Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGAAGGTATTTTACATATTAGAGGATATCATGAATCTCCAATTACGAACCAAATTGGGGGGCACTCGTTTTCTGTGGCCACGGCCGTTCTTTGTGTATATATCGAGAGATCGAAGAGAAGATGCTAAACAGAAGATCCCGCTCTGATGTGCGATGACCAAGTTTTGGTAATGGGAAGTGGAGTAATGGGTTCTCTTCCATTTGACGGCACTAATTAAGCACGCATCTCCTAATTTCTCTCCATTTGGCCGTCGCTTCCAACTTTTTTCTGTGCGCCGATTCTCGGCTCTACTCTTTGAAGCTCGATTTCGTGGTTTGAATGATTTGGGGAACCTGGAGAAGATTAGGGATGATGGGTGTTTGAGAGCTGAGGAAGCGAAGCTATGGGTACCGGTTCCAATTCAAACAATGATAATAACAACTCAGTAGGGTGGAACAGAGCTGGGAGTTTGATAATGAAGACTTTGGTACTGGTTGGAGGTGCCCTTTTGCTTAAACGCCTTACTAAGTCTACAACGCGATGGGATCATGCCCGCTTTGTTTCTCAGTCCCTTTCTGGCGAAAAGGTTTCTGATTTCAACCTTCTTGCAAAACCCCAATTGCGTTACACTCTTTTCCTTTCTGAATGTCTTGTTTTCTTGTTCTTGTTCTTTTATTTATTTATTTAGTTATTTTATTTATTTATTTATTATTATTTTTTAATAGTTTTCGAAGGAACAAGCTGCTAGGGATCCTGATAATTACTTTAATATCAGGTACGTAATATGTGAATGCTGTTTAGTTGCTGTGAATTGTTCGATATCTAGTCCTCTACTGAATGATGAACCCCTTTTAAAATTCTATTTAACTAGGGCTTCATTGTCCCCTCTGAATGATGAGTGATTTTGATTCTTGTGTTTTAGAATGATTACGTGCCCTGCAGCAGAAATGGTCGATGGTTCTACGGTGTTATACTTCGAACAAGTGAGTCTAGCACTCTTCTCCTGCTTGGTAATATTCCATTTAGCAGTTCTCTTTATCAGTCCTCATTTTGTTTTGTGTTTTGATAGGCTTTCTCCAGAACTCCTCAAAAACCCTTTCGCCAGGTATTGTTATTTTCTGACCCTCTTCCCCTTGAAATTTGGAATTTATCAAGGAAAAGAAAGCTAACCATCGATGAACTCCTATGTTTAGTTTGCTGAACGTTCCTTCATTATACCTATTATAATAATTCAATTAGTTCTACGGTTGCAGAGATTTTATACGGTGAAGCCTTGTTCAAAAGAGATGAAATGTGATGTGGAGGTGAGTACATAATGCTGTTTTGTAGCTGGTGTGAACGGATGATATATATTCCTATGCTATAAATTTCTGAAGGTCTATAGGTGTTGGTATGGTTAATTGTAGCATTTGCAACCAACATTATGGCTTGCTTGTAGTGTGTAACATGCATATTACGAAGAGTTTCTTACATTTGTTCACTTTGCAGCTAAGCTCATACGCCATTCGGGAAATGGAGGAGTACAAGAACTTTTGTGATCGGACAAAAGACCAACGTCCTCTTCCCGAAGAAATTGTTGGGGTTAGCCATCCGTTTAAGACTTCCATCAGATTTTCTATTGCTTGAATATAATTATACAAGTTTAACTCAAAATATGTTATTTTAGCTTTTCAATTGTCCTACTCTTAGTCCTATACCTGACCTACCTAATCTCTATTTTACTTGAGAATATATGGCACAGAGTTCTCTTAGAGCCGCTTAAACTCAGAATAGTACCTGGCCTTAACCTGTCCAAATTTAGTGCCCAATTTGATCAACTTTGTTTTTACCAGGGCCTCAAATCTATGTATATACATTAATTTTTCATTGTTGGATCAAGTAAAAAGCTGAAGTTTGGTTCTGAGCAGGGAACTAAACTCAAGTAAAAGTGGGATTTACTAGTGAACTTAACATGGCTTCACAGTTAAGACTTGAGAAAATAAAAAAATGTGAATATGAGCATGGATATTGGACGACATTACCAAACCATCCACTGAAGAGAACAAAGTTTGGTAGTCTCAGTAAGGCAGTAGGTTGAACCATTGGAACTGCAGCTGTGAATCAGACTGTAGATTTGAATGTATGGATATATGAGTTTGATGCTGATCGTAATTACTTGGTCTGGATTTTGAATTAGCGGTTTTCTATCTTTTCATCAATTTATTGGCCTGGTCAGGTTCCTTTTCTAGTTTTCTTACAGCAAGTTCTAAATCTACTGAGTAATGATACCCCATTAGTGCATAGAATGAGCGGTTAGGTGATGAGATCTACTCAGATTAAGTTAAAACAGGTCAACATAAGTTACTATACCGCAGCAAATGGTGAAGATAATCATGGTTGTGAAAAATAGTGAAGAAGTAGACATTAGAGTCTTGATGCCTCCGAGGCTATCTATCTATGTAAATGGTTTGTAGTTTGAATGATTTGACCTTGCTCTCATTCAATATCATCTTGCTTGAATCATACCGGAGTTTTTTGTGAATCTTTTACAAAGCTCTCGTCTATAGTTTTGTGGAGTTTATAAGAACATCATTATTATTTTTACTGTAAGATCAGAACGAAATCCATTCTTGTTTGTAAGGTATTTCGTACAATAGGTATTTCATCATTCTTAGATTAAGTTCTGTTATTCACTGAAACTGAATTGGATGTAGCTGAATGAATCTCATACAAATCTAGATTTTTATGCACAGGATATTGCGGAGCATTTGACTACATTACATCTTAAACGTTGTGATCGTGGAAAACGTTGCTTGTATGAAGGTTCAACTCCTCCTGGTGGTTTTCCAAATTCATGGGTAAGATCATCCGGATATCTATGTTCATCATTCCATATAATTTGTTTGGTTTTTCTTATCTGTGAGAATGCGAAGAGTAAGACTCAAAAATTAGTTATCCCTACTGCAAATGTTCCAGTAATAAGTATTACTCGCCTTAAGACTCAAAAATTAGTTATCCCTACTGCAAATGTTCCAGTAATAAGTATTACTCGCCTTCCTTTACCATTGGCCTTTGTTATTTGACAGAATGGAGCAGCCTACTGTACTTCCGAAATTGCTATCCTAAAGAATAATGAAGTACATACCTGGGAAAGGGGTTACGATGAAGATGGAAACCAGGTTTAATCCGTTTTACATACTTCGTATTTCAATTTCACAAGAGAGAAAATGTTGTAAAGTGGTATCTACGGGAGGGGTGGGGATGAGCCTCAAATAAATTTAATGTATGATCTGCTGCTCATTTCAGGTTTGGGGAACAAAAGAAGGACCTTACGAGTTCAAGCCAATTCCAGCCTCTAGTCTCAAGGACATGTTTTCTCCATTAAATTTCTCTCAGCAGTCCATGGAGAAAAGAATAGAGGGTTCATTTGTCTTGCAATAATAGTCACCTAATAATTTTTTCTTTATCTAATGTAAATTTCCATCACCTTTTCTATCTGAAATAAAATCTTACATTTGCTTGTTAATTTTTTGTCTCTCTCTCGTTAGTTCTTTGGTCAAATGTTTTCTTATGTGTTATTACAGTCGAAAGCGCCGGTCGAATTCTTGAAGCAGGCAAAATGGCTATCCACTGCTCACTCTAGTAGACCCGCTCATCAGTGGACATACCACAAAGTTCACTTCAGGAGAAACTACACACCAACTGTATCCTCATTTCTCATCTCAGATATATCCCCTGAAGATACACCCATAACTTAGCTTAGTTATATCTTCCAATGTTCAAACATATCATGGCCAGAAAGATAAAGGACTTTTGCAGGAGAGATAGTGAATAAAGGCTTCGCTTATCAGGATAACTTTGAGCAATATTCTTGTCCACCACAGACATTACTTAGAATGATATTGGCTACAATTTCCAGTCTTTTCACCCATTGGAGTGGTGTAACGGTGCTTTACAACATATAAGTTACATAATTGAGAGTACTCCTAAAAAGTGTGTAACTCTTAATTTCTTTGTCTTGTATTATATAAAATATAAAAATTCATAGTTTCGGTGA
mRNA sequence
TTGAAGGTATTTTACATATTAGAGGATATCATGAATCTCCAATTACGAACCAAATTGGGGGGCACTCGTTTTCTGTGGCCACGGCCGTTCTTTGTGTATATATCGAGAGATCGAAGAGAAGATGCTAAACAGAAGATCCCGCTCTGATGTGCGATGACCAAGTTTTGGTAATGGGAAGTGGAGTAATGGGTTCTCTTCCATTTGACGGCACTAATTAAGCACGCATCTCCTAATTTCTCTCCATTTGGCCGTCGCTTCCAACTTTTTTCTGTGCGCCGATTCTCGGCTCTACTCTTTGAAGCTCGATTTCGTGGTTTGAATGATTTGGGGAACCTGGAGAAGATTAGGGATGATGGGTGTTTGAGAGCTGAGGAAGCGAAGCTATGGGTACCGGTTCCAATTCAAACAATGATAATAACAACTCAGTAGGGTGGAACAGAGCTGGGAGTTTGATAATGAAGACTTTGGTACTGGTTGGAGGTGCCCTTTTGCTTAAACGCCTTACTAAGTCTACAACGCGATGGGATCATGCCCGCTTTGTTTCTCAGTCCCTTTCTGGCGAAAAGTTTTCGAAGGAACAAGCTGCTAGGGATCCTGATAATTACTTTAATATCAGAATGATTACGTGCCCTGCAGCAGAAATGGTCGATGGTTCTACGGTGTTATACTTCGAACAAGCTTTCTCCAGAACTCCTCAAAAACCCTTTCGCCAGTTTGCTGAACGTTCCTTCATTATACCTATTATAATAATTCAATTAGTTCTACGGTTGCAGAGATTTTATACGGTGAAGCCTTGTTCAAAAGAGATGAAATGTGATGTGGAGGTGAGTGTTGGTATGGTTAATTGTAGCATTTGCAACCAACATTATGGCTTGCTTGTAGTGTGTAACATGCATATTACGAAGAGTTTCTTACATTTGTTCACTTTGCAGCTAAGCTCATACGCCATTCGGGAAATGGAGGAGTACAAGAACTTTTGTGATCGGACAAAAGACCAACGTCCTCTTCCCGAAGAAATTGTTGGGATCAGAACGAAATCCATTCTTGTTTGTAAGGATATTGCGGAGCATTTGACTACATTACATCTTAAACGTTGTGATCGTGGAAAACGTTGCTTGTATGAAGGTTCAACTCCTCCTGGTGGTTTTCCAAATTCATGGAATGGAGCAGCCTACTGTACTTCCGAAATTGCTATCCTAAAGAATAATGAAGTACATACCTGGGAAAGGGGTTACGATGAAGATGGAAACCAGTCGAAAGCGCCGGTCGAATTCTTGAAGCAGGCAAAATGGCTATCCACTGCTCACTCTAGTAGACCCGCTCATCAGTGGACATACCACAAAGTTCACTTCAGGAGAAACTACACACCAACTGTATCCTCATTTCTCATCTCAGATATATCCCCTGAAGATACACCCATAACTTAGCTTAGTTATATCTTCCAATGTTCAAACATATCATGGCCAGAAAGATAAAGGACTTTTGCAGGAGAGATAGTGAATAAAGGCTTCGCTTATCAGGATAACTTTGAGCAATATTCTTGTCCACCACAGACATTACTTAGAATGATATTGGCTACAATTTCCAGTCTTTTCACCCATTGGAGTGGTGTAACGGTGCTTTACAACATATAAGTTACATAATTGAGAGTACTCCTAAAAAGTGTGTAACTCTTAATTTCTTTGTCTTGTATTATATAAAATATAAAAATTCATAGTTTCGGTGA
Coding sequence (CDS)
