ClCG11G007340 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG11G007340
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	protein BTR1
Location	CG_Chr11: 8766091 .. 8780385 (+)
RNA-Seq Expression	ClCG11G007340
Synteny	ClCG11G007340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACCTGTTGTGGAGGAAATAATTTTGGTGTAAACGCAAAGGTAACGGAAGCTGATCATGCGTTGAAGTTGAGACGCGTTGAGGACATAAGACGTGGAGGATCATTATGCGTCAAACGCATTGAAGGCAATGTGCCGATTAGAAGTAAGGGCCACGAGGAGTTTGGGAGCTGGTCTGCGGTGAGGCTGTTGTGCGGCGAACACTACCATGCGTCGAAGGCTGGTATGCGTTAGACAAATGTTGGCTGAGAGAAGGTAATGTGTATGTTAACTATTTGGCGAGAGAGTTTGAAATGAAATATCAACCAGAGGCCGTGTGTGTTGCTGAAACTGAGCATAGGAGGTATGCGTTGAACGGACTATAGCATAGAATTGAAATGGAGTACAAGTCGGTGGTATATATATAAGTGGTCTGAGAATTCAATTGTTCTGCTTGCATTTCGAGTAGGGTCCATTTTAAGGCGAAACATTGAAGGGAAGTAGAAGAAGATGTTCATGTTGATCTGAAGCAAAAATATCATTGAATTCGTGGGAGAAACTTGGGTTTGACAGAGGTTTCAGCTACTGTGGTCTTTTCAGAGTGATGCTCGGTTTTGGAAGAAGAACAAATTGAAGAGACGAAGGTTAGGGCTGAAACTTTGAGGTTAGTAAGTTAACTCGATTTCTAGCAGGTTTCATGAAGAATGCTTGAGATGAAATTGTTTAATTGTGTGTCAAACTCAGGAAGAAGAGACGGGAGTTGAACTGTCGAATGAGTGGAGGTAACTCGGAGTTGTCGAAGGATATGTCCCAAACGGGGAAGATGTGCTTCATGAAATTTTTAGGTAAGATGAAGGACCTGTATTCTAACAAGTTTGTAGAAGGAAGAAAGTACTGAAATTGATTGAAACGAAATGTTTAGCAGGTTGAAGAAGGAAGAAGAAAGGAAGAAGGAAACGATTCTATCACAGCAAAAGTATCGCTGAGTAAGCGAGAGACTGAGCAGCAGAGAAAGTAACGCTGCAACGCAAAGATAGGCTTGCGTCTCACAACTCTCGCTAGAGTATCGCTGGGTATCGCTCCTCAAGGTAGTTTCGCTGGTTTTAATCAACGCAGTGTCGCTAGAACAGTTTGAATATCTTTCGAGTAACGCTGGTAGCTTACTAATTTCTATGGAGTAACGATGCTACTGAATGTTAAAAGAAAAAGGGAGATTATGGAAAACTAAACTTGAGGATTGTGTATTTTCAGGCCAAGAAGAGCTCGGGGAGGCTTATAACCCACTTAGAGCCGGGACCGATTGTGAGTGACTGTTTGTTATACCTTGTATTAAACTTAGTACGCATATTGATGAGGAAACGTGATTCATGGTAGTATGCCTTATGTATGTGATGTGTTAGTGATTTAAGAGAATATTATTACAAATGTCTAAACACATAAGTGGCTGAGGGACCTTATGGTGAAAGCTACATGTGAGTAAGTTTGAAATTAAGTGCTGAGGGATCTGAGAAGGCACTTGAATAACAGTAGAAAATGGACTACAATGCTCAGGGACTGTAAATGAAGGCATGTAGTAATCCATCTCACACTAGCTCGTGCCGAGGGATCATGAGTAAAGGCACTTGAGCATGGATAGAGTTTGTTACCTGTGCCGAGGGATTTCATGTGAAGGCACATGGTACAGAAATTATAAACGAATAAGTGCTGAGGGACGGGAAGTGAAAGCACTAAATAGATGAAAGCTTGTGAGACATGAGAGTTTGATAGTTATATATGCATAGTGTAAAAGTGAATCTTGACAGTTTATTGGGATGTGTTATGCGTTGGTTACTATCTTACAAACTGGATTTAAGTTGTCATGATTAGTTTTAGTAGATTTAGTCACTCACTGAGCCTTTTGCTCATCCAGTTTGTTGTTATTTGTTATTTCAGGTAGCGAGCGTGTCCGGGACGCCTAGCCTACTGAAGAATCTCGTCTGGACCTATCTGGAAGCGAACCTCTGGGATAGTTGTAAATATTTAGATTGTTCATATGTCATGTACAAAACATCTTTCATGAGAGTGTAGAGAAAGGGGGAGCGTGTGTACTTATTATGTGTATACAGACATGGTAATTAAAAGTTTACCCGTTCTTCTGTGATGAGATAATGGGATTGTTGTATGATTTGTTAATCTTTTATGGTGTTTACATTATAGAGTCTTGTGTTGGAAATAGGATCATGCTCCTTCCTAGGTATAGAGTAAATCTGGGATGGGGTGTGACAACTGTCCTCAACGCAGAATGGCTTTAGCGCATGGTTCAAGCACGTTTCTTTCCCCCGCCAGAATTACTTATCCTTCAACGCGGTTAGCTACTTCAGCTTACTAACCTCCGTGAATCAACCACAAACGCAAGGACTTAGTCAATACTTAGCCACAATTTTACTTCCCAAAATTTCTTACTCTCGCTCTCGGCCACTTCTTCCTTTGAAACACATAGTCACAAACGCATGGCTGCACCCCAACGCTTGGCAACGCAAATCAGTGCTTACAGCAACTCTCTCTAGTCGCTGTCGCTGCCACCATCTTCGTGAAGAAGGGAGGAGGAAGGAGAATGGAGTCCACTGAGTCTTCATACATCTCGTCCCTAGAGGCTCCTGCAAAGCAATCTCCTCCGCCGCCAAAATCTCCAAACTCGGGTATCTGATCTGATTTCAATTGCTTTTTTACTCTCATTTTCAACAATTTAATCTCTACTCTCACTGTTTTGTATGAATTTTTTTGTATGCTTGGTGTTGTTCTTGTATGCGAGTGTTTTTGTTTCAGATCGGTTTATATAAGGAATGATGCAATTGCGTGTTTCTTTTTTATTTTTGTTTTTGTTTGTTTTTACCTTCTTATTTTTCTCCTTTGTTTGGAATTTAAACCCTAGATTTACGTGTTTTGTTTGATTTATTTGTGACGGCAGAAGGAATTAGAAATCGTGCAATTTCGTTCTTGATAAGCACTTGAAAAGTGCTTTCTATTCTCTCAAATTAAGGGAGTTTATATTAGATTTCACTTGTTTGCTAGTGATTTTCAGGTGAAAACGAGGAAAATTAGAAGAAACGATTAAAAGATCAAAACCGAGCAAGAATATGGCGAAAAAGAGTTGAAAAACCAAAAAGGGCAAATTTTGGGGATAGCGCCGCGATGCCAAGACGGCGCTGCCGCGGCTGAAACATCAACGCATGGTTCTAGACGCAGAGTAGCATTGCGGCGCCAAGATGGCGCTGCCTCGACGCATCCTTGCTGAAACGCATTCTAGCGCTGCGACACTTAGACGACGCTGCCGCGACGCTAAAACCCGAGAGCAATATTTCTGAAACGCATTTTAGCGCTGCGACGCGTGGACGGCGCTGTCGTGGCGCTAAAACCCGAGAGCAAGCTTTTTCGGATGCAGCCCTAGCGCCGCGACGCCAGCTTTCTTTAATTGAAAAATCTGTATTTTTGAAAAATTTTGGGCGGCCAAACTCTATAAAATTTGGGGGTTTCTAGCAGTCCAATTCATCAAGAAAAATCAAGGCAAAGCAAGAAAGTTGCAGACCTAAAGAGATACAAAAAGGAGAGAATTAAGTGAGGGTTCAAAGAGTGAGTTAGTTGCAAGGAAGAGGAAAAGAGTTCGAGATAGTCTTGGTGCCCTTCGAAGTCCGACGTGAGAGCCAAGGAGATCGAAACGATGCTACTTCAATCAAGAGCCTCTTTTCAGTAGAGTTTCCCTTTCTTTACACTCTTTCTTTGTTTATTTTTCTTAAACATGTTGCTTCAAGCTATGAGTGGCTAAACTATTTAGTTTTAGGGTTTTGATGAATTGTTTATGAATTTATGTTAATTTTGTAGACTCATGGTTTTGTTGGAATGATTATGCTTTTCATTGTTATTGTGTTTAATGCTTGTGGATTGGCTATCTTCACATGTTAGGTTAGATGTATGATTGAGAGATTTTATGTTTAACTTGATCTATAACAATGAATTATTGTTAATCTATCACGAAAGTAGTTAGGTTGACAATAAAAGTTGTTAAAGACTATTTTTAATGCCATGTAATTTTGTGTTGGTTTTAAGAGATTAATAATCAATCAAGTTGCATGAGAAATGGTTGTTTTTGAGAGAAAATAACTTGGAATTAAGTTTCTAGACTTAAGCATATGAATTGCAATAAAATCCATGAAATCTATAATATTGCATGATGAAATAAACAAGGATTCATTACCCTAGAACTCTCTTTGACTCTTGTGTTTCTGACTTTGATACTTTCCTTATTTGATTTGTATTTTTGCATAACTCATAATATTCAATTTCAATCTTCAAATAAAATTGATTCAATTCTAAAATAGCTAAGTAACTTAAACCTTCCCAATTGGATCTCCAGTGGAACGATATTCGGACTTAACCGTTTTATATTATAACTTGACCCGTACACTTGCAGTTAACACTAAAAGTGTTCATCAGTTCTCCAATGACCTAGACTCCTGCTTCCTTGTCTTGAAATCTTAAATTACGAGAGCGTGGCTTCTGGTAGGGTATTTTTGTTTTTCATGTGGGGGCAGGGTTTGTCTATTGAGATTTATCCCAATTGACCGAATGAATTGGGAAACAGTCGTCATTTTCTTGAAGTGTCACTGCCACCGACTCATCCGTCTATTGACAAGAACCGCACTGTGTTTCCTGGTGTGTGTTGTACTAGTCAAAAGTTCGCTATCTTTGGTGATTGGACAGGGAGTAGAAAAATGAGCAGTCTCAAGTTTGTTCAAGCAGAGCATTCAAACTCTCTTTCGACCATTGATTCTTCTATAATTTTATCAAGGCAGCTGAATGTTGAGTGCTATTTGGTCGTAACAAACTTCTTTTCCCGTGTATTTCTCATTTTGGTTACTGAAATTGCCTCAATGAGTATATGTGGATCGATTTCTTCTAATAATGGATTGGATTGTAGATAAAACCCTTCCTCAATTCTTTTTCAACATTGACATTTATCATTTTTCTTTTTGTGAAAACGCAGTAAAGGGATTCATAAGTGGCATTTTTTATCTACAATCTACACTGGTAATATGTAGGTTTCTTTATGACATATGATTATGATTTATAACAAAGGCTTTAGTTCTGTCACATTTTCAACCTTCTAGATTATATTATGAATAAGAGATTCATGTACATTTCTAATTGATAGTGCATATGTGCCTGTACAATTTTGCGGTTAAATATTACGATTACTTCCATTCCTGCCTGTTAATATTGTCTTACTCATCAAAATTACTATTGTCAGATAATATGGAAAAGGCTACATACATAAGGTTTCTTGTATGAAATGCTGCGGCTGGTTCTGTAATTGGGACAGGTGGTTCAACAATTAATGATTTCCAGTCACAGTCTGGTGCACGAATCCAATTGTCACGGAACCATGAAGTTTTTCCTGGAACCACTGATAGGATCGTTATGGTATCTGGATCAATTAATGAAATACTGAAGGCCATAGAACTCGTTCTTGCTAAGTTGTTGAGTGAGGTAATGAAATACTGAAGGCCATAGAACTCGTTCTTGCTAAGTTGTTGAGTGAGGTAATCTCTTTGCAGTTCAAGTTCACCCTAGAAATTAAATGTTCTACTATTTGTGATTGATTAAAATTTTGTTTGCCCATAGCTTCATGCTGAAGAAGGAGCTGATGTTGAACCGAGAACAAAAGTGAGACTAATTGTTCCCCATAGTTCATGTGGAGCTATAATTGGCAAAGGAGGATCCACTATAAAGTATGATGTCTATATTTCATTCTCTTACCATTTTTTTGGTTACTAATTGCTTTTTAATTTATTAGCTTAAACAATTTATTGCCATTTTTAATTTGGTTAAATTACAAGTTGATTATTTCTACTAATAGGTTCCGAAAATTTTAAAAATATCTAATTGGTCCATAAACTTTTAATTATGAGTCTCACAAGTCCATAGATTTTCAATTTTGTGTCTTTAGGTTTGTGAATTTTAAAGAATGTCAAATAGATACTTGACCTATTGGACACAAAGTTGGAAGTTTAGGGTCCTATTAGATACAAAATTGAAAGTTTAAGGACCTATTAAAAACCAAGTTGAAATTGTGGGGCTTATTAAATACTTTTTGAATTTTAAGGACCTATTAGACACAATCTTGAAAGTTTCATTAAACTTATGAGTTAACCTTTTGATTTTAAGGTTTTAAATATATTTATTTATTATACATTATTGATTATAGAGCAGAACAATAGTATCTAAGTGAATATTTTTCTCACAACACCTGGAAGGTATTTTCTTTCTAAATTTGTATGAAGGTTACTTTTCCTCGCAAAGATTGTTAACAAACTGCTAGCTTGTTTATCTAGGACTTTTTCCCTTCAACTGTATGTCTATATAGGAAATTGCATAGAATGCAGATTTAGATCCTATTATCCTAGTTCTTATTTACAGCTTTTATTGAAAGGAGGTACTCATTCTCTTCATAACCCATTACTTTCTCATTCATGTCCAAGAAGAAAGTACCACTTGATAGATTCGTGTGGTTTTCTATTTGAAATCCACATAATTTGTAATCCTTATAGACATCATTGTATAATCTATATAGAACATATTCTATTCAAGTAAATTCACTATATTGTTTTTGTTTTTTTTTTTTTTTGTTTTTTTTAAAGAAAGAAAAATTAAAGAAACGAAATGGTATTAAGAGAAGAAGAGAGGAAAATACATCCTAGAGGGGGGGGTTGGGGGGTCAAAGTGTCATTTAGACACTTTTTAGCCATTCTTTGGTTGGTTTTGAGTTTAGAGGTCATAGTTGTGCATTTTGGAGTTGTTTTTGTAAGCAAAGTGTCATTTAGACACTTTTTAGCCATTCTTTGGTTGGTTTTGAGGTTAGAGGTCATAGTTGTGCATTTTGGAGTTGTTTTTGTAAGCAAAGTGTCTTTTGGACACTTTTTAGCCATTCTTTGGTTGGTTTTGAGTTTAGAGGTCATAGTTGTGCATTTTGAACTTGTTTTTGGAGTCAAAGTGTCATTTAGACACTTTTTAGCCATTCTTTGGTTGGTTTTGAATTTAGAGGTCATAGTTGTGCATTTTTGGACTTGTTTTTGGAGTCAAAGTGTCATTTAGACACTTTTTAGCCATTCTTTGGTTGGTTTTGAGTTTAGAGGTCATAGATTAGAGGTCACTAAAAAATTGTTGGGGCAAGAACAGGAAGGGGATAGATCTTAAAATACTTAGGTATTTTTTAAAATTAAAGTTCAAACTCTATTTATGAATGCATGTATATTATGTGTGGTTATCCTGCAGTTATGGTAGCTAATTCATCCATTTAGTGTTGTTATTATGTGCTTGAGTTGATTTTGATAATGTGTCACTTAGACATTTTTTAGGTACTTTTTAATTGGTTTTGATAATCAAAGTGCACATATGAACTATTTTGGTTGTTTGGGGAGTTAAATTGTTTCTTGAAAAACTTTTAGGTACTTTTTATGTTGGTTTGAGAGTATTTAAGTTATATATTTGTTTTGCTCGTATTGGATTAATGTGCTTGAGTTCTAAGGAGATATTTTTTTTTTTTTGTGATAAATATTTTTTGTATTATGTTTCACTTGTCCTTCCCTAAATGAAGAAGTTTTTCATTTGACCCTTATTCTTTCTAATAGACTAATGTATGAGTATTTCTACTTTTTAGTAGTTATACTCCTAAAAGGTTGGACAAGTTACAATAATTATATATTTGTTTTGCTCCTACTATACTATGTTTCACTTGTCCCCCCTGCCCCTAAACGAAGAAGTTTTTCAATTAACTCTTATTCTTTCTAGTAGACTAGTGTATAAGTTAAATTTGGAGGTTATCCATGTTATTAAGGTTGAAAAGTGAGATTATAATGTGATTTTGAGCCTATTTATGTGGTTATATTGTGATTCTATGTATAATTTTTGTTTGAAAGTGTTCATTGAAGCTTACTTGTATGACTAAAGTGGGGTTTTCAGTGCAAATGTATATAACAACATGATATTGTCACAGTACGATCAACATATATATAACCTGCATATTGTTATTATTGTTCACCTTTATATATTGAGTTAAATTCTGAAATGAATGTTTTTTTTTACAAGGTTCCTGGACAAGGCCATTGAAGTAAGGAAACCCACCAACCAAGATATTTAAATAGGTGTTGTATATATATATTTTTTTGGAATTATGCCAACACTTAGTTCTAAATACTAAATTTGTAAATGATGTACCCAAAATTTGGTTACTACTGTTGTTGTTAGTTTCCTTGTAGTAATGATAGAAAGTATATTATTTATATATGAAAGTTACTTTTTATGTTTATGTACATATTTTGTGTTGAAACTGAAGGAAACACGGGTGTAATAACATGTATGAAACATAGGTGTAATAACGTGTATAATTGAAATGGTTTTTTTGATATTTGACATAAGTCATCTATCAGACTTCTATGACTATAAATAAGTGACAATGTATGTAATTCAATGACCTTAAAAAAAATGTCATAATTAAGGTATTATTGACACTTTAGATGTGTCATTACTTGTTCNTCAATTAACTCTTATTCTTTCTAGTAGACTAGTGTATAAGTTAAATTTGGAGGTTATCCATGTTATTAAGGTTGAAAAGTGAGTTTATAATGTGACTTTGAGCCTATTTATGTGGTTATATTGTGATTCTATGTATAATTTTTGTTTGAAAGTGTTCATTGAAGCTTACTTGTATGACTAAAGTGGGGTTTTCAGTGCAAATGTATATAACAACATGATATTGTCACAGTACGATCAACATATATATAACCTGCATATTGTTATTATTGTTCACCTTTATATATTGAGTTAAATTCTGAAATGAATGTTTTTTTTTACAAGGTTCCTGGACAAGGCCATTGAAGTAAGGAAACCCACCAACCAAGATATTTAAATAGGTGTTGTATATATATATTTTTTTGGAATTATGCCAACACTTAGTTCTAAATACTAAATTTGTAAATGATGTACCCAAAATTTGGTTACTACTGTTGTTGTTAGTTTCCTTGTAGTAATGATAGAAAGTATATTATTTATATATGAAAGTTACTTTTTATGTTTATGTACATATTTTGTGTTGAAACTGAAGGAAACACGGGTGTAATAACATGTATGAAACATAGGTGTAATAACGTGTATAATTGAAATGGTTTTTTTGATATTTGACATAAGTCATCTATCAGACTTCTATGACTATAAATAAGTGACAATGTATGTAATTCAATGACCTTAAAAAAAATGTCATAATTAAGGTATTATTGACACTTTAGATGTGTCATTACTTGTTCCTCGATGACAGAATTTTAATGTCAAGATAACTCTTTATTTGACAGAAAAAGTCAACATTTTCATTATTTAATGACTGTAGAAAATTGTCACGAAAAATGGTTTCCATGACTTATAATAAATGTCAATACATGTTCTTTGTTGATTGTGTTTAAAAGTCATGAAACTAACAATGATGACTGATTTCTCATGTGTCATCTATACACTTTAGATGATGGGCGATTAAATGACTAAAAAAAAGAGTCAAGAAATGTGATAATGACTATTTTTTAGAGTCATAGAAGCCTATTTTTGTTGTAGTAGATGCGTTGAAGAGTCTCTGAAGAAAAGAGGTAAAAGACCATGTTGGACGGATGGTCAAGACTAGGTAACGCATGGTAAGGGTGGACGCATGGAAGTAAACCGAGAAGGGAAAGAAGTCAAACGCATAAGCAAGAAAGGAATAAAGTTATGTGTGAAGTGTTGAAATAGATTTAAGTCTCGGAAAGATAGAATACTATAGCAAATTGAGTAACGTATAGACTTATAGCAAGGAATGTTCACAAGTGTTGGAGAAGGTTGTGAAGTAAACATAAAAACTGGTGCATGTGGTGGACGCATGCTAATCTATCTTTAAGAGAAATAGTTTAAGTGCAAGGAAAAGGTTAAAATAATAACTTTGGGAATAATCAAGGAATGCTCAAGGATAAGAAGATGGTCATGGACGCAGGATGAAGGTGAACGCAATAGGACCAACGCATAGAGGAAGAGCTTGAGAAGGATTTGTCGTCATTGACGCCTAGTGGCATTGTGTAAGCACTGGTTTATAATAGTGCGACTATGCGTTGAAGGTGACCTCAAATGGTTGTTGTGAGCTGAAGTAGTTGCCGCGTTGGCAGGGGAAGATACGTACTTGGCTTACCATGCGTTGGTAAGGTTGTCATGCGTTGAGGTCCCAATGCGTTGAAGACAGAGTTATATCTATGTGTAAAAGACAGTAGTGTAGTTGGCTGAGAGTTAGAAAAGTGAGTAATGAAGCTCAAACCTTAAAGGAAACTCAACGAACGCATGAGAGCATTGTGTTGAATGