Cla97C09G168040 (gene) Watermelon (97103) v2.5

Overview
NameCla97C09G168040
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr09: 4638468 .. 4638770 (+)
RNA-Seq ExpressionCla97C09G168040
SyntenyCla97C09G168040
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCTTTCTGGCAGCTGGAGGAATACCATTACTTCGTCGAGCGAACAAGAACAAAAGCATACCGACCACCGCAACCACCACTTCCCCTTAACAAAAAGCTCCCCTACGACGGCGAGATTCATCACCTCCACCGGTATAAAAACACCTGTGATCATACTCTGTTCTTCCAGTCCTCTGTCAATTCCGCGGCGGCCACGACCATTGATAGCAAAGAGGCCGCCGAGAGGTACGGCGGAATTTCCATCATCGATTACCGGACCAAGAAACCTGCGGCGGCGGATTTTCGATTTCGCATTTAA

mRNA sequence

ATGGCAGCTTTCTGGCAGCTGGAGGAATACCATTACTTCGTCGAGCGAACAAGAACAAAAGCATACCGACCACCGCAACCACCACTTCCCCTTAACAAAAAGCTCCCCTACGACGGCGAGATTCATCACCTCCACCGGTATAAAAACACCTGTGATCATACTCTGTTCTTCCAGTCCTCTGTCAATTCCGCGGCGGCCACGACCATTGATAGCAAAGAGGCCGCCGAGAGGTACGGCGGAATTTCCATCATCGATTACCGGACCAAGAAACCTGCGGCGGCGGATTTTCGATTTCGCATTTAA

Coding sequence (CDS)

ATGGCAGCTTTCTGGCAGCTGGAGGAATACCATTACTTCGTCGAGCGAACAAGAACAAAAGCATACCGACCACCGCAACCACCACTTCCCCTTAACAAAAAGCTCCCCTACGACGGCGAGATTCATCACCTCCACCGGTATAAAAACACCTGTGATCATACTCTGTTCTTCCAGTCCTCTGTCAATTCCGCGGCGGCCACGACCATTGATAGCAAAGAGGCCGCCGAGAGGTACGGCGGAATTTCCATCATCGATTACCGGACCAAGAAACCTGCGGCGGCGGATTTTCGATTTCGCATTTAA

Protein sequence

MAAFWQLEEYHYFVERTRTKAYRPPQPPLPLNKKLPYDGEIHHLHRYKNTCDHTLFFQSSVNSAAATTIDSKEAAERYGGISIIDYRTKKPAAADFRFRI
Homology
BLAST of Cla97C09G168040 vs. NCBI nr
Match: KAG6593213.1 (hypothetical protein SDJN03_12689, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 58.2 bits (139), Expect = 4.9e-05
Identity = 42/83 (50.60%), Postives = 48/83 (57.83%), Query Frame = 0

Query: 1  MAAFWQLEE-YHYFVERTRTKAYRPPQPPLPLNKKLPYDGEIHHLHRYKNTCDHTLFFQS 60
          MAAF + EE Y+YFVE+ RTK  RP Q       K+  DGE+HHL R  N  DH LFF  
Sbjct: 1  MAAFRKREENYYYFVEQ-RTKISRPLQ-------KVVNDGELHHLPRRTNNFDHDLFFDY 60

Query: 61 SVNSAAA---TTIDSKEAAERYG 80
             S      +TIDSKEAAE  G
Sbjct: 61 PAPSRVGEVRSTIDSKEAAESAG 75

BLAST of Cla97C09G168040 vs. ExPASy TrEMBL
Match: A0A0A0K673 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G404810 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.6e-25
Identity = 66/107 (61.68%), Postives = 77/107 (71.96%), Query Frame = 0

Query: 1   MAAFWQLEEYHYF-VERTRTKAYRPPQPPLPLNKKLPYDGEIHHLHRYKNTCDHTLFFQS 60
           MAAF++ EEYHYF  ERTR    R PQPP PL+KK PY+GEI HL R KN CDHTL F+ 
Sbjct: 1   MAAFFKKEEYHYFSFERTRAITSRSPQPPPPLHKKSPYEGEIQHLRRSKNNCDHTLIFEC 60

Query: 61  SVNSAAA-------TTIDSKEAAERYGGISIIDYRTKKPAAADFRFR 100
           SVNSAAA       TTI+SK+AA+ YGGI+I+D+ TKKPA     FR
Sbjct: 61  SVNSAAAPNVREAKTTINSKQAAQMYGGINIVDFWTKKPATTTGEFR 107

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6593213.14.9e-0550.60hypothetical protein SDJN03_12689, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K6731.6e-2561.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G404810 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C09G168040.1Cla97C09G168040.1mRNA