Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGCAAATAAATATGCCATGGATGTAGGATTTACTCCAGTAACCAACAAATGCAGGTTAAGAAACACTGACATACAACCTAAATCTCCAATGGAGTCTTCTACTCCACCACTGAGGCCTTCTACTTCTTTAATATGTCCTTCTGATGGACTTGTTCAATGAAGGCCTACTGCCTCTGCTTCCACAAATCAGGGATCATCAATCCCTTATCCTTCAATTTTTTCTCAAGCAATTGCACCTGAAAAGAAATTTCTGCCTCGACCTGAAATTAAGACCTATTTTCACAGGTTAGAGCTGAACTTGAACCTGAATTCCAAGGTCTCAACCTATAGAGACAATTTTAAAAATGTTTCCTAAAGGCTTCAATTTCATTCCTGAAGACCTCAAGAAAACTAGAACTTTTTATGACTTCATTCTCGTAGACACCCAAGTCTGCTAAGTTAACTTATATTCTAAACAAAAAAGATTCCTCTAGGATTGCTTACTCTAAATTCAAAATCTTCAAAGCGTTGAATCCAACCCATTGGAATCAAGGTATTTATATAGAAAAATCATTTTCAAAACCCTTCATACCTCAAACTTTTTCATACCAAGACTACATAAGGGCTTGGTATAATATTATGTGGTACTAAAATTATAACCATTCATGGTTTATTTCATTTTGCCCAAATGCATATAAAATTAATTTTCCATTATGGTTCATTCAATGGTGGAATATGTTCGGAATAACGGACTATATTCTACCAACTTCACTACAAGAGACATGCTTCTACTTTGCAAGAACAATCCAAAATATCTCATTCTATAATTCAATGAGATTTTGCCTTTATTTTCAAATCCCATGGATATTTTGCTGGAATTTTTTTACCAGCTCATTTCATCAATACAAGCCGGTCGTAAAGACTTTGAAGATAAAATGGTGGGACAAATATAACAAAAGTCAAAGAATGGTTTGCAGACAACGGCGATCTTGAGATGTACATTAAGAAAAACCCCGAGTTCCTAAATGACAAGTCCCAATTATTAGTAGCTTTGGCACAAACAACATCCGAAGCTGACTTTCAGAAGATCATAACCCCCGTGGCTTCAAGTTCATCATTGAGCGCATCTCCTCCTCCTTCAATCGAAGATGAAACTAAAGAAGAACCAGAGTGCGATCTCGACAATCCATACCTCGACTCACGACGTATGTGAGCTCCGAATCCATAAAATTACCTGTTTCGCATAATAACAAATGGTGTTCATAAGGGATGCTTCACAAAGAAGTAAATTCATCATCATCATCATCATCATCATCATCATCATCGCCATCATCATCATGTCAAATAAAAAATGTGTCCATGTATATTCTCATCTCTAGTTATAATTTTATGTGTAAACTTTGTAAATTTTATCATTTACATTGTAAATACATTTCTTGCCGTCACAAAAATCAGAAGAAAATATTTTGAAGCAACAACAACTAATATGAAGAAGTCCAAAGTTTGAAGACAACGATTATTGTTTTGTCGTGGCGTATAGTGTCACACCCCCTCCGGAATTTCCTCCTAACCCGGAAGTGAGTGTGAAATAA
mRNA sequence
ATGAGTGCAAATAAATATGCCATGGATGTAGGATTTACTCCAGTAACCAACAAATGCAGGTTAAGAAACACTGACATACAACCTAAATCTCCAATGGAGCCTACTGCCTCTGCTTCCACAAATCAGGGATCATCAATCCCTTATCCTTCAATTTTTTCTCAAGCAATTGCACCTGAAAAGAAATTTCTGCCTCGACCTGAAATTAAGACCTATTTTCACAGGTTAGAGCTGAACTTGAACCTGAATTCCAAGACACCCAAGTCTGCTAAGTTAACTTATATTCTAAACAAAAAAGATTCCTCTAGGATTGCTTACTCTAAATTCAAAATCTTCAAAGCGTTGAATCCAACCCATTGGAATCAAGACAACGGCGATCTTGAGATGTACATTAAGAAAAACCCCGAGTTCCTAAATGACAAGTCCCAATTATTAGTAGCTTTGGCACAAACAACATCCGAAGCTGACTTTCAGAAGATCATAACCCCCGTGGCTTCAAGTTCATCATTGAGCGCATCTCCTCCTCCTTCAATCGAAGATGAAACTAAAGAAGAACCAGAGTGCGATCTCGACAATCCATACCTCGACTCACGACGGATGCTTCACAAAGAAGTAAATTCATCATCATCATCATCATCATCATCATCATCATCGCCATCATCATCATGTCAAATAAAAAATGTGTCCATTGTCACACCCCCTCCGGAATTTCCTCCTAACCCGGAAGTGAGTGTGAAATAA
Coding sequence (CDS)
ATGAGTGCAAATAAATATGCCATGGATGTAGGATTTACTCCAGTAACCAACAAATGCAGGTTAAGAAACACTGACATACAACCTAAATCTCCAATGGAGCCTACTGCCTCTGCTTCCACAAATCAGGGATCATCAATCCCTTATCCTTCAATTTTTTCTCAAGCAATTGCACCTGAAAAGAAATTTCTGCCTCGACCTGAAATTAAGACCTATTTTCACAGGTTAGAGCTGAACTTGAACCTGAATTCCAAGACACCCAAGTCTGCTAAGTTAACTTATATTCTAAACAAAAAAGATTCCTCTAGGATTGCTTACTCTAAATTCAAAATCTTCAAAGCGTTGAATCCAACCCATTGGAATCAAGACAACGGCGATCTTGAGATGTACATTAAGAAAAACCCCGAGTTCCTAAATGACAAGTCCCAATTATTAGTAGCTTTGGCACAAACAACATCCGAAGCTGACTTTCAGAAGATCATAACCCCCGTGGCTTCAAGTTCATCATTGAGCGCATCTCCTCCTCCTTCAATCGAAGATGAAACTAAAGAAGAACCAGAGTGCGATCTCGACAATCCATACCTCGACTCACGACGGATGCTTCACAAAGAAGTAAATTCATCATCATCATCATCATCATCATCATCATCATCGCCATCATCATCATGTCAAATAAAAAATGTGTCCATTGTCACACCCCCTCCGGAATTTCCTCCTAACCCGGAAGTGAGTGTGAAATAA
Protein sequence
MSANKYAMDVGFTPVTNKCRLRNTDIQPKSPMEPTASASTNQGSSIPYPSIFSQAIAPEKKFLPRPEIKTYFHRLELNLNLNSKTPKSAKLTYILNKKDSSRIAYSKFKIFKALNPTHWNQDNGDLEMYIKKNPEFLNDKSQLLVALAQTTSEADFQKIITPVASSSSLSASPPPSIEDETKEEPECDLDNPYLDSRRMLHKEVNSSSSSSSSSSSSPSSSCQIKNVSIVTPPPEFPPNPEVSVK
Homology
BLAST of ClCG11G009680 vs. NCBI nr
Match:
TYJ98361.1 (hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa])
HSP 1 Score: 87.8 bits (216), Expect = 1.4e-13
Identity = 74/222 (33.33%), Postives = 115/222 (51.80%), Query Frame = 0
Query: 1 MSANKYAMDVGFTPVTNKCRLRNTDIQPKSPME----------------------PTASA 60
MS ++YAMD+G+T V + R +++ I +SPME +AS
Sbjct: 33 MSVDQYAMDLGYTTVI-QSRSKSSGIWIRSPMESSTPPRPSVNLIHPFGEVIQMRSSASP 92
Query: 61 STNQGSSIPYPSIFSQAIAPEKKFLPRPEIKTYFHRLELNLNLNSKTPKSAKLTYILNKK 120
S+N+ SS P+ +SQA+ P+K+F+PR EIK+YF +
Sbjct: 93 SSNRESS-TLPTTYSQAVTPDKQFVPRIEIKSYFQK------------------------ 152
Query: 121 DSSRIAYSKFKIFKALNPTHWNQDNGDL-EMYIKKNPEFLNDKSQLLVALAQTTSEADFQ 180
I+ + + Q NGDL ++ +KN +FLNDK + L AL Q T +ADFQ
Sbjct: 153 --------PIVIYDPIIELEY-QKNGDLQDIDQRKNAKFLNDKLKFLAALVQATIDADFQ 212
Query: 181 KIITPVASSSSLSASPPPSI--EDETKEEPECDLDNPYLDSR 198
++++ ++SS S+ P PS EDE + + E DLD+P+LDS+
Sbjct: 213 RLLSTAVNTSS-SSKPAPSFIQEDEEQVDLEYDLDDPFLDSQ 218
BLAST of ClCG11G009680 vs. NCBI nr
Match:
KAA0034823.1 (hypothetical protein E6C27_scaffold213G00570 [Cucumis melo var. makuwa])
HSP 1 Score: 65.5 bits (158), Expect = 7.5e-07
Identity = 47/103 (45.63%), Postives = 67/103 (65.05%), Query Frame = 0
Query: 107 KFKIFKALNPTH--------WNQDNGDL-EMYIKKNPEFLNDKSQLLVALAQTTSEADFQ 166
K K+++ N H W +N L ++ +KN EFLNDKS+LLVALAQ T++ADFQ
Sbjct: 7 KIKLWEKYNFQHATIKHIKEWFAENKYLQDIDQRKNVEFLNDKSKLLVALAQATTDADFQ 66
Query: 167 KIITPVASSSSLSASPPPSI-EDETKEEPECDLDNPYLDSRRM 200
++++ ++SS S SP SI EDE + +PE DLD+ LDS+ M
Sbjct: 67 RLLSTAVNASSSSKSPSSSIQEDEEQIDPEYDLDD--LDSQPM 107
BLAST of ClCG11G009680 vs. NCBI nr
Match:
KAA0066421.1 (hypothetical protein E6C27_scaffold21G005030 [Cucumis melo var. makuwa] >TYK00863.1 hypothetical protein E5676_scaffold602G00180 [Cucumis melo var. makuwa])
HSP 1 Score: 63.5 bits (153), Expect = 2.8e-06
Identity = 39/96 (40.62%), Postives = 57/96 (59.38%), Query Frame = 0
Query: 1 MSANKYAMDVGFTPVTNKCRLRNTDIQPKS----------------------PMEPTASA 60
MSA++YAMD+GFT VT + R R++ I+ +S M P AS
Sbjct: 1 MSADQYAMDLGFTTVT-RSRSRSSSIRIESSTESSTPPRPSANLIRPFGGAVQMRPPASP 60
Query: 61 STNQGSSIPYPSIFSQAIAPEKKFLPRPEIKTYFHR 75
S+N+ SS P P+ +SQ + P+K+F+PRPEIK+YF +
Sbjct: 61 SSNRESSTP-PTTYSQTVTPDKRFVPRPEIKSYFQK 94
BLAST of ClCG11G009680 vs. NCBI nr
Match:
KAA0061978.1 (hypothetical protein E6C27_scaffold89G002780 [Cucumis melo var. makuwa])
HSP 1 Score: 63.2 bits (152), Expect = 3.7e-06
Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 0
Query: 1 MSANKYAMDVGFTPVTNKCRLRNTDIQPKSP-------------MEPTASASTNQGSSIP 60
M+AN+YAMD+GF V ++ R R+ P P M P S S+N+ SS P
Sbjct: 33 MNANQYAMDLGFATV-SRSRSRSKSSTPPRPSASLICPSCRVVQMRPHVSPSSNKESSTP 92
Query: 61 YPSIFSQAIAPEKKFLPRPEIKTYFHR 75
P+ +SQ + PEK F+P+P+IK+YF +
Sbjct: 93 SPTTYSQVVTPEKWFVPKPKIKSYFQK 118
BLAST of ClCG11G009680 vs. NCBI nr
Match:
TYK23951.1 (hypothetical protein E5676_scaffold250G00070 [Cucumis melo var. makuwa])
HSP 1 Score: 63.2 bits (152), Expect = 3.7e-06
Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 0
Query: 1 MSANKYAMDVGFTPVTNKCRLRNTDIQPKSP-------------MEPTASASTNQGSSIP 60
M+AN+YAMD+GF V ++ R R+ P P M P S S+N+ SS P
Sbjct: 33 MNANQYAMDLGFATV-SRSRSRSKSSTPPRPSASLICPSCRVVQMRPHVSPSSNKESSTP 92
Query: 61 YPSIFSQAIAPEKKFLPRPEIKTYFHR 75
P+ +SQ + PEK F+P+P+IK+YF +
Sbjct: 93 SPTTYSQVVTPEKWFVPKPKIKSYFQK 118
BLAST of ClCG11G009680 vs. ExPASy TrEMBL
Match:
A0A5D3BI61 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00950 PE=4 SV=1)
HSP 1 Score: 87.8 bits (216), Expect = 6.8e-14
Identity = 74/222 (33.33%), Postives = 115/222 (51.80%), Query Frame = 0
Query: 1 MSANKYAMDVGFTPVTNKCRLRNTDIQPKSPME----------------------PTASA 60
MS ++YAMD+G+T V + R +++ I +SPME +AS
Sbjct: 33 MSVDQYAMDLGYTTVI-QSRSKSSGIWIRSPMESSTPPRPSVNLIHPFGEVIQMRSSASP 92
Query: 61 STNQGSSIPYPSIFSQAIAPEKKFLPRPEIKTYFHRLELNLNLNSKTPKSAKLTYILNKK 120
S+N+ SS P+ +SQA+ P+K+F+PR EIK+YF +
Sbjct: 93 SSNRESS-TLPTTYSQAVTPDKQFVPRIEIKSYFQK------------------------ 152
Query: 121 DSSRIAYSKFKIFKALNPTHWNQDNGDL-EMYIKKNPEFLNDKSQLLVALAQTTSEADFQ 180
I+ + + Q NGDL ++ +KN +FLNDK + L AL Q T +ADFQ
Sbjct: 153 --------PIVIYDPIIELEY-QKNGDLQDIDQRKNAKFLNDKLKFLAALVQATIDADFQ 212
Query: 181 KIITPVASSSSLSASPPPSI--EDETKEEPECDLDNPYLDSR 198
++++ ++SS S+ P PS EDE + + E DLD+P+LDS+
Sbjct: 213 RLLSTAVNTSS-SSKPAPSFIQEDEEQVDLEYDLDDPFLDSQ 218
BLAST of ClCG11G009680 vs. ExPASy TrEMBL
Match:
A0A5A7SWC0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold213G00570 PE=4 SV=1)
HSP 1 Score: 65.5 bits (158), Expect = 3.6e-07
Identity = 47/103 (45.63%), Postives = 67/103 (65.05%), Query Frame = 0
Query: 107 KFKIFKALNPTH--------WNQDNGDL-EMYIKKNPEFLNDKSQLLVALAQTTSEADFQ 166
K K+++ N H W +N L ++ +KN EFLNDKS+LLVALAQ T++ADFQ
Sbjct: 7 KIKLWEKYNFQHATIKHIKEWFAENKYLQDIDQRKNVEFLNDKSKLLVALAQATTDADFQ 66
Query: 167 KIITPVASSSSLSASPPPSI-EDETKEEPECDLDNPYLDSRRM 200
++++ ++SS S SP SI EDE + +PE DLD+ LDS+ M
Sbjct: 67 RLLSTAVNASSSSKSPSSSIQEDEEQIDPEYDLDD--LDSQPM 107
BLAST of ClCG11G009680 vs. ExPASy TrEMBL
Match:
A0A5D3BM67 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00180 PE=4 SV=1)
HSP 1 Score: 63.5 bits (153), Expect = 1.4e-06
Identity = 39/96 (40.62%), Postives = 57/96 (59.38%), Query Frame = 0
Query: 1 MSANKYAMDVGFTPVTNKCRLRNTDIQPKS----------------------PMEPTASA 60
MSA++YAMD+GFT VT + R R++ I+ +S M P AS
Sbjct: 1 MSADQYAMDLGFTTVT-RSRSRSSSIRIESSTESSTPPRPSANLIRPFGGAVQMRPPASP 60
Query: 61 STNQGSSIPYPSIFSQAIAPEKKFLPRPEIKTYFHR 75
S+N+ SS P P+ +SQ + P+K+F+PRPEIK+YF +
Sbjct: 61 SSNRESSTP-PTTYSQTVTPDKRFVPRPEIKSYFQK 94
BLAST of ClCG11G009680 vs. ExPASy TrEMBL
Match:
A0A5D3DJV6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00070 PE=4 SV=1)
HSP 1 Score: 63.2 bits (152), Expect = 1.8e-06
Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 0
Query: 1 MSANKYAMDVGFTPVTNKCRLRNTDIQPKSP-------------MEPTASASTNQGSSIP 60
M+AN+YAMD+GF V ++ R R+ P P M P S S+N+ SS P
Sbjct: 33 MNANQYAMDLGFATV-SRSRSRSKSSTPPRPSASLICPSCRVVQMRPHVSPSSNKESSTP 92
Query: 61 YPSIFSQAIAPEKKFLPRPEIKTYFHR 75
P+ +SQ + PEK F+P+P+IK+YF +
Sbjct: 93 SPTTYSQVVTPEKWFVPKPKIKSYFQK 118
BLAST of ClCG11G009680 vs. ExPASy TrEMBL
Match:
A0A5D3CKX1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00620 PE=4 SV=1)
HSP 1 Score: 63.2 bits (152), Expect = 1.8e-06
Identity = 38/96 (39.58%), Postives = 57/96 (59.38%), Query Frame = 0
Query: 1 MSANKYAMDVGFTPVTNKCRLRNTDIQPKSP----------------------MEPTASA 60
MSA++Y MD+GFT V + R R++ I+ +SP M P AS
Sbjct: 33 MSADQYEMDLGFTTVI-RSRSRSSSIRTESPTESSTPPRPLANLIRPSGRVVQMRPPASP 92
Query: 61 STNQGSSIPYPSIFSQAIAPEKKFLPRPEIKTYFHR 75
S+N+ SS P P+ +SQA+ P+K+F+PRP+IK+YF +
Sbjct: 93 SSNRESSTP-PTTYSQAVTPDKRFVPRPKIKSYFQK 126
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| TYJ98361.1 | 1.4e-13 | 33.33 | hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa] | [more] |
| KAA0034823.1 | 7.5e-07 | 45.63 | hypothetical protein E6C27_scaffold213G00570 [Cucumis melo var. makuwa] | [more] |
| KAA0066421.1 | 2.8e-06 | 40.63 | hypothetical protein E6C27_scaffold21G005030 [Cucumis melo var. makuwa] >TYK0086... | [more] |
| KAA0061978.1 | 3.7e-06 | 40.23 | hypothetical protein E6C27_scaffold89G002780 [Cucumis melo var. makuwa] | [more] |
| TYK23951.1 | 3.7e-06 | 40.23 | hypothetical protein E5676_scaffold250G00070 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3BI61 | 6.8e-14 | 33.33 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7SWC0 | 3.6e-07 | 45.63 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5D3BM67 | 1.4e-06 | 40.63 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3DJV6 | 1.8e-06 | 40.23 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3CKX1 | 1.8e-06 | 39.58 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
