Cla97C11G214485 (gene) Watermelon (97103) v2.5

Overview
NameCla97C11G214485
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description30S ribosomal protein S8, chloroplastic
LocationCla97Chr11: 7827633 .. 7828586 (-)
RNA-Seq ExpressionCla97C11G214485
SyntenyCla97C11G214485
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATTTGATTCCATTGGACGGTACCAACGAAATCGAGTGCGAACTCCCATTTCATTTTTTATTGAATTAACCGATCAACTTGCTTTTCCATCGAACATTTATTTTGGATTTCAATAATTTTCGAAACAAAAAAATTTCGATTGTTGATTCATCGCCAGAGATGGCTTAGAACCAATAGTTCATTATCTAATGGATTTTTTCGTTCTAATACTCCATCCGAGAGTTATCAGTATTTATCAAATCTGTTCCTATCTAACGGAACACTATTGGATCAAATGACAAAGACATTGTCTTTTCGGATCCAGCGAAAGCAAAGGCAGCGAAGCTTCAAGGAAGCCCCTTTTGACTCGACAGTGGTGACAGAGAGCAAGCTACTTTATGGGAGTAAGTGGGAGAGGGTAGTTGGCAATGGATTGAACCCCTCAGTAGGAAGAGGTTGAGGAGGATAGAATAGGCTGTGATGCCAGAAGAAGGTCTTGAGAGATCCTTTGAATACGACCAGGGGGATAGAAGCCCACGGAGCGGTAGGCTAAGCCGGAAAGAGAGAGAGCAGCTGGTTCTATAACTAACATAATAACCTCTATTCGCAATGCTGACATGAATAGAAAAGGAATGGTTCGAATACCATCTACTAACATCACCGAAAACATTGTTAAAATACTTTTACGAGAAGGTTTTATTGAAAACGTACGGAAACATCGTGAAAGCAACAAGGATTTTTGGGTTTTAACCCTACGACATAGAAGAAATAGGAAAGGACCATATAAAACGATTTTAAATTTAAAACGGATCAGTCGACCTGGTCTCCGAATATATTCTAACTATCAACAAATTCCTAGAATTTTAGGCGGAATGGGCAATGTAATTCTTTCTACTTCTCGGGGTATAATGACAGACCGAGAAGCTCAACTACAGGGAATCGGCGGCGAAATTTTGTGTTATATATGGTAA

mRNA sequence

ATGGAATTTGATTCCATTGGACGGTACCAACGAAATCGAAGATGGCTTAGAACCAATAGTTCATTATCTAATGGATTTTTTCGTTCTAATACTCCATCCGAGAGTTATCAGTATTTATCAAATCTGTTCCTATCTAACGGAACACTATTGGATCAAATGACAAAGACATTGTCTTTTCGGATCCAGCGAAAGCAAAGGCAGCGAAGCTTCAAGGAAGCCCCTTTTGACTCGACAGTGGTGACAGAGAGCAAGCTACTTTATGGGAGTAAGTGGGAGAGGGCTAAGCCGGAAAGAGAGAGAGCAGCTGGTTCTATAACTAACATAATAACCTCTATTCGCAATGCTGACATGAATAGAAAAGGAATGGTTCGAATACCATCTACTAACATCACCGAAAACATTGTTAAAATACTTTTACGAGAAGGTTTTATTGAAAACGTACGGAAACATCGTGAAAGCAACAAGGATTTTTGGGTTTTAACCCTACGACATAGAAGAAATAGGAAAGGACCATATAAAACGATTTTAAATTTAAAACGGATCAGTCGACCTGGTCTCCGAATATATTCTAACTATCAACAAATTCCTAGAATTTTAGGCGGAATGGGCAATGTAATTCTTTCTACTTCTCGGGGTATAATGACAGACCGAGAAGCTCAACTACAGGGAATCGGCGGCGAAATTTTGTGTTATATATGGTAA

Coding sequence (CDS)

ATGGAATTTGATTCCATTGGACGGTACCAACGAAATCGAAGATGGCTTAGAACCAATAGTTCATTATCTAATGGATTTTTTCGTTCTAATACTCCATCCGAGAGTTATCAGTATTTATCAAATCTGTTCCTATCTAACGGAACACTATTGGATCAAATGACAAAGACATTGTCTTTTCGGATCCAGCGAAAGCAAAGGCAGCGAAGCTTCAAGGAAGCCCCTTTTGACTCGACAGTGGTGACAGAGAGCAAGCTACTTTATGGGAGTAAGTGGGAGAGGGCTAAGCCGGAAAGAGAGAGAGCAGCTGGTTCTATAACTAACATAATAACCTCTATTCGCAATGCTGACATGAATAGAAAAGGAATGGTTCGAATACCATCTACTAACATCACCGAAAACATTGTTAAAATACTTTTACGAGAAGGTTTTATTGAAAACGTACGGAAACATCGTGAAAGCAACAAGGATTTTTGGGTTTTAACCCTACGACATAGAAGAAATAGGAAAGGACCATATAAAACGATTTTAAATTTAAAACGGATCAGTCGACCTGGTCTCCGAATATATTCTAACTATCAACAAATTCCTAGAATTTTAGGCGGAATGGGCAATGTAATTCTTTCTACTTCTCGGGGTATAATGACAGACCGAGAAGCTCAACTACAGGGAATCGGCGGCGAAATTTTGTGTTATATATGGTAA

Protein sequence

MEFDSIGRYQRNRRWLRTNSSLSNGFFRSNTPSESYQYLSNLFLSNGTLLDQMTKTLSFRIQRKQRQRSFKEAPFDSTVVTESKLLYGSKWERAKPERERAAGSITNIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMGNVILSTSRGIMTDREAQLQGIGGEILCYIW
Homology
[Close]
BLAST of Cla97C11G214485 vs. NCBI nr
Match: YP_009326025.1 (ribosomal protein S8 [Citrullus lanatus] >YP_009348067.1 ribosomal protein S8 [Citrullus mucosospermus] >YP_009420830.1 ribosomal protein S8 [Citrullus colocynthis] >YP_009431678.1 ribosomal protein S8 [Citrullus rehmii] >YP_009456181.1 ribosomal protein S8 [Lagenaria siceraria] >YP_010131129.1 ribosomal protein S8 [Benincasa hispida] >APW82923.1 ribosomal protein S8 [Citrullus lanatus subsp. vulgaris] >QNM38566.1 ribosomal protein S8 [Lagenaria siceraria var. microcarpa] >QZL38717.1 ribosomal protein S8 [Citrullus ecirrhosus] >AHM88713.1 ribosomal protein S8 [Lagenaria siceraria] >AHM88772.1 ribosomal protein S8 [Lagenaria siceraria])

HSP 1 Score: 254.6 bits (649), Expect = 8.2e-64
Identity = 126/130 (96.92%), Postives = 128/130 (98.46%), Query Frame = 0 

Query: 104 SITNIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR 163
           +I NIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR
Sbjct: 5   TIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR 64

Query: 164 HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMGNVILSTSRGIMTDREAQLQG 223
           HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMG VILSTSRGIMTDREA+LQG
Sbjct: 65  HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMGIVILSTSRGIMTDREARLQG 124

Query: 224 IGGEILCYIW 234
           IGGEILCYIW
Sbjct: 125 IGGEILCYIW 134

[Close]
BLAST of Cla97C11G214485 vs. NCBI nr
Match: YP_009431592.1 (ribosomal protein S8 [Citrullus amarus] >APW82498.1 ribosomal protein S8 [Citrullus lanatus subsp. vulgaris] >APW82583.1 ribosomal protein S8 [Citrullus lanatus subsp. vulgaris] >ASY96178.1 ribosomal protein S8 [Citrullus amarus])

HSP 1 Score: 253.1 bits (645), Expect = 2.4e-63
Identity = 125/130 (96.15%), Postives = 128/130 (98.46%), Query Frame = 0 

Query: 104 SITNIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR 163
           +I NIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR
Sbjct: 5   TIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR 64

Query: 164 HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMGNVILSTSRGIMTDREAQLQG 223
           HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMG VILSTSRGI+TDREA+LQG
Sbjct: 65  HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMGIVILSTSRGIITDREARLQG 124

Query: 224 IGGEILCYIW 234
           IGGEILCYIW
Sbjct: 125 IGGEILCYIW 134

[Close]
BLAST of Cla97C11G214485 vs. NCBI nr
Match: YP_009525221.1 (ribosomal protein S8 [Hodgsonia macrocarpa] >YP_009560871.1 ribosomal protein S8 [Trichosanthes kirilowii] >YP_009674426.1 ribosomal protein S8 [Siraitia grosvenorii] >YP_009738237.1 ribosomal protein S8 [Siraitia siamensis] >YP_009751941.1 ribosomal protein S8 [Cyclanthera pedata] >YP_009752362.1 ribosomal protein S8 [Bryonia marmorata] >YP_009752447.1 ribosomal protein S8 [Trichosanthes tricuspidata] >YP_009753293.1 ribosomal protein S8 [Nothoalsomitra suberosa] >YP_009753655.1 ribosomal protein S8 [Trichosanthes wallichiana] >QIT04085.1 ribosomal protein S8 [Luffa aegyptiaca] >QKX48510.1 ribosomal protein S8 [Luffa acutangula] >AXR94584.1 ribosomal protein S8 [Hodgsonia macrocarpa] >AXR94670.1 ribosomal protein S8 [Hodgsonia macrocarpa] >AXR94753.1 ribosomal protein S8 [Hodgsonia macrocarpa])

HSP 1 Score: 253.1 bits (645), Expect = 2.4e-63
Identity = 125/130 (96.15%), Postives = 128/130 (98.46%), Query Frame = 0 

Query: 104 SITNIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR 163
           +I NIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR
Sbjct: 5   TIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR 64

Query: 164 HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMGNVILSTSRGIMTDREAQLQG 223
           HRRNRKGPYKTILNLKRISRPGLRIYSNYQ+IPRILGGMG VILSTSRGIMTDREA+LQG
Sbjct: 65  HRRNRKGPYKTILNLKRISRPGLRIYSNYQRIPRILGGMGIVILSTSRGIMTDREARLQG 124

Query: 224 IGGEILCYIW 234
           IGGEILCYIW
Sbjct: 125 IGGEILCYIW 134

[Close]
BLAST of Cla97C11G214485 vs. NCBI nr
Match: AHM91011.1 (ribosomal protein S8 [Lagenaria siceraria])

HSP 1 Score: 253.1 bits (645), Expect = 2.4e-63
Identity = 125/130 (96.15%), Postives = 127/130 (97.69%), Query Frame = 0 

Query: 104 SITNIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR 163
           +I NIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR
Sbjct: 5   TIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR 64

Query: 164 HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMGNVILSTSRGIMTDREAQLQG 223
           HRRNRKGPYKTILN KRISRPGLRIYSNYQQIPRILGGMG VILSTSRGIMTDREA+LQG
Sbjct: 65  HRRNRKGPYKTILNFKRISRPGLRIYSNYQQIPRILGGMGIVILSTSRGIMTDREARLQG 124

Query: 224 IGGEILCYIW 234
           IGGEILCYIW
Sbjct: 125 IGGEILCYIW 134

[Close]
BLAST of Cla97C11G214485 vs. NCBI nr
Match: YP_009753124.1 (ribosomal protein S8 [Corallocarpus boehmii] >QIT06196.1 ribosomal protein S8 [Corallocarpus boehmii])

HSP 1 Score: 253.1 bits (645), Expect = 2.4e-63
Identity = 125/130 (96.15%), Postives = 128/130 (98.46%), Query Frame = 0 

Query: 104 SITNIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR 163
           +I NIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNK+FWVLTLR
Sbjct: 5   TIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKEFWVLTLR 64

