Clc01G08280 (gene) Watermelon (cordophanus) v2

Overview
NameClc01G08280
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionPhosphoribosyl-AMP cyclohydrolase
LocationClcChr01: 8492485 .. 8503386 (-)
RNA-Seq ExpressionClc01G08280
SyntenyClc01G08280
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTGGTGAGCATGGTTGAAGCAATTGTAACTCAAAGCCCACATTTTTTTTTAAAAGCCCAGCCCAACTGGGAGAAACAATAAAACCTAAGTTAGGGCATCTCCTTCCACACTCAACGCTCCACTGCAGCACAGTACTTCCACCTCCACGCCTCCACGGCAAGGCAGCAACAAAGGGTAAAAATCATCACATTTTAATTATTTATTTATTTATATTGATCTTCAGTTACCCCTGTTTTGTTTGTAACCACGGGATTGTGAAGGATTTCAAATCGGAAATTGAAATGTGCTTGGAATGATTAGAAACCAAAACGATTTGAATCTTTTTTTGATCCAAAATTTTTTCCAATGAAAACAAGTCGGATTTTTCCAGATTTCAAATTGAAATTTCTACATGGGCCTCAGACCTCAGCATAAGGTTGCAGTAGAGAGTGAGATAAGAGAAAAAGAAACTAAAAGATGGATTGGCGGTTTGTAGTGACGTGCGGCTGATCTAGATCGTAGAAGAAAGAATGAAAGTCATAGGCCTAGGTTTGTTGTTTCCTTTTTAAAATTTAAATGTGTAATAAAAAAAAAAAAGGAAAAAATGACATTTCAATACTCCTTGAGAGGCACAATTTTAAGAGTATTTATTTTTTTAGTAGTTATAATAGCAAAAGAAAGTTGATTTCTTTTGATTTTTTCTTAACAATAAATTTTATTTTATTTTATTAAGTTGATTTTTTTTTTTAATAATATATAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATCATAGGGTTTAGTTATATAGGGCGTTGCATGGATTGCTACATGACTTGGGATGTTTAAGAAACGGTTATTAACTATGATCATTTCATTTTGAATTCTTTTGTACATGCATGTTCTTAACTTATCTTTTTACGGTGGTGCATTTTCAGATTGATCGTGAGGTTTTCTTATACCGCAATGTCGTATTTTGGATTCCAGTCTTTGACATTTTCGGGACCCCTTTTTGTATTCAACAATGTCTGTTTCAAGAAGTATAGATATAATCCTGCTTTTGTTTCAACAAGCAAATCGGACCTCTCACTTCAATCAAAGGTAGATATGTAGTTACTTTGTTCTCGTAGATAGGTAGAAATGTTGCACTATACTTTCATTTTGTCAACTTCTTGTAGTAATGATATTAAACGTGATAAGAAAACTTGTGCGTGGTTATGCAAGCCTTTGGCCATTGCACCTTCATGTGCTTTGTGCTAATAAAACACTGTTTTCATACAAGCCACTGGATACGTATGACATATGCTATTAAGTTGTAGATATTTTAAGAATGGGGATTTGGTTGAAGCCAGCATTCACATTTTTTTAAGAAAGAATTTTACCAGACTTAGTGAGGAATCTATCTTGTTTATTTGGTAGGGCCCGTTATATGTCTGGAACATAAAATGGGGAGATTAAATCAATATCTCCTCAAGGTGTTCATCGTTGCCCGATAATATTTGTTGTTGTTATGCGAGCTACATCTGGACTCCACATTCTATAGAATCCAACTCAGTTGCATCGACTGTGTTGGTATATTCTCGCTTTTCTTTGCATGATGTATTCATAATGTATGTGCTGTTGAGTATGTGCCTTTTGACCAGAAGGCTGCACTTTTGAACAGAAGGTTGCAGAAGTGCAGCTTATTCGCGATTAATATTGCACTGGATACATGGGGCTCGTGCTAAAAAACGGGGTTTTATAGATTCCATTTGATATGCAGGACATATGCCAATAAGGTACAAATATTTTAAGATAGGGTCATAACCATTACTGTTGTACTCTTTTGAATGCAATATTCATATTTTTTTGTGTACATTGCGTGATGAAGAATTTTACCAGACACAGTAAGGAATCTATCTTGTTCATTTGGTAGGGACCATAATATGTCTGGAAGATGAATTGGGGAGATTTGATCAAAATCTCTTAAAGGTGTTTATTGTTGCCCGATAATACATGTTTATTATTATACGAGCTACATCTAGACTCCACATTCTGTTCAAGTCCAACTCATTTGAGTTGATTTTATTGGTGTTTACCCACATTTCTTTGTATGATGGTACTCATGATGTGTTTGCTGTCCCTAATATGTTTTTTTTGAAAAGGAAGCTGCATGTCTAGTCTGATTTTTCTTTTTTGAAAATAGACATTTTGATTGCTCAAAGATCTGAGTAAAGAACAAGATTTCGTTAGTTCAACTTAGATCAATTGATTTTCTTGGTGTTTTCCTAAGAATTGTGGATGTGTCTGTGTTCAACATGTCTCAAACACTTAAACACTTCCACATTTGTTAGACACAAATGTGTTGGACATGTATTGATAAGCAGGCTTCAAGGACACATATATGATGATAATAACAAAATTTGAGTGTGATATACGCCATGAAGCACAAATATTTCATGTGAGGTAGAGAATCGGTATCGGATTTGTAAGAGGTACCAATATGCTCATATACTTCCCAGATGTGTATTTGATACATGATTTGGCATATATATGTATATTTGTTTAATTCTAATATTGGATATGTTTGTCCTTTGTGTGAAGGGGACACCTTGGACCTTTTTGCTTCTTCTTCTTCTTCTTCTTTTTTTTTTTTATTTTTTTTATTTTTTTTAATAAATAATTTAAATAAAAAAAGCAGCTCATTAGTCTCCTCCAACCTAATACTAAACAACCTATTTAAAAAACCCATTCTTCCGGCCCACAACTAAAAGACAAGAGAATAAAAAAATATAAAACCAAACTCTAAAATCATCGAATAATCATCTTCACGCAAGAGTACCACAAAGTCATGCAAAAAAATTCACTTGAATATCTTCAACAATTCAATGAAGAAGTTCTTTGTTTGTATTTGTACCTATCTTCTTCTAATCAATGACTTTGGTATGCTACCAACCTCTTCTATTGTTTAAAAATTGCACTAAGAACATCATTGAAGAACCCTGATCAAATTCAAGTTCTTTTATATATTTTTGTGTAAGATGGACCAATTGTAGATTTAAGAGGGTCTCTGGAAGACAACTTTTGCTAACCTAGACTCGCGCACATTGAATAATTCATTAGGTAACTCGACACTGGTTTGGTTAGTACATCAACTATCTGTTCAGTGGCTGGTAGATGGCGCACACAAATCCTTTTCTTAAACACAAGATCTTGTGCATAGTAGATACATGCTTTGTTTTAGAGTGCAAAATAGGTTTGGTATTAAGATGAATTGCACTCAAATTGTCCCACTGCAAAATAGGAGTATTAGTTAAAAGAATACATAACTCATTTAATAAGGAACGAATCTATACCATTTATGCAGCAACTAATGCAAGACAATGGTTCCAGCCTCAGTGTCAGTTCTTGAAATAGTAGTTTTTGTAGCAACCAAACAATCAAATTTCCTCCAAGAAAAACACAAAATTCATATGTGGATTTTCGATCATCTAGATAGGAAGCCCAGTCCTCATCAGCGAAGTCAAACAATGTCATATCATTAGGACATTTTAACAACAATCCATGGTCAGCCACTCCCATTTGGTATTTTAAGATCCTCTCAACAATTGCCAATGTAAAAAAATAGTAGAGTATGAATTGACATGGTTTCTATAATTGATAAACATCATGAAAAGATGGTCCATGTTTGGCCGATAAAATAGGACTACCCATCATAGGACTAATCAGTTTAGCCTTGTCCATTTTTGTTCTATGCAATAGGTCCATTATATATTTTGATTGGGATAAAAGCATCTCACCAGTCATAGGATAATATACTTCAATTTCCTAAGAAATAATCGAGCTCACCAAAATCAATTTCAGTAGACAAACTCCCTATAACTATGATATTATTATCACATTTGAACACATAACAACAAGCAGTAGGAGTAAAACGAATCAACAATGACGTATCGACTTTAGAAGGAGAAAGCCTAACTTTCAATCCATGGTGACCACCTACTTAGGAATTAATTTCCTACGAGTTTCCTTAACACCCAAATGTTGTAGGGTTAGGTGAGTTGTCCCGTGAGATTAGTCGAGTTGCGCGTAAGTTGGTCCGAACACTCACAAATAGATTAAAAAAAATAAGAAGTATGAAAGCCTAACTGATGCAAATAAGTACTTAATCGCTAATACCATGCTTGAGGGGCCTATTTAAGACCATATAAGGCCTTTTTAAGATGACAAACTAACGGTTGAGGACTAGACAATCAAAAACTAGAAGGTTGATCCATGAATACGGATTTAGTAAGAAATCCATGTAAAAAGGCATTATTCACATCAAGTTGTCTAATAGACCAAGCTTTCATTAAAGCTAGAGTTAACAACACTCTAACGGCTATAGGTTTCTTTGTGTAATCAACATCTCAGGGGTTTGATGAAAGCCTTAGCAACTAAACTTTAGTGCTTTATAACGAACAATAGCGCCATTAGAGTTCTTGTTTCTTTAAACTCCCATTTAAAATTTACGGTTTCTTATCATGTCTAGCTTTGGAATTAACTCCCATGTTTTGTTTTTAACTAGAGCATTGTATTTATCTTCCATAGCTTTCTTCCACTAAGTGTGTTTTAAAGCTTCTTTAACATCACATGGTTTAGTTTGAGTATAATCAACCTAGTAAATTTTAGGTTTAAAAATACCACTTTTACCTCAAGTCATCATAGGGTGAGTTGGAATGGGTTCCGTGGCGGCAACTTGAGGAGCATTAGTGGTACTTTGAGTTGCTCCATCTTGAGACCCTTCAAAGGAATCTGTGTCTAAAGGATGCACATTTGTAGGTATTGGATGATCAAGGTTTTGAGTAATTGGAACAATATTGTTTCTTAACTCTTTATGGTTCTACATCATTGTGGTTCTTAGTAGAAGTAGGTGTATATGAGGTATAAGAGAAGAGATAGGAGCTACAAGAGTAGCATCAAAAGAATTTTTGGGTTTGTTATGTGATATACATTTCATTAATTAGAACATGTCTTGGAATAAAAACCCGACCATTAAAAGATAGATATTCGTATCCTTTGCAAGAGTTGCTATGAGCCCCAAAACGTACATGGTGTAGAGCGCAAGGATAGTTTAAGAGAGTTGTAAGGTCTTAAATAGGGAAAAAATTTACACCCAAGGATTTTTAGTGAAGGATGATTGGGCTTAACACCAAATAACTTCTCCAAGGGACTAATGTAAGGTTGCGTAGGGTTCGGTAATCGGTTAATTGGATAAGCAACAGTAGTAAAGGTCTCATTCCAAAATGTCTATGTTCTGGTTTCGTCAATGTTCTCTACGCTACCCCAGGCGCATGCCTATGGCGACAGGCAAGGCGACCTAGGGTCATTGTGCCTTGAAGGTAGCCAAGGAGAGCTCCATCAATTGGGCGCTCGCTTTTCTGTGCATTCACCTTGTGTTAAGGTGAATGCACGATATTTAGCAATATATATACATATATTGCTTTTGGGGTTAAGAAATCAAAGATGGTGAGAAGAAATCATTAGTTGTTTAATCCTAATTTTTTTGGGTTTAAGAAGAAGAAAGATTGGAAAGGAAGAAAAAGAATCAGAGTTGATGAGACAAAAAGGAATAAGAAAAGAGTGAAAAAGAAATTGAAGAAACTGCGTGTACAAGCTTCAAAATCTCCCATGTCTTTCCCATTCTCACATTATCATGCAACACTAAAGAAGTAATTGCGTAGACGAAGTAGTAGCACCCACTCACATGCATGCTTCATTGCCATTTGTAGTAAAACAACCATGTGGCAGTATTACTAATTCTAATTCTTAGTTAGCAGCTTAGTGCTGTTTATGTGGCTGTATTACTAATTCTAGTTCTTTGTTGGTGGCTTAGTGCTATTTTTAACAAGTGTTTTGTTTAATTTCATTTAACCTTTTATTCATAACTTTATTGAATTAATTTACCAAATTTTTTATATATACATATACATATTTATTAAGTACGGCTAGCTTCACTCAGGCAACACATTTTTGTTGCCTCTCGCCTAGAGGCGATTATGAAACTTGTTGCCTTAAGATGCACCTTGCGCTTTGAAAACGTTTTCTGGTTTTTGTTCCATTATCCCATTTTGTTGAGATGTACGCGGACAAGTAATGCCATGAAGTGATGACTTAGAATTTAAAATATTAAACCAAGTACAATGGCTATGGACATCCATGAAACGAATATAGTACTGAAATCCATTACGATAAAGAGTACAAGCAGGACCTCATAAATCACACACCTTAAGTTGTAAAGGAGCAGTATACATAGACGTGGAATTAGGAAACTGTGTTTTCCTAAAGTGCAAACATTCTAGAAGCTCATTTTATTTATATTCACTCTTGACTCTGAGATGCTTGAATGGTTGAAGAACAGACTTAACAACAGGGAAATGGGGATGGCCATGCCTGTGCCAAATGTCAACCGTCTCAATAGCTGAAGAGTATGATATAGTGGAGACAACATTCAACCCTTAGTAGAAGAACATTTAGTAGTCTCATGTATTGGTGTAACATTGAAATGATGAAGACCCTCATGAAGTGTCCCTTGGAGTAGTACATGGCTAGTAATTCGATCCTTTCACGTAACAAAAATTTGGGTGCTTAAAAAGAAAATTATGATACTCTAGTAGGCAGGGCACCAATTACTCTCAATGCTTAAATTAGGGTAAGTCACCAAATTTGATTAGAGGATATAGGTAAATTTGTTGGAAGAAAATCTGAGGTTTGTTGATTGTTGAGGCAATATGCCCAAATTTTGTGCAAATCTAGCACTAAGGCTTATTTCTATTATTCCAAGAGTTGTTTGTTTGACCTCCTCAATTTCCATGACCTTTTTCACGTCATGTTCGACTTTGATTATTTTGTTTCGACGAATGGTCTCCCTCTCTCTGATATGTTTCGGATATGTTTGAAGTAAGATTAGAAGGCGGCAAAGAGCCATAGGGCTGGTAATATTACTCTCTATTTGTGTTTCTTGAGTAAGTAAGAGAGGAATATTTTCTTTAATAGGAGAATCAGTTGAAGTAGAAATGACATAAATGACAGAAACCATAGATTCATATTTGAACCACAAACTAGCAAGTATGTATAAAATATGATAATCAATAGAAGTGGTCTTATGCATATATGCTTAAGCATCAACACACTGTAGGATCTTCATAGGACACTCCTTGAGAGGCATTGCCCCCTTCTCAAGTTTGTTTTTAAATTGCATAGATTGAGCAAGACTTCTTGTTGAGTAAATATCTTGTAGAGTGGACCATATCTTTTTCGTTGAAGTACAGTGAAGCATTGGGAATTAGGATATCTTTTGTCATTGATTCGAGATGCCAAGGTGGAATAAGATGATCTTGATATTTCCATTTCTTATATTTGGGGTTCAGATTTTGAGTTGTAGAAGAGGAAGTTGCATTATTTGGTGTGTTAGAAACTTCGAAGGTGGTTCAACATCTCCTTCGATAAAATTTTCCTTATTGTATCCTTTTAGGGTAGTGAACACCTGAAACTTCTATCAAAGAAGATTATCATCATTGAGTTTCACAATTGCGATTTTGGTACTCGGACTGAACATTAGAGTAACGGGAGAGGTCTCCTCGATTCCATCAATTTCCATAGTTGTTGATGAAGAGCTCATCACAACAAGCTCTCAAACAAAAGTAATCAGGGCCCTCTGGGTTAGACATGAGCTCTAATACCATCTATAAATTGCACTAAGAACATTGATAAAGAGCCCTAATCAAATGCAAGAGATATCCTTGCTTCTTTTTTATATATTTTTTTGGGAAGATGAACAGGCCATATATATAATAATAGAAAAGAAGCTTGGGCCTTGGGCTTTTTTTACATGAGAAATAATATGTACTTCAATGGTCTGTCTTAATATATTGTATTCTATTGATATTTCAATATATGTGATGTTGCTTTTGTTTTGTATTTTAATGTTTGTATTGTATTTTGTACAGTTGTCATTATTTTGACATTCAATGCTTTTTAGTTGATTACAATTAGTATCTGCATCGTCAACGTATCTCTATCTTAATTTTTTAGAAATTGAAGTTTCGCTATATCCTATCGTATCTCATATTCTTATGTGTATGTGCTTCATAGGAAATACGTCAAATTAATTTTTTACGCATGTAAATGCATCAACCCGTTTACTTTGAATTTCTACTATAAAAATAATATATATTTTTAAAATGTATATTTTAATAAATGTGTTGTTGTGTTTATTCCCTAGATTTTTAAAAAAATGATGTGTCTTAATGTCTTATCAGTGTCTAGTATCTTTATCTGCGTTTCTTAGGTGTTTTCTCACAGTTCTTTGTGTGATGTACTCATGACGTGTGTGCTGTTGAGAATGTTCTTTTTGGAAAGAAAGCACCATGTATTTTCTGATTCTTCACATCTGAAGATGTACATTTTGATGGTTCGCATATTCCATTTCTTATTCTAAATGAGCCATCATGATATATATTAATCCATAGATTCAATAAGTTTGAGGATTGAAACTGCAGCTTTCAACTTTTGTCTCTCCAAGTTTTTCTTTGTTCTTTTCTTCTTCTAATTAGGTTGTAACTTGTAATCAACTAATATTGAACGAAATGTTTCAGATTGAGATGCTGTTAGATGACCTAAAATGGGATGACAAAGGTCTGGTAGTAGCTACAGCTCAAAATGTTGACACAGGAACTATATTAATGCAAGGATTTGCAAATAAGGAGGCTATTGTTAGAACTGCTACCCAACGTAAGGCTACATTCTATAGTCGATCACGATCTCAACTGTGGACAAAGGGAGAGACCTCTAATAACTTCATCAACATTCACGACATATTTTTTGACTGTGATCGTGATTCTGTATGGCTCTAACTGACTATGACCTAAAACACAAGTTTATTGTGCTTTACTGTGCATGGCTAACTCAGTTTTAAAACTGATTGTTAGATCATTTATCTTGGAAAGCCTGATGGGCCTGCTTGTCATACTGGAAGTGACACATGCTTCTATACATCACTAGATGATTTGATAGATGATCCAAAGGTCTACTGCATCAACTTATTTGTTCTTGCTTAATAATGAGGAGAATAAGTTTGCTGACTTATCTGTATGATAATTCTTGTAGAATGTAAAGCATAGGTTGGCCTCTTCCACTTTGTACTCGTTAGAGAATACAATTTCCCAACGCAAAGCAGAATTAGCAGCTCCACAAACTGGCAAGCCCTCGTGGACGAAACGTCTATTGCTCGACAACAAGTTGCTCTGTTCTAAAATTCGGTATAGTGTTTAAAGTCAACCTTCGCTTTCTGCTCCATGTAGATGTAGTTCCAGTTTTTGACATGGTCAGTGTTTGTTCCAATAATATTGACAGGGAGGAAGCCGATGAGTTATGTCGAACCTCGGAAGAGGGCGAGGATAAGTCTCGCACGGCCTCAGAAATGGCAGATCTGGTGTATCATGCCATGGTTTTCCTAGCAGTTCAAGGGGTAAAGTTGGAGGATGTTTTTGAACACTTGCGCGAGAGATTTGCTCAGTCTGGTATCGAGGAGAAGAAAAATCGGGCCCGGAAAGTTGATCAATCAGCCATTACCAAGGATTAAAAATCGTCCTCATGTCGATATATCGTATATAGAAGAGTTTGAACATCGAGATCAAATATCCATGGGTATCTTCTTTATCTTTTATGAATACTCATGAAACATAAGAATAAGTCATCTATTTAGTCTAATATGAATAAAAATACTAATAACAATATTTATAATTTAGTTGGAGTAAAGATGACCTAATTGTTCTAAATATTTTTTATAATTTTTTTGGCTTATAGAAATAACCATCGATATTGATATTTTTTTTTTAGATATATCTGTTATATTCATAAAATTGAAATCTGAAATCTATATTGACATCAATATTTTAATCCTTGGCTATTATTAGTTTGCGAGGATTAAAATATCAATATCAATATTGATACTATGATTTTAATTTTATGGATATATCAATTGATATATCCATAAAATATCGATATTGATGTATATTTTTATAAATTAAAGAATTTATAAAAATTATTTTTAGACTAAAAGGATGACTTTTATTTTTAATGTTTTACGAACATTTTATAAAAGATATTGACGATATAAATAGATATTTAGTATTGTTGTCGAGCCTTTAATTTACATATAAATTGACACGTTGATCAGTTAGATCATCGCGGTCTTTGATTATATAGTAATGTAGTATGATGAACAGGATTACAAGGAAAGCTCTAATAAGAGTTTGTCATAATTTTTGTTTGTTTGTTTTATTATGCAGTAGCTGTTATTGTTGCACGAAATAAGGTTTGTTTTCTTTTTTGCTTTGTTTATGTACAAAATTTTGGGATGGAGATTCTCAAAGCTTATGGAATTTGAGATATATTTACATTGGCCAATGGGAATTTAGTATGCTTATTCAAATAGAATCTTGATTTATATTTTGGCAATTGAGCTTTCATTCATACCTACTCCATTCTATTTTTCGTAATTTCTGTACAAGACAAATTTGAAGTCGCAACTAGTGGGGTTAGATGTTGAGTTTTGAAATGAATTTGGGTTATCATTTCTTTATGATGAATAAGTTATAGGGACAGTGTGTATATATATAATGATTTGAGTGTAAGATAGAAGGGTTGAAATAAAGTAATTGAGAGTTGAGGGTTGAAAATGATATAATGAAAAGTCAAAAGTGTTTTTTTTGGTTAATCATGCAATTGAACTTTGTATTTCATATTTAGAAAATTTGTATGGATGGCCCTTATGAAAATTAGCTTAGTCCAAGAAGAAGGTTGATCAAACGTATTCATAGGAGAATTTCTTATCTTATCCTCTACTTTAGTTTTATTGTATGGTAAAGCCCATATTAGGACATGTCTACCTTGACTAA

mRNA sequence

TTTTGGTGAGCATGGTTGAAGCAATTGTAACTCAAAGCCCACATTTTTTTTTAAAAGCCCAGCCCAACTGGGAGAAACAATAAAACCTAAGTTAGGGCATCTCCTTCCACACTCAACGCTCCACTGCAGCACAGTACTTCCACCTCCACGCCTCCACGGCAAGGCAGCAACAAAGGATTGATCGTGAGGTTTTCTTATACCGCAATGTCGTATTTTGGATTCCAGTCTTTGACATTTTCGGGACCCCTTTTTGTATTCAACAATGTCTGTTTCAAGAAGTATAGATATAATCCTGCTTTTGTTTCAACAAGCAAATCGGACCTCTCACTTCAATCAAAGAAGAAGAAAGATTGGAAAGGAAGAAAAAGAATCAGAGTTGATGAGACAAAAAGGAATAAGAAAAGAGTGAAAAAGAAATTGAAGAAACTGCGTGTTGTAACTTGTAATCAACTAATATTGAACGAAATGTTTCAGATTGAGATGCTGTTAGATGACCTAAAATGGGATGACAAAGGTCTGGTAGTAGCTACAGCTCAAAATGTTGACACAGGAACTATATTAATGCAAGGATTTGCAAATAAGGAGGCTATTGTTAGAACTGCTACCCAACGTAAGGCTACATTCTATAGTCGATCACGATCTCAACTGTGGACAAAGGGAGAGACCTCTAATAACTTCATCAACATTCACGACATATTTTTTGACTGTGATCGTGATTCTATCATTTATCTTGGAAAGCCTGATGGGCCTGCTTGTCATACTGGAAGTGACACATGCTTCTATACATCACTAGATGATTTGATAGATGATCCAAAGAATGTAAAGCATAGGTTGGCCTCTTCCACTTTGTACTCGTTAGAGAATACAATTTCCCAACGCAAAGCAGAATTAGCAGCTCCACAAACTGGCAAGCCCTCGTGGACGAAACGTCTATTGCTCGACAACAAGTTGCTCTGTTCTAAAATTCGGGAGGAAGCCGATGAGTTATGTCGAACCTCGGAAGAGGGCGAGGATAAGTCTCGCACGGCCTCAGAAATGGCAGATCTGGTGTATCATGCCATGGTTTTCCTAGCAGTTCAAGGGGTAAAGTTGGAGGATGTTTTTGAACACTTGCGCGAGAGATTTGCTCAGTCTGTAGCTGTTATTGTTGCACGAAATAAGTTTTATTGTATGGTAAAGCCCATATTAGGACATGTCTACCTTGACTAA

Coding sequence (CDS)

ATGTCGTATTTTGGATTCCAGTCTTTGACATTTTCGGGACCCCTTTTTGTATTCAACAATGTCTGTTTCAAGAAGTATAGATATAATCCTGCTTTTGTTTCAACAAGCAAATCGGACCTCTCACTTCAATCAAAGAAGAAGAAAGATTGGAAAGGAAGAAAAAGAATCAGAGTTGATGAGACAAAAAGGAATAAGAAAAGAGTGAAAAAGAAATTGAAGAAACTGCGTGTTGTAACTTGTAATCAACTAATATTGAACGAAATGTTTCAGATTGAGATGCTGTTAGATGACCTAAAATGGGATGACAAAGGTCTGGTAGTAGCTACAGCTCAAAATGTTGACACAGGAACTATATTAATGCAAGGATTTGCAAATAAGGAGGCTATTGTTAGAACTGCTACCCAACGTAAGGCTACATTCTATAGTCGATCACGATCTCAACTGTGGACAAAGGGAGAGACCTCTAATAACTTCATCAACATTCACGACATATTTTTTGACTGTGATCGTGATTCTATCATTTATCTTGGAAAGCCTGATGGGCCTGCTTGTCATACTGGAAGTGACACATGCTTCTATACATCACTAGATGATTTGATAGATGATCCAAAGAATGTAAAGCATAGGTTGGCCTCTTCCACTTTGTACTCGTTAGAGAATACAATTTCCCAACGCAAAGCAGAATTAGCAGCTCCACAAACTGGCAAGCCCTCGTGGACGAAACGTCTATTGCTCGACAACAAGTTGCTCTGTTCTAAAATTCGGGAGGAAGCCGATGAGTTATGTCGAACCTCGGAAGAGGGCGAGGATAAGTCTCGCACGGCCTCAGAAATGGCAGATCTGGTGTATCATGCCATGGTTTTCCTAGCAGTTCAAGGGGTAAAGTTGGAGGATGTTTTTGAACACTTGCGCGAGAGATTTGCTCAGTCTGTAGCTGTTATTGTTGCACGAAATAAGTTTTATTGTATGGTAAAGCCCATATTAGGACATGTCTACCTTGACTAA

Protein sequence

MSYFGFQSLTFSGPLFVFNNVCFKKYRYNPAFVSTSKSDLSLQSKKKKDWKGRKRIRVDETKRNKKRVKKKLKKLRVVTCNQLILNEMFQIEMLLDDLKWDDKGLVVATAQNVDTGTILMQGFANKEAIVRTATQRKATFYSRSRSQLWTKGETSNNFINIHDIFFDCDRDSIIYLGKPDGPACHTGSDTCFYTSLDDLIDDPKNVKHRLASSTLYSLENTISQRKAELAAPQTGKPSWTKRLLLDNKLLCSKIREEADELCRTSEEGEDKSRTASEMADLVYHAMVFLAVQGVKLEDVFEHLRERFAQSVAVIVARNKFYCMVKPILGHVYLD
Homology
[Close]
BLAST of Clc01G08280 vs. NCBI nr
Match: XP_038876033.1 (histidine biosynthesis bifunctional protein hisIE, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 402.5 bits (1033), Expect = 3.5e-108
Identity = 213/308 (69.16%), Postives = 232/308 (75.32%), Query Frame = 0 

Query: 5   GFQSLTFSGPLFVFNNVCFKKYRYNPAFVSTSKS--DLSLQSKKKKDWKGRKRIRVDETK 64
           G +S+TFS P F  NN    KYR NP FVST++S  DLS +SK                 
Sbjct: 5   GCKSMTFSRPFFALNNFSSDKYRNNPVFVSTNESMKDLSFESK----------------- 64

Query: 65  RNKKRVKKKLKKLRVVTCNQLILNEMFQIEMLLDDLKWDDKGLVVATAQNVDTGTILMQG 124
                                       +EMLLDDLKWDDKGLVVATAQNVDTG ILMQG
Sbjct: 65  ----------------------------VEMLLDDLKWDDKGLVVATAQNVDTGAILMQG 124

Query: 125 FANKEAIVRTATQRKATFYSRSRSQLWTKGETSNNFINIHDIFFDCDRDSIIYLGKPDGP 184
           FANKEA+VRTATQRKATFYSRSRSQLWTKGETSNNFINIHDIF DCDRDSIIYLGKPDGP
Sbjct: 125 FANKEAVVRTATQRKATFYSRSRSQLWTKGETSNNFINIHDIFLDCDRDSIIYLGKPDGP 184

Query: 185 ACHTGSDTCFYTSLDDLIDDPKNVKHRLASSTLYSLENTISQRKAELAAPQTGKPSWTKR 244
           ACHTG++TCFYTSL DLIDDP+NVKHRLA  +LY LE+TISQRKAELAA QTGKPSWTKR
Sbjct: 185 ACHTGAETCFYTSLYDLIDDPQNVKHRLALPSLYILEHTISQRKAELAAQQTGKPSWTKR 244

Query: 245 LLLDNKLLCSKIREEADELCRTSEEGEDKSRTASEMADLVYHAMVFLAVQGVKLEDVFEH 304
           LLLD++LLCSKIREE+DE+CRT EEGEDK RTASEMADL YH MV LA Q V +EDVF+ 
Sbjct: 245 LLLDHRLLCSKIREESDEVCRTMEEGEDKYRTASEMADLWYHGMVLLAAQEVNVEDVFQL 267

Query: 305 LRERFAQS 311
           LRER +QS
Sbjct: 305 LRERLSQS 267

[Close]
BLAST of Clc01G08280 vs. NCBI nr
Match: XP_008465390.1 (PREDICTED: histidine biosynthesis bifunctional protein hisIE, chloroplastic [Cucumis melo])

HSP 1 Score: 388.7 bits (997), Expect = 5.2e-104
Identity = 207/308 (67.21%), Postives = 232/308 (75.32%), Query Frame = 0 

Query: 5   GFQSLTFSGPLFVFNNVCFKKYRYNPAFVSTSKS--DLSLQSKKKKDWKGRKRIRVDETK 64
           G QSLTFS  ++V++N   +K+R+NP F ST+KS  DLSL +K                 
Sbjct: 5   GCQSLTFSIRVYVYSNFSSEKHRWNPVFASTNKSVVDLSLPAK----------------- 64

Query: 65  RNKKRVKKKLKKLRVVTCNQLILNEMFQIEMLLDDLKWDDKGLVVATAQNVDTGTILMQG 124
                                       +E LLD LKWDDKGLVVATAQNVDTGTILMQG
Sbjct: 65  ----------------------------VERLLDGLKWDDKGLVVATAQNVDTGTILMQG 124

Query: 125 FANKEAIVRTATQRKATFYSRSRSQLWTKGETSNNFINIHDIFFDCDRDSIIYLGKPDGP 184
           FANKEA+++TA++R+ATFYSRSRSQLWTKGETSNNFINIHDI  DCDRDSIIYLGKP GP
Sbjct: 125 FANKEAVLKTASERRATFYSRSRSQLWTKGETSNNFINIHDISLDCDRDSIIYLGKPVGP 184

Query: 185 ACHTGSDTCFYTSLDDLIDDPKNVKHRLASSTLYSLENTISQRKAELAAPQTGKPSWTKR 244
           ACHTG+ TCFYTSLDDLIDDP+  KH+LA STLYSLEN ISQRKAELA+ QTGKPSWTKR
Sbjct: 185 ACHTGTATCFYTSLDDLIDDPQGGKHKLALSTLYSLENIISQRKAELASFQTGKPSWTKR 244

Query: 245 LLLDNKLLCSKIREEADELCRTSEEGEDKSRTASEMADLVYHAMVFLAVQGVKLEDVFEH 304
           LLLDNKLLCSKIREEADELCRT EE E +SRTASE AD+VYH +V LAVQ VK E+V EH
Sbjct: 245 LLLDNKLLCSKIREEADELCRTMEENEGRSRTASEAADVVYHILVSLAVQEVKFEEVLEH 267

Query: 305 LRERFAQS 311
           LRERF+QS
Sbjct: 305 LRERFSQS 267

[Close]
BLAST of Clc01G08280 vs. NCBI nr
Match: XP_038876034.1 (histidine biosynthesis bifunctional protein hisIE, chloroplastic isoform X2 [Benincasa hispida] >XP_038876035.1 histidine biosynthesis bifunctional protein hisIE, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 384.0 bits (985), Expect = 1.3e-102
Identity = 189/223 (84.75%), Postives = 205/223 (91.93%), Query Frame = 0 

Query: 88  MFQIEMLLDDLKWDDKGLVVATAQNVDTGTILMQGFANKEAIVRTATQRKATFYSRSRSQ 147
           + ++EMLLDDLKWDDKGLVVATAQNVDTG ILMQGFANKEA+VRTATQRKATFYSRSRSQ
Sbjct: 38  LLKVEMLLDDLKWDDKGLVVATAQNVDTGAILMQGFANKEAVVRTATQRKATFYSRSRSQ 97

Query: 148 LWTKGETSNNFINIHDIFFDCDRDSIIYLGKPDGPACHTGSDTCFYTSLDDLIDDPKNVK 207
           LWTKGETSNNFINIHDIF DCDRDSIIYLGKPDGPACHTG++TCFYTSL DLIDDP+NVK
Sbjct: 98  LWTKGETSNNFINIHDIFLDCDRDSIIYLGKPDGPACHTGAETCFYTSLYDLIDDPQNVK 157

Query: 208 HRLASSTLYSLENTISQRKAELAAPQTGKPSWTKRLLLDNKLLCSKIREEADELCRTSEE 267
           HRLA  +LY LE+TISQRKAELAA QTGKPSWTKRLLLD++LLCSKIREE+DE+CRT EE
Sbjct: 158 HRLALPSLYILEHTISQRKAELAAQQTGKPSWTKRLLLDHRLLCSKIREESDEVCRTMEE 217

Query: 268 GEDKSRTASEMADLVYHAMVFLAVQGVKLEDVFEHLRERFAQS 311
           GEDK RTASEMADL YH MV LA Q V +EDVF+ LRER +QS
Sbjct: 218 GEDKYRTASEMADLWYHGMVLLAAQEVNVEDVFQLLRERLSQS 260

[Close]
BLAST of Clc01G08280 vs. NCBI nr
Match: XP_038876036.1 (histidine biosynthesis bifunctional protein hisIE, chloroplastic isoform X3 [Benincasa hispida])

HSP 1 Score: 383.6 bits (984), Expect = 1.7e-102
Identity = 189/221 (85.52%), Postives = 204/221 (92.31%), Query Frame = 0 

Query: 90  QIEMLLDDLKWDDKGLVVATAQNVDTGTILMQGFANKEAIVRTATQRKATFYSRSRSQLW 149
           ++EMLLDDLKWDDKGLVVATAQNVDTG ILMQGFANKEA+VRTATQRKATFYSRSRSQLW
Sbjct: 2   KVEMLLDDLKWDDKGLVVATAQNVDTGAILMQGFANKEAVVRTATQRKATFYSRSRSQLW 61

Query: 150 TKGETSNNFINIHDIFFDCDRDSIIYLGKPDGPACHTGSDTCFYTSLDDLIDDPKNVKHR 209
           TKGETSNNFINIHDIF DCDRDSIIYLGKPDGPACHTG++TCFYTSL DLIDDP+NVKHR
Sbjct: 62  TKGETSNNFINIHDIFLDCDRDSIIYLGKPDGPACHTGAETCFYTSLYDLIDDPQNVKHR 121

Query: 210 LASSTLYSLENTISQRKAELAAPQTGKPSWTKRLLLDNKLLCSKIREEADELCRTSEEGE 269
           LA  +LY LE+TISQRKAELAA QTGKPSWTKRLLLD++LLCSKIREE+DE+CRT EEGE
Sbjct: 122 LALPSLYILEHTISQRKAELAAQQTGKPSWTKRLLLDHRLLCSKIREESDEVCRTMEEGE 181

Query: 270 DKSRTASEMADLVYHAMVFLAVQGVKLEDVFEHLRERFAQS 311
           DK RTASEMADL YH MV LA Q V +EDVF+ LRER +QS
Sbjct: 182 DKYRTASEMADLWYHGMVLLAAQEVNVEDVFQLLRERLSQS 222

[Close]
BLAST of Clc01G08280 vs. NCBI nr
Match: XP_004143768.1 (histidine biosynthesis bifunctional protein hisIE, chloroplastic isoform X1 [Cucumis sativus] >KAE8648475.1 hypothetical protein Csa_007981 [Cucumis sativus])

HSP 1 Score: 383.3 bits (983), Expect = 2.2e-102
Identity = 205/308 (66.56%), Postives = 230/308 (74.68%), Query Frame = 0 

Query: 5   GFQSLTFSGPLFVFNNVCFKKYRYNPAFVSTSKS--DLSLQSKKKKDWKGRKRIRVDETK 64
           G QSLTFS  + ++NN   +K+R++P F ST+KS  DLSL +K                 
Sbjct: 5   GCQSLTFSTRVSIYNNFISEKHRWSPVFASTNKSVVDLSLPAK----------------- 64

Query: 65  RNKKRVKKKLKKLRVVTCNQLILNEMFQIEMLLDDLKWDDKGLVVATAQNVDTGTILMQG 124
                                       +E LLD LKWDDKGLVVATAQNVDTGTILMQG
Sbjct: 65  ----------------------------VESLLDGLKWDDKGLVVATAQNVDTGTILMQG 124

Query: 125 FANKEAIVRTATQRKATFYSRSRSQLWTKGETSNNFINIHDIFFDCDRDSIIYLGKPDGP 184
           FANKEA+++TA +R+ATFYSRSRSQLWTKGETSNNFINIHDI  DCDRDSIIYLGKP GP
Sbjct: 125 FANKEAVLKTALERRATFYSRSRSQLWTKGETSNNFINIHDISLDCDRDSIIYLGKPVGP 184

Query: 185 ACHTGSDTCFYTSLDDLIDDPKNVKHRLASSTLYSLENTISQRKAELAAPQTGKPSWTKR 244
           ACHTG+ TCFYTSLDDLIDDP+  K +LA STLYSLEN ISQRKAELA+ QTGKPSWTKR
Sbjct: 185 ACHTGTATCFYTSLDDLIDDPQAGKSKLALSTLYSLENIISQRKAELASLQTGKPSWTKR 244

Query: 245 LLLDNKLLCSKIREEADELCRTSEEGEDKSRTASEMADLVYHAMVFLAVQGVKLEDVFEH 304
           LLL+NKLLCSKIREEADELCRT EE EDKSRTASE AD+VYH +V LAV+ VK E+V EH
Sbjct: 245 LLLENKLLCSKIREEADELCRTMEENEDKSRTASEAADVVYHILVSLAVKEVKFEEVLEH 267

Query: 305 LRERFAQS 311
           LRERF+QS
Sbjct: 305 LRERFSQS 267

[Close]
BLAST of Clc01G08280 vs. ExPASy Swiss-Prot
Match: O82768 (Histidine biosynthesis bifunctional protein hisIE, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HISN2 PE=1 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 1.2e-82
Identity = 148/221 (66.97%), Postives = 182/221 (82.35%), Query Frame = 0 

Query: 90  QIEMLLDDLKWDDKGLVVATAQNVDTGTILMQGFANKEAIVRTATQRKATFYSRSRSQLW 149
           +++ LLD +KWDDKGL VA AQNVDTG +LMQGF N+EA+  T + RKATF+SRSRS LW
Sbjct: 51  KVDNLLDRIKWDDKGLAVAIAQNVDTGAVLMQGFVNREALSTTISSRKATFFSRSRSTLW 110

Query: 150 TKGETSNNFINIHDIFFDCDRDSIIYLGKPDGPACHTGSDTCFYTSLDDLIDDPKNVKHR 209
           TKGETSNNFINI D++ DCDRDSIIYLG PDGP CHTG +TC+YTS+ D +++ +   ++
Sbjct: 111 TKGETSNNFINILDVYVDCDRDSIIYLGTPDGPTCHTGEETCYYTSVFDQLNNDEASGNK 170

Query: 210 LASSTLYSLENTISQRKAELAAPQTGKPSWTKRLLLDNKLLCSKIREEADELCRTSEEGE 269
           LA +TLYSLE+ IS+RK E   PQ GKPSWT+RLL D+ LLCSKIREEADELCRT E+ E
Sbjct: 171 LALTTLYSLESIISKRKEESTVPQEGKPSWTRRLLTDDALLCSKIREEADELCRTLEDNE 230

Query: 270 DKSRTASEMADLVYHAMVFLAVQGVKLEDVFEHLRERFAQS 311
           + SRT SEMAD++YHAMV L+ +GVK+EDV E LR+RF+QS
Sbjct: 231 EVSRTPSEMADVLYHAMVLLSKRGVKMEDVLEVLRKRFSQS 271

[Close]
BLAST of Clc01G08280 vs. ExPASy Swiss-Prot
Match: P62349 (Histidine biosynthesis bifunctional protein HisIE OS=Photobacterium profundum (strain SS9) OX=298386 GN=hisI PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.5e-29
Identity = 80/215 (37.21%), Postives = 121/215 (56.28%), Query Frame = 0 

Query: 94  LLDDLKWDD-KGLVVATAQNVDTGTILMQGFANKEAIVRTATQRKATFYSRSRSQLWTKG 153
           L+  + W+   GLV A  Q+  +G +LM G+ NKEA+ +T   ++ TF+SR++ +LWTKG
Sbjct: 3   LVTTINWEKVDGLVPAVIQDNTSGQVLMLGYMNKEALNKTLETKQVTFWSRTKERLWTKG 62

Query: 154 ETSNNFINIHDIFFDCDRDSIIYLGKPDGPACHTGSDTCFYTSLDDLIDDPKNVKHRLAS 213
           ETS N + +  I  DCD+D+++    P GP CH G+ TCF        +D +  + + A 
Sbjct: 63  ETSGNVLELKSINLDCDQDTLLVKVNPVGPTCHLGTPTCF-------DNDAEGKQEQPAL 122

Query: 214 STLYSLENTISQRKAELAAPQTGKPSWTKRLLL-DNKLLCSKIREEADELCRTSEEGEDK 273
             L+ LE  ++ RK   A P++   S+T  L     K +  K+ EE  E+   +  G DK
Sbjct: 123 VFLHQLEQVLANRKG--ADPES---SYTASLYARGTKRISQKVGEEGVEVALAATSG-DK 182

Query: 274 SRTASEMADLVYHAMVFLAVQGVKLEDVFEHLRER 307
           +    E ADL+YH +V L  QG+ L DV E L+ER
Sbjct: 183 AELVCESADLIYHLIVLLQDQGLSLSDVTEKLQER 204

[Close]
BLAST of Clc01G08280 vs. ExPASy Swiss-Prot
Match: Q8D8Q6 (Histidine biosynthesis bifunctional protein HisIE OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=hisI PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.2e-28
Identity = 76/219 (34.70%), Postives = 120/219 (54.79%), Query Frame = 0 

Query: 90  QIEMLLDDLKWDD-KGLVVATAQNVDTGTILMQGFANKEAIVRTATQRKATFYSRSRSQL 149
           ++  L + + W+   GLV A  Q+  +  +LM G+ N+EA+V+T    + TF+SR++ +L
Sbjct: 7   EVSSLAERINWEKVDGLVPAIVQDFQSSQVLMMGYMNQEALVKTGETGQVTFFSRTKERL 66

Query: 150 WTKGETSNNFINIHDIFFDCDRDSIIYLGKPDGPACHTGSDTCFYTSLDDLIDDPKNVKH 209
           WTKGETS N + + ++  DCD D+++    P GP CHTG+ TC+         DP+    
Sbjct: 67  WTKGETSGNVLQLVNMSLDCDNDTLLVKVNPIGPTCHTGTTTCW-------DGDPQEESQ 126

Query: 210 RLASSTLYSLENTISQRKAELAAPQTGKPSWTKRLLL-DNKLLCSKIREEADELCRTSEE 269
            +    L+ LE  ++ RK+  A P +   S+T  L     K +  K+ EE  E+   +  
Sbjct: 127 MV---WLHQLEQLLAARKS--AGPDS---SYTASLYARGTKRISQKVGEEGVEVALAATS 186

Query: 270 GEDKSRTASEMADLVYHAMVFLAVQGVKLEDVFEHLRER 307
           G DK+    E ADL+YH +V L  QG+ + DV   L+ER
Sbjct: 187 G-DKAELVCESADLIYHLLVLLQDQGLSMNDVINKLKER 209

[Close]
BLAST of Clc01G08280 vs. ExPASy Swiss-Prot
Match: P06989 (Histidine biosynthesis bifunctional protein HisIE OS=Escherichia coli (strain K12) OX=83333 GN=hisI PE=3 SV=3)

HSP 1 Score: 126.3 bits (316), Expect = 6.4e-28
Identity = 76/212 (35.85%), Postives = 116/212 (54.72%), Query Frame = 0 

Query: 97  DLKWD-DKGLVVATAQNVDTGTILMQGFANKEAIVRTATQRKATFYSRSRSQLWTKGETS 156
           +L W+   GL+    Q+  +G +LM G+ N EA+ +T    K TF+SR++ +LWTKGETS
Sbjct: 9   ELDWEKTDGLMPVIVQHAVSGEVLMLGYMNPEALDKTLESGKVTFFSRTKQRLWTKGETS 68

Query: 157 NNFINIHDIFFDCDRDSIIYLGKPDGPACHTGSDTCFYTSLDDLIDDPKNVKHRLASSTL 216
            NF+N+  I  DCD D+++ L  P GP CH G+ +CF  +    +              L
Sbjct: 69  GNFLNVVSIAPDCDNDTLLVLANPIGPTCHKGTSSCFGDTAHQWL-------------FL 128

Query: 217 YSLENTISQRKAELAAPQTGKPSWTKRLLLD-NKLLCSKIREEADELCRTSEEGEDKSRT 276
           Y LE  +++RK+  A P+T   S+T +L     K +  K+ EE  E    +    D+   
Sbjct: 129 YQLEQLLAERKS--ADPET---SYTAKLYASGTKRIAQKVGEEGVETALAATV-HDRFEL 188

Query: 277 ASEMADLVYHAMVFLAVQGVKLEDVFEHLRER 307
            +E +DL+YH +V L  QG+ L  V E+LR+R
Sbjct: 189 TNEASDLMYHLLVLLQDQGLDLTTVIENLRKR 201

[Close]
BLAST of Clc01G08280 vs. ExPASy Swiss-Prot
Match: Q8R886 (Histidine biosynthesis bifunctional protein HisIE OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=hisI PE=3 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.1e-27
Identity = 76/215 (35.35%), Postives = 118/215 (54.88%), Query Frame = 0 

Query: 95  LDDLKWDDKGLVVATAQNVDTGTILMQGFANKEAIVRTATQRKATFYSRSRSQLWTKGET 154
           + +LK+D+KGL+ A  Q+  T  +LM  + N+E++  T  + +  F+SRSR ++W KGET
Sbjct: 4   IKELKFDEKGLIPAIVQDYYTKQVLMLAYMNEESLKLTLEKGETYFFSRSRGKIWHKGET 63

Query: 155 SNNFINIHDIFFDCDRDSIIYLGKPDGPACHTGSDTCFYTSLDDLIDDPKNVKHRLASST 214
           S N   +  IF+DCD D+++   +  GPACHTG+ +CFY S D+  +D   +        
Sbjct: 64  SGNTQKVKKIFYDCDEDALLIQVEAKGPACHTGNISCFYRSFDEETEDGIEI-------- 123

Query: 215 LYSLENTISQRKAELAAPQTGKPSWTKRLLLD--NKLLCSKIREEADELCRTSEEGEDKS 274
           L  L   I  RK     P  G  S+T  L     +K+L  K+ EEA E+   S + + K 
Sbjct: 124 LNKLYERIKGRKIN---PVEG--SYTNYLFEKGIDKIL-KKVGEEATEVVIAS-KNDSKD 183

Query: 275 RTASEMADLVYHAMVFLAVQGVKLEDVFEHLRERF 308
               E++DL+YH MV L  + + L D++  L  R+
Sbjct: 184 EIVYEVSDLIYHLMVLLVEKNITLNDIYNELERRY 203

[Close]
BLAST of Clc01G08280 vs. ExPASy TrEMBL
Match: A0A1S3CQ97 (Phosphoribosyl-AMP cyclohydrolase OS=Cucumis melo OX=3656 GN=LOC103503018 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 2.5e-104
Identity = 207/308 (67.21%), Postives = 232/308 (75.32%), Query Frame = 0 

Query: 5   GFQSLTFSGPLFVFNNVCFKKYRYNPAFVSTSKS--DLSLQSKKKKDWKGRKRIRVDETK 64
           G QSLTFS  ++V++N   +K+R+NP F ST+KS  DLSL +K                 
Sbjct: 5   GCQSLTFSIRVYVYSNFSSEKHRWNPVFASTNKSVVDLSLPAK----------------- 64

Query: 65  RNKKRVKKKLKKLRVVTCNQLILNEMFQIEMLLDDLKWDDKGLVVATAQNVDTGTILMQG 124
                                       +E LLD LKWDDKGLVVATAQNVDTGTILMQG
Sbjct: 65  ----------------------------VERLLDGLKWDDKGLVVATAQNVDTGTILMQG 124

Query: 125 FANKEAIVRTATQRKATFYSRSRSQLWTKGETSNNFINIHDIFFDCDRDSIIYLGKPDGP 184
           FANKEA+++TA++R+ATFYSRSRSQLWTKGETSNNFINIHDI  DCDRDSIIYLGKP GP
Sbjct: 125 FANKEAVLKTASERRATFYSRSRSQLWTKGETSNNFINIHDISLDCDRDSIIYLGKPVGP 184

Query: 185 ACHTGSDTCFYTSLDDLIDDPKNVKHRLASSTLYSLENTISQRKAELAAPQTGKPSWTKR 244
           ACHTG+ TCFYTSLDDLIDDP+  KH+LA STLYSLEN ISQRKAELA+ QTGKPSWTKR
Sbjct: 185 ACHTGTATCFYTSLDDLIDDPQGGKHKLALSTLYSLENIISQRKAELASFQTGKPSWTKR 244

Query: 245 LLLDNKLLCSKIREEADELCRTSEEGEDKSRTASEMADLVYHAMVFLAVQGVKLEDVFEH 304
           LLLDNKLLCSKIREEADELCRT EE E +SRTASE AD+VYH +V LAVQ VK E+V EH
Sbjct: 245 LLLDNKLLCSKIREEADELCRTMEENEGRSRTASEAADVVYHILVSLAVQEVKFEEVLEH 267

Query: 305 LRERFAQS 311
           LRERF+QS
Sbjct: 305 LRERFSQS 267

[Close]
BLAST of Clc01G08280 vs. ExPASy TrEMBL
Match: A0A6J1CKR4 (Phosphoribosyl-AMP cyclohydrolase OS=Momordica charantia OX=3673 GN=LOC111011879 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 1.3e-100
Identity = 200/313 (63.90%), Postives = 226/313 (72.20%), Query Frame = 0 

Query: 2   SYFGFQSLTFSGP--LFVFNNVCFKKYRYNPAFVSTSK--SDLSLQSKKKKDWKGRKRIR 61
           SYFG QSL FS    LFV  N   +K+R  PAF STS    DLSLQ K            
Sbjct: 4   SYFGCQSLRFSPAKRLFVSTNFSSRKFRCGPAFASTSDFGKDLSLQMK------------ 63

Query: 62  VDETKRNKKRVKKKLKKLRVVTCNQLILNEMFQIEMLLDDLKWDDKGLVVATAQNVDTGT 121
                                            +EMLLD +KWDDKGL VA AQNVDTG 
Sbjct: 64  ---------------------------------VEMLLDSMKWDDKGLAVAIAQNVDTGA 123

Query: 122 ILMQGFANKEAIVRTATQRKATFYSRSRSQLWTKGETSNNFINIHDIFFDCDRDSIIYLG 181
           ILMQGFAN+EA+  TA+QRKATFYSRSRSQLWTKGETSNNFINIHDIF DCDRDSIIYLG
Sbjct: 124 ILMQGFANREAVATTASQRKATFYSRSRSQLWTKGETSNNFINIHDIFIDCDRDSIIYLG 183

Query: 182 KPDGPACHTGSDTCFYTSLDDLIDDPKNVKHRLASSTLYSLENTISQRKAELAAPQTGKP 241
           KPDGP CHTG++TC+YTSLDDL++  + V H+LA STLYSLE+TIS+RK E+A PQ GKP
Sbjct: 184 KPDGPTCHTGAETCYYTSLDDLMESQQEVNHKLALSTLYSLESTISERKVEIAVPQNGKP 243

Query: 242 SWTKRLLLDNKLLCSKIREEADELCRTSEEGEDKSRTASEMADLVYHAMVFLAVQGVKLE 301
           SWT+RLLLDN LLCSKIREEADELCRT EE EDKSRTASEMAD++YHAMV LAV+ V++E
Sbjct: 244 SWTRRLLLDNNLLCSKIREEADELCRTLEENEDKSRTASEMADVLYHAMVLLAVKEVEME 271

Query: 302 DVFEHLRERFAQS 311
           DV + LR+RF+QS
Sbjct: 304 DVLQILRQRFSQS 271

[Close]
BLAST of Clc01G08280 vs. ExPASy TrEMBL
Match: A0A5A7VLA1 (Phosphoribosyl-AMP cyclohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G00900 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.9e-99
Identity = 184/221 (83.26%), Postives = 201/221 (90.95%), Query Frame = 0 

Query: 90  QIEMLLDDLKWDDKGLVVATAQNVDTGTILMQGFANKEAIVRTATQRKATFYSRSRSQLW 149
           ++E LLD LKWDDKGLVVATAQNVDTGTILMQGFANKEA+++TA++R+ATFYSRSRSQLW
Sbjct: 32  EVERLLDGLKWDDKGLVVATAQNVDTGTILMQGFANKEAVLKTASERRATFYSRSRSQLW 91

Query: 150 TKGETSNNFINIHDIFFDCDRDSIIYLGKPDGPACHTGSDTCFYTSLDDLIDDPKNVKHR 209
           TKGETSNNFINIHDI  DCDRDSIIYLGKP GPACHTG+ TCFYTSLDDLIDDP+  KH+
Sbjct: 92  TKGETSNNFINIHDISLDCDRDSIIYLGKPVGPACHTGTATCFYTSLDDLIDDPQGGKHK 151

Query: 210 LASSTLYSLENTISQRKAELAAPQTGKPSWTKRLLLDNKLLCSKIREEADELCRTSEEGE 269
           LA STLYSLEN ISQRKAELA+ QTGKPSWTKRLLLDNKLLCSKIREEADELCRT EE E
Sbjct: 152 LALSTLYSLENIISQRKAELASFQTGKPSWTKRLLLDNKLLCSKIREEADELCRTMEENE 211

Query: 270 DKSRTASEMADLVYHAMVFLAVQGVKLEDVFEHLRERFAQS 311
            +SRTASE AD+VYH +V LAVQ VK E+V EHLRERF+QS
Sbjct: 212 GRSRTASEAADVVYHILVSLAVQEVKFEEVLEHLRERFSQS 252

[Close]
BLAST of Clc01G08280 vs. ExPASy TrEMBL
Match: A0A6J1CIX5 (Phosphoribosyl-AMP cyclohydrolase OS=Momordica charantia OX=3673 GN=LOC111011879 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 1.5e-96
Identity = 176/230 (76.52%), Postives = 204/230 (88.70%), Query Frame = 0 

Query: 82  QLILNEMF-QIEMLLDDLKWDDKGLVVATAQNVDTGTILMQGFANKEAIVRTATQRKATF 141
           +L L++ F ++EMLLD +KWDDKGL VA AQNVDTG ILMQGFAN+EA+  TA+QRKATF
Sbjct: 3   RLDLDQNFLKVEMLLDSMKWDDKGLAVAIAQNVDTGAILMQGFANREAVATTASQRKATF 62

Query: 142 YSRSRSQLWTKGETSNNFINIHDIFFDCDRDSIIYLGKPDGPACHTGSDTCFYTSLDDLI 201
           YSRSRSQLWTKGETSNNFINIHDIF DCDRDSIIYLGKPDGP CHTG++TC+YTSLDDL+
Sbjct: 63  YSRSRSQLWTKGETSNNFINIHDIFIDCDRDSIIYLGKPDGPTCHTGAETCYYTSLDDLM 122

Query: 202 DDPKNVKHRLASSTLYSLENTISQRKAELAAPQTGKPSWTKRLLLDNKLLCSKIREEADE 261
           +  + V H+LA STLYSLE+TIS+RK E+A PQ GKPSWT+RLLLDN LLCSKIREEADE
Sbjct: 123 ESQQEVNHKLALSTLYSLESTISERKVEIAVPQNGKPSWTRRLLLDNNLLCSKIREEADE 182

Query: 262 LCRTSEEGEDKSRTASEMADLVYHAMVFLAVQGVKLEDVFEHLRERFAQS 311
           LCRT EE EDKSRTASEMAD++YHAMV LAV+ V++EDV + LR+RF+QS
Sbjct: 183 LCRTLEENEDKSRTASEMADVLYHAMVLLAVKEVEMEDVLQILRQRFSQS 232

[Close]
BLAST of Clc01G08280 vs. ExPASy TrEMBL
Match: A0A6J1HJP3 (Phosphoribosyl-AMP cyclohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111464194 PE=3 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 7.4e-96
Identity = 198/313 (63.26%), Postives = 221/313 (70.61%), Query Frame = 0 

Query: 2   SYFGFQSLTFS--GPLFVFNNVCFKKYRYNPAFVSTSKS--DLSLQSKKKKDWKGRKRIR 61
           S FG QSL FS  G LF   N   KKYR N  F S S+S  DLSLQ K            
Sbjct: 4   STFGCQSLRFSPRGHLFASKNSVSKKYRCNATFASMSESGKDLSLQMK------------ 63

Query: 62  VDETKRNKKRVKKKLKKLRVVTCNQLILNEMFQIEMLLDDLKWDDKGLVVATAQNVDTGT 121
                                            +E LLD +KWDDKGL VA AQNVDTG 
Sbjct: 64  ---------------------------------VETLLDSIKWDDKGLAVAIAQNVDTGA 123

Query: 122 ILMQGFANKEAIVRTATQRKATFYSRSRSQLWTKGETSNNFINIHDIFFDCDRDSIIYLG 181
           ILMQGF NKEAI  T +QRKATFYSRSRSQLWTKGETSNNFINIHDIF DCDRDSIIYLG
Sbjct: 124 ILMQGFVNKEAIATTVSQRKATFYSRSRSQLWTKGETSNNFINIHDIFLDCDRDSIIYLG 183

Query: 182 KPDGPACHTGSDTCFYTSLDDLIDDPKNVKHRLASSTLYSLENTISQRKAELAAPQTGKP 241
           KP GP CHTG++TC+YTSLDD I+  ++ K +LA STLY+LE+TIS+RKAE+ APQ GKP
Sbjct: 184 KPVGPTCHTGAETCYYTSLDDSINQ-QDAKDKLALSTLYTLESTISERKAEIEAPQNGKP 243

Query: 242 SWTKRLLLDNKLLCSKIREEADELCRTSEEGEDKSRTASEMADLVYHAMVFLAVQGVKLE 301
           SWTKRLLLDN LLCSKIREEADELCRT EE EDKSR ASEMAD++YHAMV LAV+GV++E
Sbjct: 244 SWTKRLLLDNNLLCSKIREEADELCRTLEENEDKSRAASEMADVLYHAMVLLAVKGVEME 270

Query: 302 DVFEHLRERFAQS 311
           DV + LR+RF+QS
Sbjct: 304 DVLQILRQRFSQS 270

[Close]
BLAST of Clc01G08280 vs. TAIR 10
Match: AT1G31860.1 (histidine biosynthesis bifunctional protein (HISIE) )

HSP 1 Score: 308.1 bits (788), Expect = 8.4e-84
Identity = 148/221 (66.97%), Postives = 182/221 (82.35%), Query Frame = 0 

Query: 90  QIEMLLDDLKWDDKGLVVATAQNVDTGTILMQGFANKEAIVRTATQRKATFYSRSRSQLW 149
           +++ LLD +KWDDKGL VA AQNVDTG +LMQGF N+EA+  T + RKATF+SRSRS LW
Sbjct: 51  KVDNLLDRIKWDDKGLAVAIAQNVDTGAVLMQGFVNREALSTTISSRKATFFSRSRSTLW 110

Query: 150 TKGETSNNFINIHDIFFDCDRDSIIYLGKPDGPACHTGSDTCFYTSLDDLIDDPKNVKHR 209
           TKGETSNNFINI D++ DCDRDSIIYLG PDGP CHTG +TC+YTS+ D +++ +   ++
Sbjct: 111 TKGETSNNFINILDVYVDCDRDSIIYLGTPDGPTCHTGEETCYYTSVFDQLNNDEASGNK 170

Query: 210 LASSTLYSLENTISQRKAELAAPQTGKPSWTKRLLLDNKLLCSKIREEADELCRTSEEGE 269
           LA +TLYSLE+ IS+RK E   PQ GKPSWT+RLL D+ LLCSKIREEADELCRT E+ E
Sbjct: 171 LALTTLYSLESIISKRKEESTVPQEGKPSWTRRLLTDDALLCSKIREEADELCRTLEDNE 230

Query: 270 DKSRTASEMADLVYHAMVFLAVQGVKLEDVFEHLRERFAQS 311
           + SRT SEMAD++YHAMV L+ +GVK+EDV E LR+RF+QS
Sbjct: 231 EVSRTPSEMADVLYHAMVLLSKRGVKMEDVLEVLRKRFSQS 271

The following BLAST results are available for this feature:
BLAST of Clc01G08280 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038876033.13.5e-10869.16histidine biosynthesis bifunctional protein hisIE, chloroplastic isoform X1 [Ben... [more]
XP_008465390.15.2e-10467.21PREDICTED: histidine biosynthesis bifunctional protein hisIE, chloroplastic [Cuc... [more]
XP_038876034.11.3e-10284.75histidine biosynthesis bifunctional protein hisIE, chloroplastic isoform X2 [Ben... [more]
XP_038876036.11.7e-10285.52histidine biosynthesis bifunctional protein hisIE, chloroplastic isoform X3 [Ben... [more]
XP_004143768.12.2e-10266.56histidine biosynthesis bifunctional protein hisIE, chloroplastic isoform X1 [Cuc... [more]
BLAST of Clc01G08280 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O827681.2e-8266.97Histidine biosynthesis bifunctional protein hisIE, chloroplastic OS=Arabidopsis ... [more]
P623491.5e-2937.21Histidine biosynthesis bifunctional protein HisIE OS=Photobacterium profundum (s... [more]
Q8D8Q62.2e-2834.70Histidine biosynthesis bifunctional protein HisIE OS=Vibrio vulnificus (strain C... [more]
P069896.4e-2835.85Histidine biosynthesis bifunctional protein HisIE OS=Escherichia coli (strain K1... [more]
Q8R8861.1e-2735.35Histidine biosynthesis bifunctional protein HisIE OS=Caldanaerobacter subterrane... [more]
BLAST of Clc01G08280 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CQ972.5e-10467.21Phosphoribosyl-AMP cyclohydrolase OS=Cucumis melo OX=3656 GN=LOC103503018 PE=4 S... [more]
A0A6J1CKR41.3e-10063.90Phosphoribosyl-AMP cyclohydrolase OS=Momordica charantia OX=3673 GN=LOC111011879... [more]
A0A5A7VLA11.9e-9983.26Phosphoribosyl-AMP cyclohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A6J1CIX51.5e-9676.52Phosphoribosyl-AMP cyclohydrolase OS=Momordica charantia OX=3673 GN=LOC111011879... [more]
A0A6J1HJP37.4e-9663.26Phosphoribosyl-AMP cyclohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111464194 ... [more]
BLAST of Clc01G08280 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G31860.18.4e-8466.97histidine biosynthesis bifunctional protein (HISIE) [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 58..78
NoneNo IPR availableGENE3D1.10.287.1080coord: 210..308
e-value: 4.1E-23
score: 83.5
NoneNo IPR availablePANTHERPTHR42945:SF7BNAC05G24080D PROTEINcoord: 90..310
NoneNo IPR availablePANTHERPTHR42945HISTIDINE BIOSYNTHESIS BIFUNCTIONAL PROTEINcoord: 90..310
NoneNo IPR availableSUPERFAMILY101386all-alpha NTP pyrophosphatasescoord: 214..307
IPR038019Phosphoribosyl-AMP cyclohydrolase domain superfamilyGENE3D3.10.20.810coord: 86..184
e-value: 1.4E-32
score: 113.3
IPR038019Phosphoribosyl-AMP cyclohydrolase domain superfamilySUPERFAMILY141734HisI-likecoord: 93..197
IPR021130Phosphoribosyl-ATP pyrophosphohydrolase-likePFAMPF01503PRA-PHcoord: 218..306
e-value: 3.2E-13
score: 49.9
IPR008179Phosphoribosyl-ATP pyrophosphohydrolaseTIGRFAMTIGR03188TIGR03188coord: 215..303
e-value: 1.8E-20
score: 70.9
IPR008179Phosphoribosyl-ATP pyrophosphohydrolaseCDDcd11534NTP-PPase_HisIE_likecoord: 215..303
e-value: 6.17079E-24
score: 91.7511
IPR002496Phosphoribosyl-AMP cyclohydrolase domainPFAMPF01502PRA-CHcoord: 120..193
e-value: 1.5E-27
score: 95.2
IPR023019Histidine biosynthesis bifunctional protein HisIEHAMAPMF_01019HisIEcoord: 96..308
score: 30.08497

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc01G08280.2Clc01G08280.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000105 histidine biosynthetic process
molecular_function GO:0005524 ATP binding
molecular_function GO:0004635 phosphoribosyl-AMP cyclohydrolase activity
molecular_function GO:0004636 phosphoribosyl-ATP diphosphatase activity