Clc01G00790 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G00790
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	DEAD-box ATP-dependent RNA helicase 10
Location	ClcChr01: 532493 .. 539928 (+)
RNA-Seq Expression	Clc01G00790
Synteny	Clc01G00790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTAAAACACGCGGACCGAGAGACAGAGAAACTCAGCCGCCGGTCATTATTTTTAGAGGTCTCGGTTCACAGACGGAATTACGCCGCCGTGGGTCTCTGTGAAGAAGGCTTTAACGTAGGCTGTGGGTCTCTCGGTGCTGGGGCTGGAAACGGCGTGGGTCTTGGTTTTCTGGTAGCATCAGACGACGGTTGTTGCTGTGTGTTTCACGGTGGGTTCCGATTAGTCACAAGTGGTTTAGCTCGTGAGGTGATTTCACGGGGGGTATTCGTTTGAAGCTCAAATCGGTCAAGGTTTGAGGTACTTTTGTTGTTATTGAAGCACCATATATCGTAGCTGAGTTTCTCGTTGCTGCAAATTTTGTTCTGTATTGGGTCTATTAGAGTTCGGTTTTTTTACAGTAGTTTTTCATATTATCAGCGAAAACTTTTGATTCTCTATCAAAAAAAGATATTGCGTAATGTTGGTCTAATTAATGTACACTTTTTATAGTAATTTTATGCTGCCGGAGAAATTCATTGCCCTCTGATGACAAACCTTTATTATTGGTATAGATGTTCTGGCAACGAGCATTATCCCTGAAGTTACTTACTTTTATTCCGTACTGAGTTTCACAATTCTAATTCTTCACCTTCTCATGTTTATAACTTTACCTCTGTCACATCGAATCTTAAATCAAGGACTATAACCCAAGTTTTTATTTTGTTTTATTTTCCAGATTGAACGGTGGCAATGGAGCAAGACAGTGAAGAAGAGGTAAAGACGTTTCAGAGCTTAGGAATATGTGAGCAATTGGTGGAGGCATGCGAGAGTTTAGGCTGGAAAAATCCATCAAAGATTCAGGCGGAGGCTATTCCTCATGCCCTAGAAGGTTCTTTCTTTAGCTTATGCATTTACTCAGTTCATTTTATCTTCAAATATATATATATATATATATATATATATATATATATATATATATATATATAAAAGTATTAGGTTGATTAAGTTGGATAGCTCTGGTTTTATGTGCGGGATAGTTATTTTGACCCACCTTTCTCTTTTTAGTTTTTAGATCAGGAGACAGTGCAATCACTTAAATGCTGGGTCTCACTTTTTTAAGGATCAATAAGGCCCATAGTATTTTTGTGGTAGCTGCCTTTGAGAAATATTTCCTATATTAAAGTTTTTGGCTTTCTCCAGTAGAAACTATGGCTTCTTGACCTTTACTTGCAAAATAGGTAAATTGATCAAATCAATGGTTAAATGTGGATCGCGAGTATGCAAAATTTGAATGCTGTTGTCATAATTTTATTAGATGTTCTCGATGGGACTTTCACTGTGTCGTATTAGTATAACAAACATAAGTTCCTCTGTCTAGGCTTGTCACTGCTTACGGCAGTGCATTCTGTTCGTTACTTATGCATGGCCATGTGTTCAAGGATGATTAGCTTTCTAGTGACTGAGACTTTGCTGAGAGATTTAGTATCAAGATGAAATACAACAAAAGTAGAATGATTACCTAATTGGTTCTCAGTAGGCCAGACATGAAATCCATCCAAAATTCCAGAGATATTCTTGAGTGGTAGAAAGATTGCTGATGGTGAATGTTATTTATTATTATGAGTGTGGACTTTGAAGCTTGGCACATTAGACACCTTCTAATAAGTAATAAGTTTCTCCTATGCGAAGAAATATAAATGCATCATAGGATAACATGAAGTTGTAGGTTTGAATTTCCACCTGGACATGTGATGTATCTAATGTCGTAAAAGAAATGCAAGCACATATGCAGACATGTGACATAGACAATATGGATATTGTGAAATGTCATAAAGTAGGACACCACATGTTAATCTATTGCAAGACCTCCAATCATCCACATGTATGGAAGGAAGGGCAAGAAGGTAATTCCAGGTAGACCAAATGTTAGTGGATAGTGGAAGGAGGTTGTACAAGAGAAAGAAGGAGGGAACCACGAAGGAACTAGAGGTTGAGGCCATGGGAAGGAGGGGTGAAGTAGGGTTATGTGAAGGAAGTCTGGTGTGAATAATTTTAGAGAAAGTAAGGTCTTCTTTGAGAGAATTCTTAGCTCTCTCAAATGTGCCCCCGTCTCTTTGGAATATTGTGTTTTTTTGGGGCGGCCCTGTTGGCAAAGTTATGTGGTTTTTTTGGTAATACCTACCCAGAGGTTGTGTGTTCGAACCTTTGGGTGAGCTTAATAAGAACAACCCTTGATGCCTTAGGACCTAGGCCTTGGATAGTAGGCTGGGCCCTTACACCTGGGTATCAAAAAGATATTTATTACTGAAAAATTAATTTGAGCCTTTTATGTATTTTCATTCTTTTTAAAATGCAGGTCTAATAATTATCTGTGGTGGTTCTTCTTCCCTTTATTCATGCTTTGTTTTTACTATAATTTCTTCTCAACTTATGTTTGTGGTATTGATAATGTTCAACCCTATGGCCGTTGTAATGCAGGAAAGGATCTAATTGGACTTGCACAAACTGGTTCTGGGAAAACTGGAGCTTTTGCTCTTCCCATTTTGCAAGCTCTCTTGGAAGCTCCTCAAGCATTTTTTGCCTGTGTGCTCTCTCCCACAAGGTTTAATACTGAATTGTAGTAGATTATATGTACACAGACATTTTTATCCTTAAAAAGGAGATTACGCATCTTTTTGAAAGATTTTAGAATGTCTATGAACTACAATTATTTGTTGCTATTGTTATTCTTCAGGGAGCTTGCAATTCAGATAGCTGAGCAGTTTGAAGCTTTAGGGTCTGGCATTGGTATTAAGTGTGCAGTGGTAGGCTTTCAACTAATAAAGTATACTGAGAATCAAAAATCATGAGGATATTATATTATACGTGAGCAAAAAAAGGCTTATGTATGTACCAAATTACTATGTCTTAACCGTTAAATAATGAAAAATCTAAGTAATTTGTGCACATTATCATCCTGTTCATGAGTAAGAATCAAGACTAGTTTGGCAATCAATTTTTGCTATCTAAAGGGAGGTGGTTTGTTCAAGAATAGATTAGTGCATGGGAGTGTATTTATAGGAAGCTTGCATGTAGGGGTCTAGTTTGCATTGGTGGCTTATAATTGTGAGTAGAAGGCAGAAATAGAGATTGGATGTCATAGAGATCAGGTCATATGAACTGATTAAGACAAATGGAGTGTGGCTCCTATAAGTGATTGCATTGCGTTTTTGTACTTCGATAATTAGCAAACATGGAGCCTTATTGGTGATGAGTATTTTCTTCTAATCTTCTTTAGCTTGTCGGAGGGGTAGACATGGTGCAGCAAGCCATTAACCTGGCAAAACGGCCACATATTGTTGTAAGTCTCCTTGATATTTCCTGCTTCTCTTGAACCTGATTGCAATGGTCTATGTGAAAATTTATGTCCTCTTTTTTGACATTATCCTTTTATCTAGATGTTTATTTAAGATTTCATTTATTTTGTTTTAGGTTGGGACACCTGGACGCCTTGTGGACCATCTAACCAATACGAAAGGTTTTTCTCTGCGCACATTGAAGTATCTGGTGAGTTTTGTACACAATTATGTTCAAGTTTTCCTGGTATGGTGAGACAATAAGCTTGTAGTGACTAGCCTGTTTTGCATGTCGAGCAGGTTCTTGATGAGGCAGATAGGTTACTGAATGAAGACTTTGAAAAATCAATTGATGAAATTCTGAATGAAATTCCTCGTGAGAGGAGAACATATCTATTTTCTGCTACTATGACAAAAAAGGTATACGAGGAAACACTTTATTTGATTTTCTGTTTTTATCTCCTTCTTTTCCTTTTTATTTTCCATGAAGAACAATGTTGTGTCAGAGAAATAAGAATTATTTAAAAAAGTTCCAACAGAAAAGTTTATCATGCTGTCACCATTGTATCTTATCCAATGCTATGGGATATGCTAATACACCGCCATTTAGGTGTGTGGTTCTATTTATTCATTTTTATTTTTAATTTGCTTCTTTTAACAGAAGTTTTAAAGAAATAAAAATAGGTAGCATAGAAGTCTATATACTTACAATATTATAAAGCTTCCTTGGTTTAGTTTTTCAATATGCAATGTTATAAGTGGGCATGGGAGATGCTAAACACCGTCATTGAGGCATGTGTGGTGCTGTGCCTCAGGGTTCCTTTTTTCCTTCCCCTCCTTTTGCTTTCTTTTAATAAACATTTTAAAGAAATAAGAAATAAGTAGCATAAAAGCTATACATTTACAATCTAAAAACTTCCTGGATTTATTTTTCAATATCTCATTGTCACAATGCTTTATATATTTTTTATATGTGCTTATTTTTATTATTATCTTTATTTTTCTCTTCGGCACCTCATAATTCGTACCCTTTACAAGTATCATCCATTAGTATTAAATTGTTTATTCTGGATGCATAGATGTGGCGCGTCATTATCTTTTCTGAATAAGTATTTTCTGAACACTGGTAGATTTATTTTTGGTGTTTTGTAATGGTTTAAATTGCTGACCAAGTTGAGACTACAGGTTCGGAAACTTCAAAGGGCATGCTTAAGGAATCCTGTTAAGGTATGATCGTGACTATCTAAGATCTTGTTTTCATTTCCTGAGTTTATTTAAATATTATTTTTTCTTTGTCTTGAATTCTATCAGATTGAAGCGGCAACCAAATATTCCACAGTAGACACACTAAAGCAGCAATATTGTTTTATCCCTGCGAAGTATAAGGTTTTCATACTTTGCTTTTTTATTTTTATTTTTTGTTTATGTCTAATTTTGTTGATTTTGCATATTTTAAGGATGCCAATTCCCCCCTAGTGAGTCCTCATACCATTTGATAGCTTTTCTCTTGTATGTATGGATGGTTAGAATGAACATGTGTTGATTAGTTTGAAGCGTGGTAGATAATTGGGTGAGAATGAGGCTTCATGCATTCCCCCAAGCGTGATTGTTTTTTTTCCTTTTTAATAAATAAAGAACCAAGCTTTCATTGATACAGATGAAAAATGGAAGAACAAAAAGTAATACACACCACAAACTAAGTTACTATTAGAAAAACACTTTTTGTATGCCGCTGTATTCATTCATTTTTTCCTCAATGAAAGCAGATGTTTCTATGAAAAAATCTATTAGAAAAACACTTGGCAGTCTTCTACAAACACTTGGCAGTTGTTATATGCAAGTGATTGGGAGTGTAGTAGGGATTGGCGTTTCAACTTTTGGAGGAAAACACATTTATTTTACCGTTGGCCTTATTTTATTACATGTCATCTTGTACAGGAGTGTTATCTTGTCTATATCTTAACTGAGATGTCTGGTTCAACATCAATGGTCTTCACTCGCACTTGTGACGCCACTCGCCTTCTATCATTGATTCTTCGAAATCTTGGATTAAGAGCCATACCCATAAGTGGTCAGATGACCCAGGTATTGTTGTGATATAACTCAGCGGTTTAATATTTGCTTATTAGTTGTGTCTAAAAAAGAATTGGTTGTTGGGAAAACCTCTCTTTTCTTTGGAAAATGAGTATAAAACCCTAAGAGAACAGAAAGAGAGAGAGAATGAAAAGGAATTGCAGAGAATTCTATTATTGTGTCAATCAGAGATTCAGAGAAAAGATGCATATGGACAGCATGGTACAATAGTCACGTGACTGAAAAGCGCAGGCAAAGAAATAAAACTAACAAGCAAATGAAAAAACATAAACCTGGAAAATACGAACGTAAATACATATTAATGACTCGAAAGTCTAAGCATTATGTTTAACAGCTTCATCATTTTGTGGAATTATTCAATTAAACTCTGTGCATGGATCATATCTTTGACAGGCAAAGAGACTAGGAGCCTTAAATAAGTTCAAGGCTGGAGAGTGCAATGTTCTCATCTGTACTGATGTGGCTAGCAGAGGACTTGATATTCCATCTGTGGATATGGTCATCAATTATGATATTCCTTCAAATTCCAAGGTTCTCCTTCTGCAATTCTATGTATCATTAGCTTCTATGCCTTCTGCTGTTTGCGTTAATTTATGTATTGATGTATCTTTTTTTCTTATATTCCAATTCAACCACTACATGCTTGATATTTTCTTATTTAGTTGTTATCGGGGTTTAACTTGACCCAATTAATAATATTTTATTTTCTGTTGAAATACTCTTCTACTCCTTTTTGTTATCTTATTATCTTGGATGTTGCTAGTTTACTGCAAACCTTTCGACCATTAGCTCCATTGAAGAACTACCTAAACTAAAAACCCACATGTTGAGACTTGATGGAAATTGGCGTTTAGCTAACTCAAGGGTTAGGTCTCAATCTCTTCCAACGCTCTTCTAAGACTACTTTGTCTGCAGGATTACATACATAGAGTTGGAAGAACTGCTCGTGCAGGTCGTTCTGGGGTTGCCATCTCCTTGGTTAATCAGTATGAGTTAGAGTGGTATATACAGATAGAGAAGCTCATAGGTAACCGATGGATGGACCCTTATTTATATAACTATTATTCTTAATTATTTTATTTTATTTTATTTTTATATAACTGACTTCTATTAATATGGCAGGGAAAAAATTACCGCAGTTTTCCGCTCAAGAAGAGGAAGTTTTGATGCTGTTAGAGCGTGTGACAGAGGCAAAGAGAATATCTCTCATGGTATTAAATTATGATTACAATTTCTTTTAGGTTAAACCATATTGTGTCCAAAAGATACACCTCTCTGATCCTTCCCTATATACAAATGTAAGCACCCGAAACACCAAATCCTTCCAGAGCCCAAACCTCCATTTCTCCCACCCATTGTCCACCTTGCTTGGCCCTTCCTCTAAGGGGTTGTTGTGTAACAAGTGCATAATGTCTATTGGAACGTCCGTGTATTTTATCATCAACTTGATGAATTAATTTCAAGATATAAGGCTCATCCGAAGGAACTAACATGAACCCATAGACTTCAGTAATCAGGGGTGTGTATCATGTGCCTCAATACGTCATTACACGTTCATTTCCGTGTCTGATAAGTTTCAGTGTAGAGACCAAACTTAACTAGGCTTATTCCTAAATCACGTGTTTTGATGGATTACATGGTTCCTTGCATGCTCAATTTTTTTTTTTTTTCCCCAACTTGGTTAATGTGGTTATCGAACATGTGCAGAAAATTAAAGAAGCTGGTGGTAAAAAGAGGAGGCGAGGTGGAGATGACGACGATGACAACGACAATAACGATGTTGAAAAGTATTTGCGTCTCAAGACTGGAAAGGGTGGAAAAATGTCCAAGAATGGAAAAACATCCAAGAAGTTGAAAAGAAGATGAGTCAAAATTATTTATATTTATAATTTGAAGAGTTTCAAATCGTTTGCTTCAAATTTTGCTATAGTTTCAGGCGAATATGATGTTCTAAGTTGAATACAAATCATTAATGAATGAGCAATTTTGGCCATGTCTTGTATTTAAGTTACTCGTATTGGTATAAA

mRNA sequence

GGTAAAACACGCGGACCGAGAGACAGAGAAACTCAGCCGCCGGTCATTATTTTTAGAGGTCTCGGTTCACAGACGGAATTACGCCGCCGTGGGTCTCTGTGAAGAAGGCTTTAACGTAGGCTGTGGGTCTCTCGGTGCTGGGGCTGGAAACGGCGTGGGTCTTGGTTTTCTGGTAGCATCAGACGACGGTTGTTGCTGTGTGTTTCACGGTGGGTTCCGATTAGTCACAAGTGGTTTAGCTCGTGAGGTGATTTCACGGGGGGTATTCGTTTGAAGCTCAAATCGGTCAAGGTTTGAGATTGAACGGTGGCAATGGAGCAAGACAGTGAAGAAGAGGTAAAGACGTTTCAGAGCTTAGGAATATGTGAGCAATTGGTGGAGGCATGCGAGAGTTTAGGCTGGAAAAATCCATCAAAGATTCAGGCGGAGGCTATTCCTCATGCCCTAGAAGGAAAGGATCTAATTGGACTTGCACAAACTGGTTCTGGGAAAACTGGAGCTTTTGCTCTTCCCATTTTGCAAGCTCTCTTGGAAGCTCCTCAAGCATTTTTTGCCTGTGTGCTCTCTCCCACAAGGGAGCTTGCAATTCAGATAGCTGAGCAGTTTGAAGCTTTAGGGTCTGGCATTGGTATTAAGTGTGCAGTGCTTGTCGGAGGGGTAGACATGGTGCAGCAAGCCATTAACCTGGCAAAACGGCCACATATTGTTGTTGGGACACCTGGACGCCTTGTGGACCATCTAACCAATACGAAAGGTTTTTCTCTGCGCACATTGAAGTATCTGGTTCTTGATGAGGCAGATAGGTTACTGAATGAAGACTTTGAAAAATCAATTGATGAAATTCTGAATGAAATTCCTCGTGAGAGGAGAACATATCTATTTTCTGCTACTATGACAAAAAAGGTTCGGAAACTTCAAAGGGCATGCTTAAGGAATCCTGTTAAGATTGAAGCGGCAACCAAATATTCCACAGTAGACACACTAAAGCAGCAATATTGTTTTATCCCTGCGAAGTATAAGGAGTGTTATCTTGTCTATATCTTAACTGAGATGTCTGGTTCAACATCAATGGTCTTCACTCGCACTTGTGACGCCACTCGCCTTCTATCATTGATTCTTCGAAATCTTGGATTAAGAGCCATACCCATAAGTGGTCAGATGACCCAGGCAAAGAGACTAGGAGCCTTAAATAAGTTCAAGGCTGGAGAGTGCAATGTTCTCATCTGTACTGATGTGGCTAGCAGAGGACTTGATATTCCATCTGTGGATATGGTCATCAATTATGATATTCCTTCAAATTCCAAGTTTACTGCAAACCTTTCGACCATTAGCTCCATTGAAGAACTACCTAAACTAAAAACCCACATGTTGAGACTTGATGGAAATTGGCGTTTAGCTAACTCAAGGGATTACATACATAGAGTTGGAAGAACTGCTCGTGCAGGTCGTTCTGGGGTTGCCATCTCCTTGGTTAATCAGTATGAGTTAGAGTGGTATATACAGATAGAGAAGCTCATAGGGAAAAAATTACCGCAGTTTTCCGCTCAAGAAGAGGAAGTTTTGATGCTGTTAGAGCGTGTGACAGAGGCAAAGAGAATATCTCTCATGGTTAAACCATATTGTGTCCAAAAGATACACCTCTCTGATCCTTCCCTATATACAAATAAAATTAAAGAAGCTGGTGGTAAAAAGAGGAGGCGAGGTGGAGATGACGACGATGACAACGACAATAACGATGTTGAAAAGTATTTGCGTCTCAAGACTGGAAAGGGTGGAAAAATGTCCAAGAATGGAAAAACATCCAAGAAGTTGAAAAGAAGATGAGTCAAAATTATTTATATTTATAATTTGAAGAGTTTCAAATCGTTTGCTTCAAATTTTGCTATAGTTTCAGGCGAATATGATGTTCTAAGTTGAATACAAATCATTAATGAATGAGCAATTTTGGCCATGTCTTGTATTTAAGTTACTCGTATTGGTATAAA

Coding sequence (CDS)

ATGGAGCAAGACAGTGAAGAAGAGGTAAAGACGTTTCAGAGCTTAGGAATATGTGAGCAATTGGTGGAGGCATGCGAGAGTTTAGGCTGGAAAAATCCATCAAAGATTCAGGCGGAGGCTATTCCTCATGCCCTAGAAGGAAAGGATCTAATTGGACTTGCACAAACTGGTTCTGGGAAAACTGGAGCTTTTGCTCTTCCCATTTTGCAAGCTCTCTTGGAAGCTCCTCAAGCATTTTTTGCCTGTGTGCTCTCTCCCACAAGGGAGCTTGCAATTCAGATAGCTGAGCAGTTTGAAGCTTTAGGGTCTGGCATTGGTATTAAGTGTGCAGTGCTTGTCGGAGGGGTAGACATGGTGCAGCAAGCCATTAACCTGGCAAAACGGCCACATATTGTTGTTGGGACACCTGGACGCCTTGTGGACCATCTAACCAATACGAAAGGTTTTTCTCTGCGCACATTGAAGTATCTGGTTCTTGATGAGGCAGATAGGTTACTGAATGAAGACTTTGAAAAATCAATTGATGAAATTCTGAATGAAATTCCTCGTGAGAGGAGAACATATCTATTTTCTGCTACTATGACAAAAAAGGTTCGGAAACTTCAAAGGGCATGCTTAAGGAATCCTGTTAAGATTGAAGCGGCAACCAAATATTCCACAGTAGACACACTAAAGCAGCAATATTGTTTTATCCCTGCGAAGTATAAGGAGTGTTATCTTGTCTATATCTTAACTGAGATGTCTGGTTCAACATCAATGGTCTTCACTCGCACTTGTGACGCCACTCGCCTTCTATCATTGATTCTTCGAAATCTTGGATTAAGAGCCATACCCATAAGTGGTCAGATGACCCAGGCAAAGAGACTAGGAGCCTTAAATAAGTTCAAGGCTGGAGAGTGCAATGTTCTCATCTGTACTGATGTGGCTAGCAGAGGACTTGATATTCCATCTGTGGATATGGTCATCAATTATGATATTCCTTCAAATTCCAAGTTTACTGCAAACCTTTCGACCATTAGCTCCATTGAAGAACTACCTAAACTAAAAACCCACATGTTGAGACTTGATGGAAATTGGCGTTTAGCTAACTCAAGGGATTACATACATAGAGTTGGAAGAACTGCTCGTGCAGGTCGTTCTGGGGTTGCCATCTCCTTGGTTAATCAGTATGAGTTAGAGTGGTATATACAGATAGAGAAGCTCATAGGGAAAAAATTACCGCAGTTTTCCGCTCAAGAAGAGGAAGTTTTGATGCTGTTAGAGCGTGTGACAGAGGCAAAGAGAATATCTCTCATGGTTAAACCATATTGTGTCCAAAAGATACACCTCTCTGATCCTTCCCTATATACAAATAAAATTAAAGAAGCTGGTGGTAAAAAGAGGAGGCGAGGTGGAGATGACGACGATGACAACGACAATAACGATGTTGAAAAGTATTTGCGTCTCAAGACTGGAAAGGGTGGAAAAATGTCCAAGAATGGAAAAACATCCAAGAAGTTGAAAAGAAGATGA

Protein sequence

MEQDSEEEVKTFQSLGICEQLVEACESLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQQAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYLVYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGECNVLICTDVASRGLDIPSVDMVINYDIPSNSKFTANLSTISSIEELPKLKTHMLRLDGNWRLANSRDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLLERVTEAKRISLMVKPYCVQKIHLSDPSLYTNKIKEAGGKKRRRGGDDDDDNDNNDVEKYLRLKTGKGGKMSKNGKTSKKLKRR

Homology

[Close]

BLAST of Clc01G00790 vs. NCBI nr
Match: XP_008437560.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 10 [Cucumis melo] >KAA0042572.1 DEAD-box ATP-dependent RNA helicase 10 [Cucumis melo var. makuwa] >TYK05976.1 DEAD-box ATP-dependent RNA helicase 10 [Cucumis melo var. makuwa])

HSP 1 Score: 821.6 bits (2121), Expect = 3.6e-234
Identity = 442/503 (87.87%), Postives = 448/503 (89.07%), Query Frame = 0


Query: 1   MEQDSEEEVKTFQSLGICEQLVEACESLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60
           MEQD+EEEVKTFQSLGICEQLVEAC+SLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK
Sbjct: 1   MEQDNEEEVKTFQSLGICEQLVEACDSLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60

Query: 61  TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120
           TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ
Sbjct: 61  TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120

Query: 121 QAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180
           QAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE
Sbjct: 121 QAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180

Query: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYL 240
           IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYL
Sbjct: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYL 240

Query: 241 VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC 300
           VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC
Sbjct: 241 VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC 300

Query: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSKFTANLSTISSIEELPKLKTHMLRLDGNWR 360
           N+LICTDVASRGLDIPSVDMVINYDIPSNSK                             
Sbjct: 301 NILICTDVASRGLDIPSVDMVINYDIPSNSK----------------------------- 360

Query: 361 LANSRDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLL 420
                DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLL
Sbjct: 361 -----DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLL 420

Query: 421 ERVTEAKRISLMVKPYCVQKIHLSDPSLYTNKIKEAGGKKRRRGGDDDDDNDNNDVEKYL 480
           ERVTEAKRISLM                   KIKE GGKKRRRGGDD+DDNDNNDVEKYL
Sbjct: 421 ERVTEAKRISLM-------------------KIKETGGKKRRRGGDDEDDNDNNDVEKYL 449

Query: 481 RLKTGKGGKMSKNGKTSKKLKRR 504
           R KTGKGGKMSKNGKTSKK+KR+
Sbjct: 481 R-KTGKGGKMSKNGKTSKKMKRK 449

[Close]

BLAST of Clc01G00790 vs. NCBI nr
Match: XP_011654632.1 (DEAD-box ATP-dependent RNA helicase 10 [Cucumis sativus] >KGN49894.1 hypothetical protein Csa_000132 [Cucumis sativus])

HSP 1 Score: 819.7 bits (2116), Expect = 1.4e-233
Identity = 440/503 (87.48%), Postives = 447/503 (88.87%), Query Frame = 0


Query: 1   MEQDSEEEVKTFQSLGICEQLVEACESLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60
           MEQD+ EEVKTFQSLGICEQLVEAC+SLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK
Sbjct: 1   MEQDN-EEVKTFQSLGICEQLVEACDSLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60

Query: 61  TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120
           TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ
Sbjct: 61  TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120

Query: 121 QAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180
           QAINLAKRPH+VVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE
Sbjct: 121 QAINLAKRPHVVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180

Query: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYL 240
           IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYL
Sbjct: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYL 240

Query: 241 VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC 300
           VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC
Sbjct: 241 VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC 300

Query: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSKFTANLSTISSIEELPKLKTHMLRLDGNWR 360
           N+LICTDVASRGLDIPSVDMVINYDIPSNSK                             
Sbjct: 301 NILICTDVASRGLDIPSVDMVINYDIPSNSK----------------------------- 360

Query: 361 LANSRDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLL 420
                DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLL
Sbjct: 361 -----DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLL 420

Query: 421 ERVTEAKRISLMVKPYCVQKIHLSDPSLYTNKIKEAGGKKRRRGGDDDDDNDNNDVEKYL 480
           ERV EAKRISLM                   KIKE GG+KRRRGGDDDDDN+NNDVEKYL
Sbjct: 421 ERVAEAKRISLM-------------------KIKETGGRKRRRGGDDDDDNENNDVEKYL 449

Query: 481 RLKTGKGGKMSKNGKTSKKLKRR 504
           RLKTGKGGKMSKNGKTSKK+KRR
Sbjct: 481 RLKTGKGGKMSKNGKTSKKMKRR 449

[Close]

BLAST of Clc01G00790 vs. NCBI nr
Match: XP_038876108.1 (DEAD-box ATP-dependent RNA helicase 10 [Benincasa hispida])

HSP 1 Score: 808.5 bits (2087), Expect = 3.2e-230
Identity = 439/503 (87.28%), Postives = 443/503 (88.07%), Query Frame = 0


Query: 1   MEQDSEEEVKTFQSLGICEQLVEACESLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60
           MEQDSEEEVKTFQSLGICEQLVEACESLGWK+PSKIQAEAIPHALEGKDLIGLAQTGSGK
Sbjct: 1   MEQDSEEEVKTFQSLGICEQLVEACESLGWKSPSKIQAEAIPHALEGKDLIGLAQTGSGK 60

Query: 61  TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120
           TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ
Sbjct: 61  TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120

Query: 121 QAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180
           QAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE
Sbjct: 121 QAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180

Query: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYL 240
           IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYL
Sbjct: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYL 240

Query: 241 VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC 300
           VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC
Sbjct: 241 VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC 300

Query: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSKFTANLSTISSIEELPKLKTHMLRLDGNWR 360
           NVLICTDVASRGLDIPSVDMVINYDIPSNSK                             
Sbjct: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSK----------------------------- 360

Query: 361 LANSRDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLL 420
                DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLL
Sbjct: 361 -----DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLL 420

Query: 421 ERVTEAKRISLMVKPYCVQKIHLSDPSLYTNKIKEAGGKKRRRGGDDDDDNDNNDVEKYL 480
           ERVTEAKRISLM                   KIKE GG+KRRR G+DDDDNDNNDVEKYL
Sbjct: 421 ERVTEAKRISLM-------------------KIKETGGRKRRR-GEDDDDNDNNDVEKYL 449

Query: 481 RLKTGKGGKMSKNGKTSKKLKRR 504
            LKTGK  KMS  GKTSKKLKR+
Sbjct: 481 GLKTGKRAKMSNIGKTSKKLKRK 449

[Close]

BLAST of Clc01G00790 vs. NCBI nr
Match: XP_022157139.1 (DEAD-box ATP-dependent RNA helicase 10-like [Momordica charantia] >XP_022157140.1 DEAD-box ATP-dependent RNA helicase 10-like [Momordica charantia])

HSP 1 Score: 793.5 bits (2048), Expect = 1.1e-225
Identity = 427/503 (84.89%), Postives = 438/503 (87.08%), Query Frame = 0


Query: 1   MEQDSEEEVKTFQSLGICEQLVEACESLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60
           MEQDS++EVKTF+SLGICEQLVEACESLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK
Sbjct: 1   MEQDSQDEVKTFKSLGICEQLVEACESLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60

Query: 61  TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120
           TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ
Sbjct: 61  TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120

Query: 121 QAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180
           QAINLAKRPHIVVGTPGRLVDHLTNTKGFSLR LKYLVLDEADRLLNEDFEKSIDEILNE
Sbjct: 121 QAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRILKYLVLDEADRLLNEDFEKSIDEILNE 180

Query: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYL 240
           IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQ+YCFIPAKYKECYL
Sbjct: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQKYCFIPAKYKECYL 240

Query: 241 VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC 300
           VYILTEMSG TSMVFTRTCDATRLLSL+LRNLGLRAIPISGQMTQAKRLGALNKFKAGEC
Sbjct: 241 VYILTEMSGCTSMVFTRTCDATRLLSLVLRNLGLRAIPISGQMTQAKRLGALNKFKAGEC 300

Query: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSKFTANLSTISSIEELPKLKTHMLRLDGNWR 360
           NVLICTDVASRGLDIPSVDMVINYDIPSNSK                             
Sbjct: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSK----------------------------- 360

Query: 361 LANSRDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLL 420
                DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLL
Sbjct: 361 -----DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLL 420

Query: 421 ERVTEAKRISLMVKPYCVQKIHLSDPSLYTNKIKEAGGKKRRRGGDDDDDNDNNDVEKYL 480
           ERVTEAKRISLM                   K+KE GGKKRRRGG D+DD + + VE YL
Sbjct: 421 ERVTEAKRISLM-------------------KVKETGGKKRRRGGGDNDDYNEDHVENYL 450

Query: 481 RLKTGKGGKMSKNGKTSKKLKRR 504
           RLKTGK GKM +NGK SKK KR+
Sbjct: 481 RLKTGKNGKMFQNGKMSKKSKRK 450

[Close]

BLAST of Clc01G00790 vs. NCBI nr
Match: XP_023550704.1 (DEAD-box ATP-dependent RNA helicase 10-like [Cucurbita pepo subsp. pepo] >XP_023550705.1 DEAD-box ATP-dependent RNA helicase 10-like [Cucurbita pepo subsp. pepo] >XP_023550706.1 DEAD-box ATP-dependent RNA helicase 10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 791.6 bits (2043), Expect = 4.0e-225
Identity = 427/504 (84.72%), Postives = 441/504 (87.50%), Query Frame = 0


Query: 1   MEQDSEEEVKTFQSLGICEQLVEACESLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60
           M+QD EEEVKTFQSLGICEQLVEACESLGWKNPSKIQ EAIPHALEGKDLIGLAQTGSGK
Sbjct: 1   MDQDYEEEVKTFQSLGICEQLVEACESLGWKNPSKIQVEAIPHALEGKDLIGLAQTGSGK 60

Query: 61  TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120
           TGAFALPILQALL+APQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ
Sbjct: 61  TGAFALPILQALLDAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120

Query: 121 QAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180
           QAINLAKRPHIVVGTPGRLVDHL+NTKGFSLRTLKYLV DEADRLLNEDF+KSIDEILNE
Sbjct: 121 QAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVFDEADRLLNEDFQKSIDEILNE 180

Query: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYL 240
           IPRER+TYLFSATMTKKVRKLQRA LRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYL
Sbjct: 181 IPRERKTYLFSATMTKKVRKLQRASLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYL 240

Query: 241 VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC 300
           VYILTEMSGSTSMVFTRTCDATRLL+L+LRNLGLRAIPISGQMTQAKRLGALNKFKAGEC
Sbjct: 241 VYILTEMSGSTSMVFTRTCDATRLLALVLRNLGLRAIPISGQMTQAKRLGALNKFKAGEC 300

Query: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSKFTANLSTISSIEELPKLKTHMLRLDGNWR 360
           NVLICTDVASRGLDIPSVDMVINYDIPSNSK                             
Sbjct: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSK----------------------------- 360

Query: 361 LANSRDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLL 420
                DYIHRVGRTARAGRSGVAISLVNQYELEWY+QIEKLIGKKLPQFSAQEEEVLMLL
Sbjct: 361 -----DYIHRVGRTARAGRSGVAISLVNQYELEWYMQIEKLIGKKLPQFSAQEEEVLMLL 420

Query: 421 ERVTEAKRISLMVKPYCVQKIHLSDPSLYTNKIKEAGGKKRRRGGDD-DDDNDNNDVEKY 480
           ERV EAKRIS+M                   KIKE GGKKRRRGGDD DDD++NNDVEKY
Sbjct: 421 ERVAEAKRISIM-------------------KIKETGGKKRRRGGDDNDDDDNNNDVEKY 448

Query: 481 LRLKTGKGGKMSKNGKTSKKLKRR 504
           +RLKT   GKMSKNGKTSKK+KR+
Sbjct: 481 MRLKT---GKMSKNGKTSKKMKRK 448

[Close]

BLAST of Clc01G00790 vs. ExPASy Swiss-Prot
Match: Q8GY84 (DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis thaliana OX=3702 GN=RH10 PE=1 SV=2)

HSP 1 Score: 624.4 bits (1609), Expect = 1.1e-177
Identity = 340/515 (66.02%), Postives = 397/515 (77.09%), Query Frame = 0


Query: 3   QDSEEEVKTFQSLGICEQLVEACESLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 62
           ++  E VKTF  LG+ E+LV+ACE LGWKNPSKIQAEA+P ALEGKD+IGLAQTGSGKTG
Sbjct: 2   EEENEVVKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTG 61

Query: 63  AFALPILQALLE------------APQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCA 122
           AFA+PILQALLE               AFFACVLSPTRELAIQIAEQFEALG+ I ++CA
Sbjct: 62  AFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCA 121

Query: 123 VLVGGVDMVQQAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDF 182
           VLVGG+D +QQ I L KRPH++V TPGRL DH+++TKGFSL++LKYLVLDEADRLLNEDF
Sbjct: 122 VLVGGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDF 181

Query: 183 EKSIDEILNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCF 242
           EKS+++IL EIP ER+T+LFSATMTKKVRKLQRACLRNPVKIEAA+KYSTVDTLKQQY F
Sbjct: 182 EKSLNQILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYRF 241

Query: 243 IPAKYKECYLVYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLG 302
           + AKYK+CYLVYIL+EM  STSM+FTRTCD TR L+L+LR+LG RAIPISGQMTQ+KRLG
Sbjct: 242 VAAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLG 301

Query: 303 ALNKFKAGECNVLICTDVASRGLDIPSVDMVINYDIPSNSKFTANLSTISSIEELPKLKT 362
           ALNKFKAGECN+L+CTDVASRGLDIPSVD+VINYDIP+NSK                   
Sbjct: 302 ALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSK------------------- 361

Query: 363 HMLRLDGNWRLANSRDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFS 422
                          DYIHRVGRTARAGRSGV ISLVNQYELEWYIQIEKLIGKKLP++ 
Sbjct: 362 ---------------DYIHRVGRTARAGRSGVGISLVNQYELEWYIQIEKLIGKKLPEYP 421

