Cla97C03G054640 (gene) Watermelon (97103) v2.5

Overview
NameCla97C03G054640
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr03: 3734144 .. 3734359 (-)
RNA-Seq ExpressionCla97C03G054640
SyntenyCla97C03G054640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTCTAAAGTGGAAGAAACACTGAGAAGGAAGCACCAGCAAGTTCAGCCGCCGCAGGCGGCGGCGACGGCGAAACAAATCCAGTGCAATAAAGCCAAGTATCCGAAGTTCAAGAGAAGTAGCTCCGATGTTGAAGAAGATGGCGCCTCTTCCGCCATGCTTTTGCTTGCTTGCATTGCTTTTGCCCCCAATTTTAGTTCCATCGCCGACTGA

mRNA sequence

ATGGTGTCTAAAGTGGAAGAAACACTGAGAAGGAAGCACCAGCAAGTTCAGCCGCCGCAGGCGGCGGCGACGGCGAAACAAATCCAGTGCAATAAAGCCAAGTATCCGAAGTTCAAGAGAAGTAGCTCCGATGTTGAAGAAGATGGCGCCTCTTCCGCCATGCTTTTGCTTGCTTGCATTGCTTTTGCCCCCAATTTTAGTTCCATCGCCGACTGA

Coding sequence (CDS)

ATGGTGTCTAAAGTGGAAGAAACACTGAGAAGGAAGCACCAGCAAGTTCAGCCGCCGCAGGCGGCGGCGACGGCGAAACAAATCCAGTGCAATAAAGCCAAGTATCCGAAGTTCAAGAGAAGTAGCTCCGATGTTGAAGAAGATGGCGCCTCTTCCGCCATGCTTTTGCTTGCTTGCATTGCTTTTGCCCCCAATTTTAGTTCCATCGCCGACTGA

Protein sequence

MVSKVEETLRRKHQQVQPPQAAATAKQIQCNKAKYPKFKRSSSDVEEDGASSAMLLLACIAFAPNFSSIAD
Homology
BLAST of Cla97C03G054640 vs. NCBI nr
Match: KAG6584135.1 (hypothetical protein SDJN03_20067, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019725.1 hypothetical protein SDJN02_18688, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 115.9 bits (289), Expect = 1.4e-22
Identity = 63/72 (87.50%), Postives = 66/72 (91.67%), Query Frame = 0

Query: 1  MVSKVEETLRRKHQQVQPPQ---AAATAKQIQCNKAKYPKFKRSSSDVEEDGASSAMLLL 60
          MVSKVEETLR KHQQVQPPQ   AAATAKQIQCNKAKYPKFKRS S+VEEDGASSAMLLL
Sbjct: 1  MVSKVEETLRMKHQQVQPPQAAEAAATAKQIQCNKAKYPKFKRSCSNVEEDGASSAMLLL 60

Query: 61 ACIAFAPNFSSI 70
          ACIAFAP+FS +
Sbjct: 61 ACIAFAPDFSPV 72

BLAST of Cla97C03G054640 vs. NCBI nr
Match: KGN64384.1 (hypothetical protein Csa_013100 [Cucumis sativus])

HSP 1 Score: 106.7 bits (265), Expect = 8.5e-20
Identity = 60/70 (85.71%), Postives = 62/70 (88.57%), Query Frame = 0

Query: 1  MVSKVEETLRRKHQQVQPPQ-------AAATAKQIQCNKAKYPKFKRSSSDVEEDGASSA 60
          MVSKVEETLRRK+QQV PPQ       AAATAKQIQCNKAKYPKFKRSSS+VEEDGASSA
Sbjct: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA 60

Query: 61 MLLLACIAFA 64
          MLLLACIAFA
Sbjct: 61 MLLLACIAFA 70

BLAST of Cla97C03G054640 vs. NCBI nr
Match: KAG7012298.1 (hypothetical protein SDJN02_25050, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 95.5 bits (236), Expect = 1.9e-16
Identity = 55/72 (76.39%), Postives = 60/72 (83.33%), Query Frame = 0

Query: 1  MVSKVEETLRRKHQQVQPPQAA--ATAKQIQCNKAKYPKFKRSSSDVEEDGASSAMLLLA 60
          MVSKVEE LRRK QQVQ P AA  A AKQIQ NKAKYPKFKRSSSDV +DGASSA+LLLA
Sbjct: 1  MVSKVEEALRRKQQQVQTPHAAAGAAAKQIQFNKAKYPKFKRSSSDVGDDGASSAILLLA 60

Query: 61 CIAFAPNFSSIA 71
          CIAF+P  S ++
Sbjct: 61 CIAFSPASSPVS 72

BLAST of Cla97C03G054640 vs. NCBI nr
Match: GFZ03822.1 (hypothetical protein Acr_16g0004460 [Actinidia rufa])

HSP 1 Score: 79.3 bits (194), Expect = 1.4e-11
Identity = 44/65 (67.69%), Postives = 52/65 (80.00%), Query Frame = 0

Query: 1  MVSKVEETLRRKHQQVQPPQAAATAKQIQCNKAKYPKFKRSSSDVEEDGASSAMLLLACI 60
          MVSKVEE ++++ QQ Q  Q     KQ+QCNK K  KFKRSSS++EEDGASSA+LLLACI
Sbjct: 1  MVSKVEEAMKKRQQQEQHQQ----QKQMQCNKGKASKFKRSSSNLEEDGASSAILLLACI 60

Query: 61 AFAPN 66
          AFAPN
Sbjct: 61 AFAPN 61

BLAST of Cla97C03G054640 vs. NCBI nr
Match: KAG2676094.1 (hypothetical protein I3760_12G035800 [Carya illinoinensis] >KAG6633270.1 hypothetical protein CIPAW_12G036300 [Carya illinoinensis] >KAG6683880.1 hypothetical protein I3842_12G034800 [Carya illinoinensis] >KAG7951991.1 hypothetical protein I3843_12G035700 [Carya illinoinensis])

HSP 1 Score: 76.6 bits (187), Expect = 9.4e-11
Identity = 43/68 (63.24%), Postives = 53/68 (77.94%), Query Frame = 0

Query: 1  MVSKVEETLRRKHQQ-VQPPQAAATAKQIQCNKAKYPKFKRSSSDVEEDGASSAMLLLAC 60
          MVSKVEE+++ K QQ  QP       KQ+QCNK K  KFKRSSS++EEDGASSA+LLLAC
Sbjct: 1  MVSKVEESMKGKQQQPQQPSHQQQLQKQMQCNKGKASKFKRSSSNLEEDGASSAILLLAC 60

Query: 61 IAFAPNFS 68
          IA AP+++
Sbjct: 61 IACAPSYA 68

BLAST of Cla97C03G054640 vs. ExPASy TrEMBL
Match: A0A0A0LTS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050230 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.1e-20
Identity = 60/70 (85.71%), Postives = 62/70 (88.57%), Query Frame = 0

Query: 1  MVSKVEETLRRKHQQVQPPQ-------AAATAKQIQCNKAKYPKFKRSSSDVEEDGASSA 60
          MVSKVEETLRRK+QQV PPQ       AAATAKQIQCNKAKYPKFKRSSS+VEEDGASSA
Sbjct: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA 60

Query: 61 MLLLACIAFA 64
          MLLLACIAFA
Sbjct: 61 MLLLACIAFA 70

BLAST of Cla97C03G054640 vs. ExPASy TrEMBL
Match: A0A7J0FYN8 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_16g0004460 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 7.0e-12
Identity = 44/65 (67.69%), Postives = 52/65 (80.00%), Query Frame = 0

Query: 1  MVSKVEETLRRKHQQVQPPQAAATAKQIQCNKAKYPKFKRSSSDVEEDGASSAMLLLACI 60
          MVSKVEE ++++ QQ Q  Q     KQ+QCNK K  KFKRSSS++EEDGASSA+LLLACI
Sbjct: 1  MVSKVEEAMKKRQQQEQHQQ----QKQMQCNKGKASKFKRSSSNLEEDGASSAILLLACI 60

Query: 61 AFAPN 66
          AFAPN
Sbjct: 61 AFAPN 61

BLAST of Cla97C03G054640 vs. ExPASy TrEMBL
Match: A0A4D6KYW9 (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g1293 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.0e-10
Identity = 44/69 (63.77%), Postives = 51/69 (73.91%), Query Frame = 0