Query: 164 HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMGNVILSTSRGIMTDREAQLQG 223
           HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMG VILSTSRGIMTDREA+LQG
Sbjct: 65  HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMGIVILSTSRGIMTDREARLQG 124

Query: 224 IGGEILCYIW 234
           IGGEILCYIW
Sbjct: 125 IGGEILCYIW 134

[Close]
BLAST of Cla97C11G214485 vs. ExPASy Swiss-Prot
Match: Q4VZK0 (30S ribosomal protein S8, chloroplastic OS=Cucumis sativus OX=3659 GN=rps8 PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 7.0e-66
Identity = 124/130 (95.38%), Postives = 128/130 (98.46%), Query Frame = 0 

Query: 104 SITNIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR 163
           +I NIITSIRNADMNRKGMVRIP+TNITENIVKILLREGFIENVRKHRESNKDFWVLTLR
Sbjct: 5   TIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLR 64

Query: 164 HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMGNVILSTSRGIMTDREAQLQG 223
           HRRNRKGPYKTILNLKRISRPGLRIYSNYQ+IPRILGGMG VILSTSRGIMTDREA+LQG
Sbjct: 65  HRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREARLQG 124

Query: 224 IGGEILCYIW 234
           IGGEILCYIW
Sbjct: 125 IGGEILCYIW 134

[Close]
BLAST of Cla97C11G214485 vs. ExPASy Swiss-Prot
Match: Q49KW3 (30S ribosomal protein S8, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=rps8 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 6.3e-59
Identity = 113/130 (86.92%), Postives = 124/130 (95.38%), Query Frame = 0 

Query: 104 SITNIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR 163
           +I +IITSIRNADMNRKG ++I STNITENIVKILLREGFI+NVRKH+E+NK F VLTLR
Sbjct: 5   TIADIITSIRNADMNRKGTIQIASTNITENIVKILLREGFIKNVRKHQENNKYFLVLTLR 64

Query: 164 HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMGNVILSTSRGIMTDREAQLQG 223
           HRRNRKGPY+TILNLKRISRPGLRIYSNYQ+IPRILGGMG VILSTSRGIMTDREA+L+G
Sbjct: 65  HRRNRKGPYRTILNLKRISRPGLRIYSNYQRIPRILGGMGIVILSTSRGIMTDREARLEG 124

Query: 224 IGGEILCYIW 234
           IGGEILCYIW
Sbjct: 125 IGGEILCYIW 134

[Close]
BLAST of Cla97C11G214485 vs. ExPASy Swiss-Prot
Match: A0ZZ70 (30S ribosomal protein S8, chloroplastic OS=Gossypium barbadense OX=3634 GN=rps8 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 3.2e-58
Identity = 112/130 (86.15%), Postives = 123/130 (94.62%), Query Frame = 0 

Query: 104 SITNIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR 163
           +I +IITSIRNADMNRKG ++I STNITENIV+ILLREGFI+NVRKHRE NK F VLTLR
Sbjct: 5   TIADIITSIRNADMNRKGTIQIGSTNITENIVQILLREGFIDNVRKHRERNKYFLVLTLR 64

Query: 164 HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMGNVILSTSRGIMTDREAQLQG 223
           HRRNRKGP++TILNL+RISRPGLRIYSNYQQIPRILGGMG VILSTSRGIMTDREA+L+G
Sbjct: 65  HRRNRKGPHRTILNLRRISRPGLRIYSNYQQIPRILGGMGIVILSTSRGIMTDREARLEG 124

Query: 224 IGGEILCYIW 234
           IGGEILCYIW
Sbjct: 125 IGGEILCYIW 134

[Close]
BLAST of Cla97C11G214485 vs. ExPASy Swiss-Prot
Match: Q2L942 (30S ribosomal protein S8, chloroplastic OS=Gossypium hirsutum OX=3635 GN=rps8 PE=3 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.2e-57
Identity = 112/130 (86.15%), Postives = 122/130 (93.85%), Query Frame = 0 

Query: 104 SITNIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR 163
           +I +IITSIRNADMNRKG ++I STNITENIVKILLREGFI+NVRKHRE NK F VLTLR
Sbjct: 5   TIADIITSIRNADMNRKGTIQIGSTNITENIVKILLREGFIDNVRKHRERNKYFLVLTLR 64

Query: 164 HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMGNVILSTSRGIMTDREAQLQG 223
           HRRNRKGP++TILNL+RISRPGLRIYSNYQQIPRILGGMG VILSTSRGIMTDREA+L+G
Sbjct: 65  HRRNRKGPHRTILNLRRISRPGLRIYSNYQQIPRILGGMGIVILSTSRGIMTDREARLEG 124

Query: 224 IGGEILCYIW 234
           IGGEILC IW
Sbjct: 125 IGGEILCSIW 134

[Close]
BLAST of Cla97C11G214485 vs. ExPASy Swiss-Prot
Match: A7Y3I5 (30S ribosomal protein S8, chloroplastic OS=Ipomoea purpurea OX=4121 GN=rps8 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 4.5e-57
Identity = 110/130 (84.62%), Postives = 121/130 (93.08%), Query Frame = 0 

Query: 104 SITNIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR 163
           +I  IITSIRNADM+RK +VRI STNITENIV+ILLREGFIENVRKHRE NK+F+VLTLR
Sbjct: 5   TIAEIITSIRNADMDRKRVVRIASTNITENIVRILLREGFIENVRKHREKNKNFFVLTLR 64

Query: 164 HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMGNVILSTSRGIMTDREAQLQG 223
           HRRNRK PY+ I NLKRISRPGLRIYSNYQ+IP+ILGGMG VILSTSRGIMTDREA+L+G
Sbjct: 65  HRRNRKRPYRNIFNLKRISRPGLRIYSNYQRIPKILGGMGVVILSTSRGIMTDREARLEG 124

Query: 224 IGGEILCYIW 234
           IGGEILCYIW
Sbjct: 125 IGGEILCYIW 134

[Close]
BLAST of Cla97C11G214485 vs. ExPASy TrEMBL
Match: A0A1P8LE42 (Ribosomal protein S8 OS=Citrullus mucosospermus OX=519315 GN=rps8 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 4.0e-64
Identity = 126/130 (96.92%), Postives = 128/130 (98.46%), Query Frame = 0 

Query: 104 SITNIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR 163
           +I NIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR
Sbjct: 5   TIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR 64

Query: 164 HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMGNVILSTSRGIMTDREAQLQG 223
           HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMG VILSTSRGIMTDREA+LQG
Sbjct: 65  HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMGIVILSTSRGIMTDREARLQG 124

Query: 224 IGGEILCYIW 234
           IGGEILCYIW
Sbjct: 125 IGGEILCYIW 134

[Close]
BLAST of Cla97C11G214485 vs. ExPASy TrEMBL
Match: X2F6H3 (30S ribosomal protein S8, chloroplastic OS=Lagenaria siceraria OX=3668 GN=rps8 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 4.0e-64
Identity = 126/130 (96.92%), Postives = 128/130 (98.46%), Query Frame = 0 

Query: 104 SITNIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR 163
           +I NIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR
Sbjct: 5   TIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR 64

Query: 164 HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMGNVILSTSRGIMTDREAQLQG 223
           HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMG VILSTSRGIMTDREA+LQG
Sbjct: 65  HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMGIVILSTSRGIMTDREARLQG 124

Query: 224 IGGEILCYIW 234
           IGGEILCYIW
Sbjct: 125 IGGEILCYIW 134

[Close]
BLAST of Cla97C11G214485 vs. ExPASy TrEMBL
Match: A0A1P8LEK4 (Ribosomal protein S8 OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=rps8 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 4.0e-64
Identity = 126/130 (96.92%), Postives = 128/130 (98.46%), Query Frame = 0 

Query: 104 SITNIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR 163
           +I NIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR
Sbjct: 5   TIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR 64

Query: 164 HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMGNVILSTSRGIMTDREAQLQG 223
           HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMG VILSTSRGIMTDREA+LQG
Sbjct: 65  HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMGIVILSTSRGIMTDREARLQG 124

Query: 224 IGGEILCYIW 234
           IGGEILCYIW
Sbjct: 125 IGGEILCYIW 134

[Close]
BLAST of Cla97C11G214485 vs. ExPASy TrEMBL
Match: A0A7T3QNL9 (Ribosomal protein S8 OS=Benincasa hispida OX=102211 GN=rps8 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 4.0e-64
Identity = 126/130 (96.92%), Postives = 128/130 (98.46%), Query Frame = 0 

Query: 104 SITNIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR 163
           +I NIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR
Sbjct: 5   TIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR 64

Query: 164 HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMGNVILSTSRGIMTDREAQLQG 223
           HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMG VILSTSRGIMTDREA+LQG
Sbjct: 65  HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMGIVILSTSRGIMTDREARLQG 124

Query: 224 IGGEILCYIW 234
           IGGEILCYIW
Sbjct: 125 IGGEILCYIW 134

[Close]
BLAST of Cla97C11G214485 vs. ExPASy TrEMBL
Match: A0A343A8E6 (30S ribosomal protein S8, chloroplastic OS=Citrullus lanatus OX=3654 GN=rps8 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 4.0e-64
Identity = 126/130 (96.92%), Postives = 128/130 (98.46%), Query Frame = 0 

Query: 104 SITNIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR 163
           +I NIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR
Sbjct: 5   TIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR 64

Query: 164 HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMGNVILSTSRGIMTDREAQLQG 223
           HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMG VILSTSRGIMTDREA+LQG
Sbjct: 65  HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMGIVILSTSRGIMTDREARLQG 124

Query: 224 IGGEILCYIW 234
           IGGEILCYIW
Sbjct: 125 IGGEILCYIW 134

[Close]
BLAST of Cla97C11G214485 vs. TAIR 10
Match: ATCG00770.1 (ribosomal protein S8 )

HSP 1 Score: 213.4 bits (542), Expect = 2.0e-55
Identity = 108/130 (83.08%), Postives = 120/130 (92.31%), Query Frame = 0 

Query: 104 SITNIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLR 163
           +I +IITSIRNADMNRKG VRI STNITE+IVKILLREGFIENVRKHRE+N+ F +LTLR
Sbjct: 5   TIADIITSIRNADMNRKGTVRIGSTNITESIVKILLREGFIENVRKHRENNQYFLILTLR 64

Query: 164 HRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMGNVILSTSRGIMTDREAQLQG 223
           HRRN+K  YKTILNLKRISRPGLRIYSN Q+IPRILGG+G VILSTS+GIMTDREA+L+ 
Sbjct: 65  HRRNKKESYKTILNLKRISRPGLRIYSNSQRIPRILGGIGIVILSTSQGIMTDREARLKR 124

Query: 224 IGGEILCYIW 234
           IGGEILCYIW
Sbjct: 125 IGGEILCYIW 134

[Close]
BLAST of Cla97C11G214485 vs. TAIR 10
Match: ATCG00860.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 84.0 bits (206), Expect = 1.8e-16
Identity = 41/47 (87.23%), Postives = 45/47 (95.74%), Query Frame = 0 

Query: 11   RNRRWLRTNSSLSNGFFRSNTPSESYQYLSNLFLSNGTLLDQMTKTL 58
            + +RWLRTNSSLSNGFFRSNT SESYQYLSNLF+SNGTLLD+MTKTL
Sbjct: 2232 QRQRWLRTNSSLSNGFFRSNTRSESYQYLSNLFISNGTLLDRMTKTL 2278

[Close]
BLAST of Cla97C11G214485 vs. TAIR 10
Match: ATCG01280.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 84.0 bits (206), Expect = 1.8e-16
Identity = 41/47 (87.23%), Postives = 45/47 (95.74%), Query Frame = 0 

Query: 11   RNRRWLRTNSSLSNGFFRSNTPSESYQYLSNLFLSNGTLLDQMTKTL 58
            + +RWLRTNSSLSNGFFRSNT SESYQYLSNLF+SNGTLLD+MTKTL
Sbjct: 2232 QRQRWLRTNSSLSNGFFRSNTRSESYQYLSNLFISNGTLLDRMTKTL 2278

The following BLAST results are available for this feature:
BLAST of Cla97C11G214485 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_009326025.18.2e-6496.92ribosomal protein S8 [Citrullus lanatus] >YP_009348067.1 ribosomal protein S8 [C... [more]
YP_009431592.12.4e-6396.15ribosomal protein S8 [Citrullus amarus] >APW82498.1 ribosomal protein S8 [Citrul... [more]
YP_009525221.12.4e-6396.15ribosomal protein S8 [Hodgsonia macrocarpa] >YP_009560871.1 ribosomal protein S8... [more]
AHM91011.12.4e-6396.15ribosomal protein S8 [Lagenaria siceraria][more]
YP_009753124.12.4e-6396.15ribosomal protein S8 [Corallocarpus boehmii] >QIT06196.1 ribosomal protein S8 [C... [more]
BLAST of Cla97C11G214485 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q4VZK07.0e-6695.3830S ribosomal protein S8, chloroplastic OS=Cucumis sativus OX=3659 GN=rps8 PE=3 ... [more]
Q49KW36.3e-5986.9230S ribosomal protein S8, chloroplastic OS=Eucalyptus globulus subsp. globulus O... [more]
A0ZZ703.2e-5886.1530S ribosomal protein S8, chloroplastic OS=Gossypium barbadense OX=3634 GN=rps8 ... [more]
Q2L9421.2e-5786.1530S ribosomal protein S8, chloroplastic OS=Gossypium hirsutum OX=3635 GN=rps8 PE... [more]
A7Y3I54.5e-5784.6230S ribosomal protein S8, chloroplastic OS=Ipomoea purpurea OX=4121 GN=rps8 PE=3... [more]
BLAST of Cla97C11G214485 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1P8LE424.0e-6496.92Ribosomal protein S8 OS=Citrullus mucosospermus OX=519315 GN=rps8 PE=3 SV=1[more]
X2F6H34.0e-6496.9230S ribosomal protein S8, chloroplastic OS=Lagenaria siceraria OX=3668 GN=rps8 P... [more]
A0A1P8LEK44.0e-6496.92Ribosomal protein S8 OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=rps8 PE=3... [more]
A0A7T3QNL94.0e-6496.92Ribosomal protein S8 OS=Benincasa hispida OX=102211 GN=rps8 PE=4 SV=1[more]
A0A343A8E64.0e-6496.9230S ribosomal protein S8, chloroplastic OS=Citrullus lanatus OX=3654 GN=rps8 PE=... [more]
BLAST of Cla97C11G214485 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG00770.12.0e-5583.08ribosomal protein S8 [more]
ATCG00860.11.8e-1687.23Chloroplast Ycf2;ATPase, AAA type, core [more]
ATCG01280.11.8e-1687.23Chloroplast Ycf2;ATPase, AAA type, core [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.1370.30coord: 102..175
e-value: 4.8E-25
score: 89.2
NoneNo IPR availableGENE3D3.30.1490.10coord: 176..233
e-value: 2.5E-28
score: 99.3
NoneNo IPR availablePANTHERPTHR11758:SF437S RIBOSOMAL PROTEIN S8, MITOCHONDRIALcoord: 104..232
IPR000630Ribosomal protein S8PFAMPF00410Ribosomal_S8coord: 105..233
e-value: 4.7E-39
score: 133.2
IPR000630Ribosomal protein S8PANTHERPTHR1175840S RIBOSOMAL PROTEIN S15Acoord: 104..232
IPR000630Ribosomal protein S8HAMAPMF_01302_BRibosomal_S8_Bcoord: 100..233
score: 27.805824
IPR035987Ribosomal protein S8 superfamilySUPERFAMILY56047Ribosomal protein S8coord: 104..233

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C11G214485.1Cla97C11G214485.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0009507 chloroplast
cellular_component GO:0005840 ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome