAAGAAGATGGTTCAAGGCCGGATTTCTCCTCTGTTATTACCAACAGAAACATGAGATTCACTATTCTCAAATGGTGCGATAATAACGGAATCGAACATCCACAACCCCCTGATTACAGCTCCATTGAACTCATTGTTCGTCGATTAATGGAGAAGCAGAGGCAGGAGAATCGATTCGAAGCTTCTGATAGCGAGTTGATTAGGGGCGTCGCCGATAAACCGCAGGGAGTTGCTGTTCATGCGACCACCGAGGTTGGGCTACGACTCAACCGATTTCAACTCGACTCGCCGCCGCAGAAGGAGGAGATCGTACGAGAAAGTACTATTTTGCCCTTCAAAACGCAACCCTCTAGTTATGCTGCTCATTCTTCTTCCTCTTCCCATGGAAGCTTCGATAGAGATCCTAATCACAGAGGATATTCTGATTCGTATTCCCCAAATTCAGAAGAAGAATCTATACTCATTTTGAAATTCAGAAGCAACGATGAATTCGAGCAACGAGAAGGAGTGATATCCCTAAGAAAATTAACTAAATCCAACGAATCGATTAGGGTTTCTTTATGCACAAAGGAATTCCTCGCCGCCCTACTTCCTTTGGTTTTGTCCCGATCTACAAATATCCAGATCAACGCAGTAGCTTCCGTCGTGAATCTCTCTCTCGAGAAACCCAACAAATTGAAGATCGTACGGGCAGGATTTGTTCCGCCATTAATCGACGTTTTAGACGGCAGAAGCGCCGAAGCTCAAGAACACGCCGCCGGTGCTCTGTTCAGTTTATCGTTAGACGACGAGAACAAAATGGCGATTGGAATTCTCGGCGCGTTACCGGTGCTGATGAATACGCTCCGAGCCGACAGCGAGAGAACGAGGAACGATTCAGCTCTTTGTTTGTACCATTTGACACTAAACCCTAGCAACCGAGTTAAACTGGTGAAACTCGGCGCCGTACCGATTCTGCTGTCGTTGACGAGAATCGAAGGTTGTGCGAGCCGAATACTTCTGATTCTGTGCAATATCGCGGCCTCTGTGGACGGGAGATCGGCGATGCTGGATGCGAATGCGGTGGGTTGTTTGGTGGAGATATTGAAGGAGAAGGACATTGATTCCGAGTCGACTCGGGAGAATTGTGTGGTGGCGCTTTACGCACTGAGTCAAGGAGGATTCCGATTCAAAGGATTGGCGAAGGAGGCCGGCGCGGTGGAGGTTCTGAGAGAGGTTGAAGAGAGGGGAAGCGAGCGGGCAAGGGAAAAAGCCAAGAGGATTTTGCAGATGATGAGAACCGGCGGAAGCGGTTCGGTCGAGATTGAAGGCGTCGGCCGAAATGGGCTCGACGCTGGTGGAGTCAGCTGGACCGGTCGGGTTGGTGCTGGCTTGAACCGATTTGGAAGCCGAAGTGTCGAATGGTGTGGTTCATCGGATCTGGATCTGACAGTTAAATGCTTGTTCGAATCTAGAAGTCGAAGTATCGAACGATGGTTGATGGCAGAACGACATGGAAATGATGGGCTCACCGGCTCAGATCTGGAAGTCGAACATGAACAACGTGTCGACGAGGTTGCTGTGGTGTGGCTCGTTGTTGTCAAAAGTCGAGTGGTGTTGGCGACTGGCATTGGGAGCCCAGCGGGCCACGGCTATAAAGTTGAAGTGAAGAGGAGAAAGTGGATGTGGATGGAATAA

Coding sequence (CDS)

ATGGTCGGCCATGGCAATCACAGGCTGAAACTCTCCATCTTCCACCACCGATCTTCCTCAGACTCCAAACCCGAACGCCCAAAAGAGTATCCCGAAGAGTACCTCTGCCCAATTTCTAAGTCTTTAATGGCGGACCCAGTTGTCGTCTCCTCTGGTCACACCTTCGAGCGTCTCTCTGTTCAAGTTTGTCAAGATTTGGGGTTTTCGCCCAAGCTTGAAGAAGATGGTTCAAGGCCGGATTTCTCCTCTGTTATTACCAACAGAAACATGAGATTCACTATTCTCAAATGGTGCGATAATAACGGAATCGAACATCCACAACCCCCTGATTACAGCTCCATTGAACTCATTGTTCGTCGATTAATGGAGAAGCAGAGGCAGGAGAATCGATTCGAAGCTTCTGATAGCGAGTTGATTAGGGGCGTCGCCGATAAACCGCAGGGAGTTGCTGTTCATGCGACCACCGAGGTTGGGCTACGACTCAACCGATTTCAACTCGACTCGCCGCCGCAGAAGGAGGAGATCGTACGAGAAAGTACTATTTTGCCCTTCAAAACGCAACCCTCTAGTTATGCTGCTCATTCTTCTTCCTCTTCCCATGGAAGCTTCGATAGAGATCCTAATCACAGAGGATATTCTGATTCGTATTCCCCAAATTCAGAAGAAGAATCTATACTCATTTTGAAATTCAGAAGCAACGATGAATTCGAGCAACGAGAAGGAGTGATATCCCTAAGAAAATTAACTAAATCCAACGAATCGATTAGGGTTTCTTTATGCACAAAGGAATTCCTCGCCGCCCTACTTCCTTTGGTTTTGTCCCGATCTACAAATATCCAGATCAACGCAGTAGCTTCCGTCGTGAATCTCTCTCTCGAGAAACCCAACAAATTGAAGATCGTACGGGCAGGATTTGTTCCGCCATTAATCGACGTTTTAGACGGCAGAAGCGCCGAAGCTCAAGAACACGCCGCCGGTGCTCTGTTCAGTTTATCGTTAGACGACGAGAACAAAATGGCGATTGGAATTCTCGGCGCGTTACCGGTGCTGATGAATACGCTCCGAGCCGACAGCGAGAGAACGAGGAACGATTCAGCTCTTTGTTTGTACCATTTGACACTAAACCCTAGCAACCGAGTTAAACTGGTGAAACTCGGCGCCGTACCGATTCTGCTGTCGTTGACGAGAATCGAAGGTTGTGCGAGCCGAATACTTCTGATTCTGTGCAATATCGCGGCCTCTGTGGACGGGAGATCGGCGATGCTGGATGCGAATGCGGTGGGTTGTTTGGTGGAGATATTGAAGGAGAAGGACATTGATTCCGAGTCGACTCGGGAGAATTGTGTGGTGGCGCTTTACGCACTGAGTCAAGGAGGATTCCGATTCAAAGGATTGGCGAAGGAGGCCGGCGCGGTGGAGGTTCTGAGAGAGGTTGAAGAGAGGGGAAGCGAGCGGGCAAGGGAAAAAGCCAAGAGGATTTTGCAGATGATGAGAACCGGCGGAAGCGGTTCGGTCGAGATTGAAGGCGTCGGCCGAAATGGGCTCGACGCTGGTGGAGTCAGCTGGACCGGTCGGGTTGGTGCTGGCTTGAACCGATTTGGAAGCCGAAGTGTCGAATGGTGTGGTTCATCGGATCTGGATCTGACAGTTAAATGCTTGTTCGAATCTAGAAGTCGAAGTATCGAACGATGGTTGATGGCAGAACGACATGGAAATGATGGGCTCACCGGCTCAGATCTGGAAGTCGAACATGAACAACGTGTCGACGAGGTTGCTGTGGTGTGGCTCGTTGTTGTCAAAAGTCGAGTGGTGTTGGCGACTGGCATTGGGAGCCCAGCGGGCCACGGCTATAAAGTTGAAGTGAAGAGGAGAAAGTGGATGTGGATGGAATAA

Protein sequence

MVGHGNHRLKLSIFHHRSSSDSKPERPKEYPEEYLCPISKSLMADPVVVSSGHTFERLSVQVCQDLGFSPKLEEDGSRPDFSSVITNRNMRFTILKWCDNNGIEHPQPPDYSSIELIVRRLMEKQRQENRFEASDSELIRGVADKPQGVAVHATTEVGLRLNRFQLDSPPQKEEIVRESTILPFKTQPSSYAAHSSSSSHGSFDRDPNHRGYSDSYSPNSEEESILILKFRSNDEFEQREGVISLRKLTKSNESIRVSLCTKEFLAALLPLVLSRSTNIQINAVASVVNLSLEKPNKLKIVRAGFVPPLIDVLDGRSAEAQEHAAGALFSLSLDDENKMAIGILGALPVLMNTLRADSERTRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGCASRILLILCNIAASVDGRSAMLDANAVGCLVEILKEKDIDSESTRENCVVALYALSQGGFRFKGLAKEAGAVEVLREVEERGSERAREKAKRILQMMRTGGSGSVEIEGVGRNGLDAGGVSWTGRVGAGLNRFGSRSVEWCGSSDLDLTVKCLFESRSRSIERWLMAERHGNDGLTGSDLEVEHEQRVDEVAVVWLVVVKSRVVLATGIGSPAGHGYKVEVKRRKWMWME

Homology

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BLAST of Clc01G13840 vs. NCBI nr
Match: XP_038895164.1 (U-box domain-containing protein 38-like [Benincasa hispida])

HSP 1 Score: 948.0 bits (2449), Expect = 4.2e-272
Identity = 494/542 (91.14%), Postives = 519/542 (95.76%), Query Frame = 0


Query: 1   MVGHGNHRLKLSIFHHRSSSDSKPERPKEYPEEYLCPISKSLMADPVVVSSGHTFERLSV 60
           MVGHGNHRLKLSIFHHRSSSDSKPERPKEYPEEYLC ISKSLMADPVVVSSG TFERLSV
Sbjct: 1   MVGHGNHRLKLSIFHHRSSSDSKPERPKEYPEEYLCAISKSLMADPVVVSSGQTFERLSV 60

Query: 61  QVCQDLGFSPKLEEDGSRPDFSSVITNRNMRFTILKWCDNNGIEHPQPPDYSSIELIVRR 120
           QVCQDLGFSP+LEEDGSRPDFSSVITNRNMR TILKWCDNNGIEHPQPPDYSSIELIVR+
Sbjct: 61  QVCQDLGFSPELEEDGSRPDFSSVITNRNMRSTILKWCDNNGIEHPQPPDYSSIELIVRQ 120

Query: 121 LMEKQRQENRFEASDSELIRGVADKPQGVAVHATTEVGLRLNRFQLDSPPQKEEIVREST 180
           LMEK+R++NRFEASDSELIRGVADKPQGVAVHATTEVG RLNRFQL+SPPQ EEIVREST
Sbjct: 121 LMEKERRKNRFEASDSELIRGVADKPQGVAVHATTEVGRRLNRFQLNSPPQTEEIVREST 180

Query: 181 ILPFKTQPSSYAAHSSSSSHGSFD--RDPNHRGYSDSYSPNSEEESILILKFRSNDEFEQ 240
           +LPFKTQPSSYAAHSSSSSHGSFD  RDPNHRGYSDSYSPNSEEES LILKF+S+DE+EQ
Sbjct: 181 LLPFKTQPSSYAAHSSSSSHGSFDRERDPNHRGYSDSYSPNSEEESRLILKFKSSDEYEQ 240

Query: 241 REGVISLRKLTKSNESIRVSLCTKEFLAALLPLVLSRSTNIQINAVASVVNLSLEKPNKL 300
           REGVISLRKLTKSNESIR SLCTKEFLAALLPLVLSRS NIQINAVASVVNLSLEKPNKL
Sbjct: 241 REGVISLRKLTKSNESIRGSLCTKEFLAALLPLVLSRSANIQINAVASVVNLSLEKPNKL 300

