Clc01G05630 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTCGTGCTTACAGCATCATTTGCGTTGTCATTCTCCATTTTTCGTTTCTCCATTCATCGCCGACATCAAAAGGTTGCAGAGTCTCGTTTGTTGGTGCTCGAATGTCAAGTGCAATGGAGTGATAGAGAAAAGCGTGAGAGGATATTAAGAGAGAGAAAGTGAAAGCATGACAACGAGAAAGAGATAAGAGATTGAGAGAGAGGAAACCAAAAGAAAGAGTGAGAGCGAGACAACAATAAATAGAGGGGAGATCGAAAGTGAGTGGAAATGAAAAAAGGAAAGAGAGGAAATCGAAAGAAAGGGGAGGTCGAGACAAAGAGAGATCGAAAGGTCAATCCACATGCGTGAGGTTCTATTTTGGTAATTTTACACGGATATGACATAAACAAAAAGTTTAAAAAACCTCAAATTTTGAAAAGTAGAGCATGTTTCATTTCCTCTTCCCCCAATTTTAGGCTATCCATTCACTAAACCCTTAAGATTTAGACATAAATGATTTGAAATTTTAGAATTTAAGAAAATAGAAATGATTTCACATTTCAATAAGCATTTGAAATCATTATAAGTTTATTATCATATATGCAAACAAATCCATATAATCAAGGCATTGATCAATCTCATTTAATCAAACTTAAATCCACTCACTAAATCTCAATCTAAATAAAATGTAAATGTAACACCTACGTATATATAACTTGCGATGAGATCAATAAGTTATGTGCTTGCTTCTGGTAGGGGTTGTATAAGGGCAAGCATAAGTTCCATTAAAAAAGTTGGAAGAAATTGTGGAAGTGTGCAGGCTTTCGTAATCTTAGCCTCTTCAATCAAGCCATGCTCACTATTCACTAAAGTTAGCTAGCTCCTCCTGAAGCATCCGAAAAGCCTCTTCGTTAGAGTTCTTTGCACTCGTTACATTAAAGACCATAATTTCTTAAGGGCCCAGATGGGCTCTAACCCCTCGTATACATGGAGGAGCATTATTTGGGCTAGATACCTATTCAAGAAGGGGTTTAGGTGGAAAGTAGACAACGGTCGTTGTATCAAAATCGATCATGACCCATGGATTAACAGAAAAGGAAGTTGCATGCCTACGTTCTACATTATGCCATGGTCATTTGGCAGGGAAGTTGGTTCATGGCCTTTTTTAGGCCTAATGTGGTTGGAATGGGGGGTTTATCTGGAGTAGGTCCCCTCCTTTGATGTCGAAGTCATCCTCAACACACATGTGGCGATCGAGATTATTTTTTGAATTGCGACCCAAAATGTTGTTTTCTCCATGAAAAGTGCCTACCACCTGGCTATGTCTATTCAGTCTTCCAAGATCATGTCTTTGTCTGTTGAGAATCCTGATAAGTCAATGTGAAATTTCCTCAAAAGGCTAATGCCCTTCCTAGGGCTAAACATTGTGCTTGGAGGATCTTTTATCACATCATTCCCTCTAACATCAATACATCTAATATGGGAGTGTCGGCTAGTCCCATGTGTTTGTTTTGCAGGAAAGAATAGGAGTTTGCGCCTCATGCCCTATGGTACTATAAGTTGGCCAAGAGTATTTGGATTGAGTTCATTCCTAAAATGCAAACTATTTTTCTATTGTATAGGCCCCCTTTGCATCTTATAGAGCTTTGGAGTTGGATAGTTTAAATCCTTGATGAAGAGGCAAGGTGATTACAGTTTTGTAGTGTCTATGGAACTATCAGAACTCTATCAAGATCAACAAGCGAAAGCTTCGTTGGAGATATCGTATAAAAATGTTGATTTAAAAAAAAAAAAAGGTTGATTTCCCCACAAGAACAATTAATGGGGACCAAGTTTCTCATAGAAAAAAAATTATTGTTTTTTCTTTTTGAATTTAATAGCAACCAAAGTAGGCTTTTTTATATTTTATAAGTTTAAATGGAGCATTTTCGATACAGTTTTCATTTAAAGAAAAAGTTGTAAAATTTTCAATTAAAAACAATAATATTTAATGTACAAAAATATAATTAAAATGTTGAGGCATACTCTAACCTTAGACTCTCTTAAGAATGAGAGTTAAAATAAACGCCAAAAAGGAATCTTTCGAAATCAAAGAAAGACTTGAAAAAGATGTCAAAGTTGCATATTATCCCCACTAGGGATTTTACAAAAATCACATACATTCAAGGAGGCAGCAAAGATAAGAGCCTCAATCACCATAAAACAGACTTTAGTAAAGTTCGAATAAAAACCATTAAGGAGGCTCACAACCTCAAGTGAAATTAGACTCCACAAAAATCATACAATTTTGATCCTTCCATATAACACCTCACAACTTTGAAACCTTCCATGATAGCTTTAACTTCCAGCGCTTTCAATTGTCACTTATGGCAAATAAAGCTACACCCACCAACGATAGGGTTCTCATTACAATTTTGTTAAAAGAAACACTTAAATGCCTATCAAATTATTCAAAAGAAAAAAAATTAGCACAATTCTTTTTAGTTTTTAAAATTTGACTTGATTTTCGAAAATTGAAGACAAGAATACAAACTAAATATCAAAACATATAAAATTATGCACTAAAATCGTACTTACATGCTTACTTTTTAGGATCGAATAATTATCAACGATTGTTTTGTTTTTGCCACTATTTTTTCAGAAAAGTGATGCTTAATTTATCACACTTTATTCTTAATAGTTAAATTATTTCTTAAGAAAACATTTTAATACCCAACCAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTACTTTGAAGTGCAATTGTTGTTAATTAAAAAGTCATTTTATTAAAAAGTAAGAAAAATCGTACTGAATTTAAAGTTATTGTTATTAAATTTATATTTTATTGAAAAAAGAAAGGCAAGTGCAAAAAAAAAAGGCCGGGAATTTATATTTAATTTCGTTTTCTTCTTCCTTCTAAACCCTAGCCCTCCCCCCGCCTTCCGATCACTCTCGTTTTTACTATTACCTCGCCCAAAATGGTACCTTCTTTTTCTCTCGTTTAAGATGTTTCAATTTATTGTTTGCATTCTTATGTATGTTCTTCTTGTACTCTTGAAAGGCACCGAAGAAGGCTGTTGGAAAAGTTTCGACAAAAAAGAAGCCGGTAAATCCGTTGTTTTTTCCCTTGATGCGAATTTGTTGTTTCAGTTCTCTATTGATGCGAATTTGGATTGTTTGCAGGAGAAGGTGGTGAATCCGATATTTGAGAAGCGTCCGAAGCAGTTTGGAATCGGTGGGGCATTGCCGCCTAAGAGGGACCTCACACGCTTTGTCAAATGGCCCAAAGTTGTTCAAATTCAGAGGAAGAAGAGGATTCTGAAGCAGAGGCTCAAGGTTCCACCAGCTTTGAATCAGTTCACCAAGACCCTTGACAAGAATCTTGGTAACTAAACCCAAAATTCTCCCGGAGATTCCTATTACATGATTAGTATTTAGTCAGAAGATTTTAAAATTAATTGCTAGGTTTTAGATGATCATTATTGAGTAGTTTAGTAAATTGCGTGTTGTGTCCCTCTTCAGTTTATGCCTTTTGTTTTTTCAACTGGAACTCTCTTCATTTGTTATGAAGTATGAACTTTGTTAGGTTATAGGAGCGATAGTTTGTATGATTGCACTTAATTTAGGAGAGGTGTAGAAGTTTCTGCTACGGTGAAAGAAGAAATAAGTAGTTCCGTACCTTATTGATTGATGCTTTGGTTTGGCTACCTTGAGATACCATGTTTTGATTCGCTTTGCAAGTTTTTTGGGGAGTTGGTAATAAACTTCAGTCTCTTGGAACCTAAATTCTTCTCTTAGCTTTTTTTTTCCTCTTCTCGTTGGGTTTCTTGGATTATGCTTAGATCTTCTCACATTTTGGGTTGTTTAGACCTTCTAATGATTCTATTCTTATAATTGGTTCTCTTTATATAAACATGATTTATTCTTTATAGTATATGGTCGTGAATGAAATGTGCCTTTTTTTATGGTAGTTTTCATTTTCCTTTTAATAATTTTCATTTTTGGTCATTTGGAAAAATGTATTGGTTTCTGACCATATTCCAATAAACTCTTCTGGTCATCTTCCATGTGATTTTGATCAGATTTAAGATATATTTTGGCTTTTGCTTATGTCATCATCTATGTGGTTCTTTGATATTTGTTGGAACGTCGTTAGACGGTTGGTTTTACAAGCCTTTTCATGCATTTGCAGCAACAAACTTGTTCAAGATGCTTTTGAAGTATAGGCCAGAGGATAAAACACAGAAAAGGGAGCGTCTTTTGAAAAGAGCTCAGGAAGAGGCTGAAGGCAAATCACACGATGCCAAAAAGCCTATTGTTGTTAAATATGGTCTCAATCATGTTACCTATCTCATTGAGCAGGTCATATTTTATTCCATACATGTGAAATATTCCACCCTTTTCAACTGCAATGTTATCTGCAATCAGATACATTCCTTTTATCTTTAACATCCATATATTATGTACTTTATTTTCAGAACAAGGCACAACTGGTTGTGATTGCACACGATGTGGATCCGATCGAGTTGGTTGTATGGCTCCCAGCTTTGTGCAGGAAGATGGAAATTCCATATTGCATTGTGAAGGGAAAAGCACGATTGGGAGCGGTAACTGTATCTTTATTTAACACAATATTGTTTACTCCTTCGAAACCATGGATCAATGTTTTTGTAAATTTTCCTTTTTAATAACAGATTGTCCACAAAAAGACTGCATCAGTTTTGTGTTTGACAACCGTGAAGAATGAAGATAAGTTGGAGTTTAGCAGGATCCTGGAAGCCATTAAGGTGCCTTATACACATATAAAGCCAAGACAACTACACTTTATTTTATGGTATCTGAATTAGGCTCATATTTAACAACTTGTTCGTTGTTTTGTTTGATGTTAGGCTAATTTCAACGACAAGTACGACGAGTACAGGAAGAAGTGGGGTGGTGGAATCATGGGATCCAAGTCCCAGGCTAAAACCAAGGCAAAGGAGAAATTACTCGCCAAAGAAGCTGCTCAAAGGATGTCTTAG