Query: 423 AQEEEVLMLLERVTEAKRISLMVKPYCVQKIHLSDPSLYTNKIKEAGGKKRRRGGDDDDD 482
           A+E+EVL LLERV EAK++S M                    +KE+GG+KRR  G+DD++
Sbjct: 422 AEEDEVLSLLERVAEAKKLSAM-------------------NMKESGGRKRR--GEDDEE 456

Query: 483 NDNNDVEKYLRLKTGKGGKM---SKNGKTSKKLKR 503
           +     E++L     +G K    +K+ K+SKK KR
Sbjct: 482 S-----ERFLGGNKDRGNKERGGNKDKKSSKKFKR 456

[Close]

BLAST of Clc01G00790 vs. ExPASy Swiss-Prot
Match: A2XKG2 (DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa subsp. indica OX=39946 GN=RH10 PE=1 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 1.9e-153
Identity = 292/509 (57.37%), Postives = 365/509 (71.71%), Query Frame = 0


Query: 2   EQDSEEEVK---TFQSLGICEQLVEACESLGWKNPSKIQAEAIPHALEGKDLIGLAQTGS 61
           EQ++E   +   TF  LG+  +LV AC+++GWK P++IQAEAIPHALEG+DLIGL QTGS
Sbjct: 30  EQEAEPPARRPSTFAELGVVPELVAACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGS 89

Query: 62  GKTGAFALPILQALL--EAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGV 121
           GKTGAFALPI+QALL  + PQA FACVLSPTRELA QI +QFEALGS IG+ C VLVGGV
Sbjct: 90  GKTGAFALPIIQALLKQDKPQALFACVLSPTRELAFQIGQQFEALGSAIGLSCTVLVGGV 149

Query: 122 DMVQQAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDE 181
           D VQQA++LAKRPHIVVGTPGRL+DHLT+TKGFSL  LKYLVLDEAD+LLN +F+K++D+
Sbjct: 150 DRVQQAVSLAKRPHIVVGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKLLNVEFQKALDD 209

Query: 182 ILNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYK 241
           ILN IP+ERRT+LFSATMT KV KLQRACLRNPVK+E A+KYSTVDTL+Q++ F+PA YK
Sbjct: 210 ILNVIPKERRTFLFSATMTNKVSKLQRACLRNPVKVEVASKYSTVDTLRQEFYFVPADYK 269

Query: 242 ECYLVYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFK 301
           +C+LV++L E+ GS  M+F RTC++TRLL+L LRNL  +AI ISGQM+Q KRLGALN+FK
Sbjct: 270 DCFLVHVLNELPGSMIMIFVRTCESTRLLALTLRNLRFKAISISGQMSQDKRLGALNRFK 329

Query: 302 AGECNVLICTDVASRGLDIPSVDMVINYDIPSNSKFTANLSTISSIEELPKLKTHMLRLD 361
             +CN+LICTDVASRGLDI  VD+VINYDIP NSK                         
Sbjct: 330 TKDCNILICTDVASRGLDIQGVDVVINYDIPMNSK------------------------- 389

Query: 362 GNWRLANSRDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEV 421
                    DY+HRVGRTARAG +G A+SLVNQYE  W+  IEKL+G ++P       E+
Sbjct: 390 ---------DYVHRVGRTARAGNTGYAVSLVNQYEAMWFKMIEKLLGYEIPDRKVDNAEI 449

Query: 422 LMLLERVTEAKRISLMVKPYCVQKIHLSDPSLYTNKIKEAGG--KKRRRGGDDDDDNDNN 481
           ++L ER++++KRI+L                     +KE GG  KKRR+  DD+++ + N
Sbjct: 450 MILRERISDSKRIAL-------------------TTMKEGGGHKKKRRKNEDDEEEEERN 472

Query: 482 DVEKYLRLKTGKGGKMSKNGKTSKKLKRR 504
                          +S+  K+  K +RR
Sbjct: 510 -------------APVSRKSKSFNKSRRR 472

[Close]

BLAST of Clc01G00790 vs. ExPASy Swiss-Prot
Match: Q7Y183 (DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa subsp. japonica OX=39947 GN=RH10 PE=2 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 1.9e-153
Identity = 292/509 (57.37%), Postives = 365/509 (71.71%), Query Frame = 0


Query: 2   EQDSEEEVK---TFQSLGICEQLVEACESLGWKNPSKIQAEAIPHALEGKDLIGLAQTGS 61
           EQ++E   +   TF  LG+  +LV AC+++GWK P++IQAEAIPHALEG+DLIGL QTGS
Sbjct: 30  EQEAEPPARRPSTFAELGVVPELVAACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGS 89

Query: 62  GKTGAFALPILQALL--EAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGV 121
           GKTGAFALPI+QALL  + PQA FACVLSPTRELA QI +QFEALGS IG+ C VLVGGV
Sbjct: 90  GKTGAFALPIIQALLKQDKPQALFACVLSPTRELAFQIGQQFEALGSAIGLSCTVLVGGV 149

Query: 122 DMVQQAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDE 181
           D VQQA++LAKRPHIVVGTPGRL+DHLT+TKGFSL  LKYLVLDEAD+LLN +F+K++D+
Sbjct: 150 DRVQQAVSLAKRPHIVVGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKLLNVEFQKALDD 209

Query: 182 ILNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYK 241
           ILN IP+ERRT+LFSATMT KV KLQRACLRNPVK+E A+KYSTVDTL+Q++ F+PA YK
Sbjct: 210 ILNVIPKERRTFLFSATMTNKVSKLQRACLRNPVKVEVASKYSTVDTLRQEFYFVPADYK 269

Query: 242 ECYLVYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFK 301
           +C+LV++L E+ GS  M+F RTC++TRLL+L LRNL  +AI ISGQM+Q KRLGALN+FK
Sbjct: 270 DCFLVHVLNELPGSMIMIFVRTCESTRLLALTLRNLRFKAISISGQMSQDKRLGALNRFK 329

Query: 302 AGECNVLICTDVASRGLDIPSVDMVINYDIPSNSKFTANLSTISSIEELPKLKTHMLRLD 361
             +CN+LICTDVASRGLDI  VD+VINYDIP NSK                         
Sbjct: 330 TKDCNILICTDVASRGLDIQGVDVVINYDIPMNSK------------------------- 389

Query: 362 GNWRLANSRDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEV 421
                    DY+HRVGRTARAG +G A+SLVNQYE  W+  IEKL+G ++P       E+
Sbjct: 390 ---------DYVHRVGRTARAGNTGYAVSLVNQYEAMWFKMIEKLLGYEIPDRKVDNAEI 449

Query: 422 LMLLERVTEAKRISLMVKPYCVQKIHLSDPSLYTNKIKEAGG--KKRRRGGDDDDDNDNN 481
           ++L ER++++KRI+L                     +KE GG  KKRR+  DD+++ + N
Sbjct: 450 MILRERISDSKRIAL-------------------TTMKEGGGHKKKRRKNEDDEEEEERN 472

Query: 482 DVEKYLRLKTGKGGKMSKNGKTSKKLKRR 504
                          +S+  K+  K +RR
Sbjct: 510 -------------APVSRKSKSFNKSRRR 472

[Close]

BLAST of Clc01G00790 vs. ExPASy Swiss-Prot
Match: Q9CWX9 (Probable ATP-dependent RNA helicase DDX47 OS=Mus musculus OX=10090 GN=Ddx47 PE=2 SV=2)

HSP 1 Score: 515.0 bits (1325), Expect = 9.6e-145
Identity = 276/487 (56.67%), Postives = 351/487 (72.07%), Query Frame = 0


Query: 6   EEEVKTFQSLGICEQLVEACESLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 65
           EEE KTF+ LG+ + L EAC+ LGW  P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAFA
Sbjct: 20  EEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79

Query: 66  LPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQQAINL 125
           LPIL ALLE PQ  FA VL+PTRELA QI+EQFEALGS IG++CAV+VGG+D + Q++ L
Sbjct: 80  LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLAL 139

Query: 126 AKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNEIPRER 185
           AK+PHIV+ TPGRL+DHL NTKGF+LR LKYLV+DEADR+LN DFE  +D+IL  IPR+R
Sbjct: 140 AKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDR 199

Query: 186 RTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYLVYILT 245
           +T+LFSATMTKKV+KLQRA L+NPVK   ++KY TV+ L+Q Y FIP+K+K+ YLVYIL 
Sbjct: 200 KTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDTYLVYILN 259

Query: 246 EMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGECNVLIC 305
           E++G++ M+F  TC+ T+  +L+LRNLG  AIP+ GQM+Q+KRLG+LNKFKA   ++L+ 
Sbjct: 260 ELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLA 319

Query: 306 TDVASRGLDIPSVDMVINYDIPSNSKFTANLSTISSIEELPKLKTHMLRLDGNWRLANSR 365
           TDVASRGLDIP VD+V+N+DIP++SK                                  
Sbjct: 320 TDVASRGLDIPHVDVVVNFDIPTHSK---------------------------------- 379

Query: 366 DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLLERVTE 425
           DYIHRVGRTARAGRSG AI+ V QY++E + +IE LIGKKLP F  Q+EEV+ML ERV E
Sbjct: 380 DYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDEEVMMLTERVNE 439