Query: 301 KIVRAGFVPPLIDVLDGRSAEAQEHAAGALFSLSLDDENKMAIGILGALPVLMNTLRADS 360
           KIVRAGFVPPLIDVLDG + E+QEHAAGALFSLS DDENKMAIGILGALPVLMNTLR+DS
Sbjct: 301 KIVRAGFVPPLIDVLDGGNTESQEHAAGALFSLSSDDENKMAIGILGALPVLMNTLRSDS 360

Query: 361 ERTRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGCASRILLILCNIAASVDGR 420
           ERTRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEG  SRILLILCNIA SVDGR
Sbjct: 361 ERTRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGFTSRILLILCNIAVSVDGR 420

Query: 421 SAMLDANAVGCLVEILKEKDIDSESTRENCVVALYALSQGGFRFKGLAKEAGAVEVLREV 480
           SAMLDANAVGCLVEILK+KD+DSESTRENCVVALYALSQGGFRF+GLAKEAGAVEVLREV
Sbjct: 421 SAMLDANAVGCLVEILKDKDMDSESTRENCVVALYALSQGGFRFRGLAKEAGAVEVLREV 480

Query: 481 EERGSERAREKAKRILQMMRTGGSGSVEIEGVGRNGLDAGGVSWTGRVGAGLNRFGSRSV 540
           E RGSERAREKA+RILQMMRTGGSGSVEI+GV R+GL+ GGVSWTG VGAGLNR+ + + 
Sbjct: 481 EGRGSERAREKARRILQMMRTGGSGSVEIDGVVRHGLNTGGVSWTGGVGAGLNRYSTNTT 540

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BLAST of Clc01G13840 vs. NCBI nr
Match: XP_004152547.1 (U-box domain-containing protein 38 [Cucumis sativus] >KGN64288.1 hypothetical protein Csa_013227 [Cucumis sativus])

HSP 1 Score: 919.8 bits (2376), Expect = 1.2e-263
Identity = 472/540 (87.41%), Postives = 506/540 (93.70%), Query Frame = 0


Query: 1   MVGHGNHRLKLSIFHHRSSSDSKPERPKEYPEEYLCPISKSLMADPVVVSSGHTFERLSV 60
           MVGHGNHRLKLSIFHHRSSSD KP+RPK+ P+EYLCPISKSLMADPVVVSSG TFERLSV
Sbjct: 1   MVGHGNHRLKLSIFHHRSSSDPKPQRPKDCPQEYLCPISKSLMADPVVVSSGQTFERLSV 60

Query: 61  QVCQDLGFSPKLEEDGSRPDFSSVITNRNMRFTILKWCDNNGIEHPQPPDYSSIELIVRR 120
           +VCQDLGFSP+LEED SR DFSSVITNRN+R TILKWCDNNGIEHPQPP Y+SIEL+VR+
Sbjct: 61  EVCQDLGFSPRLEEDDSRSDFSSVITNRNIRSTILKWCDNNGIEHPQPPSYTSIELVVRQ 120

Query: 121 LMEKQRQENRFEASDSELIRGVADKPQGVAVHATTEVGLRLNRFQLDSPPQKEEIVREST 180
           LM+K+ QENRFE SDS LIRGVADKP GVAVHATTEVGLRLNRFQL+SP Q EE++REST
Sbjct: 121 LMQKEEQENRFEVSDSALIRGVADKPTGVAVHATTEVGLRLNRFQLNSPEQTEEVIREST 180

Query: 181 ILPFKTQPSSYAAHSSSSSHGSFDRDPNHRGYSDSYSPNSEEESILILKFRSNDEFEQRE 240
           +LPFKTQPSSYA +S SSSHG  DRD NHRGYSDSY+PN EEES LILKFRSNDEFEQRE
Sbjct: 181 LLPFKTQPSSYATNSPSSSHGGIDRDSNHRGYSDSYAPNLEEESRLILKFRSNDEFEQRE 240

Query: 241 GVISLRKLTKSNESIRVSLCTKEFLAALLPLVLSRSTNIQINAVASVVNLSLEKPNKLKI 300
           GVISLRKLTKSNESIR SLCTKEFLAALLPL+LSRSTN+QINAVASVVNLSLEK NKLKI
Sbjct: 241 GVISLRKLTKSNESIRASLCTKEFLAALLPLILSRSTNVQINAVASVVNLSLEKANKLKI 300

Query: 301 VRAGFVPPLIDVLDGRSAEAQEHAAGALFSLSLDDENKMAIGILGALPVLMNTLRADSER 360
           VRAGFVPPLIDVLDG + E+QEHAAGALFSLSLDDENKMAIGILGALPVLMNTLR+DSER
Sbjct: 301 VRAGFVPPLIDVLDGGNTESQEHAAGALFSLSLDDENKMAIGILGALPVLMNTLRSDSER 360

Query: 361 TRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGCASRILLILCNIAASVDGRSA 420
           TRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGC SRI+LILCNIA SVDGRSA
Sbjct: 361 TRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGCTSRIVLILCNIAVSVDGRSA 420

Query: 421 MLDANAVGCLVEILKEKDIDSESTRENCVVALYALSQGGFRFKGLAKEAGAVEVLREVEE 480
           MLDANAV CLV +LKEK++DSESTRENCVVALYALSQGGFRF+GLAKEAGAVEVLREVEE
Sbjct: 421 MLDANAVSCLVGLLKEKEMDSESTRENCVVALYALSQGGFRFRGLAKEAGAVEVLREVEE 480

Query: 481 RGSERAREKAKRILQMMRTGGSGSVEIEGVGRNGLDAGGVSWTGRVGAGLNRFGSRSVEW 540
           RGSERAREKAKRILQMMRTGGSGSVEIEGV ++GLD GGVSWTGRVG GLNR+ + + ++
Sbjct: 481 RGSERAREKAKRILQMMRTGGSGSVEIEGVVQHGLDMGGVSWTGRVGTGLNRYSTNTTKF 540

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BLAST of Clc01G13840 vs. NCBI nr
Match: KAA0055206.1 (U-box domain-containing protein 38-like [Cucumis melo var. makuwa])

HSP 1 Score: 906.4 bits (2341), Expect = 1.4e-259
Identity = 473/540 (87.59%), Postives = 502/540 (92.96%), Query Frame = 0


Query: 1   MVGHGNHRLKLSIFHHRSSSDSKPERPKEYPEEYLCPISKSLMADPVVVSSGHTFERLSV 60
           MVGHGNHRLKLSIFH RSSSDSKP+RPK+ P+EYLCPISKSLMADPVVVSSG TFERLSV
Sbjct: 1   MVGHGNHRLKLSIFHQRSSSDSKPQRPKDCPQEYLCPISKSLMADPVVVSSGQTFERLSV 60

Query: 61  QVCQDLGFSPKLEEDGSRPDFSSVITNRNMRFTILKWCDNNGIEHPQPPDYSSIELIVRR 120
           +VCQDLGFSP LEED SRPDFSSVITNRN+R TILKWCDNNGIEHPQPP Y+SIELIVR+
Sbjct: 61  KVCQDLGFSPMLEEDDSRPDFSSVITNRNIRSTILKWCDNNGIEHPQPPPYTSIELIVRQ 120

Query: 121 LMEKQRQENRFEASDSELIRGVADKPQGVAVHATTEVGLRLNRFQLDSPPQKEEIVREST 180
           LM+K+ QENRFEASDS LIR VADKP GVAVHATTEVGLR NRFQL+SP Q EE  REST
Sbjct: 121 LMQKEEQENRFEASDSALIRRVADKPTGVAVHATTEVGLRHNRFQLNSPEQTEETTREST 180

Query: 181 ILPFKTQPSSYAAHSSSSSHGSFDRDPNHRGYSDSYSPNSEEESILILKFRSNDEFEQRE 240
           +LPFKTQPSSYAA++SSSSHG FDRD NH GYSDS SPN EEES LILKFRSNDEFEQRE
Sbjct: 181 LLPFKTQPSSYAANASSSSHGGFDRDSNHGGYSDSDSPNLEEESRLILKFRSNDEFEQRE 240

Query: 241 GVISLRKLTKSNESIRVSLCTKEFLAALLPLVLSRSTNIQINAVASVVNLSLEKPNKLKI 300
           GVISLRKLTKSNESIR SLCTKEFLAALLPLVLSRS N+QINAVASVVNLSLEK NKLKI
Sbjct: 241 GVISLRKLTKSNESIRASLCTKEFLAALLPLVLSRSPNVQINAVASVVNLSLEKANKLKI 300

Query: 301 VRAGFVPPLIDVLDGRSAEAQEHAAGALFSLSLDDENKMAIGILGALPVLMNTLRADSER 360
           VRAGFVP LIDVLDG + E+QEHAAGALFSLSLDDENKMAIGILGALPVLMNTLR+DSER
Sbjct: 301 VRAGFVPLLIDVLDGGNTESQEHAAGALFSLSLDDENKMAIGILGALPVLMNTLRSDSER 360

Query: 361 TRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGCASRILLILCNIAASVDGRSA 420
           TRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGC SRI+LILCNIA SVDGRSA
Sbjct: 361 TRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGCTSRIVLILCNIAVSVDGRSA 420

Query: 421 MLDANAVGCLVEILKEKDIDSESTRENCVVALYALSQGGFRFKGLAKEAGAVEVLREVEE 480
           MLDANAVGCLV +LK+K +DSESTRENCVVALYALSQGGFRF+GLAKEAGAVEVLREVEE
Sbjct: 421 MLDANAVGCLVGLLKDKAMDSESTRENCVVALYALSQGGFRFRGLAKEAGAVEVLREVEE 480

Query: 481 RGSERAREKAKRILQMMRTGGSGSVEIEGVGRNGLDAGGVSWTGRVGAGLNRFGSRSVEW 540
           RG+ERAREKAKRILQMMRTGGSGSVEIEGV R+GLD  GVSWTGRVGAGLNR+ + + ++
Sbjct: 481 RGTERAREKAKRILQMMRTGGSGSVEIEGVVRHGLDTSGVSWTGRVGAGLNRYSTNTTKF 540

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BLAST of Clc01G13840 vs. NCBI nr
Match: XP_008438058.1 (PREDICTED: U-box domain-containing protein 38-like [Cucumis melo] >TYJ99136.1 U-box domain-containing protein 38-like [Cucumis melo var. makuwa])

HSP 1 Score: 905.6 bits (2339), Expect = 2.4e-259
Identity = 473/540 (87.59%), Postives = 501/540 (92.78%), Query Frame = 0


Query: 1   MVGHGNHRLKLSIFHHRSSSDSKPERPKEYPEEYLCPISKSLMADPVVVSSGHTFERLSV 60
           MVGHGNHRLKLSIFH RSSSDSKP+RPK+ P+EYLCPISKSLMADPVVVSSG TFERLSV
Sbjct: 1   MVGHGNHRLKLSIFHQRSSSDSKPQRPKDCPQEYLCPISKSLMADPVVVSSGQTFERLSV 60

Query: 61  QVCQDLGFSPKLEEDGSRPDFSSVITNRNMRFTILKWCDNNGIEHPQPPDYSSIELIVRR 120
           QVCQDLGFSP LEED SRPDFSSVI NRN+R TILKWCDNNGIEHPQPP Y+SIELIVR+
Sbjct: 61  QVCQDLGFSPMLEEDDSRPDFSSVIINRNIRSTILKWCDNNGIEHPQPPPYTSIELIVRQ 120

Query: 121 LMEKQRQENRFEASDSELIRGVADKPQGVAVHATTEVGLRLNRFQLDSPPQKEEIVREST 180
           LM+K+ QENRFEASDS LIR VADKP GVAVHATTEVGLR NRFQL+SP Q EE  REST
Sbjct: 121 LMQKEEQENRFEASDSALIRRVADKPTGVAVHATTEVGLRHNRFQLNSPEQTEETTREST 180

Query: 181 ILPFKTQPSSYAAHSSSSSHGSFDRDPNHRGYSDSYSPNSEEESILILKFRSNDEFEQRE 240
           +LPFKTQPSSYAA++SSSSHG FDRD NH GYSDS SPN EEES LILKFRSNDEFEQRE
Sbjct: 181 LLPFKTQPSSYAANASSSSHGGFDRDSNHGGYSDSDSPNLEEESRLILKFRSNDEFEQRE 240

Query: 241 GVISLRKLTKSNESIRVSLCTKEFLAALLPLVLSRSTNIQINAVASVVNLSLEKPNKLKI 300
           GVISLRKLTKSNESIR SLCTKEFLAALLPLVLSRS N+QINAVASVVNLSLEK NKLKI
Sbjct: 241 GVISLRKLTKSNESIRASLCTKEFLAALLPLVLSRSPNVQINAVASVVNLSLEKANKLKI 300

Query: 301 VRAGFVPPLIDVLDGRSAEAQEHAAGALFSLSLDDENKMAIGILGALPVLMNTLRADSER 360
           VRAGFVP LIDVLDG + E+QEHAAGALFSLSLDDENKMAIGILGALPVLMNTLR+DSER
Sbjct: 301 VRAGFVPLLIDVLDGGNTESQEHAAGALFSLSLDDENKMAIGILGALPVLMNTLRSDSER 360

Query: 361 TRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGCASRILLILCNIAASVDGRSA 420
           TRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGC SRI+LILCNIA SVDGRSA
Sbjct: 361 TRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGCTSRIVLILCNIAVSVDGRSA 420

Query: 421 MLDANAVGCLVEILKEKDIDSESTRENCVVALYALSQGGFRFKGLAKEAGAVEVLREVEE 480
           MLDANAVGCLV +LK+K +DSESTRENCVVALYALSQGGFRF+GLAKEAGAVEVLREVEE
Sbjct: 421 MLDANAVGCLVGLLKDKAMDSESTRENCVVALYALSQGGFRFRGLAKEAGAVEVLREVEE 480

Query: 481 RGSERAREKAKRILQMMRTGGSGSVEIEGVGRNGLDAGGVSWTGRVGAGLNRFGSRSVEW 540
           RG+ERAREKAKRILQMMRTGGSGSVEIEGV R+GLD  GVSWTGRVGAGLNR+ + + ++
Sbjct: 481 RGTERAREKAKRILQMMRTGGSGSVEIEGVVRHGLDTSGVSWTGRVGAGLNRYSTNTTKF 540

[Close]

BLAST of Clc01G13840 vs. NCBI nr
Match: XP_023519818.1 (U-box domain-containing protein 38-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 872.1 bits (2252), Expect = 2.9e-249
Identity = 462/540 (85.56%), Postives = 495/540 (91.67%), Query Frame = 0


Query: 1   MVGHGNHRLKLSIFHHRSSSDSKPERPKEYPEEYLCPISKSLMADPVVVSSGHTFERLSV 60
           MVGHGNHRLKLSIFHHRSSSDSKPERP EYP EYLC ISKSLMADPVVVSSG TFERL V
Sbjct: 1   MVGHGNHRLKLSIFHHRSSSDSKPERPVEYPREYLCEISKSLMADPVVVSSGQTFERLCV 60

Query: 61  QVCQDLGFSPKLEEDGSRPDFSSVITNRNMRFTILKWCDNNGIEHPQPPDYSSIELIVRR 120
           QVCQ+LGFSPKL EDGSR D +SVITNRNMRFTILKWCD+NGIEHP+PP Y+SIEL+VR+
Sbjct: 61  QVCQELGFSPKL-EDGSRLDCTSVITNRNMRFTILKWCDDNGIEHPRPPQYTSIELVVRQ 120

Query: 121 LMEKQRQENRFEASDSELIRGVADKPQGVAVHATTEVGLRLNRFQLDSPPQKEEIVREST 180
           LME++RQENRFE SDSEL+RGVADKP GVAVHATTEVG R+NRFQL+SPP+ EEIVREST
Sbjct: 121 LMERERQENRFETSDSELLRGVADKPPGVAVHATTEVGFRVNRFQLNSPPETEEIVREST 180

Query: 181 ILPFKTQPSSYAAHSSSSSHGSFDRDPNHRGYSDSYSPNSEEESILILKFRSNDEFEQRE 240
           ILPFKTQPS YAAHSSSSS  SFD     RG SDSY+PNSEEES LI+KFRS DEFEQ+E
Sbjct: 181 ILPFKTQPSCYAAHSSSSS--SFD-----RGSSDSYTPNSEEESHLIMKFRSGDEFEQQE 240

Query: 241 GVISLRKLTKSNESIRVSLCTKEFLAALLPLVLSRSTNIQINAVASVVNLSLEKPNKLKI 300
           GVISLRKLTKSNESIR SLCTKEFLAALLPLV SRSTNIQINAVASVVNLSLEK NKLKI
Sbjct: 241 GVISLRKLTKSNESIRASLCTKEFLAALLPLVSSRSTNIQINAVASVVNLSLEKSNKLKI 300

Query: 301 VRAGFVPPLIDVLDGRSAEAQEHAAGALFSLSLDDENKMAIGILGALPVLMNTLRADSER 360
           +RAGFVP LIDVLD   AE+QEHAAGALFSLSL+DENKMAIGILGALPVLMNTLR++SER
Sbjct: 301 LRAGFVPSLIDVLDSGYAESQEHAAGALFSLSLEDENKMAIGILGALPVLMNTLRSESER 360

Query: 361 TRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGCASRILLILCNIAASVDGRSA 420
           TRNDSALCLYHLTLNPSNRVKLVKLGAVPILLS TRIEG ASRILLILCN+A   DGRSA
Sbjct: 361 TRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSSTRIEGSASRILLILCNLAVCADGRSA 420

Query: 421 MLDANAVGCLVEILKEKDIDSESTRENCVVALYALSQGGFRFKGLAKEAGAVEVLREVEE 480
           MLDANAV CLV +L+EK+IDSESTRENCVVAL+ALSQGGFRFKGLAK AGAVEVLREVEE
Sbjct: 421 MLDANAVDCLVGMLREKEIDSESTRENCVVALHALSQGGFRFKGLAKAAGAVEVLREVEE 480

Query: 481 RGSERAREKAKRILQMMRTGGSGSVEIEGVGRNGLDAGGVSWTGRVGAGLNRFGSRSVEW 540
           RGSERAREKAKRIL+MMRTGGSGSVEIEGV R+GLDAGGVSWTGR GA LNR+ + + ++
Sbjct: 481 RGSERAREKAKRILEMMRTGGSGSVEIEGVRRHGLDAGGVSWTGRAGAALNRYSTNTTKF 532

[Close]

BLAST of Clc01G13840 vs. ExPASy Swiss-Prot
Match: Q9FJP6 (U-box domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=PUB38 PE=1 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 2.5e-126
Identity = 278/548 (50.73%), Postives = 368/548 (67.15%), Query Frame = 0


Query: 6   NHRLKLSIFHHRSSSDS-----KPERPKEYPEEYLCPISKSLMADPVVVSSGHTFERLSV 65
           N RL+ + F HRSSS +     + ++ ++ P E+LCPISKS+M+DPVVVSSG TFER+ V
Sbjct: 4   NGRLRWNPFSHRSSSSTSSSSRQQQQEQQPPVEFLCPISKSVMSDPVVVSSGQTFERVCV 63

Query: 66  QVCQDLGFSPKLEED-GSRPDFSSVITNRNMRFTILKWCDNNGIEHPQPPDYSSIELIVR 125
           QVC+DL F PKL +D  S PDFS++I N NM+ TI  WCD  G+  PQPPDYS++E I+R
Sbjct: 64  QVCRDLNFIPKLNDDEESLPDFSNIIPNLNMKSTIDTWCDTVGVSRPQPPDYSTVERILR 123

Query: 126 RLMEKQRQENRFEASDSELIRGVADKPQGVAVHATTEVGLRLNRFQLDSPPQKEEIVRES 185
           + M     E R   S+ EL+R VA +   +  HA +E+  R +     +   +  IV  S
Sbjct: 124 QQMPPPDVEIR--VSEQELLRAVAHRAPMIIHHADSELMGRRDFNNSTTSSDESVIVAHS 183

Query: 186 --TILPFKTQPSSYAAHSSSSSHGSFDRDPNHRGYSDSYSPNSEEESILILKFRSNDEFE 245
             T LP  T+P+ ++  S SSS    +   +H  +S+S S  +EE+ ++  K +S++ F+
Sbjct: 184 PFTPLPLTTRPACFSP-SPSSSSSEIETLTHHTFFSNSTSTATEEDEVIYNKLKSSEIFD 243

Query: 246 QREGVISLRKLTKSNESIRVSLCTKEFLAALLPLVLSRSTNIQINAVASVVNLSLEKPNK 305
           Q +G+I +RK+T++N+  RVSLC+   L+ L  +++SR + +Q NA+AS+VNLSL+K NK
Sbjct: 244 QEQGLIMMRKMTRTNDEARVSLCSPRILSLLKNMIVSRYSLVQTNALASLVNLSLDKKNK 303

Query: 306 LKIVRAGFVPPLIDVLDGRSAEAQEHAAGALFSLSLDDENKMAIGILGALPVLMNTLR-A 365
           L IVR GFVP LIDVL   S EAQEHAAG +FSLSL+D+NKM IG+LGAL  L++ LR A
Sbjct: 304 LTIVRLGFVPILIDVLKSGSREAQEHAAGTIFSLSLEDDNKMPIGVLGALQPLLHALRAA 363

Query: 366 DSERTRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGCASRILLILCNIAASVD 425
           +S+RTR+DSAL LYHLTLN +NR KLV+LGAVP L S+ R    ASR LL++CN+A   +
Sbjct: 364 ESDRTRHDSALALYHLTLNQTNRSKLVRLGAVPALFSMVRSGESASRALLVICNLACCSE 423

Query: 426 GRSAMLDANAVGCLVEILKEKDID-------SESTRENCVVALYALSQGGFRFKGLAKEA 485
           GRSAMLDANAV  LV  L+E+  +       S S RENCV AL+ALS    RFKGLAKEA
Sbjct: 424 GRSAMLDANAVAILVGKLREEWTEEPTEARSSSSARENCVAALFALSHESLRFKGLAKEA 483

Query: 486 GAVEVLREVEERGSERAREKAKRILQMMRTGGSGSVEIEGVGRNGLDA-----GGVSWTG 533
            AVEVL+EVEERG+ERAREKAK+ILQ+MR       E +G G    D      G +    
Sbjct: 484 RAVEVLKEVEERGTERAREKAKKILQLMRERVPEDDEEDGEGSIDWDRVIDSNGSIRSRF 543

[Close]

BLAST of Clc01G13840 vs. ExPASy Swiss-Prot
Match: Q0WUF6 (U-box domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=PUB41 PE=2 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 1.6e-112
Identity = 258/549 (46.99%), Postives = 339/549 (61.75%), Query Frame = 0


Query: 5   GNHRLKLSIFHHRSSSDSKPERPK----EYPEEYLCPISKSLMADPVVVSSGHTFERLSV 64
           G ++ +   FH RSSS +    P+    E P E+LCPI+  LM+DPVVVSSG TFERLSV
Sbjct: 2   GGNKQRWFSFHQRSSSATTTTLPQHKHDETPPEFLCPITGFLMSDPVVVSSGQTFERLSV 61

