Cla97C05G087750 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C05G087750
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Dynein light chain
Location	Cla97Chr05: 5884834 .. 5888898 (+)
RNA-Seq Expression	Cla97C05G087750
Synteny	Cla97C05G087750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAGAACGAGCGAGTAGAGAGGAGTGGGCGTCGAGAATCTTAGAGAAGAGACGCAGAGTGATAGTGGATGAGAGCGAGTGCCTTTCTTCTCTCACTCGCTCTTCTTCATCTCTTACCACCAGAACAATATTCTCTGAAAGCTCCACCAAGTCATGAACCAAGAATCTCATCGCACCAGTCCTTCACCTCTAATGGTGAAGCCTGAATCTCAGGATCGCAAACCCTCATCTGCCGCTGCCGTCTCCAAGAAAATCGTCATCAAGAGCGCCGATATGTTCGGCGACATGCAGAAGGAAGCTATTGACATTGCCATAGCTGTTTGTGCTTCTTTCTCTCTAGATAACTACTCTTAATCTCATTATTCTAACCATTCCTTACCTAATTACTTCACAATCTGTTTCGTTTAGGCATTTGAGAAGCATTCCGTTGAGAAGGATGTCGCCGAACACATAAAGAAGGAGTTCGATAAGAATCATGGACCCACCTGGCATTGCATCGTCGGTCGTAATTTTGGTACCTTTTTTCATTCTCTCTTTCGGAATCTCTACCTTCCTGCTTGATTTTTGCTTTCTTTCACTCTGATGGCTGAATCTCTATTGATTTCTGTTGCTTTACTCTCTTGGAAATGCTTCTCTTACTTCAACTTCAATCTGTAGGTTTCTTTTCCCTCCACTGAAATGAAGATCTAGTTTTTGATTTGTTTAATTTTTTTTTCCGGCGAATAATTAGATGGAGACTGGAGAGGGATGTTTTCTCGGGATTCTGATATCATTAGCTTGGCTCTTCTTTCAGGCTCCACCATTTAGCAGAAGCAAGATTTGTCTGCATAGGCAGTTTTAGCCCGTTAGTGTGTTAATACATTGAAATCACATATATTCTTGCATCAATCGGTAAGTGAACTCTATTGGAGAATTTTGACTCCATTTGGTCCATCGCCTACCTCTATATTAATTTGCTAGCTAATTCTCAGCTTCAGCAATCGTGTCAGCCTACATGAATTGAATGAATATCAGTGGATGGTCTTGCTATGGTTGGTGGCAACTTGGGGTTGGGGCTCCCCATTTAATTTCGATGACGAGGCCAACAATCAAAGTGAAATAGGATTGTTTGGAACTATGCAAGTTGAATATTAGGCTCAAGTATTTCATAAGGACAAAGACCAATATATGAATAGTTATCTTGGGTCCAAATCTTCCCATTTTCAGTTGCCTCTTTTTTATTAAAGAAGAATGTTAGGCAGTAGCACGTAAGCAGAATGACTTAGTTTTGCTAGTCATAATTCAACCGAATCATTTGTGATTTAGTTTAATATTGCAATGTGATCAGGCAGTTTTAAACTAAAGCAGACTTCACTGTAATATTGTCTCTTTAGCAATTTTTGTTCAACATGACTCACTCTGATATTGGTATGGTTCTCTTTGCATGGTGAAAGGTAGGAATCAAAATATACTGCTTCATGTTTAATTCAAGTATCAAATGTTCAGTTCTTGTTTTTTATGGGATGTAAAAGATTGCTTGACGAGATACAGGGAGGTGATCTACAACTTTCTCATTTTCTTTGTGCTGTTAGGGAAACAAACAATTCTTGTAGGCGAAGAATACGAGGGTGTGATCAGTGATCACACCTCATTGACAGAGAGCCTTGCTAATATAAACTTTTAATAGTAAACTCTTGTTTTACCATGCCATTCTAAGATCTAGAGCTGAATGCTAAATGCTTTGACCTAAAGTTGATATGTCACTTGTAAGTGGGTAGTGTTGTTGCTCGTGGTTTCCATTACTCCGTAGAGCCAAAAAATTTCCTTTATGTGGCCAATCCAATCATCCCAATCCTTGGAAGAACCTCGTGGTATTAGTGATCCATTTAGTGTTTTCATTTTGGACCGAAATTTCTTCCTAACAATGCATTCCTAGCCGTAAAAAATTGCAAGCTCTCGTAGTTATTATGTTAGCAGATGAAAAGAACCCACCTGTTCTAGTTGCTGGCTTTAGACTGAAAATTTTGGACAATTCTGAAAATATGCTCCCTTATCTCCCTGAATGTTGCAGTGCATCGTCCTGTTCTTGATTATTGAGCTTTATTCAGGGTCCTATCTGTCGTTCATTCTCGTGCATTAAATTAATGTCGAGGGGATTCTGTTCTCTGGGGGTTCTGTTTCAGGTTCATATGTGACACACGAGACGAACCATTTTGTTTACTTCTACCTGGATCAGAAAGCAGTTTTACTTTTCAAATCTGGTTGATGATCGTTCTCCCCTTGAAAAGGATGCCACCAATTTGGCGAGCTTGCGTCAATGATGCTACAACTATTTCTTGTATGTATAATCTAGTCTGCCAGTATGTAAATCACCTGGTGTTGCATTTTCTATATTGTAACTAATTTATCACTGGGGAGTAGATTAAATGGTGAAACAAGAATTCCATTTACATAATGTATCAAAAGGTCTCTTTGTCAATATCACTAAAACAGAAGGCTGCAGTACAAGCTTGAAAATGAAAAAGAAAATGCTCTGTCATTGCCAAATGGTCAATGTCTGGTCAATGTCGCTTGAAATTTTGTCATTGTGTGTTGATAGATGAGTTTATGGTGGTTTCTAATTTGGGGGGGGGGGGGGGGGGGGGGGGGGTTGTGGTTCAATTTTCAAATACTGGCTGTGAAATATGCCTTGGAAGTTGATCAGCTAGCTATATAAGAGTAAAGGCACCATTGTAGTAGTACAAGTACAATACAAGATAGGGTGTAGTAAAAAGGGGTAGTGCAGACTGGAATTTTGAAACAAGAAGAGTTTTTGTAGTGTTGCTGAATGAAGGAAGGAGTTAAAGCTCTCTTAATTTAGTACTAGAGAAATGAGATTCTGCAGCATATTTGTGTTGATTCGTTACTCTTGATTCCTTTTATTATTATAATGGCTTTGTCTTTTACACAACTTAGCAGCGCTACCCTCAACTTTCTTTGGCAGGGGAGGAACTTTGGGGCCTGCTTGGCTACTTTGTTCTGGATATGTAAAATAGAAAAAGGATAAAAACTCTAATAAACATATGTTTTCTTATTAATATATTTTAGATTATATAATCTTGTAAAATAATTATTATACAAAACTAATAATATAAAGTTGATTCATAAATTAATTAATAATAATTTGGCATCAATCTAATATTTAGTTAGATAAGTCAATAATTTCATTGATTTTGTCAAAGATTTAGCCTGTCAAAGGAAATTTAATCCGTATCTTTAGGCTTGTTGATCTTCTTAGATGATCTATCTTTGAGCTTGAGGATTTTCTTAGATGAACGATTCTTGGACATATTGATTGGCTTGTTGTTCAACAACTTGGATTGACCTTTGGTTTGTTGATCGATTAGAACCAACCTCTGGCTTGTTGATTAACTTGTTTAGGTTATTGGCTGGTTGTTCGACTTGGATCAACCTTTGACTTGTTGATTGATTTGGATCGGCCTATTAATCGGCTTGTGGAGTTTTTCTTGAATTTGAGGAGAATGAGTCTACAACTTGCAAGTTGTGAAGAGACTATTAATTCGTTGAAATCTTCATGTTTTTTAGGAGACTAATCTTCGGTTTATAGATGGCAAAAAGACAATCTCAATTTGTTGAAGTCTTCAAATCTTTGAACAGATCAATCTTCATGTTTTTTAGGAGACTAATCTTCAGTTTATAGATGGCAAAAAGACAGTCTCAATTTGTTGAAGTCTTCAAGTCTTTGAACAGATCAATCTTCAACTTGTAGATACTTGTAGATGGGCGAAGAGGCGATCAATTTGTTGAAGAAGAGACGCTCAATTCATTAAAGAAGAGATGATCAATTCATTGGAGAAGAGACATGCAATTTGTTGAAGAAGAGGCTATTAGTTTGTTGGAGTCTCTTGGTTTTTGAAATGATGGGGTGGTCTCCTTTATTTATAAAATTTTGGGAGACCCTATTTGAGCTTGAGCTTGATTGACATTGACCAACTTTTAGGCTCGGACTTAATTTAATTTATTTTTTAATAGACCTTTATTTAAACTTGACCCAATTTACTTTAATAAACTCAGTTGACC

mRNA sequence

AAAAAAAAAAGAACGAGCGAGTAGAGAGGAGTGGGCGTCGAGAATCTTAGAGAAGAGACGCAGAGTGATAGTGGATGAGAGCGAGTGCCTTTCTTCTCTCACTCGCTCTTCTTCATCTCTTACCACCAGAACAATATTCTCTGAAAGCTCCACCAAGTCATGAACCAAGAATCTCATCGCACCAGTCCTTCACCTCTAATGGTGAAGCCTGAATCTCAGGATCGCAAACCCTCATCTGCCGCTGCCGTCTCCAAGAAAATCGTCATCAAGAGCGCCGATATGTTCGGCGACATGCAGAAGGAAGCTATTGACATTGCCATAGCTGCATTTGAGAAGCATTCCGTTGAGAAGGATGTCGCCGAACACATAAAGAAGGAGTTCGATAAGAATCATGGACCCACCTGGCATTGCATCGTCGGTCGTAATTTTGATCTAGAGCTGAATGCTAAATGCTTTGACCTAAAGTTGATATGTCACTTGTTCATATGTGACACACGAGACGAACCATTTTGTTTACTTCTACCTGGATCAGAAAGCAGTTTTACTTTTCAAATCTGGTTGATGATCGTTCTCCCCTTGAAAAGGATGCCACCAATTTGGCGAGCTTGCGTCAATGATGCTACAACTATTTCTTGTATGTATAATCTAGTCTGCCAGTATGTAAATCACCTGGTGTTGCATTTTCTATATTGTAACTAATTTATCACTGGGGAGTAGATTAAATGGTGAAACAAGAATTCCATTTACATAATGTATCAAAAGGTCTCTTTGTCAATATCACTAAAACAGAAGGCTGCAGTACAAGCTTGAAAATGAAAAAGAAAATGCTCTGTCATTGCCAAATGGTCAATGTCTGGTCAATGTCGCTTGAAATTTTGTCATTGTGTGTTGATAGATGAGTTTATGGTGGTTTCTAATTTGGGGGGGGGGGGGGGGGGGGGGGGGGTTGTGGTTCAATTTTCAAATACTGGCTGTGAAATATGCCTTGGAAGTTGATCAGCTAGCTATATAAGAGTAAAGGCACCATTGTAGTAGTACAAGTACAATACAAGATAGGGTGTAGTAAAAAGGGGTAGTGCAGACTGGAATTTTGAAACAAGAAGAGTTTTTGTAGTGTTGCTGAATGAAGGAAGGAGTTAAAGCTCTCTTAATTTAGTACTAGAGAAATGAGATTCTGCAGCATATTTGTGTTGATTCGTTACTCTTGATTCCTTTTATTATTATAATGGCTTTGTCTTTTACACAACTTAGCAGCGCTACCCTCAACTTTCTTTGGCAGGGGAGGAACTTTGGGGCCTGCTTGGCTACTTTGTTCTGGATATGTAAAATAGAAAAAGGATAAAAACTCTAATAAACATATGTTTTCTTATTAATATATTTTAGATTATATAATCTTGTAAAATAATTATTATACAAAACTAATAATATAAAGTTGATTCATAAATTAATTAATAATAATTTGGCATCAATCTAATATTTAGTTAGATAAGTCAATAATTTCATTGATTTTGTCAAAGATTTAGCCTGTCAAAGGAAATTTAATCCGTATCTTTAGGCTTGTTGATCTTCTTAGATGATCTATCTTTGAGCTTGAGGATTTTCTTAGATGAACGATTCTTGGACATATTGATTGGCTTGTTGTTCAACAACTTGGATTGACCTTTGGTTTGTTGATCGATTAGAACCAACCTCTGGCTTGTTGATTAACTTGTTTAGGTTATTGGCTGGTTGTTCGACTTGGATCAACCTTTGACTTGTTGATTGATTTGGATCGGCCTATTAATCGGCTTGTGGAGTTTTTCTTGAATTTGAGGAGAATGAGTCTACAACTTGCAAGTTGTGAAGAGACTATTAATTCGTTGAAATCTTCATGTTTTTTAGGAGACTAATCTTCGGTTTATAGATGGCAAAAAGACAATCTCAATTTGTTGAAGTCTTCAAATCTTTGAACAGATCAATCTTCATGTTTTTTAGGAGACTAATCTTCAGTTTATAGATGGCAAAAAGACAGTCTCAATTTGTTGAAGTCTTCAAGTCTTTGAACAGATCAATCTTCAACTTGTAGATACTTGTAGATGGGCGAAGAGGCGATCAATTTGTTGAAGAAGAGACGCTCAATTCATTAAAGAAGAGATGATCAATTCATTGGAGAAGAGACATGCAATTTGTTGAAGAAGAGGCTATTAGTTTGTTGGAGTCTCTTGGTTTTTGAAATGATGGGGTGGTCTCCTTTATTTATAAAATTTTGGGAGACCCTATTTGAGCTTGAGCTTGATTGACATTGACCAACTTTTAGGCTCGGACTTAATTTAATTTATTTTTTAATAGACCTTTATTTAAACTTGACCCAATTTACTTTAATAAACTCAGTTGACC

Coding sequence (CDS)

ATGAACCAAGAATCTCATCGCACCAGTCCTTCACCTCTAATGGTGAAGCCTGAATCTCAGGATCGCAAACCCTCATCTGCCGCTGCCGTCTCCAAGAAAATCGTCATCAAGAGCGCCGATATGTTCGGCGACATGCAGAAGGAAGCTATTGACATTGCCATAGCTGCATTTGAGAAGCATTCCGTTGAGAAGGATGTCGCCGAACACATAAAGAAGGAGTTCGATAAGAATCATGGACCCACCTGGCATTGCATCGTCGGTCGTAATTTTGATCTAGAGCTGAATGCTAAATGCTTTGACCTAAAGTTGATATGTCACTTGTTCATATGTGACACACGAGACGAACCATTTTGTTTACTTCTACCTGGATCAGAAAGCAGTTTTACTTTTCAAATCTGGTTGATGATCGTTCTCCCCTTGAAAAGGATGCCACCAATTTGGCGAGCTTGCGTCAATGATGCTACAACTATTTCTTGTATGTATAATCTAGTCTGCCAGTATGTAAATCACCTGGTGTTGCATTTTCTATATTGTAACTAA

Protein sequence

MNQESHRTSPSPLMVKPESQDRKPSSAAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNFDLELNAKCFDLKLICHLFICDTRDEPFCLLLPGSESSFTFQIWLMIVLPLKRMPPIWRACVNDATTISCMYNLVCQYVNHLVLHFLYCN

Homology

[Close]

BLAST of Cla97C05G087750 vs. NCBI nr
Match: XP_038904701.1 (dynein light chain 1, cytoplasmic-like [Benincasa hispida])

HSP 1 Score: 166.0 bits (419), Expect = 3.0e-37
Identity = 82/90 (91.11%), Postives = 86/90 (95.56%), Query Frame = 0


Query: 1  MNQESHRTSPSPLMVKPESQDRKPSSAAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKH 60
          MNQESHR++P PLMVKPES DRKPSSAAAVSKKIVIKSADMF DMQKEAIDIAIAAFEKH
Sbjct: 1  MNQESHRSNPPPLMVKPESDDRKPSSAAAVSKKIVIKSADMFSDMQKEAIDIAIAAFEKH 60

Query: 61 SVEKDVAEHIKKEFDKNHGPTWHCIVGRNF 91
          SVEKD+AE IKK+FDKNHGPTWHCIVGRNF
Sbjct: 61 SVEKDIAEQIKKQFDKNHGPTWHCIVGRNF 90

[Close]

BLAST of Cla97C05G087750 vs. NCBI nr
Match: KAG6597532.1 (Dynein light chain 1, cytoplasmic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 161.4 bits (407), Expect = 7.3e-36
Identity = 79/101 (78.22%), Postives = 88/101 (87.13%), Query Frame = 0


Query: 1   MNQESHRTSPSPLMVKPESQDRKPSSAAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKH 60
           MN +S R++PSPLMVKPES+DRKPSSAA V KKIVIKSADMFGDMQKEA+DIAIAAFEKH
Sbjct: 1   MNHDSKRSNPSPLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH 60

Query: 61  SVEKDVAEHIKKEFDKNHGPTWHCIVGRNFDLELNAKCFDL 102
           SVEKDVAE IKKEFDK HGPTWHC++GRNF    ++ C  L
Sbjct: 61  SVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGSVFHSLCESL 101

[Close]

BLAST of Cla97C05G087750 vs. NCBI nr
Match: KAG7028990.1 (Dynein light chain 1, cytoplasmic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 159.1 bits (401), Expect = 3.6e-35
Identity = 77/90 (85.56%), Postives = 84/90 (93.33%), Query Frame = 0


Query: 1  MNQESHRTSPSPLMVKPESQDRKPSSAAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKH 60
          MN +S R++PSPLMVKPES+DRKPSSAA V KKIVIKSADMFGDMQKEA+DIAIAAFEKH
Sbjct: 1  MNHDSKRSNPSPLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH 60

Query: 61 SVEKDVAEHIKKEFDKNHGPTWHCIVGRNF 91
          SVEKDVAE IKKEFDK HGPTWHC++GRNF
Sbjct: 61 SVEKDVAEQIKKEFDKRHGPTWHCVIGRNF 90

[Close]

BLAST of Cla97C05G087750 vs. NCBI nr
Match: XP_022945423.1 (dynein light chain 1, cytoplasmic-like [Cucurbita moschata])

HSP 1 Score: 159.1 bits (401), Expect = 3.6e-35
Identity = 77/90 (85.56%), Postives = 84/90 (93.33%), Query Frame = 0


Query: 1  MNQESHRTSPSPLMVKPESQDRKPSSAAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKH 60
          MN +S R++PSPLMVKPES+DRKPSSAA V KKIVIKSADMFGDMQKEA+DIAIAAFEKH
Sbjct: 1  MNHDSKRSNPSPLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH 60

Query: 61 SVEKDVAEHIKKEFDKNHGPTWHCIVGRNF 91
          SVEKDVAE IKKEFDK HGPTWHC++GRNF
Sbjct: 61 SVEKDVAEQIKKEFDKRHGPTWHCVIGRNF 90

[Close]

BLAST of Cla97C05G087750 vs. NCBI nr
Match: XP_022955505.1 (dynein 8 kDa light chain, flagellar outer arm-like [Cucurbita moschata])

HSP 1 Score: 156.4 bits (394), Expect = 2.3e-34
Identity = 79/91 (86.81%), Postives = 86/91 (94.51%), Query Frame = 0


Query: 1  MNQESHRTSPSPLMVKPESQDRKPSS-AAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEK 60
          MNQES R++P+PLMVKPES+DRK SS AAA +KKIVIKSADMFGDMQKEA+DIAIAAFEK
Sbjct: 1  MNQESKRSNPNPLMVKPESEDRKASSVAAAAAKKIVIKSADMFGDMQKEAVDIAIAAFEK 60

Query: 61 HSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF 91
          HSVEKDVAEHIKKEFD+ HGPTWHCIVGRNF
Sbjct: 61 HSVEKDVAEHIKKEFDQRHGPTWHCIVGRNF 91

[Close]

BLAST of Cla97C05G087750 vs. ExPASy Swiss-Prot
Match: Q22799 (Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 7.9e-17
Identity = 40/61 (65.57%), Postives = 50/61 (81.97%), Query Frame = 0


Query: 30 VSKKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRN 89
          V +K VIK+ADM  DMQ++AID A  A EK+++EKD+A +IKKEFDK + PTWHCIVGRN
Sbjct: 2  VDRKAVIKNADMSDDMQQDAIDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRN 61

Query: 90 F 91
          F
Sbjct: 62 F 62

[Close]

BLAST of Cla97C05G087750 vs. ExPASy Swiss-Prot
Match: Q39580 (Dynein 8 kDa light chain, flagellar outer arm OS=Chlamydomonas reinhardtii OX=3055 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.0e-16
Identity = 39/63 (61.90%), Postives = 50/63 (79.37%), Query Frame = 0


Query: 28 AAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVG 87
          A+ S K VIK+ADM  +MQ +A+D A  A EK+++EKD+A +IKKEFD+ H PTWHCIVG
Sbjct: 2  ASGSSKAVIKNADMSEEMQADAVDCATQALEKYNIEKDIAAYIKKEFDRKHNPTWHCIVG 61

Query: 88 RNF 91
          RNF
Sbjct: 62 RNF 64

[Close]

BLAST of Cla97C05G087750 vs. ExPASy Swiss-Prot
Match: Q3MHR3 (Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.0e-16
Identity = 38/59 (64.41%), Postives = 49/59 (83.05%), Query Frame = 0


Query: 32 KKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF 91
          +K VIK+ADM  DMQ++A+D A  A EK+++EKD+A +IKKEFDK + PTWHCIVGRNF
Sbjct: 4  RKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNF 62

[Close]

BLAST of Cla97C05G087750 vs. ExPASy Swiss-Prot
Match: Q96FJ2 (Dynein light chain 2, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL2 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.0e-16
Identity = 38/59 (64.41%), Postives = 49/59 (83.05%), Query Frame = 0


Query: 32 KKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF 91
          +K VIK+ADM  DMQ++A+D A  A EK+++EKD+A +IKKEFDK + PTWHCIVGRNF
Sbjct: 4  RKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNF 62

[Close]

BLAST of Cla97C05G087750 vs. ExPASy Swiss-Prot
Match: Q9D0M5 (Dynein light chain 2, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll2 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.0e-16
Identity = 38/59 (64.41%), Postives = 49/59 (83.05%), Query Frame = 0


Query: 32 KKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF 91
          +K VIK+ADM  DMQ++A+D A  A EK+++EKD+A +IKKEFDK + PTWHCIVGRNF
Sbjct: 4  RKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNF 62

[Close]

BLAST of Cla97C05G087750 vs. ExPASy TrEMBL
Match: A0A6J1G0U9 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111449637 PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.8e-35
Identity = 77/90 (85.56%), Postives = 84/90 (93.33%), Query Frame = 0


Query: 1  MNQESHRTSPSPLMVKPESQDRKPSSAAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKH 60
          MN +S R++PSPLMVKPES+DRKPSSAA V KKIVIKSADMFGDMQKEA+DIAIAAFEKH
Sbjct: 1  MNHDSKRSNPSPLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH 60

Query: 61 SVEKDVAEHIKKEFDKNHGPTWHCIVGRNF 91
          SVEKDVAE IKKEFDK HGPTWHC++GRNF
Sbjct: 61 SVEKDVAEQIKKEFDKRHGPTWHCVIGRNF 90

[Close]

BLAST of Cla97C05G087750 vs. ExPASy TrEMBL
Match: A0A6J1GVA3 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111457511 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 1.1e-34
Identity = 79/91 (86.81%), Postives = 86/91 (94.51%), Query Frame = 0


Query: 1  MNQESHRTSPSPLMVKPESQDRKPSS-AAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEK 60
          MNQES R++P+PLMVKPES+DRK SS AAA +KKIVIKSADMFGDMQKEA+DIAIAAFEK
Sbjct: 1  MNQESKRSNPNPLMVKPESEDRKASSVAAAAAKKIVIKSADMFGDMQKEAVDIAIAAFEK 60

Query: 61 HSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF 91
          HSVEKDVAEHIKKEFD+ HGPTWHCIVGRNF
Sbjct: 61 HSVEKDVAEHIKKEFDQRHGPTWHCIVGRNF 91

[Close]

BLAST of Cla97C05G087750 vs. ExPASy TrEMBL
Match: A0A6J1IQ69 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111479508 PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 7.4e-34
Identity = 76/90 (84.44%), Postives = 83/90 (92.22%), Query Frame = 0


Query: 1   MNQESHRTSPSPLMVKPESQDRKPSSAAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKH 60
           MNQES R++P+PLMVKPES+DRK SS AA +KKIVIKSADMFG MQKEA+DIAIAAFEKH
Sbjct: 29  MNQESKRSNPNPLMVKPESEDRKASSVAAAAKKIVIKSADMFGHMQKEAVDIAIAAFEKH 88

Query: 61  SVEKDVAEHIKKEFDKNHGPTWHCIVGRNF 91
           SVEKDVAE IKKEFD+ HGPTWHCIVGRNF
Sbjct: 89  SVEKDVAEQIKKEFDQRHGPTWHCIVGRNF 118

[Close]

BLAST of Cla97C05G087750 vs. ExPASy TrEMBL
Match: A0A6J1I9I2 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111472324 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 2.1e-33
Identity = 76/90 (84.44%), Postives = 83/90 (92.22%), Query Frame = 0


Query: 1  MNQESHRTSPSPLMVKPESQDRKPSSAAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKH 60
          MN +S R++PS LMVKPES+DRKPSSAA V KKIVIKSADMFGDMQKEA+DIAIAAFEKH
Sbjct: 1  MNHDSKRSNPS-LMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH 60

Query: 61 SVEKDVAEHIKKEFDKNHGPTWHCIVGRNF 91
          SVEKDVAE IKKEFDK HGPTWHC++GRNF
Sbjct: 61 SVEKDVAEQIKKEFDKRHGPTWHCVIGRNF 89

[Close]

BLAST of Cla97C05G087750 vs. ExPASy TrEMBL
Match: A0A6J1IC60 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111472324 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 2.1e-33
Identity = 76/90 (84.44%), Postives = 83/90 (92.22%), Query Frame = 0


Query: 1  MNQESHRTSPSPLMVKPESQDRKPSSAAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKH 60
          MN +S R++PS LMVKPES+DRKPSSAA V KKIVIKSADMFGDMQKEA+DIAIAAFEKH
Sbjct: 1  MNHDSKRSNPS-LMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH 60

Query: 61 SVEKDVAEHIKKEFDKNHGPTWHCIVGRNF 91
          SVEKDVAE IKKEFDK HGPTWHC++GRNF
Sbjct: 61 SVEKDVAEQIKKEFDKRHGPTWHCVIGRNF 89

[Close]

BLAST of Cla97C05G087750 vs. TAIR 10
Match: AT4G15930.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 101.3 bits (251), Expect = 8.3e-22
Identity = 48/59 (81.36%), Postives = 54/59 (91.53%), Query Frame = 0


Query: 32 KKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF 91
          K+ VIKSADM  DMQKEAI+IAI+AFEK+SVEKD+AE+IKKEFDK HG TWHCIVGRNF
Sbjct: 38 KRAVIKSADMKDDMQKEAIEIAISAFEKYSVEKDIAENIKKEFDKKHGATWHCIVGRNF 96

[Close]

BLAST of Cla97C05G087750 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 52.0 bits (123), Expect = 5.8e-07
Identity = 32/67 (47.76%), Postives = 41/67 (61.19%), Query Frame = 0


Query: 27  AAAVSKKIVIKSADMFGDMQKEAIDIA---IAAFEKHSVEKDVAEHIKKEFDKNHGPTWH 86
           AAA    + I +ADM G MQ  A   A   + + EK S  K +A ++KKEFDK +GP WH
Sbjct: 110 AAAEMLTVRILAADMPGFMQAHAFRCARMTLDSLEKFS-SKHMAFNLKKEFDKGYGPAWH 169

Query: 87  CIVGRNF 91
           CIVG +F
Sbjct: 170 CIVGSSF 175

[Close]

BLAST of Cla97C05G087750 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 48.5 bits (114), Expect = 6.4e-06
Identity = 25/60 (41.67%), Postives = 36/60 (60.00%), Query Frame = 0


Query: 33 KIVIKSADMFGDMQKEAIDIAIAAFEKHSVE--KDVAEHIKKEFDKNHGPTWHCIVGRNF 91
          K +++ +DM   MQ +A+  A  A +   V   K +A HIKKEFD+ +G  W C+VG NF
Sbjct: 5  KAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVVGSNF 64

[Close]

BLAST of Cla97C05G087750 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 46.2 bits (108), Expect = 3.2e-05
Identity = 24/60 (40.00%), Postives = 34/60 (56.67%), Query Frame = 0


Query: 33 KIVIKSADMFGDMQKEAIDIAIAAFEKHSV--EKDVAEHIKKEFDKNHGPTWHCIVGRNF 91
          K  ++  DM   MQ +A+ IA  + +   V     +A HIKKEFD+ +G  W C+VG NF
Sbjct: 5  KAKVEETDMPVKMQMQAMKIASQSLDLFDVFDSISIAAHIKKEFDERYGSGWQCVVGTNF 64

[Close]

BLAST of Cla97C05G087750 vs. TAIR 10
Match: AT4G27360.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 44.7 bits (104), Expect = 9.3e-05
Identity = 23/60 (38.33%), Postives = 36/60 (60.00%), Query Frame = 0


Query: 33 KIVIKSADMFGDMQKEAIDIAIAAFEKHSVEK--DVAEHIKKEFDKNHGPTWHCIVGRNF 91
          K V+   DM   M+++A+ +A  A +   V +   +A  IKKEFD+++G  W CIVG +F
Sbjct: 5  KAVMGDTDMKQTMKEDALSLASKALDCFDVTEPTQIARFIKKEFDRSYGSGWQCIVGTHF 64

The following BLAST results are available for this feature:

BLAST of Cla97C05G087750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904701.1	3.0e-37	91.11	dynein light chain 1, cytoplasmic-like [Benincasa hispida]	[more]
KAG6597532.1	7.3e-36	78.22	Dynein light chain 1, cytoplasmic, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7028990.1	3.6e-35	85.56	Dynein light chain 1, cytoplasmic [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022945423.1	3.6e-35	85.56	dynein light chain 1, cytoplasmic-like [Cucurbita moschata]	[more]
XP_022955505.1	2.3e-34	86.81	dynein 8 kDa light chain, flagellar outer arm-like [Cucurbita moschata]	[more]

BLAST of Cla97C05G087750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q22799	7.9e-17	65.57	Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=...	[more]
Q39580	3.0e-16	61.90	Dynein 8 kDa light chain, flagellar outer arm OS=Chlamydomonas reinhardtii OX=30...	[more]
Q3MHR3	3.0e-16	64.41	Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1	[more]
Q96FJ2	3.0e-16	64.41	Dynein light chain 2, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL2 PE=1 SV=1	[more]
Q9D0M5	3.0e-16	64.41	Dynein light chain 2, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll2 PE=1 SV=1	[more]

BLAST of Cla97C05G087750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G0U9	1.8e-35	85.56	Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111449637 PE=3 SV=1	[more]
A0A6J1GVA3	1.1e-34	86.81	Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111457511 PE=3 SV=1	[more]
A0A6J1IQ69	7.4e-34	84.44	Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111479508 PE=3 SV=1	[more]
A0A6J1I9I2	2.1e-33	84.44	Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111472324 PE=3 SV=1	[more]
A0A6J1IC60	2.1e-33	84.44	Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111472324 PE=3 SV=1	[more]

BLAST of Cla97C05G087750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15930.1	8.3e-22	81.36	Dynein light chain type 1 family protein	[more]
AT5G20110.1	5.8e-07	47.76	Dynein light chain type 1 family protein	[more]
AT1G52240.2	6.4e-06	41.67	RHO guanyl-nucleotide exchange factor 11	[more]
AT3G16120.1	3.2e-05	40.00	Dynein light chain type 1 family protein	[more]
AT4G27360.1	9.3e-05	38.33	Dynein light chain type 1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 29..110 e-value: 1.5E-25 score: 100.9
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 33..94 e-value: 1.6E-22 score: 79.7
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 15..170
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10	Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	coord: 29..109 e-value: 2.3E-25 score: 90.6
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 30..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	PANTHER	PTHR11886:SF35	DYNEIN LIGHT CHAIN 2, CYTOPLASMIC	coord: 15..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G087750.2	Cla97C05G087750.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0030286	dynein complex
cellular_component	GO:0005874	microtubule
molecular_function	GO:0045505	dynein intermediate chain binding
molecular_function	GO:0051959	dynein light intermediate chain binding