Query: 426 AKRISLMVKPYCVQKIHLSDPSLYTNKIKEAGGKKRRRGGDDDDDNDNNDVEKYLRLKTG 485
           A+R + M                   +++E G KK+R+  D  DD+D       +R K  
Sbjct: 440 AQRFARM-------------------ELREHGEKKKRKREDAGDDDDKEGAIG-VRNKVA 451

Query: 486 KGGKMSK 493
            GGKM K
Sbjct: 500 -GGKMKK 451

[Close]

BLAST of Clc01G00790 vs. ExPASy Swiss-Prot
Match: Q29S22 (Probable ATP-dependent RNA helicase DDX47 OS=Bos taurus OX=9913 GN=DDX47 PE=2 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 1.6e-144
Identity = 274/487 (56.26%), Postives = 352/487 (72.28%), Query Frame = 0


Query: 7   EEVKTFQSLGICEQLVEACESLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFAL 66
           EE KTF+ LG+ + L EAC+ LGW  P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAFAL
Sbjct: 23  EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 82

Query: 67  PILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQQAINLA 126
           PIL ALLE PQ  FA VL+PTRELA QI+EQFEALGS IG++CAV+VGG+D + Q++ LA
Sbjct: 83  PILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALA 142

Query: 127 KRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNEIPRERR 186
           K+PHIV+ TPGRL+DHL NTKGF+LR LKYLV+DEADR+LN DFE  +D+IL  IPR+R+
Sbjct: 143 KKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK 202

Query: 187 TYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYLVYILTE 246
           T+LFSATMTKKV+KLQRA L+NPVK   ++KY TV+ L+Q Y FIP+K+K+ YLVYIL E
Sbjct: 203 TFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDTYLVYILNE 262

Query: 247 MSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGECNVLICT 306
           ++G++ M+F  TC+ T+  +L+LRNLG  AIP+ GQM+Q+KRLG+LNKFKA   ++L+ T
Sbjct: 263 LAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLAT 322

Query: 307 DVASRGLDIPSVDMVINYDIPSNSKFTANLSTISSIEELPKLKTHMLRLDGNWRLANSRD 366
           DVASRGLDIP VD+V+N+DIP++SK                                  D
Sbjct: 323 DVASRGLDIPHVDVVVNFDIPTHSK----------------------------------D 382

Query: 367 YIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLLERVTEA 426
           YIHRVGRTARAGRSG AI+ V QY++E + +IE LIGKKLP F  Q++EV+ML ERVTEA
Sbjct: 383 YIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEA 442

Query: 427 KRISLMVKPYCVQKIHLSDPSLYTNKIKEAGGKKRRRGGDDDDDNDNNDVEKYLRLKTG- 486
           +R + M                   +++E G KK+R     +D  DN+D E  + ++   
Sbjct: 443 QRFARM-------------------ELREHGEKKKR---SREDVGDNDDTEGAIGVRNKV 453

Query: 487 KGGKMSK 493
            GGKM K
Sbjct: 503 AGGKMKK 453

[Close]

BLAST of Clc01G00790 vs. ExPASy TrEMBL
Match: A0A5D3C6L0 (DEAD-box ATP-dependent RNA helicase 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00720 PE=3 SV=1)

HSP 1 Score: 821.6 bits (2121), Expect = 1.8e-234
Identity = 442/503 (87.87%), Postives = 448/503 (89.07%), Query Frame = 0


Query: 1   MEQDSEEEVKTFQSLGICEQLVEACESLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60
           MEQD+EEEVKTFQSLGICEQLVEAC+SLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK
Sbjct: 1   MEQDNEEEVKTFQSLGICEQLVEACDSLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60

Query: 61  TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120
           TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ
Sbjct: 61  TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120

Query: 121 QAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180
           QAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE
Sbjct: 121 QAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180

Query: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYL 240
           IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYL
Sbjct: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYL 240

Query: 241 VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC 300
           VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC
Sbjct: 241 VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC 300

Query: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSKFTANLSTISSIEELPKLKTHMLRLDGNWR 360
           N+LICTDVASRGLDIPSVDMVINYDIPSNSK                             
Sbjct: 301 NILICTDVASRGLDIPSVDMVINYDIPSNSK----------------------------- 360

Query: 361 LANSRDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLL 420
                DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLL
Sbjct: 361 -----DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLL 420

Query: 421 ERVTEAKRISLMVKPYCVQKIHLSDPSLYTNKIKEAGGKKRRRGGDDDDDNDNNDVEKYL 480
           ERVTEAKRISLM                   KIKE GGKKRRRGGDD+DDNDNNDVEKYL
Sbjct: 421 ERVTEAKRISLM-------------------KIKETGGKKRRRGGDDEDDNDNNDVEKYL 449

Query: 481 RLKTGKGGKMSKNGKTSKKLKRR 504
           R KTGKGGKMSKNGKTSKK+KR+
Sbjct: 481 R-KTGKGGKMSKNGKTSKKMKRK 449

[Close]

BLAST of Clc01G00790 vs. ExPASy TrEMBL
Match: A0A1S3AUW6 (DEAD-box ATP-dependent RNA helicase 10 OS=Cucumis melo OX=3656 GN=LOC103482938 PE=3 SV=1)

HSP 1 Score: 821.6 bits (2121), Expect = 1.8e-234
Identity = 442/503 (87.87%), Postives = 448/503 (89.07%), Query Frame = 0


Query: 1   MEQDSEEEVKTFQSLGICEQLVEACESLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60
           MEQD+EEEVKTFQSLGICEQLVEAC+SLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK
Sbjct: 1   MEQDNEEEVKTFQSLGICEQLVEACDSLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60

Query: 61  TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120
           TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ
Sbjct: 61  TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120

Query: 121 QAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180
           QAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE
Sbjct: 121 QAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180

Query: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYL 240
           IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYL
Sbjct: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYL 240

Query: 241 VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC 300
           VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC
Sbjct: 241 VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC 300

Query: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSKFTANLSTISSIEELPKLKTHMLRLDGNWR 360
           N+LICTDVASRGLDIPSVDMVINYDIPSNSK                             
Sbjct: 301 NILICTDVASRGLDIPSVDMVINYDIPSNSK----------------------------- 360

Query: 361 LANSRDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLL 420
                DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLL
Sbjct: 361 -----DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLL 420

Query: 421 ERVTEAKRISLMVKPYCVQKIHLSDPSLYTNKIKEAGGKKRRRGGDDDDDNDNNDVEKYL 480
           ERVTEAKRISLM                   KIKE GGKKRRRGGDD+DDNDNNDVEKYL
Sbjct: 421 ERVTEAKRISLM-------------------KIKETGGKKRRRGGDDEDDNDNNDVEKYL 449

Query: 481 RLKTGKGGKMSKNGKTSKKLKRR 504
           R KTGKGGKMSKNGKTSKK+KR+
Sbjct: 481 R-KTGKGGKMSKNGKTSKKMKRK 449

[Close]

BLAST of Clc01G00790 vs. ExPASy TrEMBL
Match: A0A0A0KM04 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139720 PE=3 SV=1)

HSP 1 Score: 819.7 bits (2116), Expect = 6.7e-234
Identity = 440/503 (87.48%), Postives = 447/503 (88.87%), Query Frame = 0


Query: 1   MEQDSEEEVKTFQSLGICEQLVEACESLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60
           MEQD+ EEVKTFQSLGICEQLVEAC+SLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK
Sbjct: 1   MEQDN-EEVKTFQSLGICEQLVEACDSLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60

Query: 61  TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120
           TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ
Sbjct: 61  TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120

Query: 121 QAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180
           QAINLAKRPH+VVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE
Sbjct: 121 QAINLAKRPHVVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180

Query: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYL 240
           IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYL
Sbjct: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYL 240

Query: 241 VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC 300
           VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC
Sbjct: 241 VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC 300

Query: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSKFTANLSTISSIEELPKLKTHMLRLDGNWR 360
           N+LICTDVASRGLDIPSVDMVINYDIPSNSK                             
Sbjct: 301 NILICTDVASRGLDIPSVDMVINYDIPSNSK----------------------------- 360

Query: 361 LANSRDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLL 420
                DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLL
Sbjct: 361 -----DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLL 420

Query: 421 ERVTEAKRISLMVKPYCVQKIHLSDPSLYTNKIKEAGGKKRRRGGDDDDDNDNNDVEKYL 480
           ERV EAKRISLM                   KIKE GG+KRRRGGDDDDDN+NNDVEKYL
Sbjct: 421 ERVAEAKRISLM-------------------KIKETGGRKRRRGGDDDDDNENNDVEKYL 449

Query: 481 RLKTGKGGKMSKNGKTSKKLKRR 504
           RLKTGKGGKMSKNGKTSKK+KRR
Sbjct: 481 RLKTGKGGKMSKNGKTSKKMKRR 449

[Close]

BLAST of Clc01G00790 vs. ExPASy TrEMBL
Match: A0A6J1DVN1 (DEAD-box ATP-dependent RNA helicase 10-like OS=Momordica charantia OX=3673 GN=LOC111023933 PE=3 SV=1)

HSP 1 Score: 793.5 bits (2048), Expect = 5.2e-226
Identity = 427/503 (84.89%), Postives = 438/503 (87.08%), Query Frame = 0


Query: 1   MEQDSEEEVKTFQSLGICEQLVEACESLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60
           MEQDS++EVKTF+SLGICEQLVEACESLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK
Sbjct: 1   MEQDSQDEVKTFKSLGICEQLVEACESLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60

Query: 61  TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120
           TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ
Sbjct: 61  TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120

Query: 121 QAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180
           QAINLAKRPHIVVGTPGRLVDHLTNTKGFSLR LKYLVLDEADRLLNEDFEKSIDEILNE
Sbjct: 121 QAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRILKYLVLDEADRLLNEDFEKSIDEILNE 180

Query: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYL 240
           IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQ+YCFIPAKYKECYL
Sbjct: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQKYCFIPAKYKECYL 240

Query: 241 VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC 300
           VYILTEMSG TSMVFTRTCDATRLLSL+LRNLGLRAIPISGQMTQAKRLGALNKFKAGEC
Sbjct: 241 VYILTEMSGCTSMVFTRTCDATRLLSLVLRNLGLRAIPISGQMTQAKRLGALNKFKAGEC 300

Query: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSKFTANLSTISSIEELPKLKTHMLRLDGNWR 360
           NVLICTDVASRGLDIPSVDMVINYDIPSNSK                             
Sbjct: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSK----------------------------- 360

Query: 361 LANSRDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLL 420
                DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLL
Sbjct: 361 -----DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLL 420

Query: 421 ERVTEAKRISLMVKPYCVQKIHLSDPSLYTNKIKEAGGKKRRRGGDDDDDNDNNDVEKYL 480
           ERVTEAKRISLM                   K+KE GGKKRRRGG D+DD + + VE YL
Sbjct: 421 ERVTEAKRISLM-------------------KVKETGGKKRRRGGGDNDDYNEDHVENYL 450

Query: 481 RLKTGKGGKMSKNGKTSKKLKRR 504
           RLKTGK GKM +NGK SKK KR+
Sbjct: 481 RLKTGKNGKMFQNGKMSKKSKRK 450

[Close]

BLAST of Clc01G00790 vs. ExPASy TrEMBL
Match: A0A6J1K797 (DEAD-box ATP-dependent RNA helicase 10-like OS=Cucurbita maxima OX=3661 GN=LOC111490827 PE=3 SV=1)

HSP 1 Score: 789.3 bits (2037), Expect = 9.7e-225
Identity = 424/499 (84.97%), Postives = 438/499 (87.78%), Query Frame = 0


Query: 1   MEQDSEEEVKTFQSLGICEQLVEACESLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60
           MEQD+EEEVKTF+ LGICEQLVEAC+SLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK
Sbjct: 1   MEQDNEEEVKTFKDLGICEQLVEACDSLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60

Query: 61  TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120
           TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ
Sbjct: 61  TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120

Query: 121 QAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180
           QAINLAKRPHIVVGTPGRLVDHL+NTKGFSLRTLKYLVLDEADRLLNEDF+KSIDEIL+E
Sbjct: 121 QAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFQKSIDEILDE 180

Query: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYL 240
           IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAA+KYSTVDTLKQ+YCFIPAKYKECYL
Sbjct: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQEYCFIPAKYKECYL 240

Query: 241 VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC 300
           VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC
Sbjct: 241 VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC 300

Query: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSKFTANLSTISSIEELPKLKTHMLRLDGNWR 360
           NVLICTDVASRGLDIPSVDMVINYDIPSNSK                             
Sbjct: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSK----------------------------- 360

Query: 361 LANSRDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLL 420
                DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLML 
Sbjct: 361 -----DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLF 420

Query: 421 ERVTEAKRISLMVKPYCVQKIHLSDPSLYTNKIKEAGGKKRRRGGDDDDDNDNNDVEKYL 480
           +RV EAKRIS+M                   KIKE+GGKKRRRGG DDDDND+NDVEKYL
Sbjct: 421 DRVAEAKRISIM-------------------KIKESGGKKRRRGGGDDDDNDDNDVEKYL 444

Query: 481 RLKTGKGGKMSKNGKTSKK 500
           RLK+GK GKMSK  K +KK
Sbjct: 481 RLKSGKNGKMSK--KFNKK 444

[Close]

BLAST of Clc01G00790 vs. TAIR 10
Match: AT5G60990.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 624.4 bits (1609), Expect = 8.0e-179
Identity = 340/515 (66.02%), Postives = 397/515 (77.09%), Query Frame = 0


Query: 3   QDSEEEVKTFQSLGICEQLVEACESLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 62
           ++  E VKTF  LG+ E+LV+ACE LGWKNPSKIQAEA+P ALEGKD+IGLAQTGSGKTG
Sbjct: 2   EEENEVVKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTG 61

Query: 63  AFALPILQALLE------------APQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCA 122
           AFA+PILQALLE               AFFACVLSPTRELAIQIAEQFEALG+ I ++CA
Sbjct: 62  AFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCA 121

Query: 123 VLVGGVDMVQQAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDF 182
           VLVGG+D +QQ I L KRPH++V TPGRL DH+++TKGFSL++LKYLVLDEADRLLNEDF
Sbjct: 122 VLVGGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDF 181

Query: 183 EKSIDEILNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCF 242
           EKS+++IL EIP ER+T+LFSATMTKKVRKLQRACLRNPVKIEAA+KYSTVDTLKQQY F
Sbjct: 182 EKSLNQILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYRF 241

Query: 243 IPAKYKECYLVYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLG 302
           + AKYK+CYLVYIL+EM  STSM+FTRTCD TR L+L+LR+LG RAIPISGQMTQ+KRLG
Sbjct: 242 VAAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLG 301

Query: 303 ALNKFKAGECNVLICTDVASRGLDIPSVDMVINYDIPSNSKFTANLSTISSIEELPKLKT 362
           ALNKFKAGECN+L+CTDVASRGLDIPSVD+VINYDIP+NSK                   
Sbjct: 302 ALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSK------------------- 361

Query: 363 HMLRLDGNWRLANSRDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFS 422
                          DYIHRVGRTARAGRSGV ISLVNQYELEWYIQIEKLIGKKLP++ 
Sbjct: 362 ---------------DYIHRVGRTARAGRSGVGISLVNQYELEWYIQIEKLIGKKLPEYP 421

Query: 423 AQEEEVLMLLERVTEAKRISLMVKPYCVQKIHLSDPSLYTNKIKEAGGKKRRRGGDDDDD 482
           A+E+EVL LLERV EAK++S M                    +KE+GG+KRR  G+DD++
Sbjct: 422 AEEDEVLSLLERVAEAKKLSAM-------------------NMKESGGRKRR--GEDDEE 456

Query: 483 NDNNDVEKYLRLKTGKGGKM---SKNGKTSKKLKR 503
           +     E++L     +G K    +K+ K+SKK KR
Sbjct: 482 S-----ERFLGGNKDRGNKERGGNKDKKSSKKFKR 456

[Close]

BLAST of Clc01G00790 vs. TAIR 10
Match: AT1G16280.1 (RNA helicase 36 )

HSP 1 Score: 322.8 bits (826), Expect = 5.0e-88
Identity = 181/426 (42.49%), Postives = 261/426 (61.27%), Query Frame = 0


Query: 12  FQSLGICEQLVEACESLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 71
           F+ LG+ E  VE C+ LG + P+ +Q   +P  L G+D++GLAQTGSGKT AFALPIL  
Sbjct: 60  FEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHR 119

Query: 72  LLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQQAINLAKRPHI 131
           L E P   FA V++PTRELA Q+AEQF+ALGS + ++C+V+VGG+DM+ Q ++L  RPHI
Sbjct: 120 LAEDPYGVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHI 179

Query: 132 VVGTPGRLVDHLTNTKGFS--LRTLKYLVLDEADRLLNEDFEKSIDEILNEIPRERRTYL 191
           V+ TPGR+   L N           K+LVLDEADR+L+  F+  +  I   +P+ R+T L
Sbjct: 180 VITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPKSRQTLL 239

Query: 192 FSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYLVYILTEMSG 251
           FSATMT  ++ L           EA     TVDTL QQ+ F     KE YLV+IL++M  
Sbjct: 240 FSATMTSNLQALLEHSSNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHILSQMED 299

Query: 252 S---TSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGECNVLICT 311
               ++M+F  TC   + LSL+L  L +  I +    +Q+ RL AL+KFK+G+  +L+ T
Sbjct: 300 KGIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKVPILLAT 359

Query: 312 DVASRGLDIPSVDMVINYDIPSNSKFTANLSTISSIEELPKLKTHMLRLDGNWRLANSRD 371
           DVASRGLDIP+VD+VINYDIP                                   + RD
Sbjct: 360 DVASRGLDIPTVDLVINYDIP----------------------------------RDPRD 419

Query: 372 YIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLLERVTEA 431
           Y+HRVGRTARAGR G+A+S++ + +++   +IE+ +GKK+  ++ +     + + +V++A
Sbjct: 420 YVHRVGRTARAGRGGLAVSIITETDVKLIHKIEEEVGKKMEPYNKKVITDSLEVTKVSKA 451

Query: 432 KRISLM 433
           KR+++M
Sbjct: 480 KRVAMM 451

[Close]

BLAST of Clc01G00790 vs. TAIR 10
Match: AT4G16630.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 252.7 bits (644), Expect = 6.3e-67
Identity = 160/421 (38.00%), Postives = 223/421 (52.97%), Query Frame = 0


Query: 11  TFQSLGICEQLVEACESLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 70
           TF  L +   L+ ACE+LG+K P+ IQA  IP AL G+DL   A TGSGKT AFALP L+
Sbjct: 168 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227

Query: 71  ALLEAPQAFFA---CVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQQAINLAK 130
            LL  P+  FA    +L+PTRELA+QI    + L     IKC ++VGG+ + +Q + L  
Sbjct: 228 RLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRS 287

Query: 131 RPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNEIPRERRT 190
            P IVV TPGR++DHL N+    L  L  L+LDEADRLL   F   I E++   P+ R+T
Sbjct: 288 MPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQT 347

Query: 191 YLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFI---PAKYKECYLVYIL 250
            LFSATMT++V++L +  L  P+++ A         L ++   I       +E  L+ + 
Sbjct: 348 MLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLSLC 407

Query: 251 TEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGECNVLI 310
           T    S  ++F+ T  A   L ++    GL+A  + G +TQA+RL +L  F+  E + LI
Sbjct: 408 TRTFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDFLI 467

Query: 311 CTDVASRGLDIPSVDMVINYDIPSNSKFTANLSTISSIEELPKLKTHMLRLDGNWRLANS 370
            TDVA+RGLDI  V  VINY  P                           +D        
Sbjct: 468 ATDVAARGLDIIGVQTVINYACPR-------------------------EID-------- 527

Query: 371 RDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLLERVT 426
             Y+HRVGRTARAGR G A++ V   +      I K +G KL      E+ ++   + + 
Sbjct: 528 -SYVHRVGRTARAGREGYAVTFVTDSDRSLLKVIAKKVGSKLKSRVIPEQSIVKWSQIID 554

[Close]

BLAST of Clc01G00790 vs. TAIR 10
Match: AT5G65900.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 227.6 bits (579), Expect = 2.2e-59
Identity = 151/427 (35.36%), Postives = 226/427 (52.93%), Query Frame = 0


Query: 1   MEQDSEEEVKTFQSLGICEQLVEACESLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60
           +E+ S    KTF+SL + +   ++ + +G+   ++IQA+AIP  + G+D++G A+TGSGK
Sbjct: 145 LEETSIMTNKTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGK 204

Query: 61  TGAFALPILQALLEAP----QAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGV 120
           T AF +P ++ L              V+ PTRELAIQ     + L          ++GG 
Sbjct: 205 TLAFLIPAVELLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGE 264

Query: 121 DMVQQAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDE 180
               +A  LAK  +++V TPGRL+DHL NT GF  + LK+LV+DEADR+L ++FE+ + +
Sbjct: 265 KRKTEAEILAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKK 324

Query: 181 ILNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEA--ATKYSTVDTLKQQYCFIPAK 240
           ILN +P+ R+T LFSAT + KV  L R  L +PV I+     K  T + L+Q YC +P+ 
Sbjct: 325 ILNLLPKTRQTSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSA 384

Query: 241 YKECYLVYILTEMSGSTS-MVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALN 300
            +  +L+  L    G    MVF  TC +T+  + + R +    + I G + Q KR     
Sbjct: 385 MRLLFLLTFLKRFQGKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGIDQNKRTPTFL 444

Query: 301 KFKAGECNVLICTDVASRGLDIPSVDMVINYDIPSNSKFTANLSTISSIEELPKLKTHML 360
           +F   E  +L+CT+VA+RGLD P VD ++ YD P                          
Sbjct: 445 QFIKAETGILLCTNVAARGLDFPHVDWIVQYDPPD------------------------- 504

Query: 361 RLDGNWRLANSRDYIHRVGRTARA-GRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQ 420
                    N  DYIHRVGRTAR  G  G A+ ++   EL++   I+ L   K+P    +
Sbjct: 505 ---------NPTDYIHRVGRTARGEGAKGKALLVLTPQELKF---IQYLKAAKIPVEEHE 534

[Close]

BLAST of Clc01G00790 vs. TAIR 10
Match: AT3G18600.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 224.6 bits (571), Expect = 1.8e-58
Identity = 151/421 (35.87%), Postives = 227/421 (53.92%), Query Frame = 0


Query: 11  TFQSLGICEQLVEACESLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 70
           TF SL + EQ   A + +G++  ++IQA +I   LEGKD++G A+TGSGKT AF +P ++
Sbjct: 90  TFDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVE 149

Query: 71  ALLE---APQ-AFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQQAINLA 130
            L +   +P+      V+ PTRELAIQ     E L        ++++GG +   +A  +A
Sbjct: 150 LLFKERFSPRNGTGVIVICPTRELAIQTKNVAEELLKHHSQTVSMVIGGNNRRSEAQRIA 209

Query: 131 KRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNEIPRERR 190
              ++V+ TPGRL+DHL NTK F  + LK LV+DEADR+L E+FE+ +++IL  +P+ R+
Sbjct: 210 SGSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKILPKTRQ 269

Query: 191 TYLFSATMTKKVRKLQRACLRNPVKIEA--ATKYSTVDTLKQQYCFIPAKYKECYLVYIL 250
           T LFSAT T KV+ L R  L +PV ++     +  T + L+Q YC +P+K +   L+  L
Sbjct: 270 TALFSATQTSKVKDLARVSLTSPVHVDVDDGRRKVTNEGLEQGYCVVPSKQRLILLISFL 329

Query: 251 TEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGECNVLI 310
            +      MVF  TC + +  + I++   +    I G M Q +R      F   +  +L+
Sbjct: 330 KKNLNKKIMVFFSTCKSVQFHTEIMKISDVDVSDIHGGMDQNRRTKTFFDFMKAKKGILL 389

Query: 311 CTDVASRGLDIPSVDMVINYDIPSNSKFTANLSTISSIEELPKLKTHMLRLDGNWRLANS 370
           CTDVA+RGLDIPSVD +I YD P                                     
Sbjct: 390 CTDVAARGLDIPSVDWIIQYDPPD----------------------------------KP 449

Query: 371 RDYIHRVGRTARA-GRSGVAISLVNQYELEW--YIQIEKLIGKKLPQFSAQEEEVLMLLE 423
            +YIHRVGRTAR  G  G A+ ++   EL++  Y++  K+  K+L     +   V   LE
Sbjct: 450 TEYIHRVGRTARGEGAKGKALLVLIPEELQFIRYLKAAKVPVKELEFNEKRLSNVQSALE 476

The following BLAST results are available for this feature:

BLAST of Clc01G00790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437560.1	3.6e-234	87.87	PREDICTED: DEAD-box ATP-dependent RNA helicase 10 [Cucumis melo] >KAA0042572.1 D...	[more]
XP_011654632.1	1.4e-233	87.48	DEAD-box ATP-dependent RNA helicase 10 [Cucumis sativus] >KGN49894.1 hypothetica...	[more]
XP_038876108.1	3.2e-230	87.28	DEAD-box ATP-dependent RNA helicase 10 [Benincasa hispida]	[more]
XP_022157139.1	1.1e-225	84.89	DEAD-box ATP-dependent RNA helicase 10-like [Momordica charantia] >XP_022157140....	[more]
XP_023550704.1	4.0e-225	84.72	DEAD-box ATP-dependent RNA helicase 10-like [Cucurbita pepo subsp. pepo] >XP_023...	[more]

BLAST of Clc01G00790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GY84	1.1e-177	66.02	DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis thaliana OX=3702 GN=RH10 P...	[more]
A2XKG2	1.9e-153	57.37	DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa subsp. indica OX=39946 GN...	[more]
Q7Y183	1.9e-153	57.37	DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9CWX9	9.6e-145	56.67	Probable ATP-dependent RNA helicase DDX47 OS=Mus musculus OX=10090 GN=Ddx47 PE=2...	[more]
Q29S22	1.6e-144	56.26	Probable ATP-dependent RNA helicase DDX47 OS=Bos taurus OX=9913 GN=DDX47 PE=2 SV...	[more]

BLAST of Clc01G00790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C6L0	1.8e-234	87.87	DEAD-box ATP-dependent RNA helicase 10 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3AUW6	1.8e-234	87.87	DEAD-box ATP-dependent RNA helicase 10 OS=Cucumis melo OX=3656 GN=LOC103482938 P...	[more]
A0A0A0KM04	6.7e-234	87.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139720 PE=3 SV=1	[more]
A0A6J1DVN1	5.2e-226	84.89	DEAD-box ATP-dependent RNA helicase 10-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1K797	9.7e-225	84.97	DEAD-box ATP-dependent RNA helicase 10-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of Clc01G00790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60990.1	8.0e-179	66.02	DEA(D/H)-box RNA helicase family protein	[more]
AT1G16280.1	5.0e-88	42.49	RNA helicase 36	[more]
AT4G16630.1	6.3e-67	38.00	DEA(D/H)-box RNA helicase family protein	[more]
AT5G65900.1	2.2e-59	35.36	DEA(D/H)-box RNA helicase family protein	[more]
AT3G18600.1	1.8e-58	35.87	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 29..227 e-value: 1.9E-58 score: 210.2
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 41..212 score: 32.345226
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 263..378 e-value: 1.2E-29 score: 114.5
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 239..378 e-value: 1.3E-27 score: 96.3
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 239..417 score: 19.461891
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 218..424 e-value: 1.5E-46 score: 159.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..215 e-value: 8.9E-80 score: 269.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 80..399
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 35..201 e-value: 1.7E-49 score: 168.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 459..484
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 454..503
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 362..433
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 5..331
None	No IPR available	PANTHER	PTHR24031:SF728	BNAC02G41920D PROTEIN	coord: 362..433 coord: 5..331
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 224..387 e-value: 3.32219E-52 score: 171.536
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 158..166
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 10..38 score: 10.393079
IPR044765	DDX47/Rrp3, DEAD-box helicase domain	CDD	cd17954	DEADc_DDX47	coord: 11..213 e-value: 3.96099E-147 score: 417.488

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G00790.2	Clc01G00790.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003724	RNA helicase activity