ClCG11G009680 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG11G009680
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Unknown protein
Location	CG_Chr11: 15627728 .. 15629303 (+)
RNA-Seq Expression	ClCG11G009680
Synteny	ClCG11G009680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGCAAATAAATATGCCATGGATGTAGGATTTACTCCAGTAACCAACAAATGCAGGTTAAGAAACACTGACATACAACCTAAATCTCCAATGGAGTCTTCTACTCCACCACTGAGGCCTTCTACTTCTTTAATATGTCCTTCTGATGGACTTGTTCAATGAAGGCCTACTGCCTCTGCTTCCACAAATCAGGGATCATCAATCCCTTATCCTTCAATTTTTTCTCAAGCAATTGCACCTGAAAAGAAATTTCTGCCTCGACCTGAAATTAAGACCTATTTTCACAGGTTAGAGCTGAACTTGAACCTGAATTCCAAGGTCTCAACCTATAGAGACAATTTTAAAAATGTTTCCTAAAGGCTTCAATTTCATTCCTGAAGACCTCAAGAAAACTAGAACTTTTTATGACTTCATTCTCGTAGACACCCAAGTCTGCTAAGTTAACTTATATTCTAAACAAAAAAGATTCCTCTAGGATTGCTTACTCTAAATTCAAAATCTTCAAAGCGTTGAATCCAACCCATTGGAATCAAGGTATTTATATAGAAAAATCATTTTCAAAACCCTTCATACCTCAAACTTTTTCATACCAAGACTACATAAGGGCTTGGTATAATATTATGTGGTACTAAAATTATAACCATTCATGGTTTATTTCATTTTGCCCAAATGCATATAAAATTAATTTTCCATTATGGTTCATTCAATGGTGGAATATGTTCGGAATAACGGACTATATTCTACCAACTTCACTACAAGAGACATGCTTCTACTTTGCAAGAACAATCCAAAATATCTCATTCTATAATTCAATGAGATTTTGCCTTTATTTTCAAATCCCATGGATATTTTGCTGGAATTTTTTTACCAGCTCATTTCATCAATACAAGCCGGTCGTAAAGACTTTGAAGATAAAATGGTGGGACAAATATAACAAAAGTCAAAGAATGGTTTGCAGACAACGGCGATCTTGAGATGTACATTAAGAAAAACCCCGAGTTCCTAAATGACAAGTCCCAATTATTAGTAGCTTTGGCACAAACAACATCCGAAGCTGACTTTCAGAAGATCATAACCCCCGTGGCTTCAAGTTCATCATTGAGCGCATCTCCTCCTCCTTCAATCGAAGATGAAACTAAAGAAGAACCAGAGTGCGATCTCGACAATCCATACCTCGACTCACGACGTATGTGAGCTCCGAATCCATAAAATTACCTGTTTCGCATAATAACAAATGGTGTTCATAAGGGATGCTTCACAAAGAAGTAAATTCATCATCATCATCATCATCATCATCATCATCATCGCCATCATCATCATGTCAAATAAAAAATGTGTCCATGTATATTCTCATCTCTAGTTATAATTTTATGTGTAAACTTTGTAAATTTTATCATTTACATTGTAAATACATTTCTTGCCGTCACAAAAATCAGAAGAAAATATTTTGAAGCAACAACAACTAATATGAAGAAGTCCAAAGTTTGAAGACAACGATTATTGTTTTGTCGTGGCGTATAGTGTCACACCCCCTCCGGAATTTCCTCCTAACCCGGAAGTGAGTGTGAAATAA

mRNA sequence

ATGAGTGCAAATAAATATGCCATGGATGTAGGATTTACTCCAGTAACCAACAAATGCAGGTTAAGAAACACTGACATACAACCTAAATCTCCAATGGAGCCTACTGCCTCTGCTTCCACAAATCAGGGATCATCAATCCCTTATCCTTCAATTTTTTCTCAAGCAATTGCACCTGAAAAGAAATTTCTGCCTCGACCTGAAATTAAGACCTATTTTCACAGGTTAGAGCTGAACTTGAACCTGAATTCCAAGACACCCAAGTCTGCTAAGTTAACTTATATTCTAAACAAAAAAGATTCCTCTAGGATTGCTTACTCTAAATTCAAAATCTTCAAAGCGTTGAATCCAACCCATTGGAATCAAGACAACGGCGATCTTGAGATGTACATTAAGAAAAACCCCGAGTTCCTAAATGACAAGTCCCAATTATTAGTAGCTTTGGCACAAACAACATCCGAAGCTGACTTTCAGAAGATCATAACCCCCGTGGCTTCAAGTTCATCATTGAGCGCATCTCCTCCTCCTTCAATCGAAGATGAAACTAAAGAAGAACCAGAGTGCGATCTCGACAATCCATACCTCGACTCACGACGGATGCTTCACAAAGAAGTAAATTCATCATCATCATCATCATCATCATCATCATCATCGCCATCATCATCATGTCAAATAAAAAATGTGTCCATTGTCACACCCCCTCCGGAATTTCCTCCTAACCCGGAAGTGAGTGTGAAATAA

Coding sequence (CDS)

ATGAGTGCAAATAAATATGCCATGGATGTAGGATTTACTCCAGTAACCAACAAATGCAGGTTAAGAAACACTGACATACAACCTAAATCTCCAATGGAGCCTACTGCCTCTGCTTCCACAAATCAGGGATCATCAATCCCTTATCCTTCAATTTTTTCTCAAGCAATTGCACCTGAAAAGAAATTTCTGCCTCGACCTGAAATTAAGACCTATTTTCACAGGTTAGAGCTGAACTTGAACCTGAATTCCAAGACACCCAAGTCTGCTAAGTTAACTTATATTCTAAACAAAAAAGATTCCTCTAGGATTGCTTACTCTAAATTCAAAATCTTCAAAGCGTTGAATCCAACCCATTGGAATCAAGACAACGGCGATCTTGAGATGTACATTAAGAAAAACCCCGAGTTCCTAAATGACAAGTCCCAATTATTAGTAGCTTTGGCACAAACAACATCCGAAGCTGACTTTCAGAAGATCATAACCCCCGTGGCTTCAAGTTCATCATTGAGCGCATCTCCTCCTCCTTCAATCGAAGATGAAACTAAAGAAGAACCAGAGTGCGATCTCGACAATCCATACCTCGACTCACGACGGATGCTTCACAAAGAAGTAAATTCATCATCATCATCATCATCATCATCATCATCATCGCCATCATCATCATGTCAAATAAAAAATGTGTCCATTGTCACACCCCCTCCGGAATTTCCTCCTAACCCGGAAGTGAGTGTGAAATAA

Protein sequence

MSANKYAMDVGFTPVTNKCRLRNTDIQPKSPMEPTASASTNQGSSIPYPSIFSQAIAPEKKFLPRPEIKTYFHRLELNLNLNSKTPKSAKLTYILNKKDSSRIAYSKFKIFKALNPTHWNQDNGDLEMYIKKNPEFLNDKSQLLVALAQTTSEADFQKIITPVASSSSLSASPPPSIEDETKEEPECDLDNPYLDSRRMLHKEVNSSSSSSSSSSSSPSSSCQIKNVSIVTPPPEFPPNPEVSVK

Homology

[Close]

BLAST of ClCG11G009680 vs. NCBI nr
Match: TYJ98361.1 (hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa])

HSP 1 Score: 87.8 bits (216), Expect = 1.4e-13
Identity = 74/222 (33.33%), Postives = 115/222 (51.80%), Query Frame = 0


Query: 1   MSANKYAMDVGFTPVTNKCRLRNTDIQPKSPME----------------------PTASA 60
           MS ++YAMD+G+T V  + R +++ I  +SPME                       +AS 
Sbjct: 33  MSVDQYAMDLGYTTVI-QSRSKSSGIWIRSPMESSTPPRPSVNLIHPFGEVIQMRSSASP 92

