Cla97C09G179550 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C09G179550
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	apidaecins type 14-like isoform X1
Location	Cla97Chr09: 33077228 .. 33077713 (-)
RNA-Seq Expression	Cla97C09G179550
Synteny	Cla97C09G179550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAAGACAAGAATTTTATCAATTCTTCTCCTTTCATGCTTTCTTTTTCTCTTTCTCTCTCCTGGTATACTCTTCTCTCTCTTATTCTTTGTAATTCTTTTCTTCATGGATTTTTATTGTATTCATATCCTTATCTCTTCTCTGTTCAAACTTTTTTTTTTTTTCCAAAGGATTTGGAGTAGAAATGATGGGAACTGTGGAACAACATCCAGCCTCTCTTACTCAAGAAAAGGCAACAATTACAAATACTGTTCTTCTCTGTCTCTCTAATATTGTCTCCAATTTTTTTAAACACAAATGAACCGTACCGGAAATAATTAATTTGATGAAGATTATGTTTACGTTTGGGTATTGCAGGAAACGAGTGTAGGAAAATGGAGGAAGATGATGGTTCAATTAGAGGACGACTATCATGATCCAGGACCTAATAACCCAATGGCAATGGTTGCATATAATATGGCTCCTTCTCCTGCAACACCTTGA

mRNA sequence

ATGGATAAGACAAGAATTTTATCAATTCTTCTCCTTTCATGCTTTCTTTTTCTCTTTCTCTCTCCTGGATTTGGAGTAGAAATGATGGGAACTGTGGAACAACATCCAGCCTCTCTTACTCAAGAAAAGGCAACAATTACAAATACTGAAACGAGTGTAGGAAAATGGAGGAAGATGATGGTTCAATTAGAGGACGACTATCATGATCCAGGACCTAATAACCCAATGGCAATGGTTGCATATAATATGGCTCCTTCTCCTGCAACACCTTGA

Coding sequence (CDS)

ATGGATAAGACAAGAATTTTATCAATTCTTCTCCTTTCATGCTTTCTTTTTCTCTTTCTCTCTCCTGGATTTGGAGTAGAAATGATGGGAACTGTGGAACAACATCCAGCCTCTCTTACTCAAGAAAAGGCAACAATTACAAATACTGAAACGAGTGTAGGAAAATGGAGGAAGATGATGGTTCAATTAGAGGACGACTATCATGATCCAGGACCTAATAACCCAATGGCAATGGTTGCATATAATATGGCTCCTTCTCCTGCAACACCTTGA

Protein sequence

MDKTRILSILLLSCFLFLFLSPGFGVEMMGTVEQHPASLTQEKATITNTETSVGKWRKMMVQLEDDYHDPGPNNPMAMVAYNMAPSPATP

Homology

[Close]

BLAST of Cla97C09G179550 vs. NCBI nr
Match: XP_031741770.1 (probable calcium-binding protein CML47 [Cucumis sativus])

HSP 1 Score: 86.7 bits (213), Expect = 1.1e-13
Identity = 53/91 (58.24%), Postives = 64/91 (70.33%), Query Frame = 0


Query: 1  MDKTRILSILLLSCFLFLFLSPGFGVEMMGTVEQHPASLTQEKATITNTETSVGKWRKMM 60
          M+  RIL ILL+SCFLFLFLSPGFGVE M T+EQ  ASLT  +      E S GKWR +M
Sbjct: 1  MEDQRILPILLVSCFLFLFLSPGFGVETMRTMEQ-AASLTPHE-----KEMSGGKWRDVM 60

Query: 61 V-QLEDDYHDPGPNNPMAMVAYNMAPSPATP 91
          V QL +DYH PGPN P ++ A N A +P++P
Sbjct: 61 VDQLLEDYHGPGPNKPRSITAPNSA-TPSSP 84

[Close]

BLAST of Cla97C09G179550 vs. NCBI nr
Match: KGN52469.1 (hypothetical protein Csa_008670 [Cucumis sativus])

HSP 1 Score: 84.3 bits (207), Expect = 5.7e-13
Identity = 53/91 (58.24%), Postives = 62/91 (68.13%), Query Frame = 0


Query: 1  MDKTRILSILLLSCFLFLFLSPGFGVEMMGTVEQHPASLTQEKATITNTETSVGKWRKMM 60
          M+  RIL ILL+SCFLFLFLSPGFGVE M T+EQ  ASLT  +      E S GKWR +M
Sbjct: 1  MEDQRILPILLVSCFLFLFLSPGFGVETMRTMEQ-AASLTPHE-----KEMSGGKWRDVM 60

Query: 61 V-QLEDDYHDPGPNNPMAMVAYNMAPSPATP 91
          V QL +DYH PGPN P ++     AP+ ATP
Sbjct: 61 VDQLLEDYHGPGPNKPRSIT----APNSATP 81

[Close]

BLAST of Cla97C09G179550 vs. NCBI nr
Match: KAA0039469.1 (hypothetical protein E6C27_scaffold64G002790 [Cucumis melo var. makuwa] >TYK00659.1 hypothetical protein E5676_scaffold169G002810 [Cucumis melo var. makuwa])

HSP 1 Score: 58.2 bits (139), Expect = 4.4e-05
Identity = 35/62 (56.45%), Postives = 40/62 (64.52%), Query Frame = 0


Query: 29 MGTVEQHPASLTQEKATITNTETSVGKWRKMMVQLEDDYHDPGPNNPMAMVAYNMAPSPA 88
          MGT+EQ  ASLT  +      E S GKWR +MVQL +DYH PGPN P A  +YNMA   A
Sbjct: 1  MGTMEQ-AASLTPHE-----KEISGGKWRDVMVQLREDYHGPGPNKPKA--SYNMAAPSA 54

Query: 89 TP 91
          TP
Sbjct: 61 TP 54

[Close]

BLAST of Cla97C09G179550 vs. NCBI nr
Match: XP_022133549.1 (apidaecins type 14-like isoform X1 [Momordica charantia])

HSP 1 Score: 54.3 bits (129), Expect = 6.3e-04
Identity = 35/75 (46.67%), Postives = 45/75 (60.00%), Query Frame = 0


Query: 1  MDKTRILSILLLSCFLFLFLSPGFGVEMMGTVEQHPASLTQEKATITNTETSVGKWRKMM 60
          MD   I S+LL+S  L LF S GFGV++MG+ E HP S+T  K      + S+ K RK  
Sbjct: 1  MDSLTIFSLLLISSLLLLFFSHGFGVDVMGSGE-HPESMTPLK------QESIQKSRK-- 60

Query: 61 VQLEDDYHDPGPNNP 76
          V    +YHDP PN+P
Sbjct: 61 VNEVANYHDPAPNHP 66

[Close]

BLAST of Cla97C09G179550 vs. ExPASy TrEMBL
Match: A0A0A0KU89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636610 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.8e-13
Identity = 53/91 (58.24%), Postives = 62/91 (68.13%), Query Frame = 0


Query: 1  MDKTRILSILLLSCFLFLFLSPGFGVEMMGTVEQHPASLTQEKATITNTETSVGKWRKMM 60
          M+  RIL ILL+SCFLFLFLSPGFGVE M T+EQ  ASLT  +      E S GKWR +M
Sbjct: 1  MEDQRILPILLVSCFLFLFLSPGFGVETMRTMEQ-AASLTPHE-----KEMSGGKWRDVM 60

Query: 61 V-QLEDDYHDPGPNNPMAMVAYNMAPSPATP 91
          V QL +DYH PGPN P ++     AP+ ATP
Sbjct: 61 VDQLLEDYHGPGPNKPRSIT----APNSATP 81

[Close]

BLAST of Cla97C09G179550 vs. ExPASy TrEMBL
Match: A0A5A7TDZ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002810 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.1e-05
Identity = 35/62 (56.45%), Postives = 40/62 (64.52%), Query Frame = 0


Query: 29 MGTVEQHPASLTQEKATITNTETSVGKWRKMMVQLEDDYHDPGPNNPMAMVAYNMAPSPA 88
          MGT+EQ  ASLT  +      E S GKWR +MVQL +DYH PGPN P A  +YNMA   A
Sbjct: 1  MGTMEQ-AASLTPHE-----KEISGGKWRDVMVQLREDYHGPGPNKPKA--SYNMAAPSA 54

Query: 89 TP 91
          TP
Sbjct: 61 TP 54

[Close]

BLAST of Cla97C09G179550 vs. ExPASy TrEMBL
Match: A0A6J1BWA5 (apidaecins type 14-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006109 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.1e-04
Identity = 35/75 (46.67%), Postives = 45/75 (60.00%), Query Frame = 0


Query: 1  MDKTRILSILLLSCFLFLFLSPGFGVEMMGTVEQHPASLTQEKATITNTETSVGKWRKMM 60
          MD   I S+LL+S  L LF S GFGV++MG+ E HP S+T  K      + S+ K RK  
Sbjct: 1  MDSLTIFSLLLISSLLLLFFSHGFGVDVMGSGE-HPESMTPLK------QESIQKSRK-- 60

Query: 61 VQLEDDYHDPGPNNP 76
          V    +YHDP PN+P
Sbjct: 61 VNEVANYHDPAPNHP 66

[Close]

BLAST of Cla97C09G179550 vs. ExPASy TrEMBL
Match: A0A6J1BVK3 (apidaecins type 73-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006109 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 5.2e-04
Identity = 35/75 (46.67%), Postives = 44/75 (58.67%), Query Frame = 0


Query: 1  MDKTRILSILLLSCFLFLFLSPGFGVEMMGTVEQHPASLTQEKATITNTETSVGKWRKMM 60
          MD   I S+LL+S  L LF S GFGV++MG+ E HP S+T  K        S+ K RK  
Sbjct: 1  MDSLTIFSLLLISSLLLLFFSHGFGVDVMGSGE-HPESMTPLK-------ESIQKSRK-- 60

Query: 61 VQLEDDYHDPGPNNP 76
          V    +YHDP PN+P
Sbjct: 61 VNEVANYHDPAPNHP 65

The following BLAST results are available for this feature:

BLAST of Cla97C09G179550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031741770.1	1.1e-13	58.24	probable calcium-binding protein CML47 [Cucumis sativus]	[more]
KGN52469.1	5.7e-13	58.24	hypothetical protein Csa_008670 [Cucumis sativus]	[more]
KAA0039469.1	4.4e-05	56.45	hypothetical protein E6C27_scaffold64G002790 [Cucumis melo var. makuwa] >TYK0065...	[more]
XP_022133549.1	6.3e-04	46.67	apidaecins type 14-like isoform X1 [Momordica charantia]	[more]

BLAST of Cla97C09G179550 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C09G179550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KU89	2.8e-13	58.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636610 PE=4 SV=1	[more]
A0A5A7TDZ0	2.1e-05	56.45	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1BWA5	3.1e-04	46.67	apidaecins type 14-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC11100610...	[more]
A0A6J1BVK3	5.2e-04	46.67	apidaecins type 73-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC11100610...	[more]

BLAST of Cla97C09G179550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C09G179550.1	Cla97C09G179550.1	mRNA