Cla97C06G127040 (gene) Watermelon (97103) v2.5

Overview
NameCla97C06G127040
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionNAC domain-containing protein
LocationCla97Chr06: 28721166 .. 28721582 (+)
RNA-Seq ExpressionCla97C06G127040
SyntenyCla97C06G127040
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGACCAAGACATATCCTTCCTCACCACCAGAAGAAGAAATCTCATGTTATTAGGAAAGTTGGTTCTAATAGGGCCACTTGGAGTGGTGAGAACAAAGCAAATAAGGTGTTTTCTTCTGACAACAATGACTTGATCAGAAGTGTTAAACAGTTCCATTATGAAAACTACAAAGGTGAAGACTGTTGATGATAATCACTCTTGGATCATGTATGAGTACACCCATATCTTACTTTTGTGTAACAATAAGATAGTACATGATTCATTCGTACTTTGTATGCTCCGAAAAAGAATTTTGAGACAAGAAAAAAATGACATTATCCACAATAATGAAAATGAACATTGCATCGATGAGGTTAATTCAACTATTTCCACCTCAGGTTCAGGGGAATATCCATCAACCTTTGATGATTGA

mRNA sequence

ATGGGTGACCAAGACATATCCTTCCTCACCACCAGAAGAAGAAATCTCATGTTATTAGGAAAGTTGGTTCTAATAGGGCCACTTGGAGTGGTGAGAACAAAGCAAATAAGTTCCATTATGAAAACTACAAAGGTGAAGACTGTTGATGATAATCACTCTTGGATCATGTATGAGTACACCCATATCTTACTTTTGTGTAACAATAAGATAGTACATGATTCATTCGTACTTTGTATGCTCCGAAAAAGAATTTTGAGACAAGAAAAAAATGACATTATCCACAATAATGAAAATGAACATTGCATCGATGAGGTTAATTCAACTATTTCCACCTCAGGTTCAGGGGAATATCCATCAACCTTTGATGATTGA

Coding sequence (CDS)

ATGGGTGACCAAGACATATCCTTCCTCACCACCAGAAGAAGAAATCTCATGTTATTAGGAAAGTTGGTTCTAATAGGGCCACTTGGAGTGGTGAGAACAAAGCAAATAAGTTCCATTATGAAAACTACAAAGGTGAAGACTGTTGATGATAATCACTCTTGGATCATGTATGAGTACACCCATATCTTACTTTTGTGTAACAATAAGATAGTACATGATTCATTCGTACTTTGTATGCTCCGAAAAAGAATTTTGAGACAAGAAAAAAATGACATTATCCACAATAATGAAAATGAACATTGCATCGATGAGGTTAATTCAACTATTTCCACCTCAGGTTCAGGGGAATATCCATCAACCTTTGATGATTGA

Protein sequence

MGDQDISFLTTRRRNLMLLGKLVLIGPLGVVRTKQISSIMKTTKVKTVDDNHSWIMYEYTHILLLCNNKIVHDSFVLCMLRKRILRQEKNDIIHNNENEHCIDEVNSTISTSGSGEYPSTFDD
Homology
BLAST of Cla97C06G127040 vs. NCBI nr
Match: KAE8645670.1 (hypothetical protein Csa_020187 [Cucumis sativus])

HSP 1 Score: 62.4 bits (150), Expect = 3.2e-06
Identity = 31/64 (48.44%), Postives = 42/64 (65.62%), Query Frame = 0

Query: 49  DDNHSWIMYEYTHILLLCNNKIVHDSFVLCMLRKRILRQEKNDIIHNNENEHCIDEVNST 108
           ++N+SWIMYEYT    L    +VHDSFVLCMLRK+IL+Q K       +   C+D  N+T
Sbjct: 88  NNNYSWIMYEYTLHPNLVPEGVVHDSFVLCMLRKKILKQNKRAFPTTKQTSSCLDWPNTT 147

Query: 109 ISTS 113
            +T+
Sbjct: 148 TTTT 151

BLAST of Cla97C06G127040 vs. NCBI nr
Match: KAE8653009.1 (hypothetical protein Csa_004551 [Cucumis sativus])

HSP 1 Score: 61.6 bits (148), Expect = 5.4e-06
Identity = 31/64 (48.44%), Postives = 43/64 (67.19%), Query Frame = 0

Query: 49  DDNHSWIMYEYTHILLLCNNKIVHDSFVLCMLRKRILRQEKNDIIHNNENEHCIDEVNST 108
           ++N+SWIMYEYT    L    +VHDSFVLCMLRK+IL+Q+K       +   C+D  N+T
Sbjct: 117 NNNYSWIMYEYTLHPNLVPEGVVHDSFVLCMLRKKILKQDKRAFSAIKQTSSCLDWPNTT 176

Query: 109 ISTS 113
            +T+
Sbjct: 177 KATT 180

BLAST of Cla97C06G127040 vs. NCBI nr
Match: XP_031742243.1 (NAC transcription factor 29-like [Cucumis sativus])

HSP 1 Score: 61.6 bits (148), Expect = 5.4e-06
Identity = 31/64 (48.44%), Postives = 43/64 (67.19%), Query Frame = 0

Query: 49  DDNHSWIMYEYTHILLLCNNKIVHDSFVLCMLRKRILRQEKNDIIHNNENEHCIDEVNST 108
           ++N+SWIMYEYT    L    +VHDSFVLCMLRK+IL+Q+K       +   C+D  N+T
Sbjct: 124 NNNYSWIMYEYTLHPNLVPEGVVHDSFVLCMLRKKILKQDKRAFSAIKQTSSCLDWPNTT 183

Query: 109 ISTS 113
            +T+
Sbjct: 184 KATT 187

BLAST of Cla97C06G127040 vs. NCBI nr
Match: KAA0057812.1 (NAC domain-containing protein 105-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 57.0 bits (136), Expect = 1.3e-04
Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 0

Query: 41  KTTKVKTVDDNHSWIMYEYTHILLLCNNKIVHDSFVLCMLRKRILRQEK 90
           K TKV   ++ +SWIMYEYT    L    ++HDSFVLCMLRK+IL+Q K
Sbjct: 116 KMTKVDDCNNIYSWIMYEYTLQPNLVPQGVIHDSFVLCMLRKKILKQHK 164

BLAST of Cla97C06G127040 vs. NCBI nr
Match: TYJ98496.1 (NAC domain-containing protein 105-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 57.0 bits (136), Expect = 1.3e-04
Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 0

Query: 41  KTTKVKTVDDNHSWIMYEYTHILLLCNNKIVHDSFVLCMLRKRILRQEK 90
           K TKV   ++ +SWIMYEYT    L    ++HDSFVLCMLRK+IL+Q K
Sbjct: 116 KMTKVDDCNNIYSWIMYEYTLQPNLVPQGVIHDSFVLCMLRKKILKQHK 164

BLAST of Cla97C06G127040 vs. ExPASy TrEMBL
Match: A0A5A7UPM7 (NAC domain-containing protein 105-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00950 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 6.4e-05
Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 0

Query: 41  KTTKVKTVDDNHSWIMYEYTHILLLCNNKIVHDSFVLCMLRKRILRQEK 90
           K TKV   ++ +SWIMYEYT    L    ++HDSFVLCMLRK+IL+Q K
Sbjct: 116 KMTKVDDCNNIYSWIMYEYTLQPNLVPQGVIHDSFVLCMLRKKILKQHK 164

BLAST of Cla97C06G127040 vs. ExPASy TrEMBL
Match: A0A5D3BHG6 (NAC domain-containing protein 105-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00980 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 6.4e-05
Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 0

Query: 41  KTTKVKTVDDNHSWIMYEYTHILLLCNNKIVHDSFVLCMLRKRILRQEK 90
           K TKV   ++ +SWIMYEYT    L    ++HDSFVLCMLRK+IL+Q K
Sbjct: 116 KMTKVDDCNNIYSWIMYEYTLQPNLVPQGVIHDSFVLCMLRKKILKQHK 164

BLAST of Cla97C06G127040 vs. ExPASy TrEMBL
Match: A0A0A0L807 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G110040 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.1e-04
Identity = 30/64 (46.88%), Postives = 41/64 (64.06%), Query Frame = 0

Query: 49  DDNHSWIMYEYTHILLLCNNKIVHDSFVLCMLRKRILRQEKNDIIHNNENEHCIDEVNST 108
           ++N+SWIMYEYT    L    +VH SFVL MLRK+IL+Q+K       +   CID  N+T
Sbjct: 126 NNNYSWIMYEYTLHPNLVPEGVVHHSFVLFMLRKKILKQDKRAFSATKQTFSCIDWPNTT 185

Query: 109 ISTS 113
            +T+
Sbjct: 186 TATT 189

BLAST of Cla97C06G127040 vs. ExPASy TrEMBL
Match: A0A0A0LWA5 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G224380 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.2e-04
Identity = 29/64 (45.31%), Postives = 41/64 (64.06%), Query Frame = 0

Query: 49  DDNHSWIMYEYTHILLLCNNKIVHDSFVLCMLRKRILRQEKNDIIHNNENEHCIDEVNST 108
           ++N+SWIMYEYT    L    +VH SFVL MLRK+IL+Q+K       +   C+D  N+T
Sbjct: 117 NNNYSWIMYEYTLHPNLVPEGVVHHSFVLFMLRKKILKQDKRAFSAIKQTSSCLDWPNTT 176

Query: 109 ISTS 113
            +T+
Sbjct: 177 KATT 180

BLAST of Cla97C06G127040 vs. ExPASy TrEMBL
Match: A0A6J1F2C3 (NAC domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111441766 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 9.3e-04
Identity = 35/109 (32.11%), Postives = 58/109 (53.21%), Query Frame = 0

Query: 1   MGDQDISFLTT-RRRNLMLLGKLVLIGPL--GVVRTKQISSIMKTTKVKTV--------- 60
           M D+DI F TT +++   ++ K+ L G    G  +  ++ S      + T+         
Sbjct: 58  MEDKDIYFFTTLKKKKSRIIRKVGLNGGTWSGESKGHKVFSSANNAPIGTIKRFHYETSG 117

Query: 61  -----DDNHSWIMYEYTHILLLCNNKIVHDSFVLCMLRKRILRQEKNDI 93
                DD+ SWIM+EYT    +  N  VHDS+V+C++RKRIL++ +N +
Sbjct: 118 GVNANDDDCSWIMHEYTLDPTVLTNGFVHDSYVVCLIRKRILKKVRNTV 166

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8645670.13.2e-0648.44hypothetical protein Csa_020187 [Cucumis sativus][more]
KAE8653009.15.4e-0648.44hypothetical protein Csa_004551 [Cucumis sativus][more]
XP_031742243.15.4e-0648.44NAC transcription factor 29-like [Cucumis sativus][more]
KAA0057812.11.3e-0457.14NAC domain-containing protein 105-like protein [Cucumis melo var. makuwa][more]
TYJ98496.11.3e-0457.14NAC domain-containing protein 105-like protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UPM76.4e-0557.14NAC domain-containing protein 105-like protein OS=Cucumis melo var. makuwa OX=11... [more]
A0A5D3BHG66.4e-0557.14NAC domain-containing protein 105-like protein OS=Cucumis melo var. makuwa OX=11... [more]
A0A0A0L8071.1e-0446.88NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G110040 PE=4 SV... [more]
A0A0A0LWA53.2e-0445.31NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G224380 PE=4 SV... [more]
A0A6J1F2C39.3e-0432.11NAC domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111441... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C06G127040.1Cla97C06G127040.1mRNA