ATGGGTACCGGTTCCAATTCAAACAATGATAATAACAACTCAGTAGGGTGGAACAGAGCTGGGAGTTTGATAATGAAGACTTTGGTACTGGTTGGAGGTGCCCTTTTGCTTAAACGCCTTACTAAGTCTACAACGCGATGGGATCATGCCCGCTTTGTTTCTCAGTCCCTTTCTGGCGAAAAGTTTTCGAAGGAACAAGCTGCTAGGGATCCTGATAATTACTTTAATATCAGAATGATTACGTGCCCTGCAGCAGAAATGGTCGATGGTTCTACGGTGTTATACTTCGAACAAGCTTTCTCCAGAACTCCTCAAAAACCCTTTCGCCAGTTTGCTGAACGTTCCTTCATTATACCTATTATAATAATTCAATTAGTTCTACGGTTGCAGAGATTTTATACGGTGAAGCCTTGTTCAAAAGAGATGAAATGTGATGTGGAGGTGAGTGTTGGTATGGTTAATTGTAGCATTTGCAACCAACATTATGGCTTGCTTGTAGTGTGTAACATGCATATTACGAAGAGTTTCTTACATTTGTTCACTTTGCAGCTAAGCTCATACGCCATTCGGGAAATGGAGGAGTACAAGAACTTTTGTGATCGGACAAAAGACCAACGTCCTCTTCCCGAAGAAATTGTTGGGATCAGAACGAAATCCATTCTTGTTTGTAAGGATATTGCGGAGCATTTGACTACATTACATCTTAAACGTTGTGATCGTGGAAAACGTTGCTTGTATGAAGGTTCAACTCCTCCTGGTGGTTTTCCAAATTCATGGAATGGAGCAGCCTACTGTACTTCCGAAATTGCTATCCTAAAGAATAATGAAGTACATACCTGGGAAAGGGGTTACGATGAAGATGGAAACCAGTCGAAAGCGCCGGTCGAATTCTTGAAGCAGGCAAAATGGCTATCCACTGCTCACTCTAGTAGACCCGCTCATCAGTGGACATACCACAAAGTTCACTTCAGGAGAAACTACACACCAACTGTATCCTCATTTCTCATCTCAGATATATCCCCTGAAGATACACCCATAACTTAG
Protein sequence
MGTGSNSNNDNNNSVGWNRAGSLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGEKFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFRQFAERSFIIPIIIIQLVLRLQRFYTVKPCSKEMKCDVEVSVGMVNCSICNQHYGLLVVCNMHITKSFLHLFTLQLSSYAIREMEEYKNFCDRTKDQRPLPEEIVGIRTKSILVCKDIAEHLTTLHLKRCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDEDGNQSKAPVEFLKQAKWLSTAHSSRPAHQWTYHKVHFRRNYTPTVSSFLISDISPEDTPIT
Homology
BLAST of Cla97C03G055220 vs. NCBI nr
Match:
XP_038895463.1 (chromophore lyase CRL, chloroplastic [Benincasa hispida])
HSP 1 Score: 425.6 bits (1093), Expect = 4.0e-115
Identity = 224/301 (74.42%), Postives = 225/301 (74.75%), Query Frame = 0
Query: 1 MGTGSNSNNDNNNSVGWNRAGSLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60
MG SNSNNDNNNSVGWNRAG LIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE
Sbjct: 1 MGMDSNSNNDNNNSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60
Query: 61 KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFRQFAERSFIIPI 120
KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFR
Sbjct: 61 KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFR----------- 120
Query: 121 IIIQLVLRLQRFYTVKPCSKEMKCDVEVSVGMVNCSICNQHYGLLVVCNMHITKSFLHLF 180
QRFYTVKPCSKEMKCDVE
Sbjct: 121 ---------QRFYTVKPCSKEMKCDVE--------------------------------- 180
Query: 181 TLQLSSYAIREMEEYKNFCDRTKDQRPLPEEIVGIRTKSILVCKDIAEHLTTLHLKRCDR 240
LSSYAIREMEEYKNFCDRTKDQRPLPEEIVG DIAEHLTTLHLKRCDR
Sbjct: 181 ---LSSYAIREMEEYKNFCDRTKDQRPLPEEIVG----------DIAEHLTTLHLKRCDR 235
Query: 241 GKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDEDGNQ----SKAPVE 298
GKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDEDGNQ + P E
Sbjct: 241 GKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDEDGNQVWGTKEGPYE 235
BLAST of Cla97C03G055220 vs. NCBI nr
Match:
XP_022137217.1 (chromophore lyase CRL, chloroplastic [Momordica charantia])
HSP 1 Score: 421.0 bits (1081), Expect = 9.9e-114
Identity = 220/301 (73.09%), Postives = 225/301 (74.75%), Query Frame = 0
Query: 1 MGTGSNSNNDNNNSVGWNRAGSLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60
MGT SNSNNDNN+SVGWNRAG LIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE
Sbjct: 1 MGTNSNSNNDNNSSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60
Query: 61 KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFRQFAERSFIIPI 120
KFSKEQA+RDPDNYFNIRM TCPAAEMVDGSTVLYFEQAFSRTPQKPFR
Sbjct: 61 KFSKEQASRDPDNYFNIRMTTCPAAEMVDGSTVLYFEQAFSRTPQKPFR----------- 120
Query: 121 IIIQLVLRLQRFYTVKPCSKEMKCDVEVSVGMVNCSICNQHYGLLVVCNMHITKSFLHLF 180
QRFYTVKPCSKEMKCDVE
Sbjct: 121 ---------QRFYTVKPCSKEMKCDVE--------------------------------- 180
Query: 181 TLQLSSYAIREMEEYKNFCDRTKDQRPLPEEIVGIRTKSILVCKDIAEHLTTLHLKRCDR 240
LSSYAIR+MEEYKNFCDRTKDQRPLPEEIVG DIAEHLTTLHLKRCDR
Sbjct: 181 ---LSSYAIRDMEEYKNFCDRTKDQRPLPEEIVG----------DIAEHLTTLHLKRCDR 235
Query: 241 GKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDEDGNQ----SKAPVE 298
GKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYD+DGNQ + P E
Sbjct: 241 GKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDDDGNQVWGTKEGPYE 235
BLAST of Cla97C03G055220 vs. NCBI nr
Match:
XP_008440119.1 (PREDICTED: chromophore lyase CRL, chloroplastic [Cucumis melo])
HSP 1 Score: 416.4 bits (1069), Expect = 2.4e-112
Identity = 221/301 (73.42%), Postives = 223/301 (74.09%), Query Frame = 0
Query: 1 MGTGSNSNNDNNNSVGWNRAGSLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60
MGT S NDNNNSVGWNRAG LIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE
Sbjct: 1 MGTNS---NDNNNSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60
Query: 61 KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFRQFAERSFIIPI 120
KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFR
Sbjct: 61 KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFR----------- 120
Query: 121 IIIQLVLRLQRFYTVKPCSKEMKCDVEVSVGMVNCSICNQHYGLLVVCNMHITKSFLHLF 180
QRFYTVKPCSKEMKCDVE
Sbjct: 121 ---------QRFYTVKPCSKEMKCDVE--------------------------------- 180
Query: 181 TLQLSSYAIREMEEYKNFCDRTKDQRPLPEEIVGIRTKSILVCKDIAEHLTTLHLKRCDR 240
LSSYAIREMEEYKNFCDRTKDQRPLPEEIVG DIAEHLTTLHLKRCDR
Sbjct: 181 ---LSSYAIREMEEYKNFCDRTKDQRPLPEEIVG----------DIAEHLTTLHLKRCDR 232
Query: 241 GKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDEDGNQ----SKAPVE 298
GKRCLYEGSTPPGGFPNSWNGA+YCTSEIAILKNNEVHTWERGYDEDGNQ + P E
Sbjct: 241 GKRCLYEGSTPPGGFPNSWNGASYCTSEIAILKNNEVHTWERGYDEDGNQVWGTKEGPYE 232
BLAST of Cla97C03G055220 vs. NCBI nr
Match:
XP_011652315.1 (chromophore lyase CRL, chloroplastic [Cucumis sativus] >XP_011652316.1 chromophore lyase CRL, chloroplastic [Cucumis sativus] >KGN64442.1 hypothetical protein Csa_014211 [Cucumis sativus])
HSP 1 Score: 414.5 bits (1064), Expect = 9.3e-112
Identity = 220/301 (73.09%), Postives = 223/301 (74.09%), Query Frame = 0
Query: 1 MGTGSNSNNDNNNSVGWNRAGSLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60
MGT S NDNNNSVGWNRAG LIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE
Sbjct: 1 MGTNS---NDNNNSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60
Query: 61 KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFRQFAERSFIIPI 120
KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFR
Sbjct: 61 KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFR----------- 120
Query: 121 IIIQLVLRLQRFYTVKPCSKEMKCDVEVSVGMVNCSICNQHYGLLVVCNMHITKSFLHLF 180
QRFYTVKPCSKEMKCDVE
Sbjct: 121 ---------QRFYTVKPCSKEMKCDVE--------------------------------- 180
Query: 181 TLQLSSYAIREMEEYKNFCDRTKDQRPLPEEIVGIRTKSILVCKDIAEHLTTLHLKRCDR 240
LSSYAIREMEEYKNFCDRTKDQRPLPEEIVG DIAEHLTTLHLKRCDR
Sbjct: 181 ---LSSYAIREMEEYKNFCDRTKDQRPLPEEIVG----------DIAEHLTTLHLKRCDR 232
Query: 241 GKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDEDGNQ----SKAPVE 298
GKRCLYEGSTPPGGFPNSW+GA+YCTSEIAILKNNEVHTWERGYDEDGNQ + P E
Sbjct: 241 GKRCLYEGSTPPGGFPNSWSGASYCTSEIAILKNNEVHTWERGYDEDGNQVWGTKEGPYE 232
BLAST of Cla97C03G055220 vs. NCBI nr
Match:
XP_022923973.1 (chromophore lyase CRL, chloroplastic-like [Cucurbita moschata] >XP_023520394.1 chromophore lyase CRL, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG7019765.1 Chromophore lyase CRL, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 412.5 bits (1059), Expect = 3.5e-111
Identity = 216/303 (71.29%), Postives = 225/303 (74.26%), Query Frame = 0
Query: 1 MGTGSN--SNNDNNNSVGWNRAGSLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLS 60
MG+ S+ SNNDNNN+VGWNRAG LIMKTLVL GGALLLKRLTKSTTRWDHARFVSQSLS
Sbjct: 1 MGSSSDSYSNNDNNNAVGWNRAGGLIMKTLVLFGGALLLKRLTKSTTRWDHARFVSQSLS 60
Query: 61 GEKFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFRQFAERSFII 120
GEKFSKEQAARDP+NYFNIRM+TCPAAEM+DGSTVLYFEQAFSRTPQKPFR
Sbjct: 61 GEKFSKEQAARDPENYFNIRMVTCPAAEMIDGSTVLYFEQAFSRTPQKPFR--------- 120
Query: 121 PIIIIQLVLRLQRFYTVKPCSKEMKCDVEVSVGMVNCSICNQHYGLLVVCNMHITKSFLH 180
QRFYTVKPCSKEMKCDVE
Sbjct: 121 -----------QRFYTVKPCSKEMKCDVE------------------------------- 180
Query: 181 LFTLQLSSYAIREMEEYKNFCDRTKDQRPLPEEIVGIRTKSILVCKDIAEHLTTLHLKRC 240
LSSYAIREMEEYKNFCDRTKDQRPLPEEIVG DIAEHLTTLHLKRC
Sbjct: 181 -----LSSYAIREMEEYKNFCDRTKDQRPLPEEIVG----------DIAEHLTTLHLKRC 237
Query: 241 DRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDEDGNQ----SKAP 298
DRGKRCLYEGSTPPGGFPNSWNGAAYCTSE++ILKNNEVHTWERGYDEDGNQ + P
Sbjct: 241 DRGKRCLYEGSTPPGGFPNSWNGAAYCTSELSILKNNEVHTWERGYDEDGNQVWGTKEGP 237
BLAST of Cla97C03G055220 vs. ExPASy Swiss-Prot
Match:
Q9FI46 (Chromophore lyase CRL, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRL PE=1 SV=1)
HSP 1 Score: 335.5 bits (859), Expect = 7.2e-91
Identity = 173/296 (58.45%), Postives = 204/296 (68.92%), Query Frame = 0
Query: 1 MGTGSNSNNDNNNSVGWNRAGSLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60
MGT S S+ +++++ GW+RA L++KTLVL+GGALL+KRLTKSTTR DHAR VS+SL+GE
Sbjct: 1 MGTESGSDPESSSN-GWSRARGLVVKTLVLIGGALLIKRLTKSTTRRDHARVVSRSLTGE 60
Query: 61 KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFRQFAERSFIIPI 120
KF++EQA+RDPDNYFNIRM++CPAAEMVDGS VLY EQAF RTPQKPFR
Sbjct: 61 KFTREQASRDPDNYFNIRMLSCPAAEMVDGSEVLYLEQAFWRTPQKPFR----------- 120
Query: 121 IIIQLVLRLQRFYTVKPCSKEMKCDVEVSVGMVNCSICNQHYGLLVVCNMHITKSFLHLF 180
QR Y VKPC KE+KCDVEV
Sbjct: 121 ---------QRLYMVKPCPKELKCDVEV-------------------------------- 180
Query: 181 TLQLSSYAIREMEEYKNFCDRTKDQRPLPEEIVGIRTKSILVCKDIAEHLTTLHLKRCDR 240
SSYAIR+ EEYKNFCDR KDQRPLPEE++G DI EHLTT+HL CDR
Sbjct: 181 ----SSYAIRDAEEYKNFCDRPKDQRPLPEEVIG----------DIGEHLTTIHLNCCDR 229
Query: 241 GKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDEDGNQSKAPVE 297
GKRCLYEGST PGGFPNSWNGA+YCTS++A+LKNNE+H W+RG+DE+ NQ P E
Sbjct: 241 GKRCLYEGSTSPGGFPNSWNGASYCTSDLAVLKNNEIHLWDRGFDENRNQVWGPKE 229
BLAST of Cla97C03G055220 vs. ExPASy TrEMBL
Match:
A0A6J1C7M9 (chromophore lyase CRL, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111008735 PE=3 SV=1)
HSP 1 Score: 421.0 bits (1081), Expect = 4.8e-114
Identity = 220/301 (73.09%), Postives = 225/301 (74.75%), Query Frame = 0
Query: 1 MGTGSNSNNDNNNSVGWNRAGSLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60
MGT SNSNNDNN+SVGWNRAG LIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE
Sbjct: 1 MGTNSNSNNDNNSSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60
Query: 61 KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFRQFAERSFIIPI 120
KFSKEQA+RDPDNYFNIRM TCPAAEMVDGSTVLYFEQAFSRTPQKPFR
Sbjct: 61 KFSKEQASRDPDNYFNIRMTTCPAAEMVDGSTVLYFEQAFSRTPQKPFR----------- 120
Query: 121 IIIQLVLRLQRFYTVKPCSKEMKCDVEVSVGMVNCSICNQHYGLLVVCNMHITKSFLHLF 180
QRFYTVKPCSKEMKCDVE
Sbjct: 121 ---------QRFYTVKPCSKEMKCDVE--------------------------------- 180
Query: 181 TLQLSSYAIREMEEYKNFCDRTKDQRPLPEEIVGIRTKSILVCKDIAEHLTTLHLKRCDR 240
LSSYAIR+MEEYKNFCDRTKDQRPLPEEIVG DIAEHLTTLHLKRCDR
Sbjct: 181 ---LSSYAIRDMEEYKNFCDRTKDQRPLPEEIVG----------DIAEHLTTLHLKRCDR 235
Query: 241 GKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDEDGNQ----SKAPVE 298
GKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYD+DGNQ + P E
Sbjct: 241 GKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDDDGNQVWGTKEGPYE 235
BLAST of Cla97C03G055220 vs. ExPASy TrEMBL
Match:
A0A1S3B0Z6 (chromophore lyase CRL, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484677 PE=3 SV=1)
HSP 1 Score: 416.4 bits (1069), Expect = 1.2e-112
Identity = 221/301 (73.42%), Postives = 223/301 (74.09%), Query Frame = 0
Query: 1 MGTGSNSNNDNNNSVGWNRAGSLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60
MGT S NDNNNSVGWNRAG LIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE
Sbjct: 1 MGTNS---NDNNNSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60
Query: 61 KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFRQFAERSFIIPI 120
KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFR
Sbjct: 61 KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFR----------- 120
Query: 121 IIIQLVLRLQRFYTVKPCSKEMKCDVEVSVGMVNCSICNQHYGLLVVCNMHITKSFLHLF 180
QRFYTVKPCSKEMKCDVE
Sbjct: 121 ---------QRFYTVKPCSKEMKCDVE--------------------------------- 180
Query: 181 TLQLSSYAIREMEEYKNFCDRTKDQRPLPEEIVGIRTKSILVCKDIAEHLTTLHLKRCDR 240
LSSYAIREMEEYKNFCDRTKDQRPLPEEIVG DIAEHLTTLHLKRCDR
Sbjct: 181 ---LSSYAIREMEEYKNFCDRTKDQRPLPEEIVG----------DIAEHLTTLHLKRCDR 232
Query: 241 GKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDEDGNQ----SKAPVE 298
GKRCLYEGSTPPGGFPNSWNGA+YCTSEIAILKNNEVHTWERGYDEDGNQ + P E
Sbjct: 241 GKRCLYEGSTPPGGFPNSWNGASYCTSEIAILKNNEVHTWERGYDEDGNQVWGTKEGPYE 232
BLAST of Cla97C03G055220 vs. ExPASy TrEMBL
Match:
A0A0A0LUI3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051790 PE=3 SV=1)
HSP 1 Score: 414.5 bits (1064), Expect = 4.5e-112
Identity = 220/301 (73.09%), Postives = 223/301 (74.09%), Query Frame = 0
Query: 1 MGTGSNSNNDNNNSVGWNRAGSLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60
MGT S NDNNNSVGWNRAG LIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE
Sbjct: 1 MGTNS---NDNNNSVGWNRAGGLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60
Query: 61 KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFRQFAERSFIIPI 120
KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFR
Sbjct: 61 KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFR----------- 120
Query: 121 IIIQLVLRLQRFYTVKPCSKEMKCDVEVSVGMVNCSICNQHYGLLVVCNMHITKSFLHLF 180
QRFYTVKPCSKEMKCDVE
Sbjct: 121 ---------QRFYTVKPCSKEMKCDVE--------------------------------- 180
Query: 181 TLQLSSYAIREMEEYKNFCDRTKDQRPLPEEIVGIRTKSILVCKDIAEHLTTLHLKRCDR 240
LSSYAIREMEEYKNFCDRTKDQRPLPEEIVG DIAEHLTTLHLKRCDR
Sbjct: 181 ---LSSYAIREMEEYKNFCDRTKDQRPLPEEIVG----------DIAEHLTTLHLKRCDR 232
Query: 241 GKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDEDGNQ----SKAPVE 298
GKRCLYEGSTPPGGFPNSW+GA+YCTSEIAILKNNEVHTWERGYDEDGNQ + P E
Sbjct: 241 GKRCLYEGSTPPGGFPNSWSGASYCTSEIAILKNNEVHTWERGYDEDGNQVWGTKEGPYE 232
BLAST of Cla97C03G055220 vs. ExPASy TrEMBL
Match:
A0A6J1EB15 (chromophore lyase CRL, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111431531 PE=3 SV=1)
HSP 1 Score: 412.5 bits (1059), Expect = 1.7e-111
Identity = 216/303 (71.29%), Postives = 225/303 (74.26%), Query Frame = 0
Query: 1 MGTGSN--SNNDNNNSVGWNRAGSLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLS 60
MG+ S+ SNNDNNN+VGWNRAG LIMKTLVL GGALLLKRLTKSTTRWDHARFVSQSLS
Sbjct: 1 MGSSSDSYSNNDNNNAVGWNRAGGLIMKTLVLFGGALLLKRLTKSTTRWDHARFVSQSLS 60
Query: 61 GEKFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFRQFAERSFII 120
GEKFSKEQAARDP+NYFNIRM+TCPAAEM+DGSTVLYFEQAFSRTPQKPFR
Sbjct: 61 GEKFSKEQAARDPENYFNIRMVTCPAAEMIDGSTVLYFEQAFSRTPQKPFR--------- 120
Query: 121 PIIIIQLVLRLQRFYTVKPCSKEMKCDVEVSVGMVNCSICNQHYGLLVVCNMHITKSFLH 180
QRFYTVKPCSKEMKCDVE
Sbjct: 121 -----------QRFYTVKPCSKEMKCDVE------------------------------- 180
Query: 181 LFTLQLSSYAIREMEEYKNFCDRTKDQRPLPEEIVGIRTKSILVCKDIAEHLTTLHLKRC 240
LSSYAIREMEEYKNFCDRTKDQRPLPEEIVG DIAEHLTTLHLKRC
Sbjct: 181 -----LSSYAIREMEEYKNFCDRTKDQRPLPEEIVG----------DIAEHLTTLHLKRC 237
Query: 241 DRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDEDGNQ----SKAP 298
DRGKRCLYEGSTPPGGFPNSWNGAAYCTSE++ILKNNEVHTWERGYDEDGNQ + P
Sbjct: 241 DRGKRCLYEGSTPPGGFPNSWNGAAYCTSELSILKNNEVHTWERGYDEDGNQVWGTKEGP 237
BLAST of Cla97C03G055220 vs. ExPASy TrEMBL
Match:
A0A6J1GRS8 (chromophore lyase CRL, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456870 PE=3 SV=1)
HSP 1 Score: 408.7 bits (1049), Expect = 2.5e-110
Identity = 216/300 (72.00%), Postives = 222/300 (74.00%), Query Frame = 0
Query: 1 MGTGSNSNNDNNNSVGWNRAGSLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60
MG SNS++D NNSVGWNRAG LIMKTLVLVGGAL LKRLTKSTTRWDHAR VSQSLSGE
Sbjct: 1 MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGE 60
Query: 61 KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFRQFAERSFIIPI 120
KFSKEQAARDP+NYFNIRM TCPAAE+VDGSTVLYFEQAFSRTPQKPFR
Sbjct: 61 KFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAFSRTPQKPFR----------- 120
Query: 121 IIIQLVLRLQRFYTVKPCSKEMKCDVEVSVGMVNCSICNQHYGLLVVCNMHITKSFLHLF 180
QRFYTVK CSKEMKCDVE
Sbjct: 121 ---------QRFYTVKLCSKEMKCDVE--------------------------------- 180
Query: 181 TLQLSSYAIREMEEYKNFCDRTKDQRPLPEEIVGIRTKSILVCKDIAEHLTTLHLKRCDR 240
LSSYAIREMEEYKNFCDRTKDQRPLPEEIVG I +DIAEHLTTLHLK CDR
Sbjct: 181 ---LSSYAIREMEEYKNFCDRTKDQRPLPEEIVG-----IFYAQDIAEHLTTLHLKCCDR 239
Query: 241 GKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDEDGNQ---SKAPVEF 298
GKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDEDGNQ +K P EF
Sbjct: 241 GKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEF 239
BLAST of Cla97C03G055220 vs. TAIR 10
Match:
AT5G51020.1 (crumpled leaf )
HSP 1 Score: 335.5 bits (859), Expect = 5.1e-92
Identity = 173/296 (58.45%), Postives = 204/296 (68.92%), Query Frame = 0
Query: 1 MGTGSNSNNDNNNSVGWNRAGSLIMKTLVLVGGALLLKRLTKSTTRWDHARFVSQSLSGE 60
MGT S S+ +++++ GW+RA L++KTLVL+GGALL+KRLTKSTTR DHAR VS+SL+GE
Sbjct: 1 MGTESGSDPESSSN-GWSRARGLVVKTLVLIGGALLIKRLTKSTTRRDHARVVSRSLTGE 60
Query: 61 KFSKEQAARDPDNYFNIRMITCPAAEMVDGSTVLYFEQAFSRTPQKPFRQFAERSFIIPI 120
KF++EQA+RDPDNYFNIRM++CPAAEMVDGS VLY EQAF RTPQKPFR
Sbjct: 61 KFTREQASRDPDNYFNIRMLSCPAAEMVDGSEVLYLEQAFWRTPQKPFR----------- 120
Query: 121 IIIQLVLRLQRFYTVKPCSKEMKCDVEVSVGMVNCSICNQHYGLLVVCNMHITKSFLHLF 180
QR Y VKPC KE+KCDVEV
Sbjct: 121 ---------QRLYMVKPCPKELKCDVEV-------------------------------- 180
Query: 181 TLQLSSYAIREMEEYKNFCDRTKDQRPLPEEIVGIRTKSILVCKDIAEHLTTLHLKRCDR 240
SSYAIR+ EEYKNFCDR KDQRPLPEE++G DI EHLTT+HL CDR
Sbjct: 181 ----SSYAIRDAEEYKNFCDRPKDQRPLPEEVIG----------DIGEHLTTIHLNCCDR 229
Query: 241 GKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDEDGNQSKAPVE 297
GKRCLYEGST PGGFPNSWNGA+YCTS++A+LKNNE+H W+RG+DE+ NQ P E
Sbjct: 241 GKRCLYEGSTSPGGFPNSWNGASYCTSDLAVLKNNEIHLWDRGFDENRNQVWGPKE 229
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038895463.1 | 4.0e-115 | 74.42 | chromophore lyase CRL, chloroplastic [Benincasa hispida] | [more] |
XP_022137217.1 | 9.9e-114 | 73.09 | chromophore lyase CRL, chloroplastic [Momordica charantia] | [more] |
XP_008440119.1 | 2.4e-112 | 73.42 | PREDICTED: chromophore lyase CRL, chloroplastic [Cucumis melo] | [more] |
XP_011652315.1 | 9.3e-112 | 73.09 | chromophore lyase CRL, chloroplastic [Cucumis sativus] >XP_011652316.1 chromopho... | [more] |
XP_022923973.1 | 3.5e-111 | 71.29 | chromophore lyase CRL, chloroplastic-like [Cucurbita moschata] >XP_023520394.1 c... | [more] |
Match Name | E-value | Identity | Description | |
Q9FI46 | 7.2e-91 | 58.45 | Chromophore lyase CRL, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRL PE=1... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1C7M9 | 4.8e-114 | 73.09 | chromophore lyase CRL, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111008... | [more] |
A0A1S3B0Z6 | 1.2e-112 | 73.42 | chromophore lyase CRL, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484677 PE=... | [more] |
A0A0A0LUI3 | 4.5e-112 | 73.09 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051790 PE=3 SV=1 | [more] |
A0A6J1EB15 | 1.7e-111 | 71.29 | chromophore lyase CRL, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC11... | [more] |
A0A6J1GRS8 | 2.5e-110 | 72.00 | chromophore lyase CRL, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=36... | [more] |