Cla97C11G214405 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C11G214405
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Photosystem I P700 chlorophyll a apoprotein A1
Location	Cla97Chr11: 7793099 .. 7793746 (-)
RNA-Seq Expression	Cla97C11G214405
Synteny	Cla97C11G214405

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATTTCCACGGTGCTCGTTTTTCCAATTATGAAGCATGGCTAGGCGATCCTACTCACATTGGCCCTAGTGCCCAGGTGGTTTGGCCAATAGTGGGCCAAGAAATATTGAATGGTGATGTAGGTGGGGGTTTTCGAGGAATACAAATAACCTCTGGGTTTTTTCAGCTGTGGCGAGCATCTGGAATAACTAGTGAATTACAACTCTATTGTACCGCAATTGGTGCATTAGTCTTTGCAGCCTTAATGCTTTTTGCCGGTTGGTTTCATTATCACAAGGCTGCTCCTAAATTGGCTTGGTTCCAAGATGTCGAATCCATGTTGAATCACCATTTAGCGGGTCTGTTAGGACTTGGGTCTCTTTCTTGGGCGGGACATCAAGTACACGTATCTTTACCGATTAACCAATTTCTAAATGCTGGAGTAGATCCTAAAGAGATTCCACTTCCTCATGAATTTATCTTGAATCGGGATCTTTTGGCGCAACTTTATCCTAGTTTTGCTGAGGGAGCAACCCCATTTTTCACTTTGAATTGGTCAAAATATGCGGAATTTCTTACTTTTCGTGGAGGATTAGATCCAGTAACCGGGGGTCTATGGTTAACCGATATTGCACACCATCATTTAGCTATTGCAATTCTTTCCTGA

mRNA sequence

ATGTATTTCCACGGTGCTCGTTTTTCCAATTATGAAGCATGGCTAGGCGATCCTACTCACATTGGCCCTAGTGCCCAGCTGTGGCGAGCATCTGGAATAACTAGTGAATTACAACTCTATTGTACCGCAATTGGTGCATTAGTCTTTGCAGCCTTAATGCTTTTTGCCGGTTGGTTTCATTATCACAAGGCTGCTCCTAAATTGGCTTGGTTCCAAGATGTCGAATCCATGTTGAATCACCATTTAGCGGGTCTGTTAGGACTTGGGTCTCTTTCTTGGGCGGGACATCAAGTACACGTATCTTTACCGATTAACCAATTTCTAAATGCTGGAGTAGATCCTAAAGAGATTCCACTTCCTCATGAATTTATCTTGAATCGGGATCTTTTGGCGCAACTTTATCCTAGTTTTGCTGAGGGAGCAACCCCATTTTTCACTTTGAATTGGTCAAAATATGCGGAATTTCTTACTTTTCGTGGAGGATTAGATCCAGTAACCGGGGGTCTATGGTTAACCGATATTGCACACCATCATTTAGCTATTGCAATTCTTTCCTGA

Coding sequence (CDS)

ATGTATTTCCACGGTGCTCGTTTTTCCAATTATGAAGCATGGCTAGGCGATCCTACTCACATTGGCCCTAGTGCCCAGCTGTGGCGAGCATCTGGAATAACTAGTGAATTACAACTCTATTGTACCGCAATTGGTGCATTAGTCTTTGCAGCCTTAATGCTTTTTGCCGGTTGGTTTCATTATCACAAGGCTGCTCCTAAATTGGCTTGGTTCCAAGATGTCGAATCCATGTTGAATCACCATTTAGCGGGTCTGTTAGGACTTGGGTCTCTTTCTTGGGCGGGACATCAAGTACACGTATCTTTACCGATTAACCAATTTCTAAATGCTGGAGTAGATCCTAAAGAGATTCCACTTCCTCATGAATTTATCTTGAATCGGGATCTTTTGGCGCAACTTTATCCTAGTTTTGCTGAGGGAGCAACCCCATTTTTCACTTTGAATTGGTCAAAATATGCGGAATTTCTTACTTTTCGTGGAGGATTAGATCCAGTAACCGGGGGTCTATGGTTAACCGATATTGCACACCATCATTTAGCTATTGCAATTCTTTCCTGA

Protein sequence

MYFHGARFSNYEAWLGDPTHIGPSAQLWRASGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWSKYAEFLTFRGGLDPVTGGLWLTDIAHHHLAIAILS

Homology

[Close]

BLAST of Cla97C11G214405 vs. NCBI nr
Match: TKS04886.1 (Photosystem I P700 chlorophyll a apoprotein A1 [Populus alba])

HSP 1 Score: 389.0 bits (998), Expect = 2.2e-104
Identity = 182/184 (98.91%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   MYFHGARFSNYEAWLGDPTHIGPSAQLWRASGITSELQLYCTAIGALVFAALMLFAGWFH 60
           MYFHGARFSNYEAWL DPTHIGPSAQLWRASGITSELQLYCTAIGALVFAALMLFAGWFH
Sbjct: 88  MYFHGARFSNYEAWLSDPTHIGPSAQLWRASGITSELQLYCTAIGALVFAALMLFAGWFH 147

Query: 61  YHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQFLNAGVDPKEIPLP 120
           YHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQFLNAGVDPKEIPLP
Sbjct: 148 YHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQFLNAGVDPKEIPLP 207

Query: 121 HEFILNRDLLAQLYPSFAEGATPFFTLNWSKYAEFLTFRGGLDPVTGGLWLTDIAHHHLA 180
           HEFILNRDLLAQLYPSFAEGATPFFTLNWSKY+EFLTFRGGLDPVTGGLWLTDIAHHHLA
Sbjct: 208 HEFILNRDLLAQLYPSFAEGATPFFTLNWSKYSEFLTFRGGLDPVTGGLWLTDIAHHHLA 267

Query: 181 IAIL 185
           IAIL
Sbjct: 268 IAIL 271

[Close]

BLAST of Cla97C11G214405 vs. NCBI nr
Match: TYI09257.1 (hypothetical protein ES332_A09G059300v1 [Gossypium tomentosum])

HSP 1 Score: 377.9 bits (969), Expect = 5.1e-101
Identity = 181/198 (91.41%), Postives = 182/198 (91.92%), Query Frame = 0


Query: 1   MYFHGARFSNYEAWLGDPTHIGPSAQ--------------LWRASGITSELQLYCTAIGA 60
           MYFHGARFSNYEAWL DPTHIGPSAQ              +WRASGITSELQLYCTAIGA
Sbjct: 88  MYFHGARFSNYEAWLSDPTHIGPSAQVVWPIVGQEILNGDIWRASGITSELQLYCTAIGA 147

Query: 61  LVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQ 120
           LVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQ
Sbjct: 148 LVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQ 207

Query: 121 FLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWSKYAEFLTFRGGLDPVT 180
           FLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWS YAEFLTFRGGLDPVT
Sbjct: 208 FLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWSNYAEFLTFRGGLDPVT 267

Query: 181 GGLWLTDIAHHHLAIAIL 185
           GGLWLTDIAHHHLAIAIL
Sbjct: 268 GGLWLTDIAHHHLAIAIL 285

[Close]

BLAST of Cla97C11G214405 vs. NCBI nr
Match: YP_009751738.1 (photosystem I P700 apoprotein A1 [Herpetospermum pedunculosum] >QIT04471.1 photosystem I P700 apoprotein A1 [Herpetospermum pedunculosum] >QJR52956.1 photosystem I P700 apoprotein A1 [Herpetospermum pedunculosum])

HSP 1 Score: 376.7 bits (966), Expect = 1.1e-100
Identity = 184/214 (85.98%), Postives = 184/214 (85.98%), Query Frame = 0


Query: 1   MYFHGARFSNYEAWLGDPTHIGPSA------------------------------QLWRA 60
           MYFHGARFSNYEAWLGDPTHIGPSA                              QLWRA
Sbjct: 88  MYFHGARFSNYEAWLGDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQLWRA 147

Query: 61  SGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGS 120
           SGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGS
Sbjct: 148 SGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGS 207

Query: 121 LSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWS 180
           LSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWS
Sbjct: 208 LSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWS 267

Query: 181 KYAEFLTFRGGLDPVTGGLWLTDIAHHHLAIAIL 185
           KYAEFLTFRGGLDPVTGGLWLTDIAHHHLAIAIL
Sbjct: 268 KYAEFLTFRGGLDPVTGGLWLTDIAHHHLAIAIL 301

[Close]

BLAST of Cla97C11G214405 vs. NCBI nr
Match: YP_009751485.1 (photosystem I P700 apoprotein A1 [Thladiantha dubia] >QIT03966.1 photosystem I P700 apoprotein A1 [Thladiantha dubia])

HSP 1 Score: 376.7 bits (966), Expect = 1.1e-100
Identity = 184/214 (85.98%), Postives = 184/214 (85.98%), Query Frame = 0


Query: 1   MYFHGARFSNYEAWLGDPTHIGPSA------------------------------QLWRA 60
           MYFHGARFSNYEAWLGDPTHIGPSA                              QLWRA
Sbjct: 88  MYFHGARFSNYEAWLGDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQLWRA 147

Query: 61  SGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGS 120
           SGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGS
Sbjct: 148 SGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGS 207

Query: 121 LSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWS 180
           LSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWS
Sbjct: 208 LSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWS 267

Query: 181 KYAEFLTFRGGLDPVTGGLWLTDIAHHHLAIAIL 185
           KYAEFLTFRGGLDPVTGGLWLTDIAHHHLAIAIL
Sbjct: 268 KYAEFLTFRGGLDPVTGGLWLTDIAHHHLAIAIL 301

[Close]

BLAST of Cla97C11G214405 vs. NCBI nr
Match: YP_009752327.1 (photosystem I P700 apoprotein A1 [Bryonia marmorata] >QIT04301.1 photosystem I P700 apoprotein A1 [Bryonia marmorata])

HSP 1 Score: 376.7 bits (966), Expect = 1.1e-100
Identity = 184/214 (85.98%), Postives = 184/214 (85.98%), Query Frame = 0


Query: 1   MYFHGARFSNYEAWLGDPTHIGPSA------------------------------QLWRA 60
           MYFHGARFSNYEAWLGDPTHIGPSA                              QLWRA
Sbjct: 88  MYFHGARFSNYEAWLGDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQLWRA 147

Query: 61  SGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGS 120
           SGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGS
Sbjct: 148 SGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGS 207

Query: 121 LSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWS 180
           LSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWS
Sbjct: 208 LSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWS 267

Query: 181 KYAEFLTFRGGLDPVTGGLWLTDIAHHHLAIAIL 185
           KYAEFLTFRGGLDPVTGGLWLTDIAHHHLAIAIL
Sbjct: 268 KYAEFLTFRGGLDPVTGGLWLTDIAHHHLAIAIL 301

[Close]

BLAST of Cla97C11G214405 vs. ExPASy Swiss-Prot
Match: Q2QD89 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis sativus OX=3659 GN=psaA PE=3 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 5.7e-103
Identity = 182/214 (85.05%), Postives = 184/214 (85.98%), Query Frame = 0


Query: 1   MYFHGARFSNYEAWLGDPTHIGPSA------------------------------QLWRA 60
           MYFHGARFSNYEAWLGDPTHIGPSA                              Q+WRA
Sbjct: 88  MYFHGARFSNYEAWLGDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQMWRA 147

