Clc01G09970 (gene) Watermelon (cordophanus) v2

Overview
NameClc01G09970
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionPhloem lectin
LocationClcChr01: 12329142 .. 12330425 (+)
RNA-Seq ExpressionClc01G09970
SyntenyClc01G09970
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTAGATTTCAAAATGAAACATATTTAGTCTTTATATTTCAAAAGATTACAACTGGAAATTCGAGTTTGATTTACAAAAGGAAAAAGAAAAAAAAAATATGGGAATGGATAATTTTCATGTCACACATTTCAAATATTGTTCCAAACAAGAGATTGTATATAAATACATTCTTCATTTCCAATGTTTATACACATCTCAATTTGGGTCAATCAAAATAGGCTCAAAATGGACCCCGAAGAGGTTGAAGCAAGAAAGTATTTAGGATTACAAGTGCAACTTGGGCATTGCTTATCTTATATTTTACCGCAGGCAGACGAAAAATTATTGTGGCCATCCTACATTCCGCTTTTTGATCAACTCGTTTATGGGATCTCCTTGAACAATGGAGCTCAGGCAAGTGTAACAATATATAATTTATTTTTACTTTATTTTAATTATTAGAATGCAAAAAATGAGTTTTAATTTCATTATTTTGAATGCAGAAGTACTATCTTAATAAGCAGACCAACAGTAATCGAGTGTATATACCGCCCAAATCACTCAATATAGCTTGGGGTCATGATCCCCGATACTGGAAATGGGAACTCCTTGAAGAGTGGGAGTATGATGTTTTAACCCCATATTTTATTTCTACATTCATTTTAAATTTTTTGTTGGAAACTAAACAAAAATATGAATACTAATTAATTCAAACCTTGTGCAGTAAGAGAGCACTCCTGGCAGTACTTATAAAAGTAAATTGGTTTGATGTTCGTGGATCGGTGAAGGCATCTTTGCTGTCATCAAGAATATTATATTTAGTAGCATTTGTGGTATATTTCAATGAGGATGCCCATGGATGGCATGTTCCTGTGAACCTGGTACTGAAGAAGCCAAATGGGTGCAAGATAGAGAGCAAAGTAAACATAGAGGGGAAGCCAAAAGGGGAATATTTCGAGGTAGATGCGGGCGAACTCATACTCGATAACTGCGGATGTGGTGATAGCGGCATCATCGAGTTTGCCATGTATGAACATGGAAGTCATGAGAAACGTGGGCTGGTCATGAAAGGTGTTATTCTTCGATCAAAGGCCTCAGATGGCTGCCCCCATGCTAACGTCAAGTAGTTGTAGTCTTTGATGACACAAATTCTCTCTTTCCAACTCCCAAACAATGAGAGACATACAACTACGTTTTATAAATATAATCAAATATATATTAAATATAGTATATGTAATAATAGCATACAAACATAAATAATATACACCGTTTGCATACTAGCAACACGGCCGGTTATCTTTTAA

mRNA sequence

TCTAGATTTCAAAATGAAACATATTTAGTCTTTATATTTCAAAAGATTACAACTGGAAATTCGAGTTTGATTTACAAAAGGAAAAAGAAAAAAAAAATATGGGAATGGATAATTTTCATGTCACACATTTCAAATATTGTTCCAAACAAGAGATTGTATATAAATACATTCTTCATTTCCAATGTTTATACACATCTCAATTTGGGTCAATCAAAATAGGCTCAAAATGGACCCCGAAGAGGTTGAAGCAAGAAAGTATTTAGGATTACAAGTGCAACTTGGGCATTGCTTATCTTATATTTTACCGCAGGCAGACGAAAAATTATTGTGGCCATCCTACATTCCGCTTTTTGATCAACTCGTTTATGGGATCTCCTTGAACAATGGAGCTCAGAAGTACTATCTTAATAAGCAGACCAACAGTAATCGAGTGTATATACCGCCCAAATCACTCAATATAGCTTGGGGTCATGATCCCCGATACTGGAAATGGGAACTCCTTGAAGAGTGGGATAAGAGAGCACTCCTGGCAGTACTTATAAAAGTAAATTGGTTTGATGTTCGTGGATCGGTGAAGGCATCTTTGCTGTCATCAAGAATATTATATTTAGTAGCATTTGTGGTATATTTCAATGAGGATGCCCATGGATGGCATGTTCCTGTGAACCTGGTACTGAAGAAGCCAAATGGGTGCAAGATAGAGAGCAAAGTAAACATAGAGGGGAAGCCAAAAGGGGAATATTTCGAGGTAGATGCGGGCGAACTCATACTCGATAACTGCGGATGTGGTGATAGCGGCATCATCGAGTTTGCCATGTATGAACATGGAAGTCATGAGAAACGTGGGCTGGTCATGAAAGGTGTTATTCTTCGATCAAAGGCCTCAGATGGCTGCCCCCATGCTAACGTCAAGTAGTTGTAGTCTTTGATGACACAAATTCTCTCTTTCCAACTCCCAAACAATGAGAGACATACAACTACGTTTTATAAATATAATCAAATATATATTAAATATAGTATATGTAATAATAGCATACAAACATAAATAATATACACCGTTTGCATACTAGCAACACGGCCGGTTATCTTTTAA

Coding sequence (CDS)

ATGTTTATACACATCTCAATTTGGGTCAATCAAAATAGGCTCAAAATGGACCCCGAAGAGGTTGAAGCAAGAAAGTATTTAGGATTACAAGTGCAACTTGGGCATTGCTTATCTTATATTTTACCGCAGGCAGACGAAAAATTATTGTGGCCATCCTACATTCCGCTTTTTGATCAACTCGTTTATGGGATCTCCTTGAACAATGGAGCTCAGAAGTACTATCTTAATAAGCAGACCAACAGTAATCGAGTGTATATACCGCCCAAATCACTCAATATAGCTTGGGGTCATGATCCCCGATACTGGAAATGGGAACTCCTTGAAGAGTGGGATAAGAGAGCACTCCTGGCAGTACTTATAAAAGTAAATTGGTTTGATGTTCGTGGATCGGTGAAGGCATCTTTGCTGTCATCAAGAATATTATATTTAGTAGCATTTGTGGTATATTTCAATGAGGATGCCCATGGATGGCATGTTCCTGTGAACCTGGTACTGAAGAAGCCAAATGGGTGCAAGATAGAGAGCAAAGTAAACATAGAGGGGAAGCCAAAAGGGGAATATTTCGAGGTAGATGCGGGCGAACTCATACTCGATAACTGCGGATGTGGTGATAGCGGCATCATCGAGTTTGCCATGTATGAACATGGAAGTCATGAGAAACGTGGGCTGGTCATGAAAGGTGTTATTCTTCGATCAAAGGCCTCAGATGGCTGCCCCCATGCTAACGTCAAGTAG

Protein sequence

MFIHISIWVNQNRLKMDPEEVEARKYLGLQVQLGHCLSYILPQADEKLLWPSYIPLFDQLVYGISLNNGAQKYYLNKQTNSNRVYIPPKSLNIAWGHDPRYWKWELLEEWDKRALLAVLIKVNWFDVRGSVKASLLSSRILYLVAFVVYFNEDAHGWHVPVNLVLKKPNGCKIESKVNIEGKPKGEYFEVDAGELILDNCGCGDSGIIEFAMYEHGSHEKRGLVMKGVILRSKASDGCPHANVK
Homology
BLAST of Clc01G09970 vs. NCBI nr
Match: WP_219729244.1 (PP2 domain-containing protein, partial [Pectobacterium odoriferum] >POE05059.1 hypothetical protein BV921_23310, partial [Pectobacterium odoriferum])

HSP 1 Score: 497.7 bits (1280), Expect = 5.9e-137
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0

Query: 11  QNRLKMDPEEVEARKYLGLQVQLGHCLSYILPQADEKLLWPSYIPLFDQLVYGISLNNGA 70
           QNRLKMDPEEVEARKYLGLQVQLGHCLSYILPQADEKLLWPSYIPLFDQLVYGISLNNGA
Sbjct: 1   QNRLKMDPEEVEARKYLGLQVQLGHCLSYILPQADEKLLWPSYIPLFDQLVYGISLNNGA 60

Query: 71  QKYYLNKQTNSNRVYIPPKSLNIAWGHDPRYWKWELLEEWDKRALLAVLIKVNWFDVRGS 130
           QKYYLNKQTNSNRVYIPPKSLNIAWGHDPRYWKWELLEEWDKRALLAVLIKVNWFDVRGS
Sbjct: 61  QKYYLNKQTNSNRVYIPPKSLNIAWGHDPRYWKWELLEEWDKRALLAVLIKVNWFDVRGS 120

Query: 131 VKASLLSSRILYLVAFVVYFNEDAHGWHVPVNLVLKKPNGCKIESKVNIEGKPKGEYFEV 190
           VKASLLSSRILYLVAFVVYFNEDAHGWHVPVNLVLKKPNGCKIESKVNIEGKPKGEYFEV
Sbjct: 121 VKASLLSSRILYLVAFVVYFNEDAHGWHVPVNLVLKKPNGCKIESKVNIEGKPKGEYFEV 180

Query: 191 DAGELILDNCGCGDSGIIEFAMYEHGSHEKRGLVMKGVILRSKASDGCPHANVK 245
           DAGELILDNCGCGDSGIIEFAMYEHGSHEKRGLVMKGVILRSKASDGCPHANVK
Sbjct: 181 DAGELILDNCGCGDSGIIEFAMYEHGSHEKRGLVMKGVILRSKASDGCPHANVK 234

BLAST of Clc01G09970 vs. NCBI nr
Match: WP_181002512.1 (PP2 domain-containing protein, partial [Pectobacterium odoriferum] >POE16080.1 hypothetical protein BV923_23560, partial [Pectobacterium odoriferum])

HSP 1 Score: 371.7 bits (953), Expect = 4.8e-99
Identity = 173/174 (99.43%), Postives = 174/174 (100.00%), Query Frame = 0

Query: 71  QKYYLNKQTNSNRVYIPPKSLNIAWGHDPRYWKWELLEEWDKRALLAVLIKVNWFDVRGS 130
           +KYYLNKQTNSNRVYIPPKSLNIAWGHDPRYWKWELLEEWDKRALLAVLIKVNWFDVRGS
Sbjct: 5   EKYYLNKQTNSNRVYIPPKSLNIAWGHDPRYWKWELLEEWDKRALLAVLIKVNWFDVRGS 64

Query: 131 VKASLLSSRILYLVAFVVYFNEDAHGWHVPVNLVLKKPNGCKIESKVNIEGKPKGEYFEV 190
           VKASLLSSRILYLVAFVVYFNEDAHGWHVPVNLVLKKPNGCKIESKVNIEGKPKGEYFEV
Sbjct: 65  VKASLLSSRILYLVAFVVYFNEDAHGWHVPVNLVLKKPNGCKIESKVNIEGKPKGEYFEV 124

Query: 191 DAGELILDNCGCGDSGIIEFAMYEHGSHEKRGLVMKGVILRSKASDGCPHANVK 245
           DAGELILDNCGCGDSGIIEFAMYEHGSHEKRGLVMKGVILRSKASDGCPHANVK
Sbjct: 125 DAGELILDNCGCGDSGIIEFAMYEHGSHEKRGLVMKGVILRSKASDGCPHANVK 178

BLAST of Clc01G09970 vs. NCBI nr
Match: XP_038893562.1 (lectin-like [Benincasa hispida])

HSP 1 Score: 310.5 bits (794), Expect = 1.3e-80
Identity = 138/225 (61.33%), Postives = 179/225 (79.56%), Query Frame = 0

Query: 16  MDPEEVEARKYLGLQVQLGHCLSYILPQADEKLLWPSYIPLFDQLVYGISLNNGAQKYYL 75
           MDPEE+EARKYLG+++  GH L  I   +D+KL  P+++PLFDQL+ G+S N G +K+ L
Sbjct: 1   MDPEELEARKYLGVKLSYGHNLDCIFSHSDDKLQNPTFVPLFDQLLDGVSFNQGTRKFRL 60

Query: 76  NKQTNSNRVYIPPKSLNIAWGHDPRYWKWELLEEWDKRALLAVLIKVNWFDVRGSVKASL 135
           N+ TNSNRV+I PK+L+IAW +D RYWKW ++ +         LI+V+WFD+ GSVKAS 
Sbjct: 61  NQPTNSNRVFILPKALSIAWVNDTRYWKWIIVTDNRNEVEAPQLIQVSWFDIHGSVKASW 120

Query: 136 LSSRILYLVAFVVYFNEDAHGWHVPVNLVLKKPNGCKIESKVNIEGKPKGEYFEVDAGEL 195
           LSSR++YLVAF+V   EDA GW+  VNL +KKPNGC +E+KV++EGKPKGE+FEV AG+ 
Sbjct: 121 LSSRVVYLVAFLVMLTEDASGWNHHVNLTIKKPNGCTVETKVSLEGKPKGEFFEVWAGDF 180

Query: 196 ILDNCGCGDSGIIEFAMYEHGSHEKRGLVMKGVILRSKASDGCPH 241
           ILDNCGCGDSG++EF MYEHG H KRGL++KGV++RSKAS GCPH
Sbjct: 181 ILDNCGCGDSGVVEFGMYEHGGHWKRGLIVKGVVIRSKASAGCPH 225

BLAST of Clc01G09970 vs. NCBI nr
Match: XP_008455252.1 (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A1-like [Cucumis melo])

HSP 1 Score: 221.1 bits (562), Expect = 1.1e-53
Identity = 99/213 (46.48%), Postives = 143/213 (67.14%), Query Frame = 0

Query: 23  ARKYLGLQVQLGHCLSYILPQADEKLLWPSYIPLFDQLVYGISLNNGAQKYYLNKQTNSN 82
           A++ LG +V+ GHCL  I   AD +L WPS+  L+ Q+ +GI L++G +KY L+K TN N
Sbjct: 8   AKEKLGAEVKYGHCLEVICKDADVQLHWPSFDELYAQVSHGIILHDGCKKYKLDKNTNCN 67

Query: 83  RVYIPPKSLNIAWGHDPRYWKWELLEEWDKRALLAVLIKVNWFDVRGSVKASLLSSRILY 142
              + PK L+IAW  D RYW+W  + E  +   +A L++V+WFD+R  + A+ LSSR++Y
Sbjct: 68  WWLVGPKCLSIAWIDDTRYWRWITINESGETWFVAELLQVSWFDMRAKISATALSSRVVY 127

Query: 143 LVAFVVYFNEDAHGWHVPVNLVLKKPNGCKIESKVNIEGKPKGEYFEVDAGELILDNCGC 202
              F++   + A GW VPV++ LK+PNGCKIESKV+++G  +GE+ E+  G+ I+DNC C
Sbjct: 128 DAIFIIMLTDRASGWEVPVSIELKRPNGCKIESKVSLQGVKRGEWVEIVVGDFIVDNCSC 187

Query: 203 GDSGIIEFAMYEHGSHEKRGLVMKGVILRSKAS 236
              G IE +MY+HG H KRGL  KGV  R + S
Sbjct: 188 ESGGEIEVSMYQHGGHWKRGLHCKGVEFRPRGS 220

BLAST of Clc01G09970 vs. NCBI nr
Match: AAA92465.1 (phloem protein 2 [Cucurbita argyrosperma])

HSP 1 Score: 219.2 bits (557), Expect = 4.0e-53
Identity = 112/223 (50.22%), Postives = 147/223 (65.92%), Query Frame = 0

Query: 16  MDPEEVEARKYLGLQVQLGHCLSYILPQADEKLLWPSYIPLFDQLVYGISLNNGAQKYYL 75
           MD +E EAR+ LG +V+LGHCL  IL  AD  L +PS++ L+DQLV GI LN GA KY  
Sbjct: 1   MDSKEKEAREKLGREVKLGHCLDVILKNADVALHYPSFLKLYDQLVAGILLNKGAIKYIF 60

Query: 76  NKQTNSNRVYIPPKSLNIAWGHDPRYWKWELLEEWDKRALLAVLIKVNWFDVRGSVKASL 135
           +K+ NS+  +I  ++L+IAW  D RYWKW    E      +A LI+V+W D+RG +K S+
Sbjct: 61  DKKLNSHWYFIFARALSIAWIEDKRYWKWGSCNE------IAELIQVSWLDIRGKIKESM 120

Query: 136 LSSRILYLVAFVVYFNEDAHGWHVPVNLVLKKPNGCKIESKVNIEGKPKGEYFEVDAGEL 195
           LS  I+Y VA  V  N  A GW+ P+N+ LKKPNG KIE +  + GKPK ++FE+   E 
Sbjct: 121 LSPNIVYEVALQVQLNSGASGWNHPMNIELKKPNGSKIERQECLLGKPKNQWFEI-VIEF 180

Query: 196 ILDNCGCGDSGIIEFAMYEHGSHEKRGLVMKGVILRSKASDGC 239
            +DN GCG SG IEF  YEHG H K GL++KGV + +K   GC
Sbjct: 181 KVDNHGCGSSGEIEFGFYEHGGHWKSGLLVKGVRIGAKGC-GC 215

BLAST of Clc01G09970 vs. ExPASy Swiss-Prot
Match: C0HJV2 (Lectin OS=Luffa acutangula OX=56866 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.5e-34
Identity = 77/209 (36.84%), Postives = 122/209 (58.37%), Query Frame = 0

Query: 27  LGLQVQLGHCLSYILPQAD-EKLLWPSYIPLFDQLVYGISLNNGAQKYYLNKQTNSNRVY 86
           +G +V++GH L  IL   D +    PS+I L+DQ+  GI LNN  ++Y+ +K   SN   
Sbjct: 4   VGGEVKVGHNLEAILKGLDVDVYSVPSFIKLYDQVTAGIFLNNRTKRYWFDKNAESNCFM 63

Query: 87  IPPKSLNIAWGHDPRYWKWELLEEWDKRALLAVLIKVNWFDVRGSVKASLLSSRILYLVA 146
           +  + L I W  D RYW+W   +E      +A LI V W ++ G+++ S+LS  I Y  A
Sbjct: 64  LYARDLLITWSQDKRYWRWNPFQEHGNTLEVAELIDVCWLNIVGNIETSVLSPGISYEAA 123

Query: 147 FVVYFNEDAHGWHVPVNLVLKKPNGCKIESKVNIEGKPKGEYFEVDAGELILDNCGCGDS 206
           F V     A GW +PV++ LK P+G + ES+VN++ KP+G +F +  G         G++
Sbjct: 124 FEVMLTNSASGWRIPVDVKLKMPDGSEQESQVNLQDKPRGVWFFISVGHF---KISVGET 183

Query: 207 -GIIEFAMYEHGSHEKRGLVMKGVILRSK 234
            G IEF++ +H    KRGL++KG++++ K
Sbjct: 184 IGNIEFSIVQH-QEAKRGLLVKGLVIQPK 208

BLAST of Clc01G09970 vs. ExPASy Swiss-Prot
Match: O81865 (Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana OX=3702 GN=PP2A1 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.0e-22
Identity = 72/207 (34.78%), Postives = 104/207 (50.24%), Query Frame = 0

Query: 31  VQLGHCLSYILPQADEKLLWPSYIPLFDQLVYGISLNNGAQKYYLNKQTNSNRVYIPPKS 90
           V+  H    IL  AD  +   S + L +QL  G+ L    Q  Y   + NSN   +  K+
Sbjct: 43  VKSPHNCEAILRDADPPISLSS-VNLSEQLRSGVFLKPKKQIKYWVDERNSNCFMLFAKN 102

Query: 91  LNIAWGHDPRYWKWELLEEWDKRALLAVLIK-VNWFDVRGSVKASLLSSRILYLVAFVVY 150
           L+I W  D  YW W   +E     + AV +K V W D+ G      L+  I+Y V F V 
Sbjct: 103 LSITWSDDVNYWTWFTEKESPNENVEAVGLKNVCWLDITGKFDTRNLTPGIVYEVVFKVK 162

Query: 151 FNEDAHGWHVPVNLVLKKPNGCK--IESKVNIEGKPKGEYFEVDAGELILDNCGCGDSGI 210
             + A+GW  PVNL L  PNG +   E KV++   P+ ++ +V  GE + +    G+   
Sbjct: 163 LEDPAYGWDTPVNLKLVLPNGKEKPQEKKVSLRELPRYKWVDVRVGEFVPEKSAAGE--- 222

Query: 211 IEFAMYEHGSHE-KRGLVMKGVILRSK 234
           I F+MYEH +   K+GL +KGV +R K
Sbjct: 223 ITFSMYEHAAGVWKKGLSLKGVAIRPK 245

BLAST of Clc01G09970 vs. ExPASy Swiss-Prot
Match: P0DSP5 (Lectin OS=Coccinia grandis OX=387127 PE=1 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.2e-17
Identity = 45/157 (28.66%), Postives = 82/157 (52.23%), Query Frame = 0

Query: 77  KQTNSNRVYIPPKSLNIAWGHDPRYWKWELLEEWDKRALLAVLIKVNWFDVRGSVKASLL 136
           ++ +S    + P++  + W  D RYW W  ++    +   A L +V+WFD R +V  + L
Sbjct: 4   EKLSSTHFLLFPRAATLTWSDDTRYWSWNPVDFCGYQLEEAQLSRVSWFDCRWTVNTTDL 63

Query: 137 SSRILYLVAFVVYFNEDAHGWHVPVNLVLKKPNGCKIESKVNIEGKPKGEYFEVDAGELI 196
            + + Y V   V     A GW+ P+NL L+ PNG K  S+V +  +P+  +F++  G L+
Sbjct: 64  KTNVWYNVFLKVQMGSGASGWNTPLNLELEMPNGSKQASQVVLNDRPRDVWFKLQMGNLM 123

Query: 197 L-DNCGCGDSGIIEFAMYEHGSHEKRGLVMKGVILRS 233
           + D+  C   G +  ++Y H ++ K G  +  + L +
Sbjct: 124 VSDSETC---GALRMSLYNHQTNWKMGATLGPLALEA 157

BLAST of Clc01G09970 vs. ExPASy Swiss-Prot
Match: Q949S5 (F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.9e-15
Identity = 60/199 (30.15%), Postives = 96/199 (48.24%), Query Frame = 0

Query: 51  PSYIPLFDQLVYGISLNNGAQKYYLNKQTNSNRVY-IPPKSLNIAWGHDPRYWKWELLEE 110
           P+   LF  LV    L NG    +  ++ + N+ Y +  ++LNI WGH+ RYW W  L  
Sbjct: 60  PTRKQLFFSLVDNPLLINGTLLSFSLERKSGNKCYMMAARALNIVWGHEQRYWHWISLPN 119

Query: 111 WDKRALLAVLIKVNWFDVRGSVKASLLSSRILYLVAFVVYFNEDAHGWHVPV--NLVLKK 170
             +   +A LI V W ++ G +  +LLS   LY   FV  +N   +G+  PV  +LVL  
Sbjct: 120 -TRFGEVAELIMVWWLEITGKINITLLSDDTLYAAYFVFKWNHSPYGFRQPVETSLVLAD 179

Query: 171 PNGC------KIESKVNIEGKPKGE--------YFEVDAGELILDNCGCGDSGIIEFAMY 230
                      + S +   G  +G+        ++EV+ G+        GD G IE ++ 
Sbjct: 180 TESTDNVVQPSMISLMQDSGGEEGQSPVLRRDGWYEVELGQFFKRR---GDLGEIEMSLK 239

Query: 231 E-HGSHEKRGLVMKGVILR 232
           E  G +EK+GL++ G+ +R
Sbjct: 240 ETKGPYEKKGLIVYGIEIR 254

BLAST of Clc01G09970 vs. ExPASy Swiss-Prot
Match: Q9C8U9 (Uncharacterized protein PHLOEM PROTEIN 2-LIKE A4 OS=Arabidopsis thaliana OX=3702 GN=PP2A4 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.2e-13
Identity = 52/151 (34.44%), Postives = 72/151 (47.68%), Query Frame = 0

Query: 89  KSLNIAWGHDPRYWKWELLE---EWDKRALLAVLIKVNWFDVRGSVKASLLSSRILYLVA 148
           + L+IAW     YW W  L      +K    AVL  V W DV G      L+    Y V 
Sbjct: 17  RDLSIAWSDKDEYWSWLPLRYDISSEKLVDAAVLEAVCWLDVNGKFDTRELTLETTYEVV 76

Query: 149 FVVYFNEDAHGWHVPVNLVLKKPNGCK--IESKVNIEGKPKGEYFEVDAGELILDNCGCG 208
           +VV   + A GW++PVNL L  P+G K   E  + ++      + ++ AGE +      G
Sbjct: 77  YVVKLEDTASGWNIPVNLKLTLPDGKKRPQERSMCLKEHIGKRWIDISAGEFVTSPDNAG 136

Query: 209 DSGIIEFAMYEHGS-HEKRGLVMKGVILRSK 234
           +   I F+MYE  S   KRGL +K V +R K
Sbjct: 137 E---ISFSMYETKSCCWKRGLFVKCVEIRPK 164

BLAST of Clc01G09970 vs. ExPASy TrEMBL
Match: A0A1S3C1Q4 (protein PHLOEM PROTEIN 2-LIKE A1-like OS=Cucumis melo OX=3656 GN=LOC103495460 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 5.1e-54
Identity = 99/213 (46.48%), Postives = 143/213 (67.14%), Query Frame = 0

Query: 23  ARKYLGLQVQLGHCLSYILPQADEKLLWPSYIPLFDQLVYGISLNNGAQKYYLNKQTNSN 82
           A++ LG +V+ GHCL  I   AD +L WPS+  L+ Q+ +GI L++G +KY L+K TN N
Sbjct: 8   AKEKLGAEVKYGHCLEVICKDADVQLHWPSFDELYAQVSHGIILHDGCKKYKLDKNTNCN 67

Query: 83  RVYIPPKSLNIAWGHDPRYWKWELLEEWDKRALLAVLIKVNWFDVRGSVKASLLSSRILY 142
              + PK L+IAW  D RYW+W  + E  +   +A L++V+WFD+R  + A+ LSSR++Y
Sbjct: 68  WWLVGPKCLSIAWIDDTRYWRWITINESGETWFVAELLQVSWFDMRAKISATALSSRVVY 127

Query: 143 LVAFVVYFNEDAHGWHVPVNLVLKKPNGCKIESKVNIEGKPKGEYFEVDAGELILDNCGC 202
              F++   + A GW VPV++ LK+PNGCKIESKV+++G  +GE+ E+  G+ I+DNC C
Sbjct: 128 DAIFIIMLTDRASGWEVPVSIELKRPNGCKIESKVSLQGVKRGEWVEIVVGDFIVDNCSC 187

Query: 203 GDSGIIEFAMYEHGSHEKRGLVMKGVILRSKAS 236
              G IE +MY+HG H KRGL  KGV  R + S
Sbjct: 188 ESGGEIEVSMYQHGGHWKRGLHCKGVEFRPRGS 220

BLAST of Clc01G09970 vs. ExPASy TrEMBL
Match: Q39461 (Phloem protein 2 OS=Cucurbita argyrosperma OX=34294 GN=PP2 PE=2 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.9e-53
Identity = 112/223 (50.22%), Postives = 147/223 (65.92%), Query Frame = 0

Query: 16  MDPEEVEARKYLGLQVQLGHCLSYILPQADEKLLWPSYIPLFDQLVYGISLNNGAQKYYL 75
           MD +E EAR+ LG +V+LGHCL  IL  AD  L +PS++ L+DQLV GI LN GA KY  
Sbjct: 1   MDSKEKEAREKLGREVKLGHCLDVILKNADVALHYPSFLKLYDQLVAGILLNKGAIKYIF 60

Query: 76  NKQTNSNRVYIPPKSLNIAWGHDPRYWKWELLEEWDKRALLAVLIKVNWFDVRGSVKASL 135
           +K+ NS+  +I  ++L+IAW  D RYWKW    E      +A LI+V+W D+RG +K S+
Sbjct: 61  DKKLNSHWYFIFARALSIAWIEDKRYWKWGSCNE------IAELIQVSWLDIRGKIKESM 120

Query: 136 LSSRILYLVAFVVYFNEDAHGWHVPVNLVLKKPNGCKIESKVNIEGKPKGEYFEVDAGEL 195
           LS  I+Y VA  V  N  A GW+ P+N+ LKKPNG KIE +  + GKPK ++FE+   E 
Sbjct: 121 LSPNIVYEVALQVQLNSGASGWNHPMNIELKKPNGSKIERQECLLGKPKNQWFEI-VIEF 180

Query: 196 ILDNCGCGDSGIIEFAMYEHGSHEKRGLVMKGVILRSKASDGC 239
            +DN GCG SG IEF  YEHG H K GL++KGV + +K   GC
Sbjct: 181 KVDNHGCGSSGEIEFGFYEHGGHWKSGLLVKGVRIGAKGC-GC 215

BLAST of Clc01G09970 vs. ExPASy TrEMBL
Match: Q8LK67 (Phloem lectin OS=Cucurbita argyrosperma subsp. sororia OX=37648 GN=PP2 PE=2 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 1.3e-52
Identity = 110/223 (49.33%), Postives = 149/223 (66.82%), Query Frame = 0

Query: 16  MDPEEVEARKYLGLQVQLGHCLSYILPQADEKLLWPSYIPLFDQLVYGISLNNGAQKYYL 75
           M+ +E EAR+ LG +V+LGHCL  IL  AD  L +PS++ L+DQLV GI LN GA KY  
Sbjct: 1   MNHKEKEAREKLGGEVKLGHCLDVILKNADVALHYPSFLKLYDQLVAGILLNKGAIKYIF 60

Query: 76  NKQTNSNRVYIPPKSLNIAWGHDPRYWKWELLEEWDKRALLAVLIKVNWFDVRGSVKASL 135
           +K++NSN  +I  ++L+IAW  D RYWKW    +      +A LI+V+W D+RG +  S+
Sbjct: 61  DKKSNSNWYFIFARALSIAWIEDKRYWKWGSCNK------IAELIQVSWLDIRGKINESM 120

Query: 136 LSSRILYLVAFVVYFNEDAHGWHVPVNLVLKKPNGCKIESKVNIEGKPKGEYFEVDAGEL 195
           LS  I+Y VA  V  N  A GW+ P+N+ LKKPNG KIE +  + GKPK ++FE+   E 
Sbjct: 121 LSPNIVYEVALQVQLNSGASGWNHPMNIELKKPNGSKIERQECLLGKPKNQWFEI-VIEF 180

Query: 196 ILDNCGCGDSGIIEFAMYEHGSHEKRGLVMKGVILRSKASDGC 239
            +DN GCG SG IEF+ +EHG H KRGL++KGV + +K   GC
Sbjct: 181 KVDNHGCGSSGEIEFSFFEHGGHWKRGLLVKGVRIGAKGC-GC 215

BLAST of Clc01G09970 vs. ExPASy TrEMBL
Match: A0A6J1EHQ4 (lectin-like OS=Cucurbita moschata OX=3662 GN=LOC111434188 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 6.3e-52
Identity = 109/223 (48.88%), Postives = 148/223 (66.37%), Query Frame = 0

Query: 16  MDPEEVEARKYLGLQVQLGHCLSYILPQADEKLLWPSYIPLFDQLVYGISLNNGAQKYYL 75
           MD +E EAR+ LG +V+LGHCL  IL  AD  L +PS++ L+DQLV GI LN GA KY  
Sbjct: 1   MDNKEREAREKLGGEVKLGHCLDVILKNADVALHYPSFVKLYDQLVAGILLNKGAIKYIF 60

Query: 76  NKQTNSNRVYIPPKSLNIAWGHDPRYWKWELLEEWDKRALLAVLIKVNWFDVRGSVKASL 135
           +K+ NS+  +I  ++L+IAW  D RYWKW         + +A LI+V+W D+RG +K  +
Sbjct: 61  DKKLNSHWYFIFARALSIAWIEDKRYWKWGSC----GNSNVAELIQVSWLDIRGKIKEFM 120

Query: 136 LSSRILYLVAFVVYFNEDAHGWHVPVNLVLKKPNGCKIESKVNIEGKPKGEYFEVDAGEL 195
           LS  I+Y+VA  V  N  A GW++P+N+ LKKP+G KIE +  + GKPK ++FE+   E 
Sbjct: 121 LSPNIVYVVALEVQLNSGASGWNLPMNIELKKPDGSKIERQECLLGKPKNQWFEI-VIEF 180

Query: 196 ILDNCGCGDSGIIEFAMYEHGSHEKRGLVMKGVILRSKASDGC 239
            +DN GCG SG IEF  YEHG H K GL++KGV + +K   GC
Sbjct: 181 KVDNPGCGSSGEIEFGFYEHGGHWKSGLLVKGVRIGAKGC-GC 217

BLAST of Clc01G09970 vs. ExPASy TrEMBL
Match: Q39462 (Phloem protein 2 OS=Cucurbita argyrosperma OX=34294 GN=PP2 PE=2 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.1e-51
Identity = 109/219 (49.77%), Postives = 146/219 (66.67%), Query Frame = 0

Query: 20  EVEARKYLGLQVQLGHCLSYILPQADEKLLWPSYIPLFDQLVYGISLNNGAQKYYLNKQT 79
           E EAR+ LG +V+LGHCL  IL  AD  L +PS++ L+DQLV GI LN GA KY  +K++
Sbjct: 5   EKEAREKLGGEVKLGHCLDVILKNADVALHYPSFLKLYDQLVAGILLNKGAIKYIFDKKS 64

Query: 80  NSNRVYIPPKSLNIAWGHDPRYWKWELLEEWDKRALLAVLIKVNWFDVRGSVKASLLSSR 139
           NSN  +I  ++L+IAW  D RYWKW    +      +A LI+V+W D+RG +K S+LS  
Sbjct: 65  NSNWYFIFARALSIAWIEDKRYWKWGSCNK------IAELIQVSWLDIRGKIKESMLSPN 124

Query: 140 ILYLVAFVVYFNEDAHGWHVPVNLVLKKPNGCKIESKVNIEGKPKGEYFEVDAGELILDN 199
           I+Y VA  V  N  A GW+ P+N+ LKKPNG KIE +  + GKPK ++FE+   E  + N
Sbjct: 125 IVYEVALQVQLNSGASGWNHPMNIELKKPNGSKIERQECLLGKPKNQWFEI-VVEYKVGN 184

Query: 200 CGCGDSGIIEFAMYEHGSHEKRGLVMKGVILRSKASDGC 239
            GCG SG IEF+ +EHG H KRGL++KGV + +K   GC
Sbjct: 185 PGCGSSGEIEFSFFEHGGHWKRGLLVKGVRIGAKGC-GC 215

BLAST of Clc01G09970 vs. TAIR 10
Match: AT4G19840.1 (phloem protein 2-A1 )

HSP 1 Score: 108.6 bits (270), Expect = 7.1e-24
Identity = 72/207 (34.78%), Postives = 104/207 (50.24%), Query Frame = 0

Query: 31  VQLGHCLSYILPQADEKLLWPSYIPLFDQLVYGISLNNGAQKYYLNKQTNSNRVYIPPKS 90
           V+  H    IL  AD  +   S + L +QL  G+ L    Q  Y   + NSN   +  K+
Sbjct: 43  VKSPHNCEAILRDADPPISLSS-VNLSEQLRSGVFLKPKKQIKYWVDERNSNCFMLFAKN 102

Query: 91  LNIAWGHDPRYWKWELLEEWDKRALLAVLIK-VNWFDVRGSVKASLLSSRILYLVAFVVY 150
           L+I W  D  YW W   +E     + AV +K V W D+ G      L+  I+Y V F V 
Sbjct: 103 LSITWSDDVNYWTWFTEKESPNENVEAVGLKNVCWLDITGKFDTRNLTPGIVYEVVFKVK 162

Query: 151 FNEDAHGWHVPVNLVLKKPNGCK--IESKVNIEGKPKGEYFEVDAGELILDNCGCGDSGI 210
             + A+GW  PVNL L  PNG +   E KV++   P+ ++ +V  GE + +    G+   
Sbjct: 163 LEDPAYGWDTPVNLKLVLPNGKEKPQEKKVSLRELPRYKWVDVRVGEFVPEKSAAGE--- 222

Query: 211 IEFAMYEHGSHE-KRGLVMKGVILRSK 234
           I F+MYEH +   K+GL +KGV +R K
Sbjct: 223 ITFSMYEHAAGVWKKGLSLKGVAIRPK 245

BLAST of Clc01G09970 vs. TAIR 10
Match: AT1G80110.1 (phloem protein 2-B11 )

HSP 1 Score: 82.8 bits (203), Expect = 4.2e-16
Identity = 60/199 (30.15%), Postives = 96/199 (48.24%), Query Frame = 0

Query: 51  PSYIPLFDQLVYGISLNNGAQKYYLNKQTNSNRVY-IPPKSLNIAWGHDPRYWKWELLEE 110
           P+   LF  LV    L NG    +  ++ + N+ Y +  ++LNI WGH+ RYW W  L  
Sbjct: 60  PTRKQLFFSLVDNPLLINGTLLSFSLERKSGNKCYMMAARALNIVWGHEQRYWHWISLPN 119

Query: 111 WDKRALLAVLIKVNWFDVRGSVKASLLSSRILYLVAFVVYFNEDAHGWHVPV--NLVLKK 170
             +   +A LI V W ++ G +  +LLS   LY   FV  +N   +G+  PV  +LVL  
Sbjct: 120 -TRFGEVAELIMVWWLEITGKINITLLSDDTLYAAYFVFKWNHSPYGFRQPVETSLVLAD 179

Query: 171 PNGC------KIESKVNIEGKPKGE--------YFEVDAGELILDNCGCGDSGIIEFAMY 230
                      + S +   G  +G+        ++EV+ G+        GD G IE ++ 
Sbjct: 180 TESTDNVVQPSMISLMQDSGGEEGQSPVLRRDGWYEVELGQFFKRR---GDLGEIEMSLK 239

Query: 231 E-HGSHEKRGLVMKGVILR 232
           E  G +EK+GL++ G+ +R
Sbjct: 240 ETKGPYEKKGLIVYGIEIR 254

BLAST of Clc01G09970 vs. TAIR 10
Match: AT1G33920.1 (phloem protein 2-A4 )

HSP 1 Score: 77.0 bits (188), Expect = 2.3e-14
Identity = 52/151 (34.44%), Postives = 72/151 (47.68%), Query Frame = 0

Query: 89  KSLNIAWGHDPRYWKWELLE---EWDKRALLAVLIKVNWFDVRGSVKASLLSSRILYLVA 148
           + L+IAW     YW W  L      +K    AVL  V W DV G      L+    Y V 
Sbjct: 17  RDLSIAWSDKDEYWSWLPLRYDISSEKLVDAAVLEAVCWLDVNGKFDTRELTLETTYEVV 76

Query: 149 FVVYFNEDAHGWHVPVNLVLKKPNGCK--IESKVNIEGKPKGEYFEVDAGELILDNCGCG 208
           +VV   + A GW++PVNL L  P+G K   E  + ++      + ++ AGE +      G
Sbjct: 77  YVVKLEDTASGWNIPVNLKLTLPDGKKRPQERSMCLKEHIGKRWIDISAGEFVTSPDNAG 136

Query: 209 DSGIIEFAMYEHGS-HEKRGLVMKGVILRSK 234
           +   I F+MYE  S   KRGL +K V +R K
Sbjct: 137 E---ISFSMYETKSCCWKRGLFVKCVEIRPK 164

BLAST of Clc01G09970 vs. TAIR 10
Match: AT2G26820.1 (phloem protein 2-A3 )

HSP 1 Score: 68.9 bits (167), Expect = 6.3e-12
Identity = 53/167 (31.74%), Postives = 82/167 (49.10%), Query Frame = 0

Query: 76  NKQ--TNSNRVYIPPKSLNIAWGHDPRYWKWELLE---EWDKRALLAVLIKVNWFDVRGS 135
           NKQ    +NR+ I  + LNI W H   +WKW  L+     +    +A L+ V WFDV GS
Sbjct: 298 NKQLIAQANRM-ICARDLNIEWSHSEEHWKWVNLDHNISSNTFVEVAELLGVYWFDVSGS 357

Query: 136 VKASLLSSRILYLVAFVVYFNEDAHGWHVPVNLVL----KKPNGCKIESK-VNIEGKPKG 195
           +  + ++    Y V FVV   + A  W+  V + L     +P G   + + V++      
Sbjct: 358 LDTTEMAPWTHYEVLFVVNLKDSAFKWNAAVKMNLFYINSRPGGPGTQERAVDMRQHIGK 417

Query: 196 EYFEVDAGELILDNCGCGDSGIIEFAMYEHGSHEKR-GLVMKGVILR 232
            +  + AGE I       + G+I F M E  S + R GL++KGV++R
Sbjct: 418 GWVTIHAGEFITTP---ENVGLIGFRMSEVDSGDNRGGLIVKGVLIR 460

BLAST of Clc01G09970 vs. TAIR 10
Match: AT5G45090.1 (phloem protein 2-A7 )

HSP 1 Score: 68.9 bits (167), Expect = 6.3e-12
Identity = 47/165 (28.48%), Postives = 79/165 (47.88%), Query Frame = 0

Query: 74  YLNKQTNSNRVYIPPKSLNIAWGHDPRYWKWELLEEWDKRALL--AVLIKVNWFDVRGSV 133
           Y  K+ NS    +P + L ++       W W  + E    A +  A+L +V+W  + G+ 
Sbjct: 167 YREKEANSKCFMVPARKLQMSHSEKLINWTWSSIYETPNDAAIEVAMLNEVHWLHMSGNF 226

Query: 134 KASLLSSRILYLVAFVVYFNEDAHGWHVPVNLVLK--KPNGCKI--ESKVNIEGKPKGEY 193
               L+    Y V F+V  ++ + GW  PVNL LK   P+G +   E + ++E      +
Sbjct: 227 HTRNLTPGTKYEVVFLVSLDDTSSGWEQPVNLNLKVINPDGTESLQERETSLECHIGENW 286

Query: 194 FEVDAGELILDNCGCGDSGIIEFAMYEH-GSHEKRGLVMKGVILR 232
            ++ AG L+        +  + F MY++  S  K GLV+KGV +R
Sbjct: 287 VDIQAGVLVAPPRNA--AAKMTFTMYQYVTSDRKSGLVVKGVAIR 329

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
WP_219729244.15.9e-137100.00PP2 domain-containing protein, partial [Pectobacterium odoriferum] >POE05059.1 h... [more]
WP_181002512.14.8e-9999.43PP2 domain-containing protein, partial [Pectobacterium odoriferum] >POE16080.1 h... [more]
XP_038893562.11.3e-8061.33lectin-like [Benincasa hispida][more]
XP_008455252.11.1e-5346.48PREDICTED: protein PHLOEM PROTEIN 2-LIKE A1-like [Cucumis melo][more]
AAA92465.14.0e-5350.22phloem protein 2 [Cucurbita argyrosperma][more]
Match NameE-valueIdentityDescription
C0HJV21.5e-3436.84Lectin OS=Luffa acutangula OX=56866 PE=1 SV=1[more]
O818651.0e-2234.78Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana OX=3702 GN=PP2A1 PE=2 S... [more]
P0DSP52.2e-1728.66Lectin OS=Coccinia grandis OX=387127 PE=1 SV=1[more]
Q949S55.9e-1530.15F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1[more]
Q9C8U93.2e-1334.44Uncharacterized protein PHLOEM PROTEIN 2-LIKE A4 OS=Arabidopsis thaliana OX=3702... [more]
Match NameE-valueIdentityDescription
A0A1S3C1Q45.1e-5446.48protein PHLOEM PROTEIN 2-LIKE A1-like OS=Cucumis melo OX=3656 GN=LOC103495460 PE... [more]
Q394611.9e-5350.22Phloem protein 2 OS=Cucurbita argyrosperma OX=34294 GN=PP2 PE=2 SV=1[more]
Q8LK671.3e-5249.33Phloem lectin OS=Cucurbita argyrosperma subsp. sororia OX=37648 GN=PP2 PE=2 SV=1[more]
A0A6J1EHQ46.3e-5248.88lectin-like OS=Cucurbita moschata OX=3662 GN=LOC111434188 PE=4 SV=1[more]
Q394621.1e-5149.77Phloem protein 2 OS=Cucurbita argyrosperma OX=34294 GN=PP2 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT4G19840.17.1e-2434.78phloem protein 2-A1 [more]
AT1G80110.14.2e-1630.15phloem protein 2-B11 [more]
AT1G33920.12.3e-1434.44phloem protein 2-A4 [more]
AT2G26820.16.3e-1231.74phloem protein 2-A3 [more]
AT5G45090.16.3e-1228.48phloem protein 2-A7 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025886Phloem protein 2-likePFAMPF14299PP2coord: 84..231
e-value: 2.4E-25
score: 89.3
NoneNo IPR availablePANTHERPTHR32278FAMILY NOT NAMEDcoord: 56..231
NoneNo IPR availablePANTHERPTHR32278:SF42PROTEIN PHLOEM PROTEIN 2-LIKE A2coord: 56..231

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc01G09970.1Clc01G09970.1mRNA