Clc01G05630 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G05630
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	60S ribosomal protein L7a
Location	ClcChr01: 5241370 .. 5246676 (+)
RNA-Seq Expression	Clc01G05630
Synteny	Clc01G05630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCGTGCTTACAGCATCATTTGCGTTGTCATTCTCCATTTTTCGTTTCTCCATTCATCGCCGACATCAAAAGGTTGCAGAGTCTCGTTTGTTGGTGCTCGAATGTCAAGTGCAATGGAGTGATAGAGAAAAGCGTGAGAGGATATTAAGAGAGAGAAAGTGAAAGCATGACAACGAGAAAGAGATAAGAGATTGAGAGAGAGGAAACCAAAAGAAAGAGTGAGAGCGAGACAACAATAAATAGAGGGGAGATCGAAAGTGAGTGGAAATGAAAAAAGGAAAGAGAGGAAATCGAAAGAAAGGGGAGGTCGAGACAAAGAGAGATCGAAAGGTCAATCCACATGCGTGAGGTTCTATTTTGGTAATTTTACACGGATATGACATAAACAAAAAGTTTAAAAAACCTCAAATTTTGAAAAGTAGAGCATGTTTCATTTCCTCTTCCCCCAATTTTAGGCTATCCATTCACTAAACCCTTAAGATTTAGACATAAATGATTTGAAATTTTAGAATTTAAGAAAATAGAAATGATTTCACATTTCAATAAGCATTTGAAATCATTATAAGTTTATTATCATATATGCAAACAAATCCATATAATCAAGGCATTGATCAATCTCATTTAATCAAACTTAAATCCACTCACTAAATCTCAATCTAAATAAAATGTAAATGTAACACCTACGTATATATAACTTGCGATGAGATCAATAAGTTATGTGCTTGCTTCTGGTAGGGGTTGTATAAGGGCAAGCATAAGTTCCATTAAAAAAGTTGGAAGAAATTGTGGAAGTGTGCAGGCTTTCGTAATCTTAGCCTCTTCAATCAAGCCATGCTCACTATTCACTAAAGTTAGCTAGCTCCTCCTGAAGCATCCGAAAAGCCTCTTCGTTAGAGTTCTTTGCACTCGTTACATTAAAGACCATAATTTCTTAAGGGCCCAGATGGGCTCTAACCCCTCGTATACATGGAGGAGCATTATTTGGGCTAGATACCTATTCAAGAAGGGGTTTAGGTGGAAAGTAGACAACGGTCGTTGTATCAAAATCGATCATGACCCATGGATTAACAGAAAAGGAAGTTGCATGCCTACGTTCTACATTATGCCATGGTCATTTGGCAGGGAAGTTGGTTCATGGCCTTTTTTAGGCCTAATGTGGTTGGAATGGGGGGTTTATCTGGAGTAGGTCCCCTCCTTTGATGTCGAAGTCATCCTCAACACACATGTGGCGATCGAGATTATTTTTTGAATTGCGACCCAAAATGTTGTTTTCTCCATGAAAAGTGCCTACCACCTGGCTATGTCTATTCAGTCTTCCAAGATCATGTCTTTGTCTGTTGAGAATCCTGATAAGTCAATGTGAAATTTCCTCAAAAGGCTAATGCCCTTCCTAGGGCTAAACATTGTGCTTGGAGGATCTTTTATCACATCATTCCCTCTAACATCAATACATCTAATATGGGAGTGTCGGCTAGTCCCATGTGTTTGTTTTGCAGGAAAGAATAGGAGTTTGCGCCTCATGCCCTATGGTACTATAAGTTGGCCAAGAGTATTTGGATTGAGTTCATTCCTAAAATGCAAACTATTTTTCTATTGTATAGGCCCCCTTTGCATCTTATAGAGCTTTGGAGTTGGATAGTTTAAATCCTTGATGAAGAGGCAAGGTGATTACAGTTTTGTAGTGTCTATGGAACTATCAGAACTCTATCAAGATCAACAAGCGAAAGCTTCGTTGGAGATATCGTATAAAAATGTTGATTTAAAAAAAAAAAAAGGTTGATTTCCCCACAAGAACAATTAATGGGGACCAAGTTTCTCATAGAAAAAAAATTATTGTTTTTTCTTTTTGAATTTAATAGCAACCAAAGTAGGCTTTTTTATATTTTATAAGTTTAAATGGAGCATTTTCGATACAGTTTTCATTTAAAGAAAAAGTTGTAAAATTTTCAATTAAAAACAATAATATTTAATGTACAAAAATATAATTAAAATGTTGAGGCATACTCTAACCTTAGACTCTCTTAAGAATGAGAGTTAAAATAAACGCCAAAAAGGAATCTTTCGAAATCAAAGAAAGACTTGAAAAAGATGTCAAAGTTGCATATTATCCCCACTAGGGATTTTACAAAAATCACATACATTCAAGGAGGCAGCAAAGATAAGAGCCTCAATCACCATAAAACAGACTTTAGTAAAGTTCGAATAAAAACCATTAAGGAGGCTCACAACCTCAAGTGAAATTAGACTCCACAAAAATCATACAATTTTGATCCTTCCATATAACACCTCACAACTTTGAAACCTTCCATGATAGCTTTAACTTCCAGCGCTTTCAATTGTCACTTATGGCAAATAAAGCTACACCCACCAACGATAGGGTTCTCATTACAATTTTGTTAAAAGAAACACTTAAATGCCTATCAAATTATTCAAAAGAAAAAAAATTAGCACAATTCTTTTTAGTTTTTAAAATTTGACTTGATTTTCGAAAATTGAAGACAAGAATACAAACTAAATATCAAAACATATAAAATTATGCACTAAAATCGTACTTACATGCTTACTTTTTAGGATCGAATAATTATCAACGATTGTTTTGTTTTTGCCACTATTTTTTCAGAAAAGTGATGCTTAATTTATCACACTTTATTCTTAATAGTTAAATTATTTCTTAAGAAAACATTTTAATACCCAACCAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTACTTTGAAGTGCAATTGTTGTTAATTAAAAAGTCATTTTATTAAAAAGTAAGAAAAATCGTACTGAATTTAAAGTTATTGTTATTAAATTTATATTTTATTGAAAAAAGAAAGGCAAGTGCAAAAAAAAAAGGCCGGGAATTTATATTTAATTTCGTTTTCTTCTTCCTTCTAAACCCTAGCCCTCCCCCCGCCTTCCGATCACTCTCGTTTTTACTATTACCTCGCCCAAAATGGTACCTTCTTTTTCTCTCGTTTAAGATGTTTCAATTTATTGTTTGCATTCTTATGTATGTTCTTCTTGTACTCTTGAAAGGCACCGAAGAAGGCTGTTGGAAAAGTTTCGACAAAAAAGAAGCCGGTAAATCCGTTGTTTTTTCCCTTGATGCGAATTTGTTGTTTCAGTTCTCTATTGATGCGAATTTGGATTGTTTGCAGGAGAAGGTGGTGAATCCGATATTTGAGAAGCGTCCGAAGCAGTTTGGAATCGGTGGGGCATTGCCGCCTAAGAGGGACCTCACACGCTTTGTCAAATGGCCCAAAGTTGTTCAAATTCAGAGGAAGAAGAGGATTCTGAAGCAGAGGCTCAAGGTTCCACCAGCTTTGAATCAGTTCACCAAGACCCTTGACAAGAATCTTGGTAACTAAACCCAAAATTCTCCCGGAGATTCCTATTACATGATTAGTATTTAGTCAGAAGATTTTAAAATTAATTGCTAGGTTTTAGATGATCATTATTGAGTAGTTTAGTAAATTGCGTGTTGTGTCCCTCTTCAGTTTATGCCTTTTGTTTTTTCAACTGGAACTCTCTTCATTTGTTATGAAGTATGAACTTTGTTAGGTTATAGGAGCGATAGTTTGTATGATTGCACTTAATTTAGGAGAGGTGTAGAAGTTTCTGCTACGGTGAAAGAAGAAATAAGTAGTTCCGTACCTTATTGATTGATGCTTTGGTTTGGCTACCTTGAGATACCATGTTTTGATTCGCTTTGCAAGTTTTTTGGGGAGTTGGTAATAAACTTCAGTCTCTTGGAACCTAAATTCTTCTCTTAGCTTTTTTTTTCCTCTTCTCGTTGGGTTTCTTGGATTATGCTTAGATCTTCTCACATTTTGGGTTGTTTAGACCTTCTAATGATTCTATTCTTATAATTGGTTCTCTTTATATAAACATGATTTATTCTTTATAGTATATGGTCGTGAATGAAATGTGCCTTTTTTTATGGTAGTTTTCATTTTCCTTTTAATAATTTTCATTTTTGGTCATTTGGAAAAATGTATTGGTTTCTGACCATATTCCAATAAACTCTTCTGGTCATCTTCCATGTGATTTTGATCAGATTTAAGATATATTTTGGCTTTTGCTTATGTCATCATCTATGTGGTTCTTTGATATTTGTTGGAACGTCGTTAGACGGTTGGTTTTACAAGCCTTTTCATGCATTTGCAGCAACAAACTTGTTCAAGATGCTTTTGAAGTATAGGCCAGAGGATAAAACACAGAAAAGGGAGCGTCTTTTGAAAAGAGCTCAGGAAGAGGCTGAAGGCAAATCACACGATGCCAAAAAGCCTATTGTTGTTAAATATGGTCTCAATCATGTTACCTATCTCATTGAGCAGGTCATATTTTATTCCATACATGTGAAATATTCCACCCTTTTCAACTGCAATGTTATCTGCAATCAGATACATTCCTTTTATCTTTAACATCCATATATTATGTACTTTATTTTCAGAACAAGGCACAACTGGTTGTGATTGCACACGATGTGGATCCGATCGAGTTGGTTGTATGGCTCCCAGCTTTGTGCAGGAAGATGGAAATTCCATATTGCATTGTGAAGGGAAAAGCACGATTGGGAGCGGTAACTGTATCTTTATTTAACACAATATTGTTTACTCCTTCGAAACCATGGATCAATGTTTTTGTAAATTTTCCTTTTTAATAACAGATTGTCCACAAAAAGACTGCATCAGTTTTGTGTTTGACAACCGTGAAGAATGAAGATAAGTTGGAGTTTAGCAGGATCCTGGAAGCCATTAAGGTGCCTTATACACATATAAAGCCAAGACAACTACACTTTATTTTATGGTATCTGAATTAGGCTCATATTTAACAACTTGTTCGTTGTTTTGTTTGATGTTAGGCTAATTTCAACGACAAGTACGACGAGTACAGGAAGAAGTGGGGTGGTGGAATCATGGGATCCAAGTCCCAGGCTAAAACCAAGGCAAAGGAGAAATTACTCGCCAAAGAAGCTGCTCAAAGGATGTCTTAG

mRNA sequence

ATGTCTTCGTGCTTACAGCATCATTTGCGTTGTCATTCTCCATTTTTCGTTTCTCCATTCATCGCCGACATCAAAAGGTTGCAGAGTCTCGTTTGTTGGTGCTCGAATGTCAAGTGCAATGGAGTGATAGAGAAAAGCGAAAGAATAGGAGTTTGCGCCTCATGCCCTATGGCACCGAAGAAGGCTGTTGGAAAAGTTTCGACAAAAAAGAAGCCGTTCTCTATTGATGCGAATTTGGATTGTTTGCAGGAGAAGGTGGTGAATCCGATATTTGAGAAGCGTCCGAAGCAGTTTGGAATCGGTGGGGCATTGCCGCCTAAGAGGGACCTCACACGCTTTGTCAAATGGCCCAAAGTTGTTCAAATTCAGAGGAAGAAGAGGATTCTGAAGCAGAGGCTCAAGGTTCCACCAGCTTTGAATCAGTTCACCAAGACCCTTGACAAGAATCTTGCAACAAACTTGTTCAAGATGCTTTTGAAGTATAGGCCAGAGGATAAAACACAGAAAAGGGAGCGTCTTTTGAAAAGAGCTCAGGAAGAGGCTGAAGGCAAATCACACGATGCCAAAAAGCCTATTGTTGTTAAATATGGTCTCAATCATGTTACCTATCTCATTGAGCAGAACAAGGCACAACTGGTTGTGATTGCACACGATGTGGATCCGATCGAGTTGGTTGTATGGCTCCCAGCTTTGTGCAGGAAGATGGAAATTCCATATTGCATTGTGAAGGGAAAAGCACGATTGGGAGCGATTGTCCACAAAAAGACTGCATCAGTTTTGTGTTTGACAACCGTGAAGAATGAAGATAAGTTGGAGTTTAGCAGGATCCTGGAAGCCATTAAGGCTAATTTCAACGACAAGTACGACGAGTACAGGAAGAAGTGGGGTGGTGGAATCATGGGATCCAAGTCCCAGGCTAAAACCAAGGCAAAGGAGAAATTACTCGCCAAAGAAGCTGCTCAAAGGATGTCTTAG

Coding sequence (CDS)

ATGTCTTCGTGCTTACAGCATCATTTGCGTTGTCATTCTCCATTTTTCGTTTCTCCATTCATCGCCGACATCAAAAGGTTGCAGAGTCTCGTTTGTTGGTGCTCGAATGTCAAGTGCAATGGAGTGATAGAGAAAAGCGAAAGAATAGGAGTTTGCGCCTCATGCCCTATGGCACCGAAGAAGGCTGTTGGAAAAGTTTCGACAAAAAAGAAGCCGTTCTCTATTGATGCGAATTTGGATTGTTTGCAGGAGAAGGTGGTGAATCCGATATTTGAGAAGCGTCCGAAGCAGTTTGGAATCGGTGGGGCATTGCCGCCTAAGAGGGACCTCACACGCTTTGTCAAATGGCCCAAAGTTGTTCAAATTCAGAGGAAGAAGAGGATTCTGAAGCAGAGGCTCAAGGTTCCACCAGCTTTGAATCAGTTCACCAAGACCCTTGACAAGAATCTTGCAACAAACTTGTTCAAGATGCTTTTGAAGTATAGGCCAGAGGATAAAACACAGAAAAGGGAGCGTCTTTTGAAAAGAGCTCAGGAAGAGGCTGAAGGCAAATCACACGATGCCAAAAAGCCTATTGTTGTTAAATATGGTCTCAATCATGTTACCTATCTCATTGAGCAGAACAAGGCACAACTGGTTGTGATTGCACACGATGTGGATCCGATCGAGTTGGTTGTATGGCTCCCAGCTTTGTGCAGGAAGATGGAAATTCCATATTGCATTGTGAAGGGAAAAGCACGATTGGGAGCGATTGTCCACAAAAAGACTGCATCAGTTTTGTGTTTGACAACCGTGAAGAATGAAGATAAGTTGGAGTTTAGCAGGATCCTGGAAGCCATTAAGGCTAATTTCAACGACAAGTACGACGAGTACAGGAAGAAGTGGGGTGGTGGAATCATGGGATCCAAGTCCCAGGCTAAAACCAAGGCAAAGGAGAAATTACTCGCCAAAGAAGCTGCTCAAAGGATGTCTTAG

Protein sequence

MSSCLQHHLRCHSPFFVSPFIADIKRLQSLVCWCSNVKCNGVIEKSERIGVCASCPMAPKKAVGKVSTKKKPFSIDANLDCLQEKVVNPIFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKEKLLAKEAAQRMS

Homology

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BLAST of Clc01G05630 vs. NCBI nr
Match: XP_008467259.1 (PREDICTED: 60S ribosomal protein L7a-2 [Cucumis melo] >KAA0055141.1 60S ribosomal protein L7a-2 [Cucumis melo var. makuwa] >TYK20718.1 60S ribosomal protein L7a-2 [Cucumis melo var. makuwa])

HSP 1 Score: 485.0 bits (1247), Expect = 5.2e-133
Identity = 253/268 (94.40%), Postives = 256/268 (95.52%), Query Frame = 0


Query: 57  MAPKKAVGKVSTKKKPFSIDANLDCLQEKVVNPIFEKRPKQFGIGGALPPKRDLTRFVKW 116
           MAPKKAVGKVS KKKP           EKVVNP+FEKRPKQFGIGGALPPKRDLTRFVKW
Sbjct: 1   MAPKKAVGKVSAKKKP-----------EKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKW 60

Query: 117 PKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKRERLLKR 176
           PKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKRERLLKR
Sbjct: 61  PKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKRERLLKR 120

Query: 177 AQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME 236
           AQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME
Sbjct: 121 AQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME 180

Query: 237 IPYCIVKGKARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWG 296
           IPYCIVKGKARLGA+VHKKTASVLCLTTVKNEDK+EFSRILEAIKANFNDKYDEYRKKWG
Sbjct: 181 IPYCIVKGKARLGAVVHKKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWG 240

Query: 297 GGIMGSKSQAKTKAKEKLLAKEAAQRMS 325
           GGIMGSKSQAKTKAKEKLLAKEAAQRMS
Sbjct: 241 GGIMGSKSQAKTKAKEKLLAKEAAQRMS 257

[Close]

BLAST of Clc01G05630 vs. NCBI nr
Match: XP_038876466.1 (60S ribosomal protein L7a-2 isoform X2 [Benincasa hispida])

HSP 1 Score: 483.0 bits (1242), Expect = 2.0e-132
Identity = 253/268 (94.40%), Postives = 255/268 (95.15%), Query Frame = 0


Query: 57  MAPKKAVGKVSTKKKPFSIDANLDCLQEKVVNPIFEKRPKQFGIGGALPPKRDLTRFVKW 116
           MAPK+AVGKVS KKKP           EKVVNP+FEKRPKQFGIGGALPPKRDLTRFVKW
Sbjct: 1   MAPKRAVGKVSVKKKP-----------EKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKW 60

Query: 117 PKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKRERLLKR 176
           PKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDK QKRERLLKR
Sbjct: 61  PKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKR 120

Query: 177 AQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME 236
           AQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME
Sbjct: 121 AQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME 180

Query: 237 IPYCIVKGKARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWG 296
           IPYCIVKGKARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWG
Sbjct: 181 IPYCIVKGKARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWG 240

Query: 297 GGIMGSKSQAKTKAKEKLLAKEAAQRMS 325
           GGIMGSKSQAKTKAKEKLLAKEAAQRMS
Sbjct: 241 GGIMGSKSQAKTKAKEKLLAKEAAQRMS 257

[Close]

BLAST of Clc01G05630 vs. NCBI nr
Match: XP_004143647.1 (60S ribosomal protein L7a-1 [Cucumis sativus] >KGN50392.1 hypothetical protein Csa_000458 [Cucumis sativus])

HSP 1 Score: 479.2 bits (1232), Expect = 2.9e-131
Identity = 250/268 (93.28%), Postives = 255/268 (95.15%), Query Frame = 0


Query: 57  MAPKKAVGKVSTKKKPFSIDANLDCLQEKVVNPIFEKRPKQFGIGGALPPKRDLTRFVKW 116
           MAPKKAVGKVS KKK            EKVVNP+FEKRPKQFGIGGALPPKRDLTRFVKW
Sbjct: 1   MAPKKAVGKVSAKKK-----------TEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKW 60

Query: 117 PKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKRERLLKR 176
           PKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQK+ERLLKR
Sbjct: 61  PKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKKERLLKR 120

Query: 177 AQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME 236
           AQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME
Sbjct: 121 AQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME 180

Query: 237 IPYCIVKGKARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWG 296
           IPYCIVKGKARLGA+VH+KTASVLCLTTVKNEDK+EFSRILEAIKANFNDKYDEYRKKWG
Sbjct: 181 IPYCIVKGKARLGAVVHQKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWG 240

Query: 297 GGIMGSKSQAKTKAKEKLLAKEAAQRMS 325
           GGIMGSKSQAKTKAKEKLLAKEAAQRMS
Sbjct: 241 GGIMGSKSQAKTKAKEKLLAKEAAQRMS 257

[Close]

BLAST of Clc01G05630 vs. NCBI nr
Match: XP_022157908.1 (60S ribosomal protein L7a-2 [Momordica charantia])

HSP 1 Score: 478.8 bits (1231), Expect = 3.7e-131
Identity = 250/268 (93.28%), Postives = 253/268 (94.40%), Query Frame = 0


Query: 57  MAPKKAVGKVSTKKKPFSIDANLDCLQEKVVNPIFEKRPKQFGIGGALPPKRDLTRFVKW 116
           MAPKKAVGK S KKKP           EKVVNP+FEKRPKQFGIGGALPPKRDLTRFVKW
Sbjct: 1   MAPKKAVGKASAKKKP-----------EKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKW 60

Query: 117 PKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKRERLLKR 176
           PK VQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDK QK+ERLLKR
Sbjct: 61  PKAVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKKERLLKR 120

Query: 177 AQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME 236
           AQEEAEGK+HDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME
Sbjct: 121 AQEEAEGKAHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME 180

Query: 237 IPYCIVKGKARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWG 296
           IPYCIVKGKARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWG
Sbjct: 181 IPYCIVKGKARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWG 240

Query: 297 GGIMGSKSQAKTKAKEKLLAKEAAQRMS 325
           GGIMGSKSQAKTKAKEKLLAKEAAQRMS
Sbjct: 241 GGIMGSKSQAKTKAKEKLLAKEAAQRMS 257

[Close]

BLAST of Clc01G05630 vs. NCBI nr
Match: XP_038876464.1 (60S ribosomal protein L7a-2-like isoform X2 [Benincasa hispida])

HSP 1 Score: 478.8 bits (1231), Expect = 3.7e-131
Identity = 251/268 (93.66%), Postives = 254/268 (94.78%), Query Frame = 0


Query: 57  MAPKKAVGKVSTKKKPFSIDANLDCLQEKVVNPIFEKRPKQFGIGGALPPKRDLTRFVKW 116
           MAPKKAVGKV  KKK           QEKVVNP+FEKRPKQFGIGGALPPKRDLTRFVKW
Sbjct: 1   MAPKKAVGKVLAKKK-----------QEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKW 60

Query: 117 PKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKRERLLKR 176
           PKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLA NLFKMLLKYRPEDKTQKRERLLKR
Sbjct: 61  PKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLAMNLFKMLLKYRPEDKTQKRERLLKR 120

Query: 177 AQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME 236
           AQEEAEGK+HDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME
Sbjct: 121 AQEEAEGKTHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME 180

Query: 237 IPYCIVKGKARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWG 296
           IPYCIVKGKARLGAIVHKKTASVLCLTTVKNEDK+EFSRILEAIKANFNDKYDEYRKKWG
Sbjct: 181 IPYCIVKGKARLGAIVHKKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWG 240

Query: 297 GGIMGSKSQAKTKAKEKLLAKEAAQRMS 325
           GGIMGSKSQAKTKAKEKLLAKEAAQRMS
Sbjct: 241 GGIMGSKSQAKTKAKEKLLAKEAAQRMS 257

[Close]

BLAST of Clc01G05630 vs. ExPASy Swiss-Prot
Match: P35685 (60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-1 PE=2 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 4.5e-119
Identity = 225/269 (83.64%), Postives = 243/269 (90.33%), Query Frame = 0


Query: 57  MAPKK-AVGKVSTKKKPFSIDANLDCLQEKVVNPIFEKRPKQFGIGGALPPKRDLTRFVK 116
           MAPK+     V  KKK            EKV NP+FEKRPKQFGIGGALPPK+DL RFVK
Sbjct: 1   MAPKRGGRAPVPAKKK-----------TEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVK 60

Query: 117 WPKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKRERLLK 176
           WPKVV+IQR++RILKQRLKVPPALNQFT+TLDKNLATNLFKMLLKYRPEDK  K+ERLLK
Sbjct: 61  WPKVVRIQRQRRILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPEDKAAKKERLLK 120

Query: 177 RAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKM 236
           RAQ EAEGK+ +AKKPIVVKYGLNHVTYLIEQ+KAQLVVIAHDVDPIELVVWLPALCRKM
Sbjct: 121 RAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKM 180

Query: 237 EIPYCIVKGKARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKW 296
           E+PYCIVKGKARLG+IVHKKTASVLCLTTVKNEDKLEFS+ILEAIKANFNDK+DE RKKW
Sbjct: 181 EVPYCIVKGKARLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKW 240

Query: 297 GGGIMGSKSQAKTKAKEKLLAKEAAQRMS 325
           GGG+MGSKSQAKTKA+EKLLAKEAAQRM+
Sbjct: 241 GGGVMGSKSQAKTKAREKLLAKEAAQRMT 258

[Close]

BLAST of Clc01G05630 vs. ExPASy Swiss-Prot
Match: P0DKK7 (60S ribosomal protein L7a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-2 PE=2 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 4.5e-119
Identity = 225/269 (83.64%), Postives = 243/269 (90.33%), Query Frame = 0


Query: 57  MAPKK-AVGKVSTKKKPFSIDANLDCLQEKVVNPIFEKRPKQFGIGGALPPKRDLTRFVK 116
           MAPK+     V  KKK            EKV NP+FEKRPKQFGIGGALPPK+DL RFVK
Sbjct: 1   MAPKRGGRAPVPAKKK-----------TEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVK 60

Query: 117 WPKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKRERLLK 176
           WPKVV+IQR++RILKQRLKVPPALNQFT+TLDKNLATNLFKMLLKYRPEDK  K+ERLLK
Sbjct: 61  WPKVVRIQRQRRILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPEDKAAKKERLLK 120

Query: 177 RAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKM 236
           RAQ EAEGK+ +AKKPIVVKYGLNHVTYLIEQ+KAQLVVIAHDVDPIELVVWLPALCRKM
Sbjct: 121 RAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKM 180

Query: 237 EIPYCIVKGKARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKW 296
           E+PYCIVKGKARLG+IVHKKTASVLCLTTVKNEDKLEFS+ILEAIKANFNDK+DE RKKW
Sbjct: 181 EVPYCIVKGKARLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKW 240

Query: 297 GGGIMGSKSQAKTKAKEKLLAKEAAQRMS 325
           GGG+MGSKSQAKTKA+EKLLAKEAAQRM+
Sbjct: 241 GGGVMGSKSQAKTKAREKLLAKEAAQRMT 258

[Close]

BLAST of Clc01G05630 vs. ExPASy Swiss-Prot
Match: Q9LZH9 (60S ribosomal protein L7a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7AB PE=1 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 1.3e-118
Identity = 217/268 (80.97%), Postives = 246/268 (91.79%), Query Frame = 0


Query: 57  MAPKKAVGKVSTKKKPFSIDANLDCLQEKVVNPIFEKRPKQFGIGGALPPKRDLTRFVKW 116
           MAPKK V KV++KKKP           EKV NP+FE+RPKQFGIGGALPPK+DL+R++KW
Sbjct: 1   MAPKKGV-KVASKKKP-----------EKVTNPLFERRPKQFGIGGALPPKKDLSRYIKW 60

Query: 117 PKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKRERLLKR 176
           PK +++QR+KRILKQRLKVPPALNQFTKTLDKNLAT+LFK+LLKYRPEDK  K+ERLL +
Sbjct: 61  PKSIRLQRQKRILKQRLKVPPALNQFTKTLDKNLATSLFKILLKYRPEDKAAKKERLLNK 120

Query: 177 AQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME 236
           AQ EAEGK  ++KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME
Sbjct: 121 AQAEAEGKPAESKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME 180

Query: 237 IPYCIVKGKARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWG 296
           +PYCIVKGK+RLGA+VH+KTA+ LCLTTVKNEDKLEFS+ILEAIKANFNDKY+EYRKKWG
Sbjct: 181 VPYCIVKGKSRLGAVVHQKTAAALCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWG 240

Query: 297 GGIMGSKSQAKTKAKEKLLAKEAAQRMS 325
           GGIMGSKSQAKTKAKE+++AKEAAQRM+
Sbjct: 241 GGIMGSKSQAKTKAKERVIAKEAAQRMN 256

[Close]

BLAST of Clc01G05630 vs. ExPASy Swiss-Prot
Match: P49692 (60S ribosomal protein L7a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL7AA PE=2 SV=2)

HSP 1 Score: 425.6 bits (1093), Expect = 4.9e-118
Identity = 217/268 (80.97%), Postives = 245/268 (91.42%), Query Frame = 0


Query: 57  MAPKKAVGKVSTKKKPFSIDANLDCLQEKVVNPIFEKRPKQFGIGGALPPKRDLTRFVKW 116
           MAPKK V KV+ KKK            EKV NP+FE+RPKQFGIGGALPPK+DL+R++KW
Sbjct: 1   MAPKKGV-KVAAKKK----------TAEKVSNPLFERRPKQFGIGGALPPKKDLSRYIKW 60

Query: 117 PKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKRERLLKR 176
           PK +++QR+KRILKQRLKVPPALNQFTKTLDKNLAT+LFK+LLKYRPEDK  K+ERL+K+
Sbjct: 61  PKSIRLQRQKRILKQRLKVPPALNQFTKTLDKNLATSLFKVLLKYRPEDKAAKKERLVKK 120

Query: 177 AQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME 236
           AQ EAEGK  ++KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME
Sbjct: 121 AQAEAEGKPSESKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME 180

Query: 237 IPYCIVKGKARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWG 296
           +PYCIVKGK+RLGA+VH+KTAS LCLTTVKNEDKLEFS+ILEAIKANFNDKY+EYRKKWG
Sbjct: 181 VPYCIVKGKSRLGAVVHQKTASCLCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWG 240

Query: 297 GGIMGSKSQAKTKAKEKLLAKEAAQRMS 325
           GGIMGSKSQAKTKAKE+++AKEAAQRM+
Sbjct: 241 GGIMGSKSQAKTKAKERVIAKEAAQRMN 257

[Close]

BLAST of Clc01G05630 vs. ExPASy Swiss-Prot
Match: O57592 (60S ribosomal protein L7a OS=Takifugu rubripes OX=31033 GN=rpl7a PE=3 SV=3)

HSP 1 Score: 284.3 bits (726), Expect = 1.8e-75
Identity = 142/241 (58.92%), Postives = 187/241 (77.59%), Query Frame = 0


Query: 84  EKVVNPIFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKRILKQRLKVPPALNQFT 143
           +KVVNP+FEKRPK FGIG  + PKRDLTRFVKWP+ +++QR++ IL +RLKVPPA+NQFT
Sbjct: 25  KKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRSILYKRLKVPPAINQFT 84

Query: 144 KTLDKNLATNLFKMLLKYRPEDKTQKRERLLKRAQEEAEGKSH-DAKKPIVVKYGLNHVT 203
           + LD+  AT LFK+  KYRPE K +K++RLL RA+++A GK     K+P V++ G+N +T
Sbjct: 85  QALDRQTATQLFKLAHKYRPETKQEKKKRLLARAEQKAAGKGDAPTKRPPVLRAGVNTIT 144

Query: 204 YLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHKKTASVLCL 263
            L+E  KAQLVVIAHDVDPIELV++LPALCRKM +PYCIVKGKARLG +VH+KT + +  
Sbjct: 145 SLVENKKAQLVVIAHDVDPIELVIFLPALCRKMGVPYCIVKGKARLGRLVHRKTCTSVAF 204

Query: 264 TTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKEKLLAKEAAQR 323
           T    EDK   ++++EAIK N+ND+Y+E R+ WGGGI+G KS A+    EK  AKE A +
Sbjct: 205 TQTNPEDKGALAKLVEAIKTNYNDRYEEIRRHWGGGILGPKSTARINKLEKAKAKELATK 264

[Close]

BLAST of Clc01G05630 vs. ExPASy TrEMBL
Match: A0A5D3DB00 (60S ribosomal protein L7a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G001180 PE=3 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 2.5e-133
Identity = 253/268 (94.40%), Postives = 256/268 (95.52%), Query Frame = 0


Query: 57  MAPKKAVGKVSTKKKPFSIDANLDCLQEKVVNPIFEKRPKQFGIGGALPPKRDLTRFVKW 116
           MAPKKAVGKVS KKKP           EKVVNP+FEKRPKQFGIGGALPPKRDLTRFVKW
Sbjct: 1   MAPKKAVGKVSAKKKP-----------EKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKW 60

Query: 117 PKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKRERLLKR 176
           PKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKRERLLKR
Sbjct: 61  PKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKRERLLKR 120

Query: 177 AQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME 236
           AQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME
Sbjct: 121 AQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME 180

Query: 237 IPYCIVKGKARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWG 296
           IPYCIVKGKARLGA+VHKKTASVLCLTTVKNEDK+EFSRILEAIKANFNDKYDEYRKKWG
Sbjct: 181 IPYCIVKGKARLGAVVHKKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWG 240

Query: 297 GGIMGSKSQAKTKAKEKLLAKEAAQRMS 325
           GGIMGSKSQAKTKAKEKLLAKEAAQRMS
Sbjct: 241 GGIMGSKSQAKTKAKEKLLAKEAAQRMS 257

[Close]

BLAST of Clc01G05630 vs. ExPASy TrEMBL
Match: A0A1S3CUE8 (60S ribosomal protein L7a OS=Cucumis melo OX=3656 GN=LOC103504656 PE=3 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 2.5e-133
Identity = 253/268 (94.40%), Postives = 256/268 (95.52%), Query Frame = 0


Query: 57  MAPKKAVGKVSTKKKPFSIDANLDCLQEKVVNPIFEKRPKQFGIGGALPPKRDLTRFVKW 116
           MAPKKAVGKVS KKKP           EKVVNP+FEKRPKQFGIGGALPPKRDLTRFVKW
Sbjct: 1   MAPKKAVGKVSAKKKP-----------EKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKW 60

Query: 117 PKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKRERLLKR 176
           PKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKRERLLKR
Sbjct: 61  PKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKRERLLKR 120

Query: 177 AQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME 236
           AQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME
Sbjct: 121 AQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME 180

Query: 237 IPYCIVKGKARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWG 296
           IPYCIVKGKARLGA+VHKKTASVLCLTTVKNEDK+EFSRILEAIKANFNDKYDEYRKKWG
Sbjct: 181 IPYCIVKGKARLGAVVHKKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWG 240

Query: 297 GGIMGSKSQAKTKAKEKLLAKEAAQRMS 325
           GGIMGSKSQAKTKAKEKLLAKEAAQRMS
Sbjct: 241 GGIMGSKSQAKTKAKEKLLAKEAAQRMS 257

[Close]

BLAST of Clc01G05630 vs. ExPASy TrEMBL
Match: A0A0A0KPQ6 (60S ribosomal protein L7a OS=Cucumis sativus OX=3659 GN=Csa_5G171740 PE=3 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 1.4e-131
Identity = 250/268 (93.28%), Postives = 255/268 (95.15%), Query Frame = 0


Query: 57  MAPKKAVGKVSTKKKPFSIDANLDCLQEKVVNPIFEKRPKQFGIGGALPPKRDLTRFVKW 116
           MAPKKAVGKVS KKK            EKVVNP+FEKRPKQFGIGGALPPKRDLTRFVKW
Sbjct: 1   MAPKKAVGKVSAKKK-----------TEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKW 60

Query: 117 PKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKRERLLKR 176
           PKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQK+ERLLKR
Sbjct: 61  PKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKKERLLKR 120

Query: 177 AQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME 236
           AQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME
Sbjct: 121 AQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME 180

Query: 237 IPYCIVKGKARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWG 296
           IPYCIVKGKARLGA+VH+KTASVLCLTTVKNEDK+EFSRILEAIKANFNDKYDEYRKKWG
Sbjct: 181 IPYCIVKGKARLGAVVHQKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWG 240

Query: 297 GGIMGSKSQAKTKAKEKLLAKEAAQRMS 325
           GGIMGSKSQAKTKAKEKLLAKEAAQRMS
Sbjct: 241 GGIMGSKSQAKTKAKEKLLAKEAAQRMS 257

[Close]

BLAST of Clc01G05630 vs. ExPASy TrEMBL
Match: A0A6J1DUM7 (60S ribosomal protein L7a OS=Momordica charantia OX=3673 GN=LOC111024515 PE=3 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 1.8e-131
Identity = 250/268 (93.28%), Postives = 253/268 (94.40%), Query Frame = 0


Query: 57  MAPKKAVGKVSTKKKPFSIDANLDCLQEKVVNPIFEKRPKQFGIGGALPPKRDLTRFVKW 116
           MAPKKAVGK S KKKP           EKVVNP+FEKRPKQFGIGGALPPKRDLTRFVKW
Sbjct: 1   MAPKKAVGKASAKKKP-----------EKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKW 60

Query: 117 PKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKRERLLKR 176
           PK VQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDK QK+ERLLKR
Sbjct: 61  PKAVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKKERLLKR 120

Query: 177 AQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME 236
           AQEEAEGK+HDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME
Sbjct: 121 AQEEAEGKAHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME 180

Query: 237 IPYCIVKGKARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWG 296
           IPYCIVKGKARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWG
Sbjct: 181 IPYCIVKGKARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWG 240

Query: 297 GGIMGSKSQAKTKAKEKLLAKEAAQRMS 325
           GGIMGSKSQAKTKAKEKLLAKEAAQRMS
Sbjct: 241 GGIMGSKSQAKTKAKEKLLAKEAAQRMS 257

[Close]

BLAST of Clc01G05630 vs. ExPASy TrEMBL
Match: A0A6J1K385 (60S ribosomal protein L7a OS=Cucurbita maxima OX=3661 GN=LOC111491302 PE=3 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 4.0e-131
Identity = 250/268 (93.28%), Postives = 253/268 (94.40%), Query Frame = 0


Query: 57  MAPKKAVGKVSTKKKPFSIDANLDCLQEKVVNPIFEKRPKQFGIGGALPPKRDLTRFVKW 116
           MAPKKAVGKVS KKKP            KVVNP+FEKRPKQFGIGGALPPKRDLTRFVKW
Sbjct: 1   MAPKKAVGKVSAKKKPV-----------KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKW 60

Query: 117 PKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKRERLLKR 176
           PK VQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDK QKRERLLKR
Sbjct: 61  PKAVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKR 120

Query: 177 AQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME 236
           AQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME
Sbjct: 121 AQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME 180

Query: 237 IPYCIVKGKARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWG 296
           IPYCIVKGKARLGAIVH+KTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWG
Sbjct: 181 IPYCIVKGKARLGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWG 240

Query: 297 GGIMGSKSQAKTKAKEKLLAKEAAQRMS 325
           GGIMGSKSQAKTKAKE+LLAKEAAQRMS
Sbjct: 241 GGIMGSKSQAKTKAKERLLAKEAAQRMS 257

[Close]

BLAST of Clc01G05630 vs. TAIR 10
Match: AT3G62870.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 427.6 bits (1098), Expect = 9.2e-120
Identity = 217/268 (80.97%), Postives = 246/268 (91.79%), Query Frame = 0


Query: 57  MAPKKAVGKVSTKKKPFSIDANLDCLQEKVVNPIFEKRPKQFGIGGALPPKRDLTRFVKW 116
           MAPKK V KV++KKKP           EKV NP+FE+RPKQFGIGGALPPK+DL+R++KW
Sbjct: 1   MAPKKGV-KVASKKKP-----------EKVTNPLFERRPKQFGIGGALPPKKDLSRYIKW 60

Query: 117 PKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKRERLLKR 176
           PK +++QR+KRILKQRLKVPPALNQFTKTLDKNLAT+LFK+LLKYRPEDK  K+ERLL +
Sbjct: 61  PKSIRLQRQKRILKQRLKVPPALNQFTKTLDKNLATSLFKILLKYRPEDKAAKKERLLNK 120

Query: 177 AQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME 236
           AQ EAEGK  ++KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME
Sbjct: 121 AQAEAEGKPAESKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME 180

Query: 237 IPYCIVKGKARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWG 296
           +PYCIVKGK+RLGA+VH+KTA+ LCLTTVKNEDKLEFS+ILEAIKANFNDKY+EYRKKWG
Sbjct: 181 VPYCIVKGKSRLGAVVHQKTAAALCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWG 240

Query: 297 GGIMGSKSQAKTKAKEKLLAKEAAQRMS 325
           GGIMGSKSQAKTKAKE+++AKEAAQRM+
Sbjct: 241 GGIMGSKSQAKTKAKERVIAKEAAQRMN 256

[Close]

BLAST of Clc01G05630 vs. TAIR 10
Match: AT2G47610.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 425.6 bits (1093), Expect = 3.5e-119
Identity = 217/268 (80.97%), Postives = 245/268 (91.42%), Query Frame = 0


Query: 57  MAPKKAVGKVSTKKKPFSIDANLDCLQEKVVNPIFEKRPKQFGIGGALPPKRDLTRFVKW 116
           MAPKK V KV+ KKK            EKV NP+FE+RPKQFGIGGALPPK+DL+R++KW
Sbjct: 1   MAPKKGV-KVAAKKK----------TAEKVSNPLFERRPKQFGIGGALPPKKDLSRYIKW 60

Query: 117 PKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKRERLLKR 176
           PK +++QR+KRILKQRLKVPPALNQFTKTLDKNLAT+LFK+LLKYRPEDK  K+ERL+K+
Sbjct: 61  PKSIRLQRQKRILKQRLKVPPALNQFTKTLDKNLATSLFKVLLKYRPEDKAAKKERLVKK 120

Query: 177 AQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME 236
           AQ EAEGK  ++KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME
Sbjct: 121 AQAEAEGKPSESKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME 180

Query: 237 IPYCIVKGKARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWG 296
           +PYCIVKGK+RLGA+VH+KTAS LCLTTVKNEDKLEFS+ILEAIKANFNDKY+EYRKKWG
Sbjct: 181 VPYCIVKGKSRLGAVVHQKTASCLCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWG 240

Query: 297 GGIMGSKSQAKTKAKEKLLAKEAAQRMS 325
           GGIMGSKSQAKTKAKE+++AKEAAQRM+
Sbjct: 241 GGIMGSKSQAKTKAKERVIAKEAAQRMN 257

[Close]

BLAST of Clc01G05630 vs. TAIR 10
Match: AT4G22380.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 43.1 bits (100), Expect = 4.9e-04
Identity = 22/79 (27.85%), Postives = 37/79 (46.84%), Query Frame = 0


Query: 194 VKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVH 253
           +K G N  T  + +  ++ VV+A D +P+E+++ LP L     +PY  V  K  LG    
Sbjct: 35  LKKGANEATKTLNRGISEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACG 94

Query: 254 KKTASVLCLTTVKNEDKLE 273
                + C  T     +L+
Sbjct: 95  VTRPVIACSVTSNEASQLK 113

[Close]

BLAST of Clc01G05630 vs. TAIR 10
Match: AT4G12600.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 43.1 bits (100), Expect = 4.9e-04
Identity = 21/79 (26.58%), Postives = 37/79 (46.84%), Query Frame = 0


Query: 194 VKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVH 253
           +K G N  T  + +  ++ +V+A D +P+E+++ LP L     +PY  V  K  LG    
Sbjct: 35  LKKGANEATKTLNRGISEFIVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACD 94

Query: 254 KKTASVLCLTTVKNEDKLE 273
                + C  T     +L+
Sbjct: 95  VTRPVIACSVTSNEASQLK 113

[Close]

BLAST of Clc01G05630 vs. TAIR 10
Match: AT5G20160.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 43.1 bits (100), Expect = 4.9e-04
Identity = 22/79 (27.85%), Postives = 37/79 (46.84%), Query Frame = 0


Query: 194 VKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVH 253
           +K G N  T  + +  ++ VV+A D +P+E+++ LP L     +PY  V  K  LG    
Sbjct: 35  LKKGANEATKTLNRGISEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACG 94

Query: 254 KKTASVLCLTTVKNEDKLE 273
                + C  T     +L+
Sbjct: 95  VTRPVIACSVTSNEASQLK 113

The following BLAST results are available for this feature:

BLAST of Clc01G05630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008467259.1	5.2e-133	94.40	PREDICTED: 60S ribosomal protein L7a-2 [Cucumis melo] >KAA0055141.1 60S ribosoma...	[more]
XP_038876466.1	2.0e-132	94.40	60S ribosomal protein L7a-2 isoform X2 [Benincasa hispida]	[more]
XP_004143647.1	2.9e-131	93.28	60S ribosomal protein L7a-1 [Cucumis sativus] >KGN50392.1 hypothetical protein C...	[more]
XP_022157908.1	3.7e-131	93.28	60S ribosomal protein L7a-2 [Momordica charantia]	[more]
XP_038876464.1	3.7e-131	93.66	60S ribosomal protein L7a-2-like isoform X2 [Benincasa hispida]	[more]

BLAST of Clc01G05630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P35685	4.5e-119	83.64	60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-1 ...	[more]
P0DKK7	4.5e-119	83.64	60S ribosomal protein L7a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-2 ...	[more]
Q9LZH9	1.3e-118	80.97	60S ribosomal protein L7a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7AB PE=1 SV=1	[more]
P49692	4.9e-118	80.97	60S ribosomal protein L7a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL7AA PE=2 SV=2	[more]
O57592	1.8e-75	58.92	60S ribosomal protein L7a OS=Takifugu rubripes OX=31033 GN=rpl7a PE=3 SV=3	[more]

BLAST of Clc01G05630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DB00	2.5e-133	94.40	60S ribosomal protein L7a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3CUE8	2.5e-133	94.40	60S ribosomal protein L7a OS=Cucumis melo OX=3656 GN=LOC103504656 PE=3 SV=1	[more]
A0A0A0KPQ6	1.4e-131	93.28	60S ribosomal protein L7a OS=Cucumis sativus OX=3659 GN=Csa_5G171740 PE=3 SV=1	[more]
A0A6J1DUM7	1.8e-131	93.28	60S ribosomal protein L7a OS=Momordica charantia OX=3673 GN=LOC111024515 PE=3 SV...	[more]
A0A6J1K385	4.0e-131	93.28	60S ribosomal protein L7a OS=Cucurbita maxima OX=3661 GN=LOC111491302 PE=3 SV=1	[more]

BLAST of Clc01G05630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62870.1	9.2e-120	80.97	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT2G47610.1	3.5e-119	80.97	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT4G22380.1	4.9e-04	27.85	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT4G12600.1	4.9e-04	26.58	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT5G20160.1	4.9e-04	27.85	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001921	Ribosomal protein L7A/L8	PRINTS	PR00882	RIBOSOMALL7A	coord: 95..112 score: 71.21 coord: 156..169 score: 59.09 coord: 132..151 score: 74.09 coord: 251..275 score: 47.27 coord: 190..210 score: 62.77 coord: 283..303 score: 68.4 coord: 112..129 score: 60.61
IPR018492	Ribosomal protein L7Ae/L8/Nhp2 family	PRINTS	PR00881	L7ARS6FAMILY	coord: 213..226 score: 71.43 coord: 229..239 score: 64.46 coord: 239..253 score: 56.36 coord: 194..208 score: 45.76
IPR029064	50S ribosomal protein L30e-like	GENE3D	3.30.1330.30		coord: 116..299 e-value: 1.6E-81 score: 274.3
IPR029064	50S ribosomal protein L30e-like	SUPERFAMILY	55315	L30e-like	coord: 154..295
IPR004038	Ribosomal protein L7Ae/L30e/S12e/Gadd45	PFAM	PF01248	Ribosomal_L7Ae	coord: 181..271 e-value: 1.7E-25 score: 88.6
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 37..322
None	No IPR available	PANTHER	PTHR23105:SF168	BNAA03G47020D PROTEIN	coord: 37..322
IPR004037	Ribosomal protein L7Ae conserved site	PROSITE	PS01082	RIBOSOMAL_L7AE	coord: 232..249

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G05630.1	Clc01G05630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000470	maturation of LSU-rRNA
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003723	RNA binding