ATGTCTTCGTGCTTACAGCATCATTTGCGTTGTCATTCTCCATTTTTCGTTTCTCCATTCATCGCCGACATCAAAAGGTTGCAGAGTCTCGTTTGTTGGTGCTCGAATGTCAAGTGCAATGGAGTGATAGAGAAAAGCGAAAGAATAGGAGTTTGCGCCTCATGCCCTATGGCACCGAAGAAGGCTGTTGGAAAAGTTTCGACAAAAAAGAAGCCGTTCTCTATTGATGCGAATTTGGATTGTTTGCAGGAGAAGGTGGTGAATCCGATATTTGAGAAGCGTCCGAAGCAGTTTGGAATCGGTGGGGCATTGCCGCCTAAGAGGGACCTCACACGCTTTGTCAAATGGCCCAAAGTTGTTCAAATTCAGAGGAAGAAGAGGATTCTGAAGCAGAGGCTCAAGGTTCCACCAGCTTTGAATCAGTTCACCAAGACCCTTGACAAGAATCTTGCAACAAACTTGTTCAAGATGCTTTTGAAGTATAGGCCAGAGGATAAAACACAGAAAAGGGAGCGTCTTTTGAAAAGAGCTCAGGAAGAGGCTGAAGGCAAATCACACGATGCCAAAAAGCCTATTGTTGTTAAATATGGTCTCAATCATGTTACCTATCTCATTGAGCAGAACAAGGCACAACTGGTTGTGATTGCACACGATGTGGATCCGATCGAGTTGGTTGTATGGCTCCCAGCTTTGTGCAGGAAGATGGAAATTCCATATTGCATTGTGAAGGGAAAAGCACGATTGGGAGCGATTGTCCACAAAAAGACTGCATCAGTTTTGTGTTTGACAACCGTGAAGAATGAAGATAAGTTGGAGTTTAGCAGGATCCTGGAAGCCATTAAGGCTAATTTCAACGACAAGTACGACGAGTACAGGAAGAAGTGGGGTGGTGGAATCATGGGATCCAAGTCCCAGGCTAAAACCAAGGCAAAGGAGAAATTACTCGCCAAAGAAGCTGCTCAAAGGATGTCTTAG ATGTCTTCGTGCTTACAGCATCATTTGCGTTGTCATTCTCCATTTTTCGTTTCTCCATTCATCGCCGACATCAAAAGGTTGCAGAGTCTCGTTTGTTGGTGCTCGAATGTCAAGTGCAATGGAGTGATAGAGAAAAGCGAAAGAATAGGAGTTTGCGCCTCATGCCCTATGGCACCGAAGAAGGCTGTTGGAAAAGTTTCGACAAAAAAGAAGCCGTTCTCTATTGATGCGAATTTGGATTGTTTGCAGGAGAAGGTGGTGAATCCGATATTTGAGAAGCGTCCGAAGCAGTTTGGAATCGGTGGGGCATTGCCGCCTAAGAGGGACCTCACACGCTTTGTCAAATGGCCCAAAGTTGTTCAAATTCAGAGGAAGAAGAGGATTCTGAAGCAGAGGCTCAAGGTTCCACCAGCTTTGAATCAGTTCACCAAGACCCTTGACAAGAATCTTGCAACAAACTTGTTCAAGATGCTTTTGAAGTATAGGCCAGAGGATAAAACACAGAAAAGGGAGCGTCTTTTGAAAAGAGCTCAGGAAGAGGCTGAAGGCAAATCACACGATGCCAAAAAGCCTATTGTTGTTAAATATGGTCTCAATCATGTTACCTATCTCATTGAGCAGAACAAGGCACAACTGGTTGTGATTGCACACGATGTGGATCCGATCGAGTTGGTTGTATGGCTCCCAGCTTTGTGCAGGAAGATGGAAATTCCATATTGCATTGTGAAGGGAAAAGCACGATTGGGAGCGATTGTCCACAAAAAGACTGCATCAGTTTTGTGTTTGACAACCGTGAAGAATGAAGATAAGTTGGAGTTTAGCAGGATCCTGGAAGCCATTAAGGCTAATTTCAACGACAAGTACGACGAGTACAGGAAGAAGTGGGGTGGTGGAATCATGGGATCCAAGTCCCAGGCTAAAACCAAGGCAAAGGAGAAATTACTCGCCAAAGAAGCTGCTCAAAGGATGTCTTAG MSSCLQHHLRCHSPFFVSPFIADIKRLQSLVCWCSNVKCNGVIEKSERIGVCASCPMAPKKAVGKVSTKKKPFSIDANLDCLQEKVVNPIFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKEKLLAKEAAQRMS Homology
BLAST of Clc01G05630 vs. NCBI nr
Match: XP_008467259.1 (PREDICTED: 60S ribosomal protein L7a-2 [Cucumis melo] >KAA0055141.1 60S ribosomal protein L7a-2 [Cucumis melo var. makuwa] >TYK20718.1 60S ribosomal protein L7a-2 [Cucumis melo var. makuwa]) HSP 1 Score: 485.0 bits (1247), Expect = 5.2e-133 Identity = 253/268 (94.40%), Postives = 256/268 (95.52%), Query Frame = 0
BLAST of Clc01G05630 vs. NCBI nr
Match: XP_038876466.1 (60S ribosomal protein L7a-2 isoform X2 [Benincasa hispida]) HSP 1 Score: 483.0 bits (1242), Expect = 2.0e-132 Identity = 253/268 (94.40%), Postives = 255/268 (95.15%), Query Frame = 0
BLAST of Clc01G05630 vs. NCBI nr
Match: XP_004143647.1 (60S ribosomal protein L7a-1 [Cucumis sativus] >KGN50392.1 hypothetical protein Csa_000458 [Cucumis sativus]) HSP 1 Score: 479.2 bits (1232), Expect = 2.9e-131 Identity = 250/268 (93.28%), Postives = 255/268 (95.15%), Query Frame = 0
BLAST of Clc01G05630 vs. NCBI nr
Match: XP_022157908.1 (60S ribosomal protein L7a-2 [Momordica charantia]) HSP 1 Score: 478.8 bits (1231), Expect = 3.7e-131 Identity = 250/268 (93.28%), Postives = 253/268 (94.40%), Query Frame = 0
BLAST of Clc01G05630 vs. NCBI nr
Match: XP_038876464.1 (60S ribosomal protein L7a-2-like isoform X2 [Benincasa hispida]) HSP 1 Score: 478.8 bits (1231), Expect = 3.7e-131 Identity = 251/268 (93.66%), Postives = 254/268 (94.78%), Query Frame = 0
BLAST of Clc01G05630 vs. ExPASy Swiss-Prot
Match: P35685 (60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-1 PE=2 SV=1) HSP 1 Score: 429.1 bits (1102), Expect = 4.5e-119 Identity = 225/269 (83.64%), Postives = 243/269 (90.33%), Query Frame = 0
BLAST of Clc01G05630 vs. ExPASy Swiss-Prot
Match: P0DKK7 (60S ribosomal protein L7a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-2 PE=2 SV=1) HSP 1 Score: 429.1 bits (1102), Expect = 4.5e-119 Identity = 225/269 (83.64%), Postives = 243/269 (90.33%), Query Frame = 0
BLAST of Clc01G05630 vs. ExPASy Swiss-Prot
Match: Q9LZH9 (60S ribosomal protein L7a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7AB PE=1 SV=1) HSP 1 Score: 427.6 bits (1098), Expect = 1.3e-118 Identity = 217/268 (80.97%), Postives = 246/268 (91.79%), Query Frame = 0
BLAST of Clc01G05630 vs. ExPASy Swiss-Prot
Match: P49692 (60S ribosomal protein L7a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL7AA PE=2 SV=2) HSP 1 Score: 425.6 bits (1093), Expect = 4.9e-118 Identity = 217/268 (80.97%), Postives = 245/268 (91.42%), Query Frame = 0
BLAST of Clc01G05630 vs. ExPASy Swiss-Prot
Match: O57592 (60S ribosomal protein L7a OS=Takifugu rubripes OX=31033 GN=rpl7a PE=3 SV=3) HSP 1 Score: 284.3 bits (726), Expect = 1.8e-75 Identity = 142/241 (58.92%), Postives = 187/241 (77.59%), Query Frame = 0
BLAST of Clc01G05630 vs. ExPASy TrEMBL
Match: A0A5D3DB00 (60S ribosomal protein L7a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G001180 PE=3 SV=1) HSP 1 Score: 485.0 bits (1247), Expect = 2.5e-133 Identity = 253/268 (94.40%), Postives = 256/268 (95.52%), Query Frame = 0
BLAST of Clc01G05630 vs. ExPASy TrEMBL
Match: A0A1S3CUE8 (60S ribosomal protein L7a OS=Cucumis melo OX=3656 GN=LOC103504656 PE=3 SV=1) HSP 1 Score: 485.0 bits (1247), Expect = 2.5e-133 Identity = 253/268 (94.40%), Postives = 256/268 (95.52%), Query Frame = 0
BLAST of Clc01G05630 vs. ExPASy TrEMBL
Match: A0A0A0KPQ6 (60S ribosomal protein L7a OS=Cucumis sativus OX=3659 GN=Csa_5G171740 PE=3 SV=1) HSP 1 Score: 479.2 bits (1232), Expect = 1.4e-131 Identity = 250/268 (93.28%), Postives = 255/268 (95.15%), Query Frame = 0
BLAST of Clc01G05630 vs. ExPASy TrEMBL
Match: A0A6J1DUM7 (60S ribosomal protein L7a OS=Momordica charantia OX=3673 GN=LOC111024515 PE=3 SV=1) HSP 1 Score: 478.8 bits (1231), Expect = 1.8e-131 Identity = 250/268 (93.28%), Postives = 253/268 (94.40%), Query Frame = 0
BLAST of Clc01G05630 vs. ExPASy TrEMBL
Match: A0A6J1K385 (60S ribosomal protein L7a OS=Cucurbita maxima OX=3661 GN=LOC111491302 PE=3 SV=1) HSP 1 Score: 477.6 bits (1228), Expect = 4.0e-131 Identity = 250/268 (93.28%), Postives = 253/268 (94.40%), Query Frame = 0
BLAST of Clc01G05630 vs. TAIR 10
Match: AT3G62870.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein ) HSP 1 Score: 427.6 bits (1098), Expect = 9.2e-120 Identity = 217/268 (80.97%), Postives = 246/268 (91.79%), Query Frame = 0
BLAST of Clc01G05630 vs. TAIR 10
Match: AT2G47610.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein ) HSP 1 Score: 425.6 bits (1093), Expect = 3.5e-119 Identity = 217/268 (80.97%), Postives = 245/268 (91.42%), Query Frame = 0
BLAST of Clc01G05630 vs. TAIR 10
Match: AT4G22380.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein ) HSP 1 Score: 43.1 bits (100), Expect = 4.9e-04 Identity = 22/79 (27.85%), Postives = 37/79 (46.84%), Query Frame = 0
BLAST of Clc01G05630 vs. TAIR 10
Match: AT4G12600.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein ) HSP 1 Score: 43.1 bits (100), Expect = 4.9e-04 Identity = 21/79 (26.58%), Postives = 37/79 (46.84%), Query Frame = 0
BLAST of Clc01G05630 vs. TAIR 10
Match: AT5G20160.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein ) HSP 1 Score: 43.1 bits (100), Expect = 4.9e-04 Identity = 22/79 (27.85%), Postives = 37/79 (46.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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