Query: 65  QVCQDLGFSPKLEEDGSRPDFSSVITNRNMRFTILKWCDNNGIEHPQPPDYSSIELIVRR 124
           QVC++LG+ P L  DG+RPD S+VI N  M+ TI  WCD   ++HP+PPD + +E +VR 
Sbjct: 62  QVCRNLGYIPDL-LDGTRPDLSTVIPNLAMKSTIFSWCDRQKVDHPRPPDAAYVEGVVRA 121

Query: 125 LMEKQRQENRFEA-------SDSELIRGVADKPQGVAVHATTEVGLRLNRFQLDSPPQKE 184
            M+K    +  ++        + E++  V +            +  R       +   + 
Sbjct: 122 RMDKDPNPSPGQSPGPGDKDPEPEILPPVEENSPSDYDAVMEAIRARSKNSMSPTTSLES 181

Query: 185 EIVRESTILPFKTQPSSYAAHSSSSSHGSF----DRDPNHRGYSD---SYSPNSEEESIL 244
             + +S+  P +   S +++ ++SSS G F        N   +S    S SP S EE  +
Sbjct: 182 VTIGQSSYHPVRA-VSMFSSSTTSSSSGVFAGADSPFRNAMSFSSTDHSSSPMSPEEEEI 241

Query: 245 ILKFRSNDEFEQREGVISLRKLTKSNESIRVSLCTKEFLAALLPLVLSRSTNIQINAVAS 304
             K R  D F+  +G+I LRK+T+S+E +RVSLCT   L+ L  L++SR   +Q NA AS
Sbjct: 242 FNKLRGTDIFDHEQGLILLRKMTRSSEDLRVSLCTDRILSFLRSLLVSRYNLVQTNAAAS 301

Query: 305 VVNLSLEKPNKLKIVRAGFVPPLIDVLDGRSAEAQEHAAGALFSLSLDDENKMAIGILGA 364
           VVNLSLEK NK+KIVR+GFVP LIDVL   + EAQEH AGALFSL+L+DENKM IG+LGA
Sbjct: 302 VVNLSLEKQNKVKIVRSGFVPLLIDVLKSGTTEAQEHVAGALFSLALEDENKMVIGVLGA 361

Query: 365 LPVLMNTLR-ADSERTRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGCASRIL 424
           +  L++ LR ++SER R D+AL LYHL+L PSNR +LV+ GAVP LLS+ R     SRIL
Sbjct: 362 VEPLLHALRSSESERARQDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVRSGDSTSRIL 421

Query: 425 LILCNIAASVDGRSAMLDANAVGCLVEILKE-KDIDSESTRENCVVALYALSQGGFRFKG 484
           L+LCN+AA  DG+ AMLD NAV  LV  L+E    DSE+ RENCV  L  L QG  RF+G
Sbjct: 422 LVLCNLAACPDGKGAMLDGNAVAILVGKLREVGGGDSEAARENCVAVLLTLCQGNLRFRG 481

Query: 485 LAKEAGAVEVLREVEERGSERAREKAKRILQMMRTGGSGSVEIEGVGRNGLDAGGVSWTG 533
           LA EAGA EVL EVEE G+ER +EKA +IL  MR GG G  E       G +A    W  
Sbjct: 482 LASEAGAEEVLMEVEENGNERVKEKASKILLAMRGGGGGESEF------GENAEAREWNR 541

[Close]

BLAST of Clc01G13840 vs. ExPASy Swiss-Prot
Match: Q9STT1 (U-box domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=PUB39 PE=1 SV=2)

HSP 1 Score: 402.5 bits (1033), Expect = 8.7e-111
Identity = 250/536 (46.64%), Postives = 335/536 (62.50%), Query Frame = 0


Query: 5   GNHRLKLSIFHHRSSSDS---KPERPKEYPEEYLCPISKSLMADPVVVSSGHTFERLSVQ 64
           G H+   S  HHRS+S +   +   P E P E+LCPI+  LM+DPVVV+SG TFER+SVQ
Sbjct: 5   GRHKW-FSFHHHRSASATTMPQHNSPGETPTEFLCPITGFLMSDPVVVASGQTFERISVQ 64

Query: 65  VCQDLGFSPKLEEDGSRPDFSSVITNRNMRFTILKWCDNNGIEHPQPPDYSSIELIVRRL 124
           VC++L F+PKL  DG++PD S+VI N  M+ TIL WCD N +EHP+PPDY+ +E +VR  
Sbjct: 65  VCRNLSFAPKL-HDGTQPDLSTVIPNLAMKSTILSWCDRNKMEHPRPPDYAYVEGVVRTR 124

Query: 125 MEKQRQENRFEASDSELIRGVADKPQGVAVHATTEVGLRLNRFQLDSPPQKEEIVRESTI 184
           M+     +    + SE++  VA+     + + +    +R          +    +  +T 
Sbjct: 125 MDSLPPGSGHRIAKSEILPPVAENSNSNSDYDSVMGAIR---------SRSRTSLSSTTS 184

Query: 185 LPF-KTQPSSYAAHSSSSSHGSFDRDPNHRGYSDSYSPNSEEESILILKFRSNDEFEQRE 244
           LP  +T+P +++    SS   S         YS S+ P S EE  +  K  S D  +  +
Sbjct: 185 LPLHQTRPINHSTRIQSSFSTS--------DYS-SFPPMSPEEEEIYNKLTSVDTIDHEQ 244

Query: 245 GVISLRKLTKSNESIRVSLCTKEFLAALLPLVLSRSTNIQINAVASVVNLSLEKPNKLKI 304
           G+I LRK T+SNE+ R+SLCT   L+ L  L++SR   +Q NA AS+VNLSLEKPNKLKI
Sbjct: 245 GLIQLRKTTRSNETTRISLCTDRILSLLRSLIVSRYNIVQTNAAASIVNLSLEKPNKLKI 304

Query: 305 VRAGFVPPLIDVLDGRSAEAQEHAAGALFSLSLDDENKMAIGILGALPVLMNTLR-ADSE 364
           VR+GFVP LIDVL   S EAQEH  GALFSL++++ENKM IG+LGA+  L++ LR ++SE
Sbjct: 305 VRSGFVPLLIDVLKSGSTEAQEHVIGALFSLAVEEENKMVIGVLGAVEPLLHALRSSESE 364

Query: 365 RTRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGCASRILLILCNIAASVDGRS 424
           R R D+AL LYHL+L P+NR +LVK GAVP++LS+ R    ASRILL+LCN+AA  +G+ 
Sbjct: 365 RARQDAALALYHLSLIPNNRSRLVKAGAVPMMLSMIRSGESASRILLLLCNLAACSEGKG 424

Query: 425 AMLDANAVGCLVEILKEKD--IDSESTRENCVVALYALSQGGFRFKGLAKEAGAVEVLRE 484
           AMLD NAV  LV  L+E        + RENCV AL  LS G  RF+GLA EAGA E+L E
Sbjct: 425 AMLDGNAVSILVGKLRESGGAESDAAARENCVGALLTLSVGNMRFRGLASEAGAEEILTE 484

Query: 485 V--EERGSERAREKAKRILQMMRTGGS------------GSVEIEGVGRNGLDAGG 520
           +   E GS R +EKA +ILQ +R GGS              +E  G+ R+    GG
Sbjct: 485 IVESESGSGRLKEKASKILQTLRGGGSEFGEGAEAREWNRMLEASGLSRSQFQQGG 520

[Close]

BLAST of Clc01G13840 vs. ExPASy Swiss-Prot
Match: Q9FL17 (U-box domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=PUB40 PE=2 SV=2)

HSP 1 Score: 390.2 bits (1001), Expect = 4.5e-107
Identity = 229/500 (45.80%), Postives = 311/500 (62.20%), Query Frame = 0


Query: 1   MVGHGNHRLKLSIFHHRSSSDSKPERPKEYPEEYLCPISKSLMADPVVVSSGHTFERLSV 60
           + G    R  LS     SSS++      E P E+LCPIS SLMADP++VSSGH++ER  V
Sbjct: 29  LAGKSKWRTSLSRSSSSSSSNNNSPTKTEIPAEFLCPISGSLMADPIIVSSGHSYERACV 88

Query: 61  QVCQDLGFSPKLEEDGSRPDFSSVITNRNMRFTILKWCDNNGIEHPQPPDYSSIELIVRR 120
             C+ LGF+P        PDFS+VI N  ++  I  WC+      P+P + ++ E ++  
Sbjct: 89  IACKTLGFTPT-----PPPDFSTVIPNLALKSAIHSWCERRCFPPPKPLNSAAAEKLILA 148

Query: 121 LMEKQRQENRFEASDSELIRGVADKPQGVAVHATTEVGLRLNRFQLDSPPQKEEIVREST 180
           LMEK+ Q  +   S+ ELI+ + DKP     HA TE+  R N F   S    E I   S 
Sbjct: 149 LMEKKPQRRKVSVSEKELIQAIRDKPSVRLNHAATELDRRPNYFNSSS---DESIASSSR 208

Query: 181 ILPFKTQPSSYAAHSSSSSHGSFDRDPNHRGYSDSYSPN-SEEESILILKFRSNDEFEQR 240
            L   T+PS +++ SS              G  +S  PN + EE  L+ K +SN   E  
Sbjct: 209 TLQLTTKPSCFSSPSS--------------GEIESLEPNLTPEEEALLTKLKSNRISEIE 268

Query: 241 EGVISLRKLTKSNESIRVSLCTKEFLAALLPLVLSRSTNIQINAVASVVNLSLEKPNKLK 300
           E +IS+R++T+ +ES R+SLCT   ++AL  L++SR   +Q+N  A +VNLSLEK NK+K
Sbjct: 269 EALISIRRITRIDESSRISLCTTRVISALKSLIVSRYATVQVNVTAVLVNLSLEKSNKVK 328

Query: 301 IVRAGFVPPLIDVLDGRSAEAQEHAAGALFSLSLDDENKMAIGILGALPVLMNTLRADSE 360
           IVR+G VPPLIDVL   S EAQEH+AG +FSL+L+DENK AIG+LG L  L++ +R  +E
Sbjct: 329 IVRSGIVPPLIDVLKCGSVEAQEHSAGVIFSLALEDENKTAIGVLGGLEPLLHLIRVGTE 388

Query: 361 RTRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGCASRILLILCNIAASVDGRS 420
            TR+DSAL LYHL+L  SNR KLVKLGAV +LL +  +     R+LLILCN+A+    R 
Sbjct: 389 LTRHDSALALYHLSLVQSNRGKLVKLGAVQMLLGMVSLGQMIGRVLLILCNMASCPVSRP 448

Query: 421 AMLDANAVGCLVEILKEKDIDSESTRENCVVALYALS-QGGFRFKGLAKEAGAVEVLREV 480
           A+LD+  V C+V +L+     +ESTRE+CV  LY LS  GG RFKGLA  A AVE L +V
Sbjct: 449 ALLDSGGVECMVGVLRRDREVNESTRESCVAVLYGLSHDGGLRFKGLAMAANAVEELVKV 506

Query: 481 EERGSERAREKAKRILQMMR 499
           E  G ERA++KA+R+L+++R
Sbjct: 509 ERSGRERAKQKARRVLEVLR 506

[Close]

BLAST of Clc01G13840 vs. ExPASy Swiss-Prot
Match: Q9ZV31 (U-box domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=PUB12 PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.3e-37
Identity = 148/488 (30.33%), Postives = 225/488 (46.11%), Query Frame = 0


Query: 31  PEEYLCPISKSLMADPVVVSSGHTFERLSVQVCQDLGF--SPKLEEDGSRPDFSSVIT-N 90
           PEE+ CPIS  LM DPV+VSSG T+ER  ++   + G    PK +E  +    S ++T N
Sbjct: 257 PEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLT----SDIMTPN 316

Query: 91  RNMRFTILKWCDNNGIEHPQPPDYSSIELIVRRLMEKQRQENRFEASDSELIRGVADKPQ 150
             +R  I +WC++NGIE P+ P+ S                                   
Sbjct: 317 YVLRSLIAQWCESNGIEPPKRPNIS----------------------------------- 376

Query: 151 GVAVHATTEVGLRLNRFQLDSPPQKEEIVRESTILPFKTQPSSYAAHSSSSSHGSFDRDP 210
                                                  QPSS A+ SSS+       D 
Sbjct: 377 ---------------------------------------QPSSKASSSSSAP------DD 436

Query: 211 NHRGYSDSYSPNSEEESILILKFRSNDEFEQREGVISLRKLTKSNESIRVSLCTKEFLAA 270
            H         N  EE  L+LK  S    ++R     +R L K N   RV++     +  
Sbjct: 437 EH---------NKIEE--LLLKLTSQQPEDRRSAAGEIRLLAKQNNHNRVAIAASGAIPL 496

Query: 271 LLPLV-LSRSTNIQINAVASVVNLSLEKPNKLKIV-RAGFVPPLIDVLDGRSAEAQEHAA 330
           L+ L+ +S  +  Q +AV S++NLS+ + NK KIV  +G VP ++ VL   S EA+E+AA
Sbjct: 497 LVNLLTISNDSRTQEHAVTSILNLSICQENKGKIVYSSGAVPGIVHVLQKGSMEARENAA 556

Query: 331 GALFSLSLDDENKMAIGILGALPVLMNTLRADSERTRNDSALCLYHLTLNPSNRVKLVKL 390
             LFSLS+ DENK+ IG  GA+P L+  L   S+R + D+A  L++L +   N+ K V+ 
Sbjct: 557 ATLFSLSVIDENKVTIGAAGAIPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRA 616

Query: 391 GAVPILLS-LTRIE-GCASRILLILCNIAASVDGRSAMLDANAVGCLVEILKEKDIDSES 450
           G VP+L+  LT  E G     L IL  +++  DG+S +  A+AV  LV+ ++     S  
Sbjct: 617 GLVPVLMRLLTEPESGMVDESLSILAILSSHPDGKSEVGAADAVPVLVDFIRS---GSPR 646

Query: 451 TRENCVVALYALSQGGFRFKGLAKEAGAVEVLREVEERGSERAREKAKRILQMMRTGGSG 510
            +EN    L  L     +    A++ G +++L E+ E G++R + KA ++L         
Sbjct: 677 NKENSAAVLVHLCSWNQQHLIEAQKLGIMDLLIEMAENGTDRGKRKAAQLLNRFSRFNDQ 646

Query: 511 SVEIEGVG 512
             +  G+G
Sbjct: 737 QKQHSGLG 646

[Close]

BLAST of Clc01G13840 vs. ExPASy TrEMBL
Match: A0A0A0LR64 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G045860 PE=4 SV=1)

HSP 1 Score: 919.8 bits (2376), Expect = 6.0e-264
Identity = 472/540 (87.41%), Postives = 506/540 (93.70%), Query Frame = 0


Query: 1   MVGHGNHRLKLSIFHHRSSSDSKPERPKEYPEEYLCPISKSLMADPVVVSSGHTFERLSV 60
           MVGHGNHRLKLSIFHHRSSSD KP+RPK+ P+EYLCPISKSLMADPVVVSSG TFERLSV
Sbjct: 1   MVGHGNHRLKLSIFHHRSSSDPKPQRPKDCPQEYLCPISKSLMADPVVVSSGQTFERLSV 60

Query: 61  QVCQDLGFSPKLEEDGSRPDFSSVITNRNMRFTILKWCDNNGIEHPQPPDYSSIELIVRR 120
           +VCQDLGFSP+LEED SR DFSSVITNRN+R TILKWCDNNGIEHPQPP Y+SIEL+VR+
Sbjct: 61  EVCQDLGFSPRLEEDDSRSDFSSVITNRNIRSTILKWCDNNGIEHPQPPSYTSIELVVRQ 120

Query: 121 LMEKQRQENRFEASDSELIRGVADKPQGVAVHATTEVGLRLNRFQLDSPPQKEEIVREST 180
           LM+K+ QENRFE SDS LIRGVADKP GVAVHATTEVGLRLNRFQL+SP Q EE++REST
Sbjct: 121 LMQKEEQENRFEVSDSALIRGVADKPTGVAVHATTEVGLRLNRFQLNSPEQTEEVIREST 180

Query: 181 ILPFKTQPSSYAAHSSSSSHGSFDRDPNHRGYSDSYSPNSEEESILILKFRSNDEFEQRE 240
           +LPFKTQPSSYA +S SSSHG  DRD NHRGYSDSY+PN EEES LILKFRSNDEFEQRE
Sbjct: 181 LLPFKTQPSSYATNSPSSSHGGIDRDSNHRGYSDSYAPNLEEESRLILKFRSNDEFEQRE 240

Query: 241 GVISLRKLTKSNESIRVSLCTKEFLAALLPLVLSRSTNIQINAVASVVNLSLEKPNKLKI 300
           GVISLRKLTKSNESIR SLCTKEFLAALLPL+LSRSTN+QINAVASVVNLSLEK NKLKI
Sbjct: 241 GVISLRKLTKSNESIRASLCTKEFLAALLPLILSRSTNVQINAVASVVNLSLEKANKLKI 300

Query: 301 VRAGFVPPLIDVLDGRSAEAQEHAAGALFSLSLDDENKMAIGILGALPVLMNTLRADSER 360
           VRAGFVPPLIDVLDG + E+QEHAAGALFSLSLDDENKMAIGILGALPVLMNTLR+DSER
Sbjct: 301 VRAGFVPPLIDVLDGGNTESQEHAAGALFSLSLDDENKMAIGILGALPVLMNTLRSDSER 360

Query: 361 TRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGCASRILLILCNIAASVDGRSA 420
           TRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGC SRI+LILCNIA SVDGRSA
Sbjct: 361 TRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGCTSRIVLILCNIAVSVDGRSA 420

Query: 421 MLDANAVGCLVEILKEKDIDSESTRENCVVALYALSQGGFRFKGLAKEAGAVEVLREVEE 480
           MLDANAV CLV +LKEK++DSESTRENCVVALYALSQGGFRF+GLAKEAGAVEVLREVEE
Sbjct: 421 MLDANAVSCLVGLLKEKEMDSESTRENCVVALYALSQGGFRFRGLAKEAGAVEVLREVEE 480

Query: 481 RGSERAREKAKRILQMMRTGGSGSVEIEGVGRNGLDAGGVSWTGRVGAGLNRFGSRSVEW 540
           RGSERAREKAKRILQMMRTGGSGSVEIEGV ++GLD GGVSWTGRVG GLNR+ + + ++
Sbjct: 481 RGSERAREKAKRILQMMRTGGSGSVEIEGVVQHGLDMGGVSWTGRVGTGLNRYSTNTTKF 540

[Close]

BLAST of Clc01G13840 vs. ExPASy TrEMBL
Match: A0A5A7ULP5 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G00470 PE=4 SV=1)

HSP 1 Score: 906.4 bits (2341), Expect = 6.8e-260
Identity = 473/540 (87.59%), Postives = 502/540 (92.96%), Query Frame = 0


Query: 1   MVGHGNHRLKLSIFHHRSSSDSKPERPKEYPEEYLCPISKSLMADPVVVSSGHTFERLSV 60
           MVGHGNHRLKLSIFH RSSSDSKP+RPK+ P+EYLCPISKSLMADPVVVSSG TFERLSV
Sbjct: 1   MVGHGNHRLKLSIFHQRSSSDSKPQRPKDCPQEYLCPISKSLMADPVVVSSGQTFERLSV 60

Query: 61  QVCQDLGFSPKLEEDGSRPDFSSVITNRNMRFTILKWCDNNGIEHPQPPDYSSIELIVRR 120
           +VCQDLGFSP LEED SRPDFSSVITNRN+R TILKWCDNNGIEHPQPP Y+SIELIVR+
Sbjct: 61  KVCQDLGFSPMLEEDDSRPDFSSVITNRNIRSTILKWCDNNGIEHPQPPPYTSIELIVRQ 120

Query: 121 LMEKQRQENRFEASDSELIRGVADKPQGVAVHATTEVGLRLNRFQLDSPPQKEEIVREST 180
           LM+K+ QENRFEASDS LIR VADKP GVAVHATTEVGLR NRFQL+SP Q EE  REST
Sbjct: 121 LMQKEEQENRFEASDSALIRRVADKPTGVAVHATTEVGLRHNRFQLNSPEQTEETTREST 180

Query: 181 ILPFKTQPSSYAAHSSSSSHGSFDRDPNHRGYSDSYSPNSEEESILILKFRSNDEFEQRE 240
           +LPFKTQPSSYAA++SSSSHG FDRD NH GYSDS SPN EEES LILKFRSNDEFEQRE
Sbjct: 181 LLPFKTQPSSYAANASSSSHGGFDRDSNHGGYSDSDSPNLEEESRLILKFRSNDEFEQRE 240

Query: 241 GVISLRKLTKSNESIRVSLCTKEFLAALLPLVLSRSTNIQINAVASVVNLSLEKPNKLKI 300
           GVISLRKLTKSNESIR SLCTKEFLAALLPLVLSRS N+QINAVASVVNLSLEK NKLKI
Sbjct: 241 GVISLRKLTKSNESIRASLCTKEFLAALLPLVLSRSPNVQINAVASVVNLSLEKANKLKI 300

Query: 301 VRAGFVPPLIDVLDGRSAEAQEHAAGALFSLSLDDENKMAIGILGALPVLMNTLRADSER 360
           VRAGFVP LIDVLDG + E+QEHAAGALFSLSLDDENKMAIGILGALPVLMNTLR+DSER
Sbjct: 301 VRAGFVPLLIDVLDGGNTESQEHAAGALFSLSLDDENKMAIGILGALPVLMNTLRSDSER 360

Query: 361 TRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGCASRILLILCNIAASVDGRSA 420
           TRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGC SRI+LILCNIA SVDGRSA
Sbjct: 361 TRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGCTSRIVLILCNIAVSVDGRSA 420

Query: 421 MLDANAVGCLVEILKEKDIDSESTRENCVVALYALSQGGFRFKGLAKEAGAVEVLREVEE 480
           MLDANAVGCLV +LK+K +DSESTRENCVVALYALSQGGFRF+GLAKEAGAVEVLREVEE
Sbjct: 421 MLDANAVGCLVGLLKDKAMDSESTRENCVVALYALSQGGFRFRGLAKEAGAVEVLREVEE 480

Query: 481 RGSERAREKAKRILQMMRTGGSGSVEIEGVGRNGLDAGGVSWTGRVGAGLNRFGSRSVEW 540
           RG+ERAREKAKRILQMMRTGGSGSVEIEGV R+GLD  GVSWTGRVGAGLNR+ + + ++
Sbjct: 481 RGTERAREKAKRILQMMRTGGSGSVEIEGVVRHGLDTSGVSWTGRVGAGLNRYSTNTTKF 540

[Close]

BLAST of Clc01G13840 vs. ExPASy TrEMBL
Match: A0A5D3BJ60 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003420 PE=4 SV=1)

HSP 1 Score: 905.6 bits (2339), Expect = 1.2e-259
Identity = 473/540 (87.59%), Postives = 501/540 (92.78%), Query Frame = 0


Query: 1   MVGHGNHRLKLSIFHHRSSSDSKPERPKEYPEEYLCPISKSLMADPVVVSSGHTFERLSV 60
           MVGHGNHRLKLSIFH RSSSDSKP+RPK+ P+EYLCPISKSLMADPVVVSSG TFERLSV
Sbjct: 1   MVGHGNHRLKLSIFHQRSSSDSKPQRPKDCPQEYLCPISKSLMADPVVVSSGQTFERLSV 60

Query: 61  QVCQDLGFSPKLEEDGSRPDFSSVITNRNMRFTILKWCDNNGIEHPQPPDYSSIELIVRR 120
           QVCQDLGFSP LEED SRPDFSSVI NRN+R TILKWCDNNGIEHPQPP Y+SIELIVR+
Sbjct: 61  QVCQDLGFSPMLEEDDSRPDFSSVIINRNIRSTILKWCDNNGIEHPQPPPYTSIELIVRQ 120

Query: 121 LMEKQRQENRFEASDSELIRGVADKPQGVAVHATTEVGLRLNRFQLDSPPQKEEIVREST 180
           LM+K+ QENRFEASDS LIR VADKP GVAVHATTEVGLR NRFQL+SP Q EE  REST
Sbjct: 121 LMQKEEQENRFEASDSALIRRVADKPTGVAVHATTEVGLRHNRFQLNSPEQTEETTREST 180

Query: 181 ILPFKTQPSSYAAHSSSSSHGSFDRDPNHRGYSDSYSPNSEEESILILKFRSNDEFEQRE 240
           +LPFKTQPSSYAA++SSSSHG FDRD NH GYSDS SPN EEES LILKFRSNDEFEQRE
Sbjct: 181 LLPFKTQPSSYAANASSSSHGGFDRDSNHGGYSDSDSPNLEEESRLILKFRSNDEFEQRE 240

Query: 241 GVISLRKLTKSNESIRVSLCTKEFLAALLPLVLSRSTNIQINAVASVVNLSLEKPNKLKI 300
           GVISLRKLTKSNESIR SLCTKEFLAALLPLVLSRS N+QINAVASVVNLSLEK NKLKI
Sbjct: 241 GVISLRKLTKSNESIRASLCTKEFLAALLPLVLSRSPNVQINAVASVVNLSLEKANKLKI 300

Query: 301 VRAGFVPPLIDVLDGRSAEAQEHAAGALFSLSLDDENKMAIGILGALPVLMNTLRADSER 360
           VRAGFVP LIDVLDG + E+QEHAAGALFSLSLDDENKMAIGILGALPVLMNTLR+DSER
Sbjct: 301 VRAGFVPLLIDVLDGGNTESQEHAAGALFSLSLDDENKMAIGILGALPVLMNTLRSDSER 360

Query: 361 TRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGCASRILLILCNIAASVDGRSA 420
           TRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGC SRI+LILCNIA SVDGRSA
Sbjct: 361 TRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGCTSRIVLILCNIAVSVDGRSA 420

Query: 421 MLDANAVGCLVEILKEKDIDSESTRENCVVALYALSQGGFRFKGLAKEAGAVEVLREVEE 480
           MLDANAVGCLV +LK+K +DSESTRENCVVALYALSQGGFRF+GLAKEAGAVEVLREVEE
Sbjct: 421 MLDANAVGCLVGLLKDKAMDSESTRENCVVALYALSQGGFRFRGLAKEAGAVEVLREVEE 480

Query: 481 RGSERAREKAKRILQMMRTGGSGSVEIEGVGRNGLDAGGVSWTGRVGAGLNRFGSRSVEW 540
           RG+ERAREKAKRILQMMRTGGSGSVEIEGV R+GLD  GVSWTGRVGAGLNR+ + + ++
Sbjct: 481 RGTERAREKAKRILQMMRTGGSGSVEIEGVVRHGLDTSGVSWTGRVGAGLNRYSTNTTKF 540

[Close]

BLAST of Clc01G13840 vs. ExPASy TrEMBL
Match: A0A1S3AW21 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103483277 PE=4 SV=1)

HSP 1 Score: 905.6 bits (2339), Expect = 1.2e-259
Identity = 473/540 (87.59%), Postives = 501/540 (92.78%), Query Frame = 0


Query: 1   MVGHGNHRLKLSIFHHRSSSDSKPERPKEYPEEYLCPISKSLMADPVVVSSGHTFERLSV 60
           MVGHGNHRLKLSIFH RSSSDSKP+RPK+ P+EYLCPISKSLMADPVVVSSG TFERLSV
Sbjct: 1   MVGHGNHRLKLSIFHQRSSSDSKPQRPKDCPQEYLCPISKSLMADPVVVSSGQTFERLSV 60

Query: 61  QVCQDLGFSPKLEEDGSRPDFSSVITNRNMRFTILKWCDNNGIEHPQPPDYSSIELIVRR 120
           QVCQDLGFSP LEED SRPDFSSVI NRN+R TILKWCDNNGIEHPQPP Y+SIELIVR+
Sbjct: 61  QVCQDLGFSPMLEEDDSRPDFSSVIINRNIRSTILKWCDNNGIEHPQPPPYTSIELIVRQ 120

Query: 121 LMEKQRQENRFEASDSELIRGVADKPQGVAVHATTEVGLRLNRFQLDSPPQKEEIVREST 180
           LM+K+ QENRFEASDS LIR VADKP GVAVHATTEVGLR NRFQL+SP Q EE  REST
Sbjct: 121 LMQKEEQENRFEASDSALIRRVADKPTGVAVHATTEVGLRHNRFQLNSPEQTEETTREST 180

Query: 181 ILPFKTQPSSYAAHSSSSSHGSFDRDPNHRGYSDSYSPNSEEESILILKFRSNDEFEQRE 240
           +LPFKTQPSSYAA++SSSSHG FDRD NH GYSDS SPN EEES LILKFRSNDEFEQRE
Sbjct: 181 LLPFKTQPSSYAANASSSSHGGFDRDSNHGGYSDSDSPNLEEESRLILKFRSNDEFEQRE 240

Query: 241 GVISLRKLTKSNESIRVSLCTKEFLAALLPLVLSRSTNIQINAVASVVNLSLEKPNKLKI 300
           GVISLRKLTKSNESIR SLCTKEFLAALLPLVLSRS N+QINAVASVVNLSLEK NKLKI
Sbjct: 241 GVISLRKLTKSNESIRASLCTKEFLAALLPLVLSRSPNVQINAVASVVNLSLEKANKLKI 300

Query: 301 VRAGFVPPLIDVLDGRSAEAQEHAAGALFSLSLDDENKMAIGILGALPVLMNTLRADSER 360
           VRAGFVP LIDVLDG + E+QEHAAGALFSLSLDDENKMAIGILGALPVLMNTLR+DSER
Sbjct: 301 VRAGFVPLLIDVLDGGNTESQEHAAGALFSLSLDDENKMAIGILGALPVLMNTLRSDSER 360

Query: 361 TRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGCASRILLILCNIAASVDGRSA 420
           TRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGC SRI+LILCNIA SVDGRSA
Sbjct: 361 TRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGCTSRIVLILCNIAVSVDGRSA 420

Query: 421 MLDANAVGCLVEILKEKDIDSESTRENCVVALYALSQGGFRFKGLAKEAGAVEVLREVEE 480
           MLDANAVGCLV +LK+K +DSESTRENCVVALYALSQGGFRF+GLAKEAGAVEVLREVEE
Sbjct: 421 MLDANAVGCLVGLLKDKAMDSESTRENCVVALYALSQGGFRFRGLAKEAGAVEVLREVEE 480

Query: 481 RGSERAREKAKRILQMMRTGGSGSVEIEGVGRNGLDAGGVSWTGRVGAGLNRFGSRSVEW 540
           RG+ERAREKAKRILQMMRTGGSGSVEIEGV R+GLD  GVSWTGRVGAGLNR+ + + ++
Sbjct: 481 RGTERAREKAKRILQMMRTGGSGSVEIEGVVRHGLDTSGVSWTGRVGAGLNRYSTNTTKF 540

[Close]

BLAST of Clc01G13840 vs. ExPASy TrEMBL
Match: A0A6J1E734 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111431320 PE=4 SV=1)

HSP 1 Score: 870.2 bits (2247), Expect = 5.4e-249
Identity = 460/540 (85.19%), Postives = 496/540 (91.85%), Query Frame = 0


Query: 1   MVGHGNHRLKLSIFHHRSSSDSKPERPKEYPEEYLCPISKSLMADPVVVSSGHTFERLSV 60
           MVGHGNHRLKLSIFHHRSSSDSKPERP EYP EYLC ISKSLMADPVVVSSG TFERL +
Sbjct: 1   MVGHGNHRLKLSIFHHRSSSDSKPERPVEYPREYLCEISKSLMADPVVVSSGQTFERLCI 60

Query: 61  QVCQDLGFSPKLEEDGSRPDFSSVITNRNMRFTILKWCDNNGIEHPQPPDYSSIELIVRR 120
           QVCQ+LGFSPKL EDGSR DF+SVITNRNMRFTILKWCD+NGIEHP+PP Y+SIEL+VR+
Sbjct: 61  QVCQELGFSPKL-EDGSRLDFTSVITNRNMRFTILKWCDDNGIEHPRPPLYTSIELVVRQ 120

Query: 121 LMEKQRQENRFEASDSELIRGVADKPQGVAVHATTEVGLRLNRFQLDSPPQKEEIVREST 180
           LMEK+RQENRFEASDSEL+RGVADKP GVAVHATTEVG R+NRFQL+SPP+ EEIVREST
Sbjct: 121 LMEKERQENRFEASDSELLRGVADKPAGVAVHATTEVGFRVNRFQLNSPPETEEIVREST 180

Query: 181 ILPFKTQPSSYAAHSSSSSHGSFDRDPNHRGYSDSYSPNSEEESILILKFRSNDEFEQRE 240
           ILPFKTQPS YAAHSSSSS  SFD     RG SDSY+PNSEEES LI+KFRS DE EQ+E
Sbjct: 181 ILPFKTQPSCYAAHSSSSS--SFD-----RGSSDSYTPNSEEESRLIMKFRSGDECEQQE 240

Query: 241 GVISLRKLTKSNESIRVSLCTKEFLAALLPLVLSRSTNIQINAVASVVNLSLEKPNKLKI 300
           GVISLRKLTKSNES R S+CTKEFLAALLPLV SRSTNIQINAVASVVNLSLEK NKLKI
Sbjct: 241 GVISLRKLTKSNESTRASICTKEFLAALLPLVSSRSTNIQINAVASVVNLSLEKSNKLKI 300

Query: 301 VRAGFVPPLIDVLDGRSAEAQEHAAGALFSLSLDDENKMAIGILGALPVLMNTLRADSER 360
           +RAGFVP LIDVLD   AE+QEHAAGALFSLSL+DENKMAIGILGALPVLMNTLR++SER
Sbjct: 301 LRAGFVPSLIDVLDSGYAESQEHAAGALFSLSLEDENKMAIGILGALPVLMNTLRSESER 360

Query: 361 TRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGCASRILLILCNIAASVDGRSA 420
           TRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRI+G ASRILLILCN+A   DGRSA
Sbjct: 361 TRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIDGSASRILLILCNLAVCADGRSA 420

Query: 421 MLDANAVGCLVEILKEKDIDSESTRENCVVALYALSQGGFRFKGLAKEAGAVEVLREVEE 480
           MLDANAV CLV +L+EK++DSESTRENCVVAL+ALSQGGFRFKGLAK AGAVEVLREVEE
Sbjct: 421 MLDANAVDCLVGMLREKEMDSESTRENCVVALHALSQGGFRFKGLAKAAGAVEVLREVEE 480

Query: 481 RGSERAREKAKRILQMMRTGGSGSVEIEGVGRNGLDAGGVSWTGRVGAGLNRFGSRSVEW 540
           RGSERAREKAKRIL+MMRTGGSGSVEIEGV R+GLDAGGVSWTGR GA LNR+ + + ++
Sbjct: 481 RGSERAREKAKRILEMMRTGGSGSVEIEGVRRHGLDAGGVSWTGRAGAALNRYSTNTTKF 532

[Close]

BLAST of Clc01G13840 vs. TAIR 10
Match: AT5G65200.1 (plant U-box 38 )

HSP 1 Score: 454.1 bits (1167), Expect = 1.8e-127
Identity = 278/548 (50.73%), Postives = 368/548 (67.15%), Query Frame = 0


Query: 6   NHRLKLSIFHHRSSSDS-----KPERPKEYPEEYLCPISKSLMADPVVVSSGHTFERLSV 65
           N RL+ + F HRSSS +     + ++ ++ P E+LCPISKS+M+DPVVVSSG TFER+ V
Sbjct: 4   NGRLRWNPFSHRSSSSTSSSSRQQQQEQQPPVEFLCPISKSVMSDPVVVSSGQTFERVCV 63

Query: 66  QVCQDLGFSPKLEED-GSRPDFSSVITNRNMRFTILKWCDNNGIEHPQPPDYSSIELIVR 125
           QVC+DL F PKL +D  S PDFS++I N NM+ TI  WCD  G+  PQPPDYS++E I+R
Sbjct: 64  QVCRDLNFIPKLNDDEESLPDFSNIIPNLNMKSTIDTWCDTVGVSRPQPPDYSTVERILR 123

Query: 126 RLMEKQRQENRFEASDSELIRGVADKPQGVAVHATTEVGLRLNRFQLDSPPQKEEIVRES 185
           + M     E R   S+ EL+R VA +   +  HA +E+  R +     +   +  IV  S
Sbjct: 124 QQMPPPDVEIR--VSEQELLRAVAHRAPMIIHHADSELMGRRDFNNSTTSSDESVIVAHS 183

Query: 186 --TILPFKTQPSSYAAHSSSSSHGSFDRDPNHRGYSDSYSPNSEEESILILKFRSNDEFE 245
             T LP  T+P+ ++  S SSS    +   +H  +S+S S  +EE+ ++  K +S++ F+
Sbjct: 184 PFTPLPLTTRPACFSP-SPSSSSSEIETLTHHTFFSNSTSTATEEDEVIYNKLKSSEIFD 243

Query: 246 QREGVISLRKLTKSNESIRVSLCTKEFLAALLPLVLSRSTNIQINAVASVVNLSLEKPNK 305
           Q +G+I +RK+T++N+  RVSLC+   L+ L  +++SR + +Q NA+AS+VNLSL+K NK
Sbjct: 244 QEQGLIMMRKMTRTNDEARVSLCSPRILSLLKNMIVSRYSLVQTNALASLVNLSLDKKNK 303

Query: 306 LKIVRAGFVPPLIDVLDGRSAEAQEHAAGALFSLSLDDENKMAIGILGALPVLMNTLR-A 365
           L IVR GFVP LIDVL   S EAQEHAAG +FSLSL+D+NKM IG+LGAL  L++ LR A
Sbjct: 304 LTIVRLGFVPILIDVLKSGSREAQEHAAGTIFSLSLEDDNKMPIGVLGALQPLLHALRAA 363

Query: 366 DSERTRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGCASRILLILCNIAASVD 425
           +S+RTR+DSAL LYHLTLN +NR KLV+LGAVP L S+ R    ASR LL++CN+A   +
Sbjct: 364 ESDRTRHDSALALYHLTLNQTNRSKLVRLGAVPALFSMVRSGESASRALLVICNLACCSE 423

Query: 426 GRSAMLDANAVGCLVEILKEKDID-------SESTRENCVVALYALSQGGFRFKGLAKEA 485
           GRSAMLDANAV  LV  L+E+  +       S S RENCV AL+ALS    RFKGLAKEA
Sbjct: 424 GRSAMLDANAVAILVGKLREEWTEEPTEARSSSSARENCVAALFALSHESLRFKGLAKEA 483

Query: 486 GAVEVLREVEERGSERAREKAKRILQMMRTGGSGSVEIEGVGRNGLDA-----GGVSWTG 533
            AVEVL+EVEERG+ERAREKAK+ILQ+MR       E +G G    D      G +    
Sbjct: 484 RAVEVLKEVEERGTERAREKAKKILQLMRERVPEDDEEDGEGSIDWDRVIDSNGSIRSRF 543

[Close]

BLAST of Clc01G13840 vs. TAIR 10
Match: AT5G62560.1 (RING/U-box superfamily protein with ARM repeat domain )

HSP 1 Score: 408.3 bits (1048), Expect = 1.1e-113
Identity = 258/549 (46.99%), Postives = 339/549 (61.75%), Query Frame = 0


Query: 5   GNHRLKLSIFHHRSSSDSKPERPK----EYPEEYLCPISKSLMADPVVVSSGHTFERLSV 64
           G ++ +   FH RSSS +    P+    E P E+LCPI+  LM+DPVVVSSG TFERLSV
Sbjct: 2   GGNKQRWFSFHQRSSSATTTTLPQHKHDETPPEFLCPITGFLMSDPVVVSSGQTFERLSV 61

Query: 65  QVCQDLGFSPKLEEDGSRPDFSSVITNRNMRFTILKWCDNNGIEHPQPPDYSSIELIVRR 124
           QVC++LG+ P L  DG+RPD S+VI N  M+ TI  WCD   ++HP+PPD + +E +VR 
Sbjct: 62  QVCRNLGYIPDL-LDGTRPDLSTVIPNLAMKSTIFSWCDRQKVDHPRPPDAAYVEGVVRA 121

Query: 125 LMEKQRQENRFEA-------SDSELIRGVADKPQGVAVHATTEVGLRLNRFQLDSPPQKE 184
            M+K    +  ++        + E++  V +            +  R       +   + 
Sbjct: 122 RMDKDPNPSPGQSPGPGDKDPEPEILPPVEENSPSDYDAVMEAIRARSKNSMSPTTSLES 181

Query: 185 EIVRESTILPFKTQPSSYAAHSSSSSHGSF----DRDPNHRGYSD---SYSPNSEEESIL 244
             + +S+  P +   S +++ ++SSS G F        N   +S    S SP S EE  +
Sbjct: 182 VTIGQSSYHPVRA-VSMFSSSTTSSSSGVFAGADSPFRNAMSFSSTDHSSSPMSPEEEEI 241

Query: 245 ILKFRSNDEFEQREGVISLRKLTKSNESIRVSLCTKEFLAALLPLVLSRSTNIQINAVAS 304
             K R  D F+  +G+I LRK+T+S+E +RVSLCT   L+ L  L++SR   +Q NA AS
Sbjct: 242 FNKLRGTDIFDHEQGLILLRKMTRSSEDLRVSLCTDRILSFLRSLLVSRYNLVQTNAAAS 301

Query: 305 VVNLSLEKPNKLKIVRAGFVPPLIDVLDGRSAEAQEHAAGALFSLSLDDENKMAIGILGA 364
           VVNLSLEK NK+KIVR+GFVP LIDVL   + EAQEH AGALFSL+L+DENKM IG+LGA
Sbjct: 302 VVNLSLEKQNKVKIVRSGFVPLLIDVLKSGTTEAQEHVAGALFSLALEDENKMVIGVLGA 361

Query: 365 LPVLMNTLR-ADSERTRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGCASRIL 424
           +  L++ LR ++SER R D+AL LYHL+L PSNR +LV+ GAVP LLS+ R     SRIL
Sbjct: 362 VEPLLHALRSSESERARQDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVRSGDSTSRIL 421

Query: 425 LILCNIAASVDGRSAMLDANAVGCLVEILKE-KDIDSESTRENCVVALYALSQGGFRFKG 484
           L+LCN+AA  DG+ AMLD NAV  LV  L+E    DSE+ RENCV  L  L QG  RF+G
Sbjct: 422 LVLCNLAACPDGKGAMLDGNAVAILVGKLREVGGGDSEAARENCVAVLLTLCQGNLRFRG 481

Query: 485 LAKEAGAVEVLREVEERGSERAREKAKRILQMMRTGGSGSVEIEGVGRNGLDAGGVSWTG 533
           LA EAGA EVL EVEE G+ER +EKA +IL  MR GG G  E       G +A    W  
Sbjct: 482 LASEAGAEEVLMEVEENGNERVKEKASKILLAMRGGGGGESEF------GENAEAREWNR 541

[Close]

BLAST of Clc01G13840 vs. TAIR 10
Match: AT3G47820.1 (PLANT U-BOX 39 )

HSP 1 Score: 396.4 bits (1017), Expect = 4.4e-110
Identity = 242/511 (47.36%), Postives = 323/511 (63.21%), Query Frame = 0


Query: 27  PKEYPEEYLCPISKSLMADPVVVSSGHTFERLSVQVCQDLGFSPKLEEDGSRPDFSSVIT 86
           P E P E+LCPI+  LM+DPVVV+SG TFER+SVQVC++L F+PKL  DG++PD S+VI 
Sbjct: 7   PGETPTEFLCPITGFLMSDPVVVASGQTFERISVQVCRNLSFAPKL-HDGTQPDLSTVIP 66

Query: 87  NRNMRFTILKWCDNNGIEHPQPPDYSSIELIVRRLMEKQRQENRFEASDSELIRGVADKP 146
           N  M+ TIL WCD N +EHP+PPDY+ +E +VR  M+     +    + SE++  VA+  
Sbjct: 67  NLAMKSTILSWCDRNKMEHPRPPDYAYVEGVVRTRMDSLPPGSGHRIAKSEILPPVAENS 126

Query: 147 QGVAVHATTEVGLRLNRFQLDSPPQKEEIVRESTILPF-KTQPSSYAAHSSSSSHGSFDR 206
              + + +    +R          +    +  +T LP  +T+P +++    SS   S   
Sbjct: 127 NSNSDYDSVMGAIR---------SRSRTSLSSTTSLPLHQTRPINHSTRIQSSFSTS--- 186

Query: 207 DPNHRGYSDSYSPNSEEESILILKFRSNDEFEQREGVISLRKLTKSNESIRVSLCTKEFL 266
                 YS S+ P S EE  +  K  S D  +  +G+I LRK T+SNE+ R+SLCT   L
Sbjct: 187 -----DYS-SFPPMSPEEEEIYNKLTSVDTIDHEQGLIQLRKTTRSNETTRISLCTDRIL 246

Query: 267 AALLPLVLSRSTNIQINAVASVVNLSLEKPNKLKIVRAGFVPPLIDVLDGRSAEAQEHAA 326
           + L  L++SR   +Q NA AS+VNLSLEKPNKLKIVR+GFVP LIDVL   S EAQEH  
Sbjct: 247 SLLRSLIVSRYNIVQTNAAASIVNLSLEKPNKLKIVRSGFVPLLIDVLKSGSTEAQEHVI 306

Query: 327 GALFSLSLDDENKMAIGILGALPVLMNTLR-ADSERTRNDSALCLYHLTLNPSNRVKLVK 386
           GALFSL++++ENKM IG+LGA+  L++ LR ++SER R D+AL LYHL+L P+NR +LVK
Sbjct: 307 GALFSLAVEEENKMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPNNRSRLVK 366