Query: 61  STNQGSSIPYPSIFSQAIAPEKKFLPRPEIKTYFHRLELNLNLNSKTPKSAKLTYILNKK 120
           S+N+ SS   P+ +SQA+ P+K+F+PR EIK+YF +                        
Sbjct: 93  SSNRESS-TLPTTYSQAVTPDKQFVPRIEIKSYFQK------------------------ 152

Query: 121 DSSRIAYSKFKIFKALNPTHWNQDNGDL-EMYIKKNPEFLNDKSQLLVALAQTTSEADFQ 180
                      I+  +    + Q NGDL ++  +KN +FLNDK + L AL Q T +ADFQ
Sbjct: 153 --------PIVIYDPIIELEY-QKNGDLQDIDQRKNAKFLNDKLKFLAALVQATIDADFQ 212

Query: 181 KIITPVASSSSLSASPPPSI--EDETKEEPECDLDNPYLDSR 198
           ++++   ++SS S+ P PS   EDE + + E DLD+P+LDS+
Sbjct: 213 RLLSTAVNTSS-SSKPAPSFIQEDEEQVDLEYDLDDPFLDSQ 218

[Close]

BLAST of ClCG11G009680 vs. NCBI nr
Match: KAA0034823.1 (hypothetical protein E6C27_scaffold213G00570 [Cucumis melo var. makuwa])

HSP 1 Score: 65.5 bits (158), Expect = 7.5e-07
Identity = 47/103 (45.63%), Postives = 67/103 (65.05%), Query Frame = 0


Query: 107 KFKIFKALNPTH--------WNQDNGDL-EMYIKKNPEFLNDKSQLLVALAQTTSEADFQ 166
           K K+++  N  H        W  +N  L ++  +KN EFLNDKS+LLVALAQ T++ADFQ
Sbjct: 7   KIKLWEKYNFQHATIKHIKEWFAENKYLQDIDQRKNVEFLNDKSKLLVALAQATTDADFQ 66

Query: 167 KIITPVASSSSLSASPPPSI-EDETKEEPECDLDNPYLDSRRM 200
           ++++   ++SS S SP  SI EDE + +PE DLD+  LDS+ M
Sbjct: 67  RLLSTAVNASSSSKSPSSSIQEDEEQIDPEYDLDD--LDSQPM 107

[Close]

BLAST of ClCG11G009680 vs. NCBI nr
Match: KAA0066421.1 (hypothetical protein E6C27_scaffold21G005030 [Cucumis melo var. makuwa] >TYK00863.1 hypothetical protein E5676_scaffold602G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 63.5 bits (153), Expect = 2.8e-06
Identity = 39/96 (40.62%), Postives = 57/96 (59.38%), Query Frame = 0


Query: 1  MSANKYAMDVGFTPVTNKCRLRNTDIQPKS----------------------PMEPTASA 60
          MSA++YAMD+GFT VT + R R++ I+ +S                       M P AS 
Sbjct: 1  MSADQYAMDLGFTTVT-RSRSRSSSIRIESSTESSTPPRPSANLIRPFGGAVQMRPPASP 60

Query: 61 STNQGSSIPYPSIFSQAIAPEKKFLPRPEIKTYFHR 75
          S+N+ SS P P+ +SQ + P+K+F+PRPEIK+YF +
Sbjct: 61 SSNRESSTP-PTTYSQTVTPDKRFVPRPEIKSYFQK 94

[Close]

BLAST of ClCG11G009680 vs. NCBI nr
Match: KAA0061978.1 (hypothetical protein E6C27_scaffold89G002780 [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 3.7e-06
Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 1   MSANKYAMDVGFTPVTNKCRLRNTDIQPKSP-------------MEPTASASTNQGSSIP 60
           M+AN+YAMD+GF  V ++ R R+    P  P             M P  S S+N+ SS P
Sbjct: 33  MNANQYAMDLGFATV-SRSRSRSKSSTPPRPSASLICPSCRVVQMRPHVSPSSNKESSTP 92