Query: 1  MVSKVEETLRRKHQQVQ--PPQAAATAKQIQCNKAKYPKFKRSSSDVEEDGASSAMLLLA 60
          MVSKVEE ++RK Q  Q    Q     KQIQCNK K  KFKRSSS++EEDGASSA+L LA
Sbjct: 1  MVSKVEEAMKRKKQMQQEGQNQQQQVQKQIQCNKGKAGKFKRSSSNLEEDGASSAILFLA 60

Query: 61 CIAFAPNFS 68
          CIA AP+F+
Sbjct: 61 CIACAPSFA 69

BLAST of Cla97C03G054640 vs. ExPASy TrEMBL
Match: I1K083 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_05G045400 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.3e-10
Identity = 43/70 (61.43%), Postives = 55/70 (78.57%), Query Frame = 0

Query: 1  MVSKVEETLRRKHQQVQPP---QAAATAKQIQCNKAKYPKFKRSSSDVEEDGASSAMLLL 60
          MVSKVEE ++R ++Q+QP    Q     KQIQCNK K  KFKRSSS++EEDGASSA+L L
Sbjct: 1  MVSKVEEAMKR-NKQMQPQAQNQQQQLQKQIQCNKGKAGKFKRSSSNLEEDGASSAILFL 60

Query: 61 ACIAFAPNFS 68
          ACIA+AP+++
Sbjct: 61 ACIAYAPSYA 69

BLAST of Cla97C03G054640 vs. ExPASy TrEMBL
Match: A0A445KJ74 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_011276 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.3e-10
Identity = 43/70 (61.43%), Postives = 55/70 (78.57%), Query Frame = 0

Query: 1  MVSKVEETLRRKHQQVQPP---QAAATAKQIQCNKAKYPKFKRSSSDVEEDGASSAMLLL 60
          MVSKVEE ++R ++Q+QP    Q     KQIQCNK K  KFKRSSS++EEDGASSA+L L
Sbjct: 1  MVSKVEEAMKR-NKQMQPQAQNQQQQLQKQIQCNKGKAGKFKRSSSNLEEDGASSAILFL 60

Query: 61 ACIAFAPNFS 68
          ACIA+AP+++
Sbjct: 61 ACIAYAPSYA 69

BLAST of Cla97C03G054640 vs. TAIR 10
Match: AT5G50335.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 41.2 bits (95), Expect = 4.1e-04
Identity = 26/66 (39.39%), Postives = 39/66 (59.09%), Query Frame = 0

Query: 1  MVSKVEETLR-----RKHQQVQPPQAAATAKQIQCNKAKYPKFKRSSSDVEEDGASSAML 60
          MV + EE ++     ++ ++    Q         CNK K  +FKRS+S+++ DGASSA+ 
Sbjct: 1  MVCRAEEAMKQRGIIKRCKEDDRHQKKKMQSITNCNKEKSCRFKRSTSNLDNDGASSAIF 60

Query: 61 LLACIA 62
          LLACIA
Sbjct: 61 LLACIA 66

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6584135.11.4e-2287.50hypothetical protein SDJN03_20067, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN64384.18.5e-2085.71hypothetical protein Csa_013100 [Cucumis sativus][more]
KAG7012298.11.9e-1676.39hypothetical protein SDJN02_25050, partial [Cucurbita argyrosperma subsp. argyro... [more]
GFZ03822.11.4e-1167.69hypothetical protein Acr_16g0004460 [Actinidia rufa][more]
KAG2676094.19.4e-1163.24hypothetical protein I3760_12G035800 [Carya illinoinensis] >KAG6633270.1 hypothe... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LTS04.1e-2085.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050230 PE=4 SV=1[more]
A0A7J0FYN87.0e-1267.69Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_16g0004460 PE=4 SV=1[more]
A0A4D6KYW91.0e-1063.77Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g1293 PE=4 SV=1[more]
I1K0831.3e-1061.43Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_05G045400 PE=4 SV=1[more]
A0A445KJ741.3e-1061.43Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_011276 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G50335.14.1e-0439.39unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePANTHERPTHR38398EXPRESSED PROTEINcoord: 1..65

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C03G054640.1Cla97C03G054640.1mRNA