Query: 387 LGAVPILLSLTRIEGCASRILLILCNIAASVDGRSAMLDANAVGCLVEILKEKD--IDSE 446
            GAVP++LS+ R    ASRILL+LCN+AA  +G+ AMLD NAV  LV  L+E        
Sbjct: 367 AGAVPMMLSMIRSGESASRILLLLCNLAACSEGKGAMLDGNAVSILVGKLRESGGAESDA 426

Query: 447 STRENCVVALYALSQGGFRFKGLAKEAGAVEVLREV--EERGSERAREKAKRILQMMRTG 506
           + RENCV AL  LS G  RF+GLA EAGA E+L E+   E GS R +EKA +ILQ +R G
Sbjct: 427 AARENCVGALLTLSVGNMRFRGLASEAGAEEILTEIVESESGSGRLKEKASKILQTLRGG 486

Query: 507 GS------------GSVEIEGVGRNGLDAGG 520
           GS              +E  G+ R+    GG
Sbjct: 487 GSEFGEGAEAREWNRMLEASGLSRSQFQQGG 498

[Close]

BLAST of Clc01G13840 vs. TAIR 10
Match: AT5G40140.1 (RING/U-box superfamily protein with ARM repeat domain )

HSP 1 Score: 390.2 bits (1001), Expect = 3.2e-108
Identity = 229/500 (45.80%), Postives = 311/500 (62.20%), Query Frame = 0


Query: 1   MVGHGNHRLKLSIFHHRSSSDSKPERPKEYPEEYLCPISKSLMADPVVVSSGHTFERLSV 60
           + G    R  LS     SSS++      E P E+LCPIS SLMADP++VSSGH++ER  V
Sbjct: 29  LAGKSKWRTSLSRSSSSSSSNNNSPTKTEIPAEFLCPISGSLMADPIIVSSGHSYERACV 88

Query: 61  QVCQDLGFSPKLEEDGSRPDFSSVITNRNMRFTILKWCDNNGIEHPQPPDYSSIELIVRR 120
             C+ LGF+P        PDFS+VI N  ++  I  WC+      P+P + ++ E ++  
Sbjct: 89  IACKTLGFTPT-----PPPDFSTVIPNLALKSAIHSWCERRCFPPPKPLNSAAAEKLILA 148

Query: 121 LMEKQRQENRFEASDSELIRGVADKPQGVAVHATTEVGLRLNRFQLDSPPQKEEIVREST 180
           LMEK+ Q  +   S+ ELI+ + DKP     HA TE+  R N F   S    E I   S 
Sbjct: 149 LMEKKPQRRKVSVSEKELIQAIRDKPSVRLNHAATELDRRPNYFNSSS---DESIASSSR 208

Query: 181 ILPFKTQPSSYAAHSSSSSHGSFDRDPNHRGYSDSYSPN-SEEESILILKFRSNDEFEQR 240
            L   T+PS +++ SS              G  +S  PN + EE  L+ K +SN   E  
Sbjct: 209 TLQLTTKPSCFSSPSS--------------GEIESLEPNLTPEEEALLTKLKSNRISEIE 268

Query: 241 EGVISLRKLTKSNESIRVSLCTKEFLAALLPLVLSRSTNIQINAVASVVNLSLEKPNKLK 300
           E +IS+R++T+ +ES R+SLCT   ++AL  L++SR   +Q+N  A +VNLSLEK NK+K
Sbjct: 269 EALISIRRITRIDESSRISLCTTRVISALKSLIVSRYATVQVNVTAVLVNLSLEKSNKVK 328

Query: 301 IVRAGFVPPLIDVLDGRSAEAQEHAAGALFSLSLDDENKMAIGILGALPVLMNTLRADSE 360
           IVR+G VPPLIDVL   S EAQEH+AG +FSL+L+DENK AIG+LG L  L++ +R  +E
Sbjct: 329 IVRSGIVPPLIDVLKCGSVEAQEHSAGVIFSLALEDENKTAIGVLGGLEPLLHLIRVGTE 388

Query: 361 RTRNDSALCLYHLTLNPSNRVKLVKLGAVPILLSLTRIEGCASRILLILCNIAASVDGRS 420
            TR+DSAL LYHL+L  SNR KLVKLGAV +LL +  +     R+LLILCN+A+    R 
Sbjct: 389 LTRHDSALALYHLSLVQSNRGKLVKLGAVQMLLGMVSLGQMIGRVLLILCNMASCPVSRP 448

Query: 421 AMLDANAVGCLVEILKEKDIDSESTRENCVVALYALS-QGGFRFKGLAKEAGAVEVLREV 480
           A+LD+  V C+V +L+     +ESTRE+CV  LY LS  GG RFKGLA  A AVE L +V
Sbjct: 449 ALLDSGGVECMVGVLRRDREVNESTRESCVAVLYGLSHDGGLRFKGLAMAANAVEELVKV 506

Query: 481 EERGSERAREKAKRILQMMR 499
           E  G ERA++KA+R+L+++R
Sbjct: 509 ERSGRERAKQKARRVLEVLR 506

[Close]

BLAST of Clc01G13840 vs. TAIR 10
Match: AT2G28830.1 (PLANT U-BOX 12 )

HSP 1 Score: 160.2 bits (404), Expect = 5.3e-39
Identity = 149/494 (30.16%), Postives = 228/494 (46.15%), Query Frame = 0


Query: 31  PEEYLCPISKSLMADPVVVSSGHTFERLSVQVCQDLGF--SPKLEEDGSRPDFSSVIT-N 90
           PEE+ CPIS  LM DPV+VSSG T+ER  ++   + G    PK +E  +    S ++T N
Sbjct: 257 PEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLT----SDIMTPN 316

Query: 91  RNMRFTILKWCDNNGIEHPQPPDYSSIELIVRRLMEKQRQENRFEASDSELIRGVADKPQ 150
             +R  I +WC++NGIE P+ P+ S                                   
Sbjct: 317 YVLRSLIAQWCESNGIEPPKRPNIS----------------------------------- 376

Query: 151 GVAVHATTEVGLRLNRFQLDSPPQKEEIVRESTILPFKTQPSSYAAHSSSSSHGSFDRDP 210
                                                  QPSS A+ SSS+       D 
Sbjct: 377 ---------------------------------------QPSSKASSSSSAP------DD 436

Query: 211 NHRGYSDSYSPNSEEESILILKFRSNDEFEQREGVISLRKLTKSNESIRVSLCTKEFLAA 270
            H         N  EE  L+LK  S    ++R     +R L K N   RV++     +  
Sbjct: 437 EH---------NKIEE--LLLKLTSQQPEDRRSAAGEIRLLAKQNNHNRVAIAASGAIPL 496

Query: 271 LLPLV-LSRSTNIQINAVASVVNLSLEKPNKLKIV-RAGFVPPLIDVLDGRSAEAQEHAA 330
           L+ L+ +S  +  Q +AV S++NLS+ + NK KIV  +G VP ++ VL   S EA+E+AA
Sbjct: 497 LVNLLTISNDSRTQEHAVTSILNLSICQENKGKIVYSSGAVPGIVHVLQKGSMEARENAA 556

Query: 331 GALFSLSLDDENKMAIGILGALPVLMNTLRADSERTRNDSALCLYHLTLNPSNRVKLVKL 390
             LFSLS+ DENK+ IG  GA+P L+  L   S+R + D+A  L++L +   N+ K V+ 
Sbjct: 557 ATLFSLSVIDENKVTIGAAGAIPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRA 616

Query: 391 GAVPILLS-LTRIE-GCASRILLILCNIAASVDGRSAMLDANAVGCLVEILKEKDIDSES 450
           G VP+L+  LT  E G     L IL  +++  DG+S +  A+AV  LV+ ++     S  
Sbjct: 617 GLVPVLMRLLTEPESGMVDESLSILAILSSHPDGKSEVGAADAVPVLVDFIRS---GSPR 652

Query: 451 TRENCVVALYALSQGGFRFKGLAKEAGAVEVLREVEERGSERAREKAKRIL--------- 509
            +EN    L  L     +    A++ G +++L E+ E G++R + KA ++L         
Sbjct: 677 NKENSAAVLVHLCSWNQQHLIEAQKLGIMDLLIEMAENGTDRGKRKAAQLLNRFSRFNDQ 652

The following BLAST results are available for this feature:

BLAST of Clc01G13840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895164.1	4.2e-272	91.14	U-box domain-containing protein 38-like [Benincasa hispida]	[more]
XP_004152547.1	1.2e-263	87.41	U-box domain-containing protein 38 [Cucumis sativus] >KGN64288.1 hypothetical pr...	[more]
KAA0055206.1	1.4e-259	87.59	U-box domain-containing protein 38-like [Cucumis melo var. makuwa]	[more]
XP_008438058.1	2.4e-259	87.59	PREDICTED: U-box domain-containing protein 38-like [Cucumis melo] >TYJ99136.1 U-...	[more]
XP_023519818.1	2.9e-249	85.56	U-box domain-containing protein 38-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc01G13840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJP6	2.5e-126	50.73	U-box domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=PUB38 PE=1...	[more]
Q0WUF6	1.6e-112	46.99	U-box domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=PUB41 PE=2...	[more]
Q9STT1	8.7e-111	46.64	U-box domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=PUB39 PE=1...	[more]
Q9FL17	4.5e-107	45.80	U-box domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=PUB40 PE=2...	[more]
Q9ZV31	1.3e-37	30.33	U-box domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=PUB12 PE=2...	[more]

BLAST of Clc01G13840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LR64	6.0e-264	87.41	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G045860 PE...	[more]
A0A5A7ULP5	6.8e-260	87.59	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A5D3BJ60	1.2e-259	87.59	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3AW21	1.2e-259	87.59	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103483277 PE=4 ...	[more]
A0A6J1E734	5.4e-249	85.19	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111431320...	[more]

BLAST of Clc01G13840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65200.1	1.8e-127	50.73	plant U-box 38	[more]
AT5G62560.1	1.1e-113	46.99	RING/U-box superfamily protein with ARM repeat domain	[more]
AT3G47820.1	4.4e-110	47.36	PLANT U-BOX 39	[more]
AT5G40140.1	3.2e-108	45.80	RING/U-box superfamily protein with ARM repeat domain	[more]
AT2G28830.1	5.3e-39	30.16	PLANT U-BOX 12	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003613	U box domain	SMART	SM00504	Ubox_2	coord: 33..97 e-value: 1.6E-8 score: 44.3
IPR003613	U box domain	PFAM	PF04564	U-box	coord: 31..98 e-value: 4.6E-8 score: 33.1
IPR003613	U box domain	PROSITE	PS51698	U_BOX	coord: 29..104 score: 23.787853
IPR000225	Armadillo	SMART	SM00185	arm_5	coord: 334..374 e-value: 0.32 score: 20.0 coord: 414..457 e-value: 1.2 score: 18.1 coord: 375..413 e-value: 24.0 score: 10.2 coord: 293..333 e-value: 0.0052 score: 26.0
IPR000225	Armadillo	PFAM	PF00514	Arm	coord: 295..332 e-value: 2.5E-5 score: 24.1
IPR000225	Armadillo	PROSITE	PS50176	ARM_REPEAT	coord: 304..341 score: 9.9924
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 12..106 e-value: 3.2E-13 score: 51.3
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 219..399 e-value: 8.0E-28 score: 99.1
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 400..501 e-value: 2.9E-12 score: 48.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..202
None	No IPR available	PANTHER	PTHR23315:SF276	U-BOX DOMAIN-CONTAINING PROTEIN 38	coord: 1..504
None	No IPR available	PANTHER	PTHR23315	U BOX DOMAIN-CONTAINING	coord: 1..504
None	No IPR available	CDD	cd16453	RING-Ubox	coord: 35..71 e-value: 6.14367E-12 score: 58.2828
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 16..108
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 227..497

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G13840.2	Clc01G13840.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity