Cla97C06G125160 (gene) Watermelon (97103) v2.5

Overview
NameCla97C06G125160
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionGlycine-rich RNA-binding protein 2
LocationCla97Chr06: 27219425 .. 27221732 (+)
RNA-Seq ExpressionCla97C06G125160
SyntenyCla97C06G125160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTACTTAATTTGTCGAAAACCGAAGCGTGTAACTTCGAGTCATTTTTGCCTCTGATACCTTGGTTGGTTGATTATTCGTCATTTATTTCTTTCAGGCTGCTTCAAAATGGCTTTCCTAAGTAAGGTTGGAAATATACTGAGGCAGGGTGCAAATAAGAGGATTGGATTAGATTTGCAGCCTTCCGGTTTGTCTATCTGTCAAGCTGTACGATGGATGTCTTCCATGCAAAGTTCAAAACTTTTTATCGGAGGTTCTCTGAGAATGCTTTGTTATTCTTGTTATTTTTTTCCTTTAAAGAACGTGTATACGCCAATTTCTTTGTCCTTATCATGTGCTTGTATGTACGTTTGGCAGGAATTTCATACAGCACTGATGATCAAAGTCTCAGGGAAGCCTTTTCTAAATATGGGGAAGTAATCGAAGGTATATCACCCAACTCATTTACAACGAGTGTTGGAGGTTATCTTTGAAGTATATTTGTTTTCAATTTTTATCTTATCTATTCTATATGTAACATAAATGAAATATGGAATAAACGAGCTTTTGGAACCCATATGGTCAAATCTGCTCGAGCAATTATGTCTCTTTTAAATATTTTCTGAAATAAGGCCCAGCAGGTGGCTTGAGGTAGTGGTGTCGCTTGATTCTGCTTGTTGTGCTAGCGGATTGTGAAGTTTTAGTTATAAATGTTGGTTTCCTTGTTTACCCTTCTTTTCTTTGCCATGGCGATAGCTAGGGTCATTGTAGACCGCGAAACTGGAAGATCCAGAGGATTTGGATTTGTGACTTACACCTCTAGTGAGGAGGCCTCTAGTGCCATCCAGGCATTGGATGGACAGGTAATGATTCTGCTATTGACTCATTGAGATTAAAAAGGACAAAACGTTGTGTTATATTCATACGCTGCAATATACTGTAGAATTAATGCATCATCGCTCATAAAATGCTTGATGTCCGTTGTCTGCGTTCTTTTCTGTTAGATGATCCTGCCACTGTGTTACTTGTATGAAGAAGACTATCTAGTGAATGTCTTTATGTTAATTGATCTTATGTAAATGTCTTCATGTAATACCTTAAATCATCATATTTCCTGCAGCAAATATTAGTATGATGCAGTGATATTGAGATATAGTAGCCCATTCTCTGTACGGTCAACAGTTAATATGTGTACTAATGTAAAGTGTTTTAGGGGTTGTCATGTGTGATAAAGGTGAGTTGTATGTTGGAGGTTTGTCCCAAATTTCGTTCATGTTATAGCACAGCCGTTCTACTTATATTCTCAACTAGCTTGTATGTTATGGTACTAAATTTCCATTTAGATTTTTGTAGGAAAATAATTATTTAAAGCGATATGAGTGATTAAGATGTGTGGAATTTGGAGGCTTGTTCCACTTTCGAATACATGAGAACAAATCATATTTAAACTGACTGACTTATTATCGAGATTCATTCTTCATAATTTAATTTGGTCCTCAATATTTGCTAAAAAGCTCAATGTCTCAGGTTAATTATGTTTTTTTTTTTCCTTCTTTAAACAGGACCTTCATGGTCGTCAAGTGAGAGTGAATTATGCTAATGATAGATCTCGTGGTTTCGGTGGCGGGGGCGGTGGTTATGGTGGCGGGGGCTATGGTGGTGGGGGCGGTGGTTATGGTGGCGGGGGCTATGGTGGTGGGGGCGGTGGTTATGGTGGCGGCGGGGCTGGAGGTTATGGTGGCGGCGGGAGTGGAGGAGGTTATGGTGATGGTAGTGGTGGATATGGTTCCGGAGGCAACTATTCGAGCAGTTTTGGCGGTGGTAGCCAAGGAAATTATAGTAACGATTTTGCCAGTGCCAACCGTGGAAGTGTTGCAGGTGGTGGTGGCTTTGGTGGGAATGATGCTGGTGGCTACGACGCTGCTAGCAATTTTGCTACTGGAAACACATATGACAGTGGAACTAATGCTGGTTTTGGTAACGTCAGTGGCGGCGGTGGCGACTATTTTGCCAACAGTGGGTCCGATGCAAGCTCTGGGTTTGGAGGATACACTGGCGGGGAACAATTTGGCAGCAACGAAACAAACACCATGGATGCATCTGGAGATCAAGGCCAGGAGGAGCCACTGGAAGGAAATGATAGGGACGAAGACGACGCAGATGACTTTGCTAAAAGAGCCTGATAAATTATATGCATTATCCATAGTTAACTTCGTCCAGCATTTTTTTGTTATGGCCATGTAGTTTTCCCCTACATTCTATACTGAACTTCGTCTTTGTTTGTATGTTGGACTTGCTTCAATGGCTGTGAATTTTTCTATGCACTA

mRNA sequence

ATGGGCTGCTTCAAAATGGCTTTCCTAAGTAAGGTTGGAAATATACTGAGGCAGGGTGCAAATAAGAGGATTGGATTAGATTTGCAGCCTTCCGGTTTGTCTATCTGTCAAGCTGTACGATGGATGTCTTCCATGCAAAGTTCAAAACTTTTTATCGGAGGAATTTCATACAGCACTGATGATCAAAGTCTCAGGGAAGCCTTTTCTAAATATGGGGAAGTAATCGAAGCTAGGGTCATTGTAGACCGCGAAACTGGAAGATCCAGAGGATTTGGATTTGTGACTTACACCTCTAGTGAGGAGGCCTCTAGTGCCATCCAGGCATTGGATGGACAGGACCTTCATGGTCGTCAAGTGAGAGTGAATTATGCTAATGATAGATCTCGTGGTTTCGGTGGCGGGGGCGGTGGTTATGGTGGCGGGGGCTATGGTGGTGGGGGCGGTGGTTATGGTGGCGGGGGCTATGGTGGTGGGGGCGGTGGTTATGGTGGCGGCGGGGCTGGAGGTTATGGTGGCGGCGGGAGTGGAGGAGGTTATGGTGATGGTAGTGGTGGATATGGTTCCGGAGGCAACTATTCGAGCAGTTTTGGCGGTGGTAGCCAAGGAAATTATAGTAACGATTTTGCCAGTGCCAACCGTGGAAGTGTTGCAGGTGGTGGTGGCTTTGGTGGGAATGATGCTGGTGGCTACGACGCTGCTAGCAATTTTGCTACTGGAAACACATATGACAGTGGAACTAATGCTGGTTTTGGTAACGTCAGTGGCGGCGGTGGCGACTATTTTGCCAACAGTGGGTCCGATGCAAGCTCTGGGTTTGGAGGATACACTGGCGGGGAACAATTTGGCAGCAACGAAACAAACACCATGGATGCATCTGGAGATCAAGGCCAGGAGGAGCCACTGGAAGGAAATGATAGGGACGAAGACGACGCAGATGACTTTGCTAAAAGAGCCTGATAAATTATATGCATTATCCATAGTTAACTTCGTCCAGCATTTTTTTGTTATGGCCATGTAGTTTTCCCCTACATTCTATACTGAACTTCGTCTTTGTTTGTATGTTGGACTTGCTTCAATGGCTGTGAATTTTTCTATGCACTA

Coding sequence (CDS)

ATGGGCTGCTTCAAAATGGCTTTCCTAAGTAAGGTTGGAAATATACTGAGGCAGGGTGCAAATAAGAGGATTGGATTAGATTTGCAGCCTTCCGGTTTGTCTATCTGTCAAGCTGTACGATGGATGTCTTCCATGCAAAGTTCAAAACTTTTTATCGGAGGAATTTCATACAGCACTGATGATCAAAGTCTCAGGGAAGCCTTTTCTAAATATGGGGAAGTAATCGAAGCTAGGGTCATTGTAGACCGCGAAACTGGAAGATCCAGAGGATTTGGATTTGTGACTTACACCTCTAGTGAGGAGGCCTCTAGTGCCATCCAGGCATTGGATGGACAGGACCTTCATGGTCGTCAAGTGAGAGTGAATTATGCTAATGATAGATCTCGTGGTTTCGGTGGCGGGGGCGGTGGTTATGGTGGCGGGGGCTATGGTGGTGGGGGCGGTGGTTATGGTGGCGGGGGCTATGGTGGTGGGGGCGGTGGTTATGGTGGCGGCGGGGCTGGAGGTTATGGTGGCGGCGGGAGTGGAGGAGGTTATGGTGATGGTAGTGGTGGATATGGTTCCGGAGGCAACTATTCGAGCAGTTTTGGCGGTGGTAGCCAAGGAAATTATAGTAACGATTTTGCCAGTGCCAACCGTGGAAGTGTTGCAGGTGGTGGTGGCTTTGGTGGGAATGATGCTGGTGGCTACGACGCTGCTAGCAATTTTGCTACTGGAAACACATATGACAGTGGAACTAATGCTGGTTTTGGTAACGTCAGTGGCGGCGGTGGCGACTATTTTGCCAACAGTGGGTCCGATGCAAGCTCTGGGTTTGGAGGATACACTGGCGGGGAACAATTTGGCAGCAACGAAACAAACACCATGGATGCATCTGGAGATCAAGGCCAGGAGGAGCCACTGGAAGGAAATGATAGGGACGAAGACGACGCAGATGACTTTGCTAAAAGAGCCTGA

Protein sequence

MGCFKMAFLSKVGNILRQGANKRIGLDLQPSGLSICQAVRWMSSMQSSKLFIGGISYSTDDQSLREAFSKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRQVRVNYANDRSRGFGGGGGGYGGGGYGGGGGGYGGGGYGGGGGGYGGGGAGGYGGGGSGGGYGDGSGGYGSGGNYSSSFGGGSQGNYSNDFASANRGSVAGGGGFGGNDAGGYDAASNFATGNTYDSGTNAGFGNVSGGGGDYFANSGSDASSGFGGYTGGEQFGSNETNTMDASGDQGQEEPLEGNDRDEDDADDFAKRA
Homology
BLAST of Cla97C06G125160 vs. NCBI nr
Match: XP_038878732.1 (glycine-rich RNA-binding protein 3, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 409.1 bits (1050), Expect = 3.6e-110
Identity = 275/331 (83.08%), Postives = 286/331 (86.40%), Query Frame = 0

Query: 6   MAFLSKVGNILRQGANKRIGLDLQPSGLSICQAVRWMSSMQSSKLFIGGISYSTDDQSLR 65
           MAFL K GNILRQGANKRIGLDLQ S LSICQAVRWMSSMQSSKLF+GGISY+TDDQSLR
Sbjct: 1   MAFLGKFGNILRQGANKRIGLDLQASSLSICQAVRWMSSMQSSKLFVGGISYNTDDQSLR 60

Query: 66  EAFSKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRQVRVNYAN 125
           EAF+KYGEV+EAR+IVDRETGRSRGFGFVT+TSSEEASSAIQALDGQDLHGR+VRVNYAN
Sbjct: 61  EAFAKYGEVLEARIIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 126 DRSRGFGGGGGGYGGGGYGGGGGGYGGGGYG------------GGGGGYGGGGAGGYGGG 185
           DR+RGF GGGGGYGGG YGGGGGGYGGGGYG            GGGGGY GGGAGGYGGG
Sbjct: 121 DRTRGF-GGGGGYGGGSYGGGGGGYGGGGYGGGGGDGYGGGGYGGGGGYSGGGAGGYGGG 180

Query: 186 GSGGGYGDGSG-----GYGSGGNYSSSFGGGSQGNYSNDFASANRGSV-AGGGGFGGNDA 245
           GSGGGYGDGSG     GY SGGNYS     GS GNYSND AS N GSV  GGGGFGGNDA
Sbjct: 181 GSGGGYGDGSGGYSGTGYSSGGNYSR----GSGGNYSNDNASDNLGSVGTGGGGFGGNDA 240

Query: 246 GGYDAASNFATGNTYDSGTNAGFGNVSGGGGDYFANSGSDASSGFGGYTGGEQFGSNETN 305
            GY+AASNFA+GNT+DSGTNAGFGNVSGGG DYFANSG DASSG GGYTGGEQFGS ETN
Sbjct: 241 -GYNAASNFASGNTHDSGTNAGFGNVSGGGSDYFANSGFDASSGVGGYTGGEQFGS-ETN 300

Query: 306 TMDASGDQGQEEPLEGNDRDEDDADDFAKRA 319
           TMDASGDQG  E LEGNDRDEDD DDFAKRA
Sbjct: 301 TMDASGDQGLGEQLEGNDRDEDDTDDFAKRA 324

BLAST of Cla97C06G125160 vs. NCBI nr
Match: KAG6589603.1 (Glycine-rich RNA-binding protein 3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 364.4 bits (934), Expect = 1.0e-96
Identity = 261/330 (79.09%), Postives = 278/330 (84.24%), Query Frame = 0

Query: 2   GCFKMAFLSKVGNILRQGANKRIGLDLQPSGLSICQAVRWMSSMQSSKLFIGGISYSTDD 61
           GCFKMAFLSKVGNILRQGANKR GL+LQ   LSI QAVRWMSSMQSSK+FIGGISYSTDD
Sbjct: 11  GCFKMAFLSKVGNILRQGANKRTGLNLQAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDD 70

Query: 62  QSLREAFSKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRQVRV 121
           QSLREAF+KYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGR+VRV
Sbjct: 71  QSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRV 130

Query: 122 NYANDRSR-----GFGGGGGGYGGGGYGGGGGGYGGGGYGGGGGGYGGGGAGGYGGGGSG 181
           NYANDRSR     G+GGGGGGYGGGGYGGGGGGYGGGGY GGGGGYGGGG+ G GGG  G
Sbjct: 131 NYANDRSRGMGGGGYGGGGGGYGGGGYGGGGGGYGGGGY-GGGGGYGGGGSYGGGGGSYG 190

Query: 182 GG-YG---DGSGGYG--SGGNYSSSFGGGSQGNYSNDFASANRGSVAGGGGFGGNDAGGY 241
           GG YG    G GGYG  SGG + S F  G   NYS+ F S ++GS  G  G GGNDAG  
Sbjct: 191 GGAYGGGVSGGGGYGGESGGGFGSGFSAGD--NYSSSFGSGSQGS-GGNYGTGGNDAGS- 250

Query: 242 DAASNFATGNTYDSGTNAGFG-NVSGGGGDYFANSGSDASSGFGGYTGGEQFGSNETNTM 301
           +AASNFA+GNT+ SGT+A F  NVS GGGDYFANSGSDASSGFGGYTGG+Q GSNE NT+
Sbjct: 251 NAASNFASGNTFGSGTSADFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQLGSNEANTL 310

Query: 302 DASGDQGQEEPLEGNDRDEDD-ADDFAKRA 319
           +ASGDQG  E LEGNDRDEDD ADDFAKRA
Sbjct: 311 NASGDQGLGEQLEGNDRDEDDNADDFAKRA 335

BLAST of Cla97C06G125160 vs. NCBI nr
Match: XP_022971767.1 (glycine-rich RNA-binding protein 3, mitochondrial-like isoform X1 [Cucurbita maxima] >XP_022971776.1 glycine-rich RNA-binding protein 3, mitochondrial-like isoform X1 [Cucurbita maxima] >XP_022971783.1 glycine-rich RNA-binding protein 3, mitochondrial-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 359.0 bits (920), Expect = 4.2e-95
Identity = 254/326 (77.91%), Postives = 277/326 (84.97%), Query Frame = 0

Query: 6   MAFLSKVGNILRQGANKRIGLDLQPSGLSICQAVRWMSSMQSSKLFIGGISYSTDDQSLR 65
           MAFLSKVGNILRQGANK+IG DLQ S LSICQAVRWMSSMQSSKLF+GGIS+STDDQSLR
Sbjct: 1   MAFLSKVGNILRQGANKKIGSDLQASSLSICQAVRWMSSMQSSKLFVGGISFSTDDQSLR 60

Query: 66  EAFSKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRQVRVNYAN 125
           EAF+KYGEV+EAR+IVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGR+VRVNYAN
Sbjct: 61  EAFTKYGEVVEARIIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 126 DRSRGFG----GGGGGYGGGGYGGGGGGYGGGGYGGGGGGYGGGGAGGYGGGGSGGGYGD 185
           DRSRG G    GGGGGYGGGG  GGGGGYGGGGY  GGGGYGGGG GGYGGGGS GGYGD
Sbjct: 121 DRSRGVGGGGYGGGGGYGGGGGYGGGGGYGGGGY--GGGGYGGGGPGGYGGGGS-GGYGD 180

Query: 186 GSG-----GYGSGGNYSSSFGGGSQ---GNYSNDFASANRGSVAGGGGFGGNDAGGYDAA 245
           GSG     GY SGGNY+++FGGGSQ   GNY N+FAS +RGSV+ GGGFGGNDA GY+ A
Sbjct: 181 GSGGFSTTGYSSGGNYTNNFGGGSQGTGGNYGNEFASDSRGSVSTGGGFGGNDA-GYN-A 240

Query: 246 SNFATGNTYDSGTNAGFGNVSGGGGDYFANSGSDASSGFGGYTGGEQFGSNETNTMDASG 305
           SNF       SG ++G  NVSGGGGDYF+N GS+ SSGFGGYTGG+QF S ET++M+A G
Sbjct: 241 SNF-------SGGDSGNYNVSGGGGDYFSNRGSEESSGFGGYTGGDQFSSKETDSMNAPG 300

Query: 306 DQGQEEPLEGNDRDE-DDADDFAKRA 319
             G  E LEGNDRDE DDA+DFAKRA
Sbjct: 301 -SGLGEQLEGNDRDEDDDANDFAKRA 313

BLAST of Cla97C06G125160 vs. NCBI nr
Match: XP_023516049.1 (glycine-rich RNA-binding protein 3, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357.8 bits (917), Expect = 9.4e-95
Identity = 253/321 (78.82%), Postives = 272/321 (84.74%), Query Frame = 0

Query: 6   MAFLSKVGNILRQGANKRIGLDLQPSGLSICQAVRWMSSMQSSKLFIGGISYSTDDQSLR 65
           MAFLSKVGNILRQGANKR GL+LQ   LSI QAVRWMSSMQSSK+F+GGISY+TDDQSLR
Sbjct: 1   MAFLSKVGNILRQGANKRTGLNLQAPSLSIFQAVRWMSSMQSSKVFVGGISYNTDDQSLR 60

Query: 66  EAFSKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRQVRVNYAN 125
           EAF+KYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGR+VRVNYAN
Sbjct: 61  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 126 DRSRGFGGGGGGYGGGGYGGGGGGYGGGGYGGGGGGYGGG----GAGGYGGGGSGGGYGD 185
           DRSRG GGGG G GGGGYGGGGGGYGGG YGGGGG YGGG    G G YGGGG+ GG G 
Sbjct: 121 DRSRGMGGGGYGGGGGGYGGGGGGYGGGSYGGGGGSYGGGGGSYGGGAYGGGGAYGGGGS 180

Query: 186 GSGGYG--SGGNYSSSFGGGSQGNYSNDFASANRGSVAGGGGFGGNDAGGYDAASNFATG 245
           G GGYG  SGG + S F  G   NYS+ F S ++GS  G  G GGNDAG  +AASNFA+G
Sbjct: 181 GGGGYGGESGGGFGSVFSAGD--NYSSSFGSGSQGS-GGNYGTGGNDAGS-NAASNFASG 240

Query: 246 NTYDSGTNAGFG-NVSGGGGDYFANSGSDASSGFGGYTGGEQFGSNETNTMDASGDQGQE 305
           NT+ SGT+AGF  NVS GGGDYFANSGSDASSGFGGYTGG+QFGSNE +T++ASGDQG  
Sbjct: 241 NTFGSGTSAGFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQFGSNEADTLNASGDQGLG 300

Query: 306 EPLEGNDRDEDD-ADDFAKRA 319
           E LEGNDRDEDD ADDFAKRA
Sbjct: 301 EQLEGNDRDEDDNADDFAKRA 317

BLAST of Cla97C06G125160 vs. NCBI nr
Match: XP_022921902.1 (glycine-rich RNA-binding protein 3, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 355.5 bits (911), Expect = 4.7e-94
Identity = 256/322 (79.50%), Postives = 272/322 (84.47%), Query Frame = 0

Query: 6   MAFLSKVGNILRQGANKRIGLDLQPSGLSICQAVRWMSSMQSSKLFIGGISYSTDDQSLR 65
           MAFLSKVGNILRQGANKR GL+ Q   LSI QAVRWMSSMQSSK+FIGGISYSTDDQSLR
Sbjct: 1   MAFLSKVGNILRQGANKRTGLNFQAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQSLR 60

Query: 66  EAFSKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRQVRVNYAN 125
           EAF+KYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGR+VRVNYAN
Sbjct: 61  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 126 DRSR-----GFGGGGGGYGGGGYGGGGGGYGGGGYGGGGGGYGGGGAGGYGGGGSGGGYG 185
           DRSR     G+GGGGGGYGGGGYGGGGGGYGGGG G GGG YGGGG G YGGG  GGG G
Sbjct: 121 DRSRGMGGGGYGGGGGGYGGGGYGGGGGGYGGGGGGYGGGSYGGGG-GSYGGGSYGGG-G 180

Query: 186 DGSGGYG--SGGNYSSSFGGGSQGNYSNDFASANRGSVAGGGGFGGNDAGGYDAASNFAT 245
            G GGYG  SGG + S F  G   NYS+ F S ++GS  G  G GGNDAG  +AASNFA+
Sbjct: 181 SGGGGYGGESGGGFGSGFSAGD--NYSSSFGSGSQGS-GGNYGTGGNDAGS-NAASNFAS 240

Query: 246 GNTYDSGTNAGFG-NVSGGGGDYFANSGSDASSGFGGYTGGEQFGSNETNTMDASGDQGQ 305
           GNT+ SGT+AGF  NVS GGGDYFANSGSDASSGFGGYTGG+QFGSNE NT++ASGDQG 
Sbjct: 241 GNTFGSGTSAGFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQFGSNEANTLNASGDQGL 300

Query: 306 EEPLEGNDRDEDD-ADDFAKRA 319
            E LEGNDRDEDD ADDFAKRA
Sbjct: 301 GEQLEGNDRDEDDNADDFAKRA 316

BLAST of Cla97C06G125160 vs. ExPASy Swiss-Prot
Match: Q9FNR1 (Glycine-rich RNA-binding protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBG3 PE=1 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.7e-46
Identity = 178/335 (53.13%), Postives = 219/335 (65.37%), Query Frame = 0

Query: 6   MAFLSKVGNILRQGANKRIGLDLQPSGLSICQAVRWMSSMQSSKLFIGGISYSTDDQSLR 65
           MAFLSK GNIL+Q  NK++   +  S  S+ QA+R MS   SSKLFIGG++YS D+ SLR
Sbjct: 1   MAFLSKFGNILKQTTNKQLNAQVSLSSPSLFQAIRCMS---SSKLFIGGMAYSMDEDSLR 60

Query: 66  EAFSKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRQVRVNYAN 125
           EAF+KYGEV++ RVI+DRETGRSRGFGFVT+TSSE ASSAIQALDG+DLHGR V+VNYAN
Sbjct: 61  EAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYAN 120

Query: 126 DRSR-------GFGGGGGGYGG-GGYGGGGGGYGG-GGYGGGGGGYGGGGAGGYGGGGSG 185
           DR+        G+GGGGGGYGG GGYGGG GGYGG GGYGGG GGYGG   GGYGG  +G
Sbjct: 121 DRTSGGGFGGGGYGGGGGGYGGSGGYGGGAGGYGGSGGYGGGAGGYGGNSGGGYGGNAAG 180

Query: 186 GGYGDGSGGY--------GSGGNYSSSFGGGSQGNYSNDFASANRGSVAGGGGFGGNDAG 245
           G  G G+GGY        G+GG Y SS G GS GN   + +SA+ G+V           G
Sbjct: 181 GYGGSGAGGYGGDATGHGGAGGGYGSSGGFGSSGNTYGEGSSASAGAV-----------G 240

Query: 246 GYDAASNFATGNTYDSGTNAGFGNVSGGGGDYFANSGSDASSGFGG----YTGGEQF-GS 305
            Y+ +S + + NTY S +N GF   S  GG    N     SS FGG    +T G QF G 
Sbjct: 241 DYNGSSGYGSANTYGS-SNGGFAGDSQFGGSPVGN-----SSQFGGDNTQFTAGGQFGGE 300

Query: 306 NETNTMDASGDQGQEEPLEGNDRDEDDADDFAKRA 319
           ++  +M+ S  + ++ P+ G      + +D AKRA
Sbjct: 301 DQFGSMEKSETKMEDGPIGG------EFEDVAKRA 309

BLAST of Cla97C06G125160 vs. ExPASy Swiss-Prot
Match: Q9C909 (Glycine-rich RNA-binding protein 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBG5 PE=1 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.5e-31
Identity = 158/320 (49.38%), Postives = 193/320 (60.31%), Query Frame = 0

Query: 6   MAFLSKVGNILRQGANKRIGLDLQPSGLSICQAVRWMSSMQSSKLFIGGISYSTDDQSLR 65
           MAFLSKVG +  Q ++         +  S+ Q++R MS   SSK+F+GGISYSTD+  LR
Sbjct: 1   MAFLSKVGRLFSQTSSH------VTASSSMLQSIRCMS---SSKIFVGGISYSTDEFGLR 60

Query: 66  EAFSKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRQVRVNYAN 125
           EAFSKYGEV++A++IVDRETGRSRGF FVT+TS+EEAS+A+Q LDGQDLHGR++RVNYA 
Sbjct: 61  EAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYAT 120

Query: 126 DRSRGFGGGGGGYGGGGYGGGGGGYG--GGGYGGGGGGYGG-----GGAGGYGGGGSGGG 185
           +R  GFGG G G  GGGYG   GGYG   GGYGGG GGYGG     G AGG GG G    
Sbjct: 121 ERGSGFGGRGFGGPGGGYGASDGGYGAPAGGYGGGAGGYGGNSSYSGNAGGGGGYGGNSS 180

Query: 186 YGDGSGGYGSGGNYSSSFGGGSQGNYSNDFASANRGSVAGGGGFGGNDAGGYDAASNFAT 245
           YG  +GGYG    YS +  GG  G Y ++F         GGGG+G   AGG   + NFA 
Sbjct: 181 YGGNAGGYGGNPPYSGNAVGGG-GGYGSNF--------GGGGGYG--VAGGVGGSENFAQ 240

Query: 246 GNTYDSGTNAGFGNVSGGGGDYFANSGSDASSGFGGYTGGEQFGSNETNTMDASGDQGQE 305
           G    S TNAGF +          ++     SG G   G EQFG ++    DA     + 
Sbjct: 241 G----SSTNAGFDDKFESNQPLGNDTDHQTESGLG---GDEQFGGSDNQFGDAENGNTEN 289

Query: 306 EPLEGNDRDEDDADDFAKRA 319
            P+     D+ D  D AKRA
Sbjct: 301 GPV---GFDQTDDGDVAKRA 289

BLAST of Cla97C06G125160 vs. ExPASy Swiss-Prot
Match: Q9SVM8 (Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBG2 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.8e-25
Identity = 92/165 (55.76%), Postives = 120/165 (72.73%), Query Frame = 0

Query: 6   MAFLSKVGNILRQGANKRIGLDLQPSGLSICQAVRWMSSMQSSKLFIGGISYSTDDQSLR 65
           MAF +K+G +LRQ  +    + +     S+  ++R M    S+KLFIGG+S+ TDD SLR
Sbjct: 1   MAFCNKLGGLLRQNISSNGNVPV----TSMLGSLRLM----STKLFIGGLSWGTDDASLR 60

Query: 66  EAFSKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRQVRVNYAN 125
           +AF+ +G+V++A+VIVDRETGRSRGFGFV +     A++AI  +DG++L+GR +RVN AN
Sbjct: 61  DAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPAN 120

Query: 126 DR---SRGFGGGGG-GYGGGGYGGGGGGYGGGGYGGGGGGYGGGG 167
           DR    R +GGGGG   GGGGYGGGGGGYGGGG G GGGG GGGG
Sbjct: 121 DRPSAPRAYGGGGGYSGGGGGYGGGGGGYGGGGGGYGGGGDGGGG 157

BLAST of Cla97C06G125160 vs. ExPASy Swiss-Prot
Match: Q43472 (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare OX=4513 GN=blt801 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.0e-19
Identity = 96/160 (60.00%), Postives = 114/160 (71.25%), Query Frame = 0

Query: 49  KLFIGGISYSTDDQSLREAFSKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQA 108
           + F+GG+ ++TDDQSL+ AFSKYG+VI++++I DRETGRSRGFGFVT+ S E    AI+A
Sbjct: 7   RCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66

Query: 109 LDGQDLHGRQVRVNYANDRSRGFGGGGGGYGGGGYGGGGGGYGGGGYGGGGGGYGGGGAG 168
           ++GQDL GR + VN A  R R  GGGG G GGGGYGG     GGGGYGGGGGGYGGG +G
Sbjct: 67  MNGQDLDGRNITVNEAQSR-RSDGGGGFGGGGGGYGGQRREGGGGGYGGGGGGYGGGRSG 126

Query: 169 GYGGGGS----GGGYGDGSGGYGSGGNYSSSFGGGSQGNY 205
           G GG GS    GGGYG G GGYG       S GG   GN+
Sbjct: 127 GGGGYGSRDGGGGGYGGGGGGYG------GSRGGSGGGNW 159

BLAST of Cla97C06G125160 vs. ExPASy Swiss-Prot
Match: P49311 (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba OX=3728 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.5e-18
Identity = 95/166 (57.23%), Postives = 117/166 (70.48%), Query Frame = 0

Query: 49  KLFIGGISYSTDDQSLREAFSKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQA 108
           + F+GG++++TD++SL  AFS++GE++++++I DRETGRSRGFGFVT+   +    AI+ 
Sbjct: 9   RCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68

Query: 109 LDGQDLHGRQVRVNYANDRSRGFG----GGGGGY-GGGGYGGGGGGYG-----GGGYGGG 168
           ++GQDL GR + VN A  R  G G    GGGGGY GGGGYGGGGGGYG     GGGY GG
Sbjct: 69  MNGQDLDGRSITVNEAQSRGSGAGGGGRGGGGGYRGGGGYGGGGGGYGGGRREGGGYSGG 128

Query: 169 GGGYG--GGGAGGYGGGG--SGGGYGDG-SGGYGSGGNYSSSFGGG 200
           GGGY   GGG GGYGGGG   GGGYG G  GGYG GG      GGG
Sbjct: 129 GGGYSSRGGGGGGYGGGGRRDGGGYGGGEGGGYGGGG------GGG 168

BLAST of Cla97C06G125160 vs. ExPASy TrEMBL
Match: A0A6J1I7Z2 (glycine-rich RNA-binding protein 3, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470449 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 2.0e-95
Identity = 254/326 (77.91%), Postives = 277/326 (84.97%), Query Frame = 0

Query: 6   MAFLSKVGNILRQGANKRIGLDLQPSGLSICQAVRWMSSMQSSKLFIGGISYSTDDQSLR 65
           MAFLSKVGNILRQGANK+IG DLQ S LSICQAVRWMSSMQSSKLF+GGIS+STDDQSLR
Sbjct: 1   MAFLSKVGNILRQGANKKIGSDLQASSLSICQAVRWMSSMQSSKLFVGGISFSTDDQSLR 60

Query: 66  EAFSKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRQVRVNYAN 125
           EAF+KYGEV+EAR+IVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGR+VRVNYAN
Sbjct: 61  EAFTKYGEVVEARIIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 126 DRSRGFG----GGGGGYGGGGYGGGGGGYGGGGYGGGGGGYGGGGAGGYGGGGSGGGYGD 185
           DRSRG G    GGGGGYGGGG  GGGGGYGGGGY  GGGGYGGGG GGYGGGGS GGYGD
Sbjct: 121 DRSRGVGGGGYGGGGGYGGGGGYGGGGGYGGGGY--GGGGYGGGGPGGYGGGGS-GGYGD 180

Query: 186 GSG-----GYGSGGNYSSSFGGGSQ---GNYSNDFASANRGSVAGGGGFGGNDAGGYDAA 245
           GSG     GY SGGNY+++FGGGSQ   GNY N+FAS +RGSV+ GGGFGGNDA GY+ A
Sbjct: 181 GSGGFSTTGYSSGGNYTNNFGGGSQGTGGNYGNEFASDSRGSVSTGGGFGGNDA-GYN-A 240

Query: 246 SNFATGNTYDSGTNAGFGNVSGGGGDYFANSGSDASSGFGGYTGGEQFGSNETNTMDASG 305
           SNF       SG ++G  NVSGGGGDYF+N GS+ SSGFGGYTGG+QF S ET++M+A G
Sbjct: 241 SNF-------SGGDSGNYNVSGGGGDYFSNRGSEESSGFGGYTGGDQFSSKETDSMNAPG 300

Query: 306 DQGQEEPLEGNDRDE-DDADDFAKRA 319
             G  E LEGNDRDE DDA+DFAKRA
Sbjct: 301 -SGLGEQLEGNDRDEDDDANDFAKRA 313

BLAST of Cla97C06G125160 vs. ExPASy TrEMBL
Match: A0A6J1E1P2 (glycine-rich RNA-binding protein 3, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111430026 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 2.3e-94
Identity = 256/322 (79.50%), Postives = 272/322 (84.47%), Query Frame = 0

Query: 6   MAFLSKVGNILRQGANKRIGLDLQPSGLSICQAVRWMSSMQSSKLFIGGISYSTDDQSLR 65
           MAFLSKVGNILRQGANKR GL+ Q   LSI QAVRWMSSMQSSK+FIGGISYSTDDQSLR
Sbjct: 1   MAFLSKVGNILRQGANKRTGLNFQAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQSLR 60

Query: 66  EAFSKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRQVRVNYAN 125
           EAF+KYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGR+VRVNYAN
Sbjct: 61  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 126 DRSR-----GFGGGGGGYGGGGYGGGGGGYGGGGYGGGGGGYGGGGAGGYGGGGSGGGYG 185
           DRSR     G+GGGGGGYGGGGYGGGGGGYGGGG G GGG YGGGG G YGGG  GGG G
Sbjct: 121 DRSRGMGGGGYGGGGGGYGGGGYGGGGGGYGGGGGGYGGGSYGGGG-GSYGGGSYGGG-G 180

Query: 186 DGSGGYG--SGGNYSSSFGGGSQGNYSNDFASANRGSVAGGGGFGGNDAGGYDAASNFAT 245
            G GGYG  SGG + S F  G   NYS+ F S ++GS  G  G GGNDAG  +AASNFA+
Sbjct: 181 SGGGGYGGESGGGFGSGFSAGD--NYSSSFGSGSQGS-GGNYGTGGNDAGS-NAASNFAS 240

Query: 246 GNTYDSGTNAGFG-NVSGGGGDYFANSGSDASSGFGGYTGGEQFGSNETNTMDASGDQGQ 305
           GNT+ SGT+AGF  NVS GGGDYFANSGSDASSGFGGYTGG+QFGSNE NT++ASGDQG 
Sbjct: 241 GNTFGSGTSAGFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQFGSNEANTLNASGDQGL 300

Query: 306 EEPLEGNDRDEDD-ADDFAKRA 319
            E LEGNDRDEDD ADDFAKRA
Sbjct: 301 GEQLEGNDRDEDDNADDFAKRA 316

BLAST of Cla97C06G125160 vs. ExPASy TrEMBL
Match: A0A6J1EZK6 (glycine-rich RNA-binding protein 2, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111440991 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 3.0e-94
Identity = 255/322 (79.19%), Postives = 274/322 (85.09%), Query Frame = 0

Query: 6   MAFLSKVGNILRQGANKRIGLDLQPSGLSICQAVRWMSSMQSSKLFIGGISYSTDDQSLR 65
           MAFLSKVGNILRQGANKRIG DLQ   LSICQAVRWMSSMQSSKLF+GGIS+STDDQSLR
Sbjct: 1   MAFLSKVGNILRQGANKRIGSDLQAPSLSICQAVRWMSSMQSSKLFVGGISFSTDDQSLR 60

Query: 66  EAFSKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRQVRVNYAN 125
           EAF+KYGEV+EAR+IVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGR+VRVNYAN
Sbjct: 61  EAFTKYGEVVEARIIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 126 DRSRGFGGGGGGYGGGGYGGGGGGYGGGGYGGGGGGYGGGGAGGYGGGGSGGGYGDGSG- 185
           DRSRG   GGGGYGGGG G GGGGYGGGG  GGGGGYG GGAGGYGGGGS GGYGDGSG 
Sbjct: 121 DRSRGV--GGGGYGGGG-GYGGGGYGGGGGYGGGGGYGDGGAGGYGGGGS-GGYGDGSGG 180

Query: 186 ----GYGSGGNYSSSFGGGSQ---GNYSNDFASANRGSVAGGGGFGGNDAGGYDAASNFA 245
               GY SGGNYS++FGGGSQ   GNY N+FAS +RGSV+ GGGFGGNDA GY+ ASNF 
Sbjct: 181 FSTTGYSSGGNYSNNFGGGSQGSGGNYGNEFASDSRGSVSTGGGFGGNDA-GYN-ASNF- 240

Query: 246 TGNTYDSGTNAGFGNVSGGGGDYFANSGSDASSGFGGYTGGEQFGSNETNTMDASGDQGQ 305
                 SG ++G  NVSGGGGDYF+N GS+ SSGFGGYTGG+QF S ET+TM+A G  G 
Sbjct: 241 ------SGGDSGNYNVSGGGGDYFSNRGSEESSGFGGYTGGDQFSSKETDTMNAPG-SGL 300

Query: 306 EEPLEGNDRDE-DDADDFAKRA 319
            E LEGNDRDE DDADDFAKRA
Sbjct: 301 GEQLEGNDRDEDDDADDFAKRA 308

BLAST of Cla97C06G125160 vs. ExPASy TrEMBL
Match: A0A6J1JKW7 (glycine-rich RNA-binding protein 3, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485357 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 3.4e-90
Identity = 257/332 (77.41%), Postives = 272/332 (81.93%), Query Frame = 0

Query: 6   MAFLSKVGNILRQGANKRIGLDLQPSGLSICQAVRWMSSMQSSKLFIGGISYSTDDQSLR 65
           MAFLSKVGNILRQ ANKR GL+LQ   LSICQAVRWMSSMQSSK+F+GGISYSTDDQSLR
Sbjct: 1   MAFLSKVGNILRQSANKRTGLNLQAPSLSICQAVRWMSSMQSSKVFVGGISYSTDDQSLR 60

Query: 66  EAFSKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRQVRVNYAN 125
           EAF+KYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGR+VRVNYAN
Sbjct: 61  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 126 DRSRGFGGG-GGGY--GGGGYGG---GGGGYGGGGYGGGGGGYGGGG----AGGYGGGGS 185
           DRSRG GGG GGGY  GGGGYGG   GGGGYGGGGYGGG GGYGGGG     G YGGGGS
Sbjct: 121 DRSRGMGGGYGGGYGGGGGGYGGGGYGGGGYGGGGYGGGSGGYGGGGGSYSGGAYGGGGS 180

Query: 186 -GGGYGDGSG-----GYGSGGNYSSSFGGGSQGNYSNDFASANRGSVAGGGGFGGNDAGG 245
            GGGYG  SG     G+ +G NYSSSFGGGSQG+              G  G GGNDAG 
Sbjct: 181 GGGGYGGESGGGFGSGFSTGDNYSSSFGGGSQGS-------------GGNYGTGGNDAGS 240

Query: 246 YDAASNFATGNTYDSGTNAGFG-NVSGGGGDYFANSGSDASSGFGGYTGGEQFGSN-ETN 305
            ++ASNFA+GN   SGT+AGF  NVS GGGDYFANSGSDASSGFGGYTGG+QFGSN E N
Sbjct: 241 -NSASNFASGN---SGTSAGFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQFGSNDEAN 300

Query: 306 TMDASGDQGQEEPLEGNDRDEDD-ADDFAKRA 319
           T++ASGDQG  E LEGNDRDEDD ADDFAKRA
Sbjct: 301 TLNASGDQGLGEQLEGNDRDEDDNADDFAKRA 315

BLAST of Cla97C06G125160 vs. ExPASy TrEMBL
Match: A0A6J1I6P9 (glycine-rich RNA-binding protein 2, mitochondrial-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470449 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 1.1e-88
Identity = 240/318 (75.47%), Postives = 266/318 (83.65%), Query Frame = 0

Query: 6   MAFLSKVGNILRQGANKRIGLDLQPSGLSICQAVRWMSSMQSSKLFIGGISYSTDDQSLR 65
           MAFLSKVGNILRQGANK+IG DLQ S LSICQAVRWMSSMQSSKLF+GGIS+STDDQSLR
Sbjct: 1   MAFLSKVGNILRQGANKKIGSDLQASSLSICQAVRWMSSMQSSKLFVGGISFSTDDQSLR 60

Query: 66  EAFSKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRQVRVNYAN 125
           EAF+KYGEV+EAR+IVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGR+VRVNYAN
Sbjct: 61  EAFTKYGEVVEARIIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 126 DRSRGFGGGGGGYGGGGYGGGGGGYGGGGYGGGG-GGYGGGGAGGYGGGGSGGGYGDGSG 185
           DRSRG GGGG         GGGGGYGGGGYGGGG GGYGGGG+GGYG G   GG+   + 
Sbjct: 121 DRSRGVGGGG--------YGGGGGYGGGGYGGGGPGGYGGGGSGGYGDG--SGGF--STT 180

Query: 186 GYGSGGNYSSSFGGGSQ---GNYSNDFASANRGSVAGGGGFGGNDAGGYDAASNFATGNT 245
           GY SGGNY+++FGGGSQ   GNY N+FAS +RGSV+ GGGFGGNDA GY+ ASNF     
Sbjct: 181 GYSSGGNYTNNFGGGSQGTGGNYGNEFASDSRGSVSTGGGFGGNDA-GYN-ASNF----- 240

Query: 246 YDSGTNAGFGNVSGGGGDYFANSGSDASSGFGGYTGGEQFGSNETNTMDASGDQGQEEPL 305
             SG ++G  NVSGGGGDYF+N GS+ SSGFGGYTGG+QF S ET++M+A G  G  E L
Sbjct: 241 --SGGDSGNYNVSGGGGDYFSNRGSEESSGFGGYTGGDQFSSKETDSMNAPG-SGLGEQL 296

Query: 306 EGNDRDE-DDADDFAKRA 319
           EGNDRDE DDA+DFAKRA
Sbjct: 301 EGNDRDEDDDANDFAKRA 296

BLAST of Cla97C06G125160 vs. TAIR 10
Match: AT5G61030.1 (glycine-rich RNA-binding protein 3 )

HSP 1 Score: 188.0 bits (476), Expect = 1.2e-47
Identity = 178/335 (53.13%), Postives = 219/335 (65.37%), Query Frame = 0

Query: 6   MAFLSKVGNILRQGANKRIGLDLQPSGLSICQAVRWMSSMQSSKLFIGGISYSTDDQSLR 65
           MAFLSK GNIL+Q  NK++   +  S  S+ QA+R MS   SSKLFIGG++YS D+ SLR
Sbjct: 1   MAFLSKFGNILKQTTNKQLNAQVSLSSPSLFQAIRCMS---SSKLFIGGMAYSMDEDSLR 60

Query: 66  EAFSKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRQVRVNYAN 125
           EAF+KYGEV++ RVI+DRETGRSRGFGFVT+TSSE ASSAIQALDG+DLHGR V+VNYAN
Sbjct: 61  EAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYAN 120

Query: 126 DRSR-------GFGGGGGGYGG-GGYGGGGGGYGG-GGYGGGGGGYGGGGAGGYGGGGSG 185
           DR+        G+GGGGGGYGG GGYGGG GGYGG GGYGGG GGYGG   GGYGG  +G
Sbjct: 121 DRTSGGGFGGGGYGGGGGGYGGSGGYGGGAGGYGGSGGYGGGAGGYGGNSGGGYGGNAAG 180

Query: 186 GGYGDGSGGY--------GSGGNYSSSFGGGSQGNYSNDFASANRGSVAGGGGFGGNDAG 245
           G  G G+GGY        G+GG Y SS G GS GN   + +SA+ G+V           G
Sbjct: 181 GYGGSGAGGYGGDATGHGGAGGGYGSSGGFGSSGNTYGEGSSASAGAV-----------G 240

Query: 246 GYDAASNFATGNTYDSGTNAGFGNVSGGGGDYFANSGSDASSGFGG----YTGGEQF-GS 305
            Y+ +S + + NTY S +N GF   S  GG    N     SS FGG    +T G QF G 
Sbjct: 241 DYNGSSGYGSANTYGS-SNGGFAGDSQFGGSPVGN-----SSQFGGDNTQFTAGGQFGGE 300

Query: 306 NETNTMDASGDQGQEEPLEGNDRDEDDADDFAKRA 319
           ++  +M+ S  + ++ P+ G      + +D AKRA
Sbjct: 301 DQFGSMEKSETKMEDGPIGG------EFEDVAKRA 309

BLAST of Cla97C06G125160 vs. TAIR 10
Match: AT1G74230.1 (glycine-rich RNA-binding protein 5 )

HSP 1 Score: 136.7 bits (343), Expect = 3.2e-32
Identity = 158/320 (49.38%), Postives = 193/320 (60.31%), Query Frame = 0

Query: 6   MAFLSKVGNILRQGANKRIGLDLQPSGLSICQAVRWMSSMQSSKLFIGGISYSTDDQSLR 65
           MAFLSKVG +  Q ++         +  S+ Q++R MS   SSK+F+GGISYSTD+  LR
Sbjct: 1   MAFLSKVGRLFSQTSSH------VTASSSMLQSIRCMS---SSKIFVGGISYSTDEFGLR 60

Query: 66  EAFSKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRQVRVNYAN 125
           EAFSKYGEV++A++IVDRETGRSRGF FVT+TS+EEAS+A+Q LDGQDLHGR++RVNYA 
Sbjct: 61  EAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYAT 120

Query: 126 DRSRGFGGGGGGYGGGGYGGGGGGYG--GGGYGGGGGGYGG-----GGAGGYGGGGSGGG 185
           +R  GFGG G G  GGGYG   GGYG   GGYGGG GGYGG     G AGG GG G    
Sbjct: 121 ERGSGFGGRGFGGPGGGYGASDGGYGAPAGGYGGGAGGYGGNSSYSGNAGGGGGYGGNSS 180

Query: 186 YGDGSGGYGSGGNYSSSFGGGSQGNYSNDFASANRGSVAGGGGFGGNDAGGYDAASNFAT 245
           YG  +GGYG    YS +  GG  G Y ++F         GGGG+G   AGG   + NFA 
Sbjct: 181 YGGNAGGYGGNPPYSGNAVGGG-GGYGSNF--------GGGGGYG--VAGGVGGSENFAQ 240

Query: 246 GNTYDSGTNAGFGNVSGGGGDYFANSGSDASSGFGGYTGGEQFGSNETNTMDASGDQGQE 305
           G    S TNAGF +          ++     SG G   G EQFG ++    DA     + 
Sbjct: 241 G----SSTNAGFDDKFESNQPLGNDTDHQTESGLG---GDEQFGGSDNQFGDAENGNTEN 289

Query: 306 EPLEGNDRDEDDADDFAKRA 319
            P+     D+ D  D AKRA
Sbjct: 301 GPV---GFDQTDDGDVAKRA 289

BLAST of Cla97C06G125160 vs. TAIR 10
Match: AT4G13850.2 (glycine-rich RNA-binding protein 2 )

HSP 1 Score: 122.5 bits (306), Expect = 6.2e-28
Identity = 88/160 (55.00%), Postives = 116/160 (72.50%), Query Frame = 0

Query: 6   MAFLSKVGNILRQGANKRIGLDLQPSGLSICQAVRWMSSMQSSKLFIGGISYSTDDQSLR 65
           MAF +K+G +LRQ  +    + +     S+  ++R M    S+KLFIGG+S+ TDD SLR
Sbjct: 1   MAFCNKLGGLLRQNISSNGNVPV----TSMLGSLRLM----STKLFIGGLSWGTDDASLR 60

Query: 66  EAFSKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRQVRVNYAN 125
           +AF+ +G+V++A+VIVDRETGRSRGFGFV +     A++AI  +DG++L+GR +RVN AN
Sbjct: 61  DAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPAN 120

Query: 126 DR---SRGFGGGGG---GYGGGGYGGGGGGYGGGGYGGGG 160
           DR    R +GGGGG   G GGGGYGGGGGGYGGGG GGGG
Sbjct: 121 DRPSAPRAYGGGGGYSYGGGGGGYGGGGGGYGGGGDGGGG 152

BLAST of Cla97C06G125160 vs. TAIR 10
Match: AT4G13850.1 (glycine-rich RNA-binding protein 2 )

HSP 1 Score: 117.5 bits (293), Expect = 2.0e-26
Identity = 92/165 (55.76%), Postives = 120/165 (72.73%), Query Frame = 0

Query: 6   MAFLSKVGNILRQGANKRIGLDLQPSGLSICQAVRWMSSMQSSKLFIGGISYSTDDQSLR 65
           MAF +K+G +LRQ  +    + +     S+  ++R M    S+KLFIGG+S+ TDD SLR
Sbjct: 1   MAFCNKLGGLLRQNISSNGNVPV----TSMLGSLRLM----STKLFIGGLSWGTDDASLR 60

Query: 66  EAFSKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRQVRVNYAN 125
           +AF+ +G+V++A+VIVDRETGRSRGFGFV +     A++AI  +DG++L+GR +RVN AN
Sbjct: 61  DAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPAN 120

Query: 126 DR---SRGFGGGGG-GYGGGGYGGGGGGYGGGGYGGGGGGYGGGG 167
           DR    R +GGGGG   GGGGYGGGGGGYGGGG G GGGG GGGG
Sbjct: 121 DRPSAPRAYGGGGGYSGGGGGYGGGGGGYGGGGGGYGGGGDGGGG 157

BLAST of Cla97C06G125160 vs. TAIR 10
Match: AT2G21660.1 (cold, circadian rhythm, and rna binding 2 )

HSP 1 Score: 89.4 bits (220), Expect = 5.8e-18
Identity = 89/182 (48.90%), Postives = 114/182 (62.64%), Query Frame = 0

Query: 49  KLFIGGISYSTDDQSLREAFSKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQA 108
           + F+GG++++TDD++L  AF++YG+VI++++I DRETGRSRGFGFVT+   +    AI+ 
Sbjct: 9   RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68

Query: 109 LDGQDLHGRQVRVNYANDRSRGFGGGGGGYGGGGYGGGGGGYGGGGYGGGGGGYGGGGAG 168
           ++GQDL GR + VN A  R  G GGG  G GGGGY  G    GGGGY GGGG YGGGG  
Sbjct: 69  MNGQDLDGRSITVNEAQSRGSGGGGGHRGGGGGGYRSG----GGGGYSGGGGSYGGGG-- 128

Query: 169 GYGGGGSGGGYGDGSGGYGSGGNYSSSFGGGSQGNYSNDFASANRGSVAGGGGFGGNDAG 228
             G    GGGY  G GGY S G    S+GGG +                GGGG+GG + G
Sbjct: 129 --GRREGGGGYSGGGGGYSSRGGGGGSYGGGRR---------------EGGGGYGGGEGG 167

Query: 229 GY 231
           GY
Sbjct: 189 GY 167

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038878732.13.6e-11083.08glycine-rich RNA-binding protein 3, mitochondrial-like [Benincasa hispida][more]
KAG6589603.11.0e-9679.09Glycine-rich RNA-binding protein 3, mitochondrial, partial [Cucurbita argyrosper... [more]
XP_022971767.14.2e-9577.91glycine-rich RNA-binding protein 3, mitochondrial-like isoform X1 [Cucurbita max... [more]
XP_023516049.19.4e-9578.82glycine-rich RNA-binding protein 3, mitochondrial-like [Cucurbita pepo subsp. pe... [more]
XP_022921902.14.7e-9479.50glycine-rich RNA-binding protein 3, mitochondrial-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Q9FNR11.7e-4653.13Glycine-rich RNA-binding protein 3, mitochondrial OS=Arabidopsis thaliana OX=370... [more]
Q9C9094.5e-3149.38Glycine-rich RNA-binding protein 5, mitochondrial OS=Arabidopsis thaliana OX=370... [more]
Q9SVM82.8e-2555.76Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana OX=370... [more]
Q434721.0e-1960.00Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare OX=4513 GN=blt801 PE=... [more]
P493111.5e-1857.23Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba OX=3728 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1I7Z22.0e-9577.91glycine-rich RNA-binding protein 3, mitochondrial-like isoform X1 OS=Cucurbita m... [more]
A0A6J1E1P22.3e-9479.50glycine-rich RNA-binding protein 3, mitochondrial-like OS=Cucurbita moschata OX=... [more]
A0A6J1EZK63.0e-9479.19glycine-rich RNA-binding protein 2, mitochondrial-like OS=Cucurbita moschata OX=... [more]
A0A6J1JKW73.4e-9077.41glycine-rich RNA-binding protein 3, mitochondrial-like isoform X1 OS=Cucurbita m... [more]
A0A6J1I6P91.1e-8875.47glycine-rich RNA-binding protein 2, mitochondrial-like isoform X2 OS=Cucurbita m... [more]
Match NameE-valueIdentityDescription
AT5G61030.11.2e-4753.13glycine-rich RNA-binding protein 3 [more]
AT1G74230.13.2e-3249.38glycine-rich RNA-binding protein 5 [more]
AT4G13850.26.2e-2855.00glycine-rich RNA-binding protein 2 [more]
AT4G13850.12.0e-2655.76glycine-rich RNA-binding protein 2 [more]
AT2G21660.15.8e-1848.90cold, circadian rhythm, and rna binding 2 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01228EGGSHELLcoord: 145..160
score: 60.16
coord: 218..236
score: 36.18
coord: 170..180
score: 53.41
coord: 44..60
score: 23.53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 268..318
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 268..294
NoneNo IPR availablePANTHERPTHR48027HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATEDcoord: 6..317
NoneNo IPR availablePANTHERPTHR48027:SF9GLYCINE-RICH RNA-BINDING PROTEIN 3, MITOCHONDRIALcoord: 6..317
NoneNo IPR availableCDDcd12399RRM_HP0827_likecoord: 49..125
e-value: 7.01431E-30
score: 106.929
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 49..122
e-value: 1.7E-30
score: 117.3
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 50..120
e-value: 3.2E-23
score: 81.3
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 48..126
score: 22.435411
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 40..163
e-value: 1.6E-35
score: 124.2
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 45..158

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C06G125160.2Cla97C06G125160.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding