Cla97C09G161980 (gene) Watermelon (97103) v2.5

Overview
NameCla97C09G161980
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr09: 84516 .. 84894 (+)
RNA-Seq ExpressionCla97C09G161980
SyntenyCla97C09G161980
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCTCAGAGGTGAAACAAAATCCGCATGAAAACCAACAAAAAAAATATTAACAGTAGCTCTCAATAAAAGTACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATGGTTTCCTCTGCTCTTCTTTCATTAAACCATACAAAGCTGAACCGTATGCTGTAGAAATCAGGTTCCACTCCGACCTCAAATCCATTCCTGTAGCAACCCGCTTACCCTTTTTCTTTTTCTCTTATCAATACGGCTTCTATGGCGTTCGTTTTGAGTTTACTTGGTTCGTTCTGAATCCCCACAAGATGTTTTGGAGATTCGGTGTGGTTCTAGTCAACCAGCACCATGAGGATCGGCGACACATGGCGATTTCCGAGGCCTAA

mRNA sequence

ATGGAAGCTCAGAGGTTCCACTCCGACCTCAAATCCATTCCTGTAGCAACCCGCTTACCCTTTTTCTTTTTCTCTTATCAATACGGCTTCTATGGCGTTCGTTTTGAGTTTACTTGGTTCGTTCTGAATCCCCACAAGATGTTTTGGAGATTCGGTGTGGTTCTAGTCAACCAGCACCATGAGGATCGGCGACACATGGCGATTTCCGAGGCCTAA

Coding sequence (CDS)

ATGGAAGCTCAGAGGTTCCACTCCGACCTCAAATCCATTCCTGTAGCAACCCGCTTACCCTTTTTCTTTTTCTCTTATCAATACGGCTTCTATGGCGTTCGTTTTGAGTTTACTTGGTTCGTTCTGAATCCCCACAAGATGTTTTGGAGATTCGGTGTGGTTCTAGTCAACCAGCACCATGAGGATCGGCGACACATGGCGATTTCCGAGGCCTAA

Protein sequence

MEAQRFHSDLKSIPVATRLPFFFFSYQYGFYGVRFEFTWFVLNPHKMFWRFGVVLVNQHHEDRRHMAISEA
Homology
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BLAST of Cla97C09G161980 vs. NCBI nr
Match: KAG7025828.1 (hypothetical protein SDJN02_12326, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 58.2 bits (139), Expect = 3.4e-05
Identity = 28/37 (75.68%), Postives = 30/37 (81.08%), Query Frame = 0 

Query: 30 FYGVR-FEFTWFVLNPHKMFWRFGVVLVNQHHEDRRH 66
          FYGVR  E    VLNPHKMFWR GVVLV+QHHEDRR+
Sbjct: 2  FYGVRSIELCLLVLNPHKMFWRLGVVLVDQHHEDRRY 38

The following BLAST results are available for this feature:
BLAST of Cla97C09G161980 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7025828.13.4e-0575.68hypothetical protein SDJN02_12326, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Cla97C09G161980 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C09G161980 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C09G161980 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C09G161980.1Cla97C09G161980.1mRNA