Query: 61  YPSIFSQAIAPEKKFLPRPEIKTYFHR 75
            P+ +SQ + PEK F+P+P+IK+YF +
Sbjct: 93  SPTTYSQVVTPEKWFVPKPKIKSYFQK 118

[Close]

BLAST of ClCG11G009680 vs. NCBI nr
Match: TYK23951.1 (hypothetical protein E5676_scaffold250G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 3.7e-06
Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 1   MSANKYAMDVGFTPVTNKCRLRNTDIQPKSP-------------MEPTASASTNQGSSIP 60
           M+AN+YAMD+GF  V ++ R R+    P  P             M P  S S+N+ SS P
Sbjct: 33  MNANQYAMDLGFATV-SRSRSRSKSSTPPRPSASLICPSCRVVQMRPHVSPSSNKESSTP 92

Query: 61  YPSIFSQAIAPEKKFLPRPEIKTYFHR 75
            P+ +SQ + PEK F+P+P+IK+YF +
Sbjct: 93  SPTTYSQVVTPEKWFVPKPKIKSYFQK 118

[Close]

BLAST of ClCG11G009680 vs. ExPASy TrEMBL
Match: A0A5D3BI61 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00950 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 6.8e-14
Identity = 74/222 (33.33%), Postives = 115/222 (51.80%), Query Frame = 0


Query: 1   MSANKYAMDVGFTPVTNKCRLRNTDIQPKSPME----------------------PTASA 60
           MS ++YAMD+G+T V  + R +++ I  +SPME                       +AS 
Sbjct: 33  MSVDQYAMDLGYTTVI-QSRSKSSGIWIRSPMESSTPPRPSVNLIHPFGEVIQMRSSASP 92

Query: 61  STNQGSSIPYPSIFSQAIAPEKKFLPRPEIKTYFHRLELNLNLNSKTPKSAKLTYILNKK 120
           S+N+ SS   P+ +SQA+ P+K+F+PR EIK+YF +                        
Sbjct: 93  SSNRESS-TLPTTYSQAVTPDKQFVPRIEIKSYFQK------------------------ 152

Query: 121 DSSRIAYSKFKIFKALNPTHWNQDNGDL-EMYIKKNPEFLNDKSQLLVALAQTTSEADFQ 180
                      I+  +    + Q NGDL ++  +KN +FLNDK + L AL Q T +ADFQ
Sbjct: 153 --------PIVIYDPIIELEY-QKNGDLQDIDQRKNAKFLNDKLKFLAALVQATIDADFQ 212

Query: 181 KIITPVASSSSLSASPPPSI--EDETKEEPECDLDNPYLDSR 198
           ++++   ++SS S+ P PS   EDE + + E DLD+P+LDS+
Sbjct: 213 RLLSTAVNTSS-SSKPAPSFIQEDEEQVDLEYDLDDPFLDSQ 218

[Close]

BLAST of ClCG11G009680 vs. ExPASy TrEMBL
Match: A0A5A7SWC0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold213G00570 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 3.6e-07
Identity = 47/103 (45.63%), Postives = 67/103 (65.05%), Query Frame = 0


Query: 107 KFKIFKALNPTH--------WNQDNGDL-EMYIKKNPEFLNDKSQLLVALAQTTSEADFQ 166
           K K+++  N  H        W  +N  L ++  +KN EFLNDKS+LLVALAQ T++ADFQ
Sbjct: 7   KIKLWEKYNFQHATIKHIKEWFAENKYLQDIDQRKNVEFLNDKSKLLVALAQATTDADFQ 66

Query: 167 KIITPVASSSSLSASPPPSI-EDETKEEPECDLDNPYLDSRRM 200
           ++++   ++SS S SP  SI EDE + +PE DLD+  LDS+ M
Sbjct: 67  RLLSTAVNASSSSKSPSSSIQEDEEQIDPEYDLDD--LDSQPM 107

[Close]

BLAST of ClCG11G009680 vs. ExPASy TrEMBL
Match: A0A5D3BM67 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00180 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.4e-06
Identity = 39/96 (40.62%), Postives = 57/96 (59.38%), Query Frame = 0


Query: 1  MSANKYAMDVGFTPVTNKCRLRNTDIQPKS----------------------PMEPTASA 60
          MSA++YAMD+GFT VT + R R++ I+ +S                       M P AS 
Sbjct: 1  MSADQYAMDLGFTTVT-RSRSRSSSIRIESSTESSTPPRPSANLIRPFGGAVQMRPPASP 60

Query: 61 STNQGSSIPYPSIFSQAIAPEKKFLPRPEIKTYFHR 75
          S+N+ SS P P+ +SQ + P+K+F+PRPEIK+YF +
Sbjct: 61 SSNRESSTP-PTTYSQTVTPDKRFVPRPEIKSYFQK 94

[Close]

BLAST of ClCG11G009680 vs. ExPASy TrEMBL
Match: A0A5D3DJV6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00070 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.8e-06
Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 1   MSANKYAMDVGFTPVTNKCRLRNTDIQPKSP-------------MEPTASASTNQGSSIP 60
           M+AN+YAMD+GF  V ++ R R+    P  P             M P  S S+N+ SS P
Sbjct: 33  MNANQYAMDLGFATV-SRSRSRSKSSTPPRPSASLICPSCRVVQMRPHVSPSSNKESSTP 92

Query: 61  YPSIFSQAIAPEKKFLPRPEIKTYFHR 75
            P+ +SQ + PEK F+P+P+IK+YF +
Sbjct: 93  SPTTYSQVVTPEKWFVPKPKIKSYFQK 118

[Close]

BLAST of ClCG11G009680 vs. ExPASy TrEMBL
Match: A0A5D3CKX1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00620 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.8e-06
Identity = 38/96 (39.58%), Postives = 57/96 (59.38%), Query Frame = 0


Query: 1   MSANKYAMDVGFTPVTNKCRLRNTDIQPKSP----------------------MEPTASA 60
           MSA++Y MD+GFT V  + R R++ I+ +SP                      M P AS 
Sbjct: 33  MSADQYEMDLGFTTVI-RSRSRSSSIRTESPTESSTPPRPLANLIRPSGRVVQMRPPASP 92

Query: 61  STNQGSSIPYPSIFSQAIAPEKKFLPRPEIKTYFHR 75
           S+N+ SS P P+ +SQA+ P+K+F+PRP+IK+YF +
Sbjct: 93  SSNRESSTP-PTTYSQAVTPDKRFVPRPKIKSYFQK 126

The following BLAST results are available for this feature:

BLAST of ClCG11G009680 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ98361.1	1.4e-13	33.33	hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa]	[more]
KAA0034823.1	7.5e-07	45.63	hypothetical protein E6C27_scaffold213G00570 [Cucumis melo var. makuwa]	[more]
KAA0066421.1	2.8e-06	40.63	hypothetical protein E6C27_scaffold21G005030 [Cucumis melo var. makuwa] >TYK0086...	[more]
KAA0061978.1	3.7e-06	40.23	hypothetical protein E6C27_scaffold89G002780 [Cucumis melo var. makuwa]	[more]
TYK23951.1	3.7e-06	40.23	hypothetical protein E5676_scaffold250G00070 [Cucumis melo var. makuwa]	[more]

BLAST of ClCG11G009680 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG11G009680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BI61	6.8e-14	33.33	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SWC0	3.6e-07	45.63	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BM67	1.4e-06	40.63	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DJV6	1.8e-06	40.23	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CKX1	1.8e-06	39.58	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of ClCG11G009680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..44

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G009680.1	ClCG11G009680.1	mRNA