Query: 61  SGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGS 120
           SGIT+ELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGS
Sbjct: 148 SGITNELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGS 207

Query: 121 LSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWS 180
           LSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWS
Sbjct: 208 LSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWS 267

Query: 181 KYAEFLTFRGGLDPVTGGLWLTDIAHHHLAIAIL 185
           KYAEFLTFRGGLDPVTGGLWLTDIAHHHLAIAIL
Sbjct: 268 KYAEFLTFRGGLDPVTGGLWLTDIAHHHLAIAIL 301

[Close]

BLAST of Cla97C11G214405 vs. ExPASy Swiss-Prot
Match: Q9MTN8 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Oenothera elata subsp. hookeri OX=85636 GN=psaA PE=3 SV=2)

HSP 1 Score: 374.4 bits (960), Expect = 7.4e-103
Identity = 183/214 (85.51%), Postives = 183/214 (85.51%), Query Frame = 0


Query: 1   MYFHGARFSNYEAWLGDPTHIGPSA------------------------------QLWRA 60
           MYFHGARFSNYEAWL DPTHIGPSA                              QLWRA
Sbjct: 88  MYFHGARFSNYEAWLSDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQLWRA 147

Query: 61  SGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGS 120
           SGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGS
Sbjct: 148 SGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGS 207

Query: 121 LSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWS 180
           LSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWS
Sbjct: 208 LSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWS 267

Query: 181 KYAEFLTFRGGLDPVTGGLWLTDIAHHHLAIAIL 185
           KYAEFLTFRGGLDPVTGGLWLTDIAHHHLAIAIL
Sbjct: 268 KYAEFLTFRGGLDPVTGGLWLTDIAHHHLAIAIL 301

[Close]

BLAST of Cla97C11G214405 vs. ExPASy Swiss-Prot
Match: Q49KZ8 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=psaA PE=3 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 1.3e-102
Identity = 182/214 (85.05%), Postives = 183/214 (85.51%), Query Frame = 0


Query: 1   MYFHGARFSNYEAWLGDPTHIGPSA------------------------------QLWRA 60
           MYFHGARFSNYEAWL DPTHIGPSA                              Q+WRA
Sbjct: 88  MYFHGARFSNYEAWLSDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQIWRA 147

Query: 61  SGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGS 120
           SGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGS
Sbjct: 148 SGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGS 207

Query: 121 LSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWS 180
           LSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWS
Sbjct: 208 LSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWS 267

Query: 181 KYAEFLTFRGGLDPVTGGLWLTDIAHHHLAIAIL 185
           KYAEFLTFRGGLDPVTGGLWLTDIAHHHLAIAIL
Sbjct: 268 KYAEFLTFRGGLDPVTGGLWLTDIAHHHLAIAIL 301

[Close]

BLAST of Cla97C11G214405 vs. ExPASy Swiss-Prot
Match: A0ZZ35 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Gossypium barbadense OX=3634 GN=psaA PE=3 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 1.3e-102
Identity = 182/214 (85.05%), Postives = 183/214 (85.51%), Query Frame = 0


Query: 1   MYFHGARFSNYEAWLGDPTHIGPSA------------------------------QLWRA 60
           MYFHGARFSNYEAWL DPTHIGPSA                              Q+WRA
Sbjct: 88  MYFHGARFSNYEAWLSDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQIWRA 147

Query: 61  SGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGS 120
           SGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGS
Sbjct: 148 SGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGS 207

Query: 121 LSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWS 180
           LSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWS
Sbjct: 208 LSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWS 267

Query: 181 KYAEFLTFRGGLDPVTGGLWLTDIAHHHLAIAIL 185
           KYAEFLTFRGGLDPVTGGLWLTDIAHHHLAIAIL
Sbjct: 268 KYAEFLTFRGGLDPVTGGLWLTDIAHHHLAIAIL 301

[Close]

BLAST of Cla97C11G214405 vs. ExPASy Swiss-Prot
Match: Q2L907 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Gossypium hirsutum OX=3635 GN=psaA PE=3 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 1.3e-102
Identity = 182/214 (85.05%), Postives = 183/214 (85.51%), Query Frame = 0


Query: 1   MYFHGARFSNYEAWLGDPTHIGPSA------------------------------QLWRA 60
           MYFHGARFSNYEAWL DPTHIGPSA                              Q+WRA
Sbjct: 88  MYFHGARFSNYEAWLSDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQIWRA 147

Query: 61  SGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGS 120
           SGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGS
Sbjct: 148 SGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGS 207

Query: 121 LSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWS 180
           LSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWS
Sbjct: 208 LSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWS 267

Query: 181 KYAEFLTFRGGLDPVTGGLWLTDIAHHHLAIAIL 185
           KYAEFLTFRGGLDPVTGGLWLTDIAHHHLAIAIL
Sbjct: 268 KYAEFLTFRGGLDPVTGGLWLTDIAHHHLAIAIL 301

[Close]

BLAST of Cla97C11G214405 vs. ExPASy TrEMBL
Match: A0A4V6A9C2 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Populus alba OX=43335 GN=D5086_0000138750 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.1e-104
Identity = 182/184 (98.91%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   MYFHGARFSNYEAWLGDPTHIGPSAQLWRASGITSELQLYCTAIGALVFAALMLFAGWFH 60
           MYFHGARFSNYEAWL DPTHIGPSAQLWRASGITSELQLYCTAIGALVFAALMLFAGWFH
Sbjct: 88  MYFHGARFSNYEAWLSDPTHIGPSAQLWRASGITSELQLYCTAIGALVFAALMLFAGWFH 147

Query: 61  YHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQFLNAGVDPKEIPLP 120
           YHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQFLNAGVDPKEIPLP
Sbjct: 148 YHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQFLNAGVDPKEIPLP 207

Query: 121 HEFILNRDLLAQLYPSFAEGATPFFTLNWSKYAEFLTFRGGLDPVTGGLWLTDIAHHHLA 180
           HEFILNRDLLAQLYPSFAEGATPFFTLNWSKY+EFLTFRGGLDPVTGGLWLTDIAHHHLA
Sbjct: 208 HEFILNRDLLAQLYPSFAEGATPFFTLNWSKYSEFLTFRGGLDPVTGGLWLTDIAHHHLA 267

Query: 181 IAIL 185
           IAIL
Sbjct: 268 IAIL 271

[Close]

BLAST of Cla97C11G214405 vs. ExPASy TrEMBL
Match: A0A287RJF9 (Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 2.4e-104
Identity = 181/184 (98.37%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   MYFHGARFSNYEAWLGDPTHIGPSAQLWRASGITSELQLYCTAIGALVFAALMLFAGWFH 60
           MYFHGARFSNYEAWL DPTHIGPSAQLWRASGITSELQLYCTAIGALVFAALMLFAGWFH
Sbjct: 63  MYFHGARFSNYEAWLSDPTHIGPSAQLWRASGITSELQLYCTAIGALVFAALMLFAGWFH 122

Query: 61  YHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQFLNAGVDPKEIPLP 120
           YHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQ+HVSLPINQFL+AGVDPKEIPLP
Sbjct: 123 YHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQIHVSLPINQFLDAGVDPKEIPLP 182

Query: 121 HEFILNRDLLAQLYPSFAEGATPFFTLNWSKYAEFLTFRGGLDPVTGGLWLTDIAHHHLA 180
           HEFILNRDLLAQLYPSFAEGATPFFTLNWSKYAEFLTFRGGLDPVTGGLWLTDIAHHHLA
Sbjct: 183 HEFILNRDLLAQLYPSFAEGATPFFTLNWSKYAEFLTFRGGLDPVTGGLWLTDIAHHHLA 242

Query: 181 IAIL 185
           IAIL
Sbjct: 243 IAIL 246

[Close]

BLAST of Cla97C11G214405 vs. ExPASy TrEMBL
Match: A0A287U4Q9 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Hordeum vulgare subsp. vulgare OX=112509 GN=4525132 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 2.4e-104
Identity = 181/184 (98.37%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   MYFHGARFSNYEAWLGDPTHIGPSAQLWRASGITSELQLYCTAIGALVFAALMLFAGWFH 60
           MYFHGARFSNYEAWL DPTHIGPSAQLWRASGITSELQLYCTAIGALVFAALMLFAGWFH
Sbjct: 63  MYFHGARFSNYEAWLSDPTHIGPSAQLWRASGITSELQLYCTAIGALVFAALMLFAGWFH 122

Query: 61  YHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQFLNAGVDPKEIPLP 120
           YHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQ+HVSLPINQFL+AGVDPKEIPLP
Sbjct: 123 YHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQIHVSLPINQFLDAGVDPKEIPLP 182

Query: 121 HEFILNRDLLAQLYPSFAEGATPFFTLNWSKYAEFLTFRGGLDPVTGGLWLTDIAHHHLA 180
           HEFILNRDLLAQLYPSFAEGATPFFTLNWSKYAEFLTFRGGLDPVTGGLWLTDIAHHHLA
Sbjct: 183 HEFILNRDLLAQLYPSFAEGATPFFTLNWSKYAEFLTFRGGLDPVTGGLWLTDIAHHHLA 242

Query: 181 IAIL 185
           IAIL
Sbjct: 243 IAIL 246

[Close]

BLAST of Cla97C11G214405 vs. ExPASy TrEMBL
Match: A0A0E0R1N4 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Oryza rufipogon OX=4529 PE=3 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.3e-102
Identity = 175/184 (95.11%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   MYFHGARFSNYEAWLGDPTHIGPSAQLWRASGITSELQLYCTAIGALVFAALMLFAGWFH 60
           MYFHGARFSNYEAWL DPTHIGPSAQ+WRASGITSELQLYCTAIGAL+FA+LMLFAGWFH
Sbjct: 88  MYFHGARFSNYEAWLSDPTHIGPSAQIWRASGITSELQLYCTAIGALIFASLMLFAGWFH 147

Query: 61  YHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQFLNAGVDPKEIPLP 120
           YHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQ+HVSLPINQFL+AGVDPKEIPLP
Sbjct: 148 YHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQIHVSLPINQFLDAGVDPKEIPLP 207

Query: 121 HEFILNRDLLAQLYPSFAEGATPFFTLNWSKYAEFLTFRGGLDPVTGGLWLTDIAHHHLA 180
           HEFILNRDLLAQLYPSFAEGATPFFTLNWSKYAEFL+FRGGLDP+TGGLWL+DIAHHHLA
Sbjct: 208 HEFILNRDLLAQLYPSFAEGATPFFTLNWSKYAEFLSFRGGLDPITGGLWLSDIAHHHLA 267

Query: 181 IAIL 185
           IAIL
Sbjct: 268 IAIL 271

[Close]

BLAST of Cla97C11G214405 vs. ExPASy TrEMBL
Match: A0A453JEN0 (Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 2.2e-102
Identity = 177/184 (96.20%), Postives = 181/184 (98.37%), Query Frame = 0


Query: 1   MYFHGARFSNYEAWLGDPTHIGPSAQLWRASGITSELQLYCTAIGALVFAALMLFAGWFH 60
           MYFHGARFSNYEAWL DPT IGPSAQLWRASGITSELQLYCTAIGAL+FAALMLFAGWFH
Sbjct: 63  MYFHGARFSNYEAWLSDPTQIGPSAQLWRASGITSELQLYCTAIGALIFAALMLFAGWFH 122

Query: 61  YHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQFLNAGVDPKEIPLP 120
           YH+AAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQ+HVSLPINQFL+AGVDPKEIPLP
Sbjct: 123 YHEAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQIHVSLPINQFLDAGVDPKEIPLP 182

Query: 121 HEFILNRDLLAQLYPSFAEGATPFFTLNWSKYAEFLTFRGGLDPVTGGLWLTDIAHHHLA 180
           HEFILNRDLLAQLYPSFAEGATPFFTLNWSKYAEFLTFRGGLDPVTGGLWLTDI HHHLA
Sbjct: 183 HEFILNRDLLAQLYPSFAEGATPFFTLNWSKYAEFLTFRGGLDPVTGGLWLTDIVHHHLA 242

Query: 181 IAIL 185
           IAIL
Sbjct: 243 IAIL 246

[Close]

BLAST of Cla97C11G214405 vs. TAIR 10
Match: ATCG00350.1 (Photosystem I, PsaA/PsaB protein )

HSP 1 Score: 372.5 bits (955), Expect = 2.0e-103
Identity = 181/214 (84.58%), Postives = 183/214 (85.51%), Query Frame = 0


Query: 1   MYFHGARFSNYEAWLGDPTHIGPSA------------------------------QLWRA 60
           MYFHGARFSNYEAWL DPTHIGPSA                              Q+WRA
Sbjct: 88  MYFHGARFSNYEAWLSDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQIWRA 147

Query: 61  SGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGS 120
           SGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGS
Sbjct: 148 SGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGS 207

Query: 121 LSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWS 180
           LSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWS
Sbjct: 208 LSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWS 267

Query: 181 KYAEFLTFRGGLDPVTGGLWLTDIAHHHLAIAIL 185
           KY+EFLTFRGGLDPVTGGLWLTDIAHHHLAIAIL
Sbjct: 268 KYSEFLTFRGGLDPVTGGLWLTDIAHHHLAIAIL 301

[Close]

BLAST of Cla97C11G214405 vs. TAIR 10
Match: ATCG00340.1 (Photosystem I, PsaA/PsaB protein )

HSP 1 Score: 127.9 bits (320), Expect = 8.6e-30
Identity = 80/226 (35.40%), Postives = 102/226 (45.13%), Query Frame = 0


Query: 3   FHGARFSNYEAWLGDPTHIGPSA---------------------------------QLWR 62
           FH A   N+E W+ DP H+ P A                                 Q W 
Sbjct: 66  FHVAWQGNFETWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGVYQWWY 125

Query: 63  ASGITSELQLYCTAIGALVFAALMLFAGWFHYH-KAAPKLAWFQDVESMLNHHLAGLLGL 122
             G+ +   LY  A+  L  +AL L  GW H   K  P+++WF++ ES LNHHL+GL G+
Sbjct: 126 TIGLRTNEDLYTGALFLLFLSALSLIGGWLHLQPKWKPRVSWFKNAESRLNHHLSGLFGV 185

Query: 123 GSLSWAGHQVHVSLPI--------NQFLNAGVDPKEIPLPHEFILNRDLLAQ--LYPSFA 182
            SL+W GH VHV++P         N FLN         LPH   L      Q  LY    
Sbjct: 186 SSLAWTGHLVHVAIPASRGEYVRWNNFLNV--------LPHPQGLGPLFTGQWNLYAQNP 245

Query: 183 EGATPFFTLNWSKYAEFLTFRGGLDPVTGGLWLTDIAHHHLAIAIL 185
           + ++  F  +       LT  GG  P T  LWLTD+AHHHLAIAIL
Sbjct: 246 DSSSHLFGTSQGSGTAILTLLGGFHPQTQSLWLTDMAHHHLAIAIL 283

The following BLAST results are available for this feature:

BLAST of Cla97C11G214405 vs. NCBI nr


Match Name	E-value	Identity	Description
TKS04886.1	2.2e-104	98.91	Photosystem I P700 chlorophyll a apoprotein A1 [Populus alba]	[more]
TYI09257.1	5.1e-101	91.41	hypothetical protein ES332_A09G059300v1 [Gossypium tomentosum]	[more]
YP_009751738.1	1.1e-100	85.98	photosystem I P700 apoprotein A1 [Herpetospermum pedunculosum] >QIT04471.1 photo...	[more]
YP_009751485.1	1.1e-100	85.98	photosystem I P700 apoprotein A1 [Thladiantha dubia] >QIT03966.1 photosystem I P...	[more]
YP_009752327.1	1.1e-100	85.98	photosystem I P700 apoprotein A1 [Bryonia marmorata] >QIT04301.1 photosystem I P...	[more]

BLAST of Cla97C11G214405 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QD89	5.7e-103	85.05	Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis sativus OX=3659 GN=psa...	[more]
Q9MTN8	7.4e-103	85.51	Photosystem I P700 chlorophyll a apoprotein A1 OS=Oenothera elata subsp. hookeri...	[more]
Q49KZ8	1.3e-102	85.05	Photosystem I P700 chlorophyll a apoprotein A1 OS=Eucalyptus globulus subsp. glo...	[more]
A0ZZ35	1.3e-102	85.05	Photosystem I P700 chlorophyll a apoprotein A1 OS=Gossypium barbadense OX=3634 G...	[more]
Q2L907	1.3e-102	85.05	Photosystem I P700 chlorophyll a apoprotein A1 OS=Gossypium hirsutum OX=3635 GN=...	[more]

BLAST of Cla97C11G214405 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A4V6A9C2	1.1e-104	98.91	Photosystem I P700 chlorophyll a apoprotein A1 OS=Populus alba OX=43335 GN=D5086...	[more]
A0A287RJF9	2.4e-104	98.37	Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1	[more]
A0A287U4Q9	2.4e-104	98.37	Photosystem I P700 chlorophyll a apoprotein A1 OS=Hordeum vulgare subsp. vulgare...	[more]
A0A0E0R1N4	1.3e-102	95.11	Photosystem I P700 chlorophyll a apoprotein A1 OS=Oryza rufipogon OX=4529 PE=3 S...	[more]
A0A453JEN0	2.2e-102	96.20	Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 S...	[more]

BLAST of Cla97C11G214405 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00350.1	2.0e-103	84.58	Photosystem I, PsaA/PsaB protein	[more]
ATCG00340.1	8.6e-30	35.40	Photosystem I, PsaA/PsaB protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001280	Photosystem I PsaA/PsaB	PRINTS	PR00257	PHOTSYSPSAAB	coord: 39..63 score: 63.41 coord: 174..185 score: 46.98 coord: 78..102 score: 76.39
IPR001280	Photosystem I PsaA/PsaB	PFAM	PF00223	PsaA_PsaB	coord: 26..184 e-value: 4.6E-75 score: 253.3
IPR036408	Photosystem I PsaA/PsaB superfamily	GENE3D	1.20.1130.10	Photosystem I PsaA/PsaB	coord: 27..185 e-value: 3.5E-77 score: 261.8
IPR036408	Photosystem I PsaA/PsaB superfamily	GENE3D	1.20.1130.10	Photosystem I PsaA/PsaB	coord: 1..26 e-value: 2.2E-6 score: 28.0
IPR036408	Photosystem I PsaA/PsaB superfamily	SUPERFAMILY	81558	Photosystem I subunits PsaA/PsaB	coord: 1..184
IPR006243	Photosystem I PsaA	PANTHER	PTHR30128:SF60	PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A1	coord: 26..184
None	No IPR available	PANTHER	PTHR30128	OUTER MEMBRANE PROTEIN, OMPA-RELATED	coord: 26..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C11G214405.1	Cla97C11G214405.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0015979	photosynthesis
biological_process	GO:0018298	protein-chromophore linkage
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0046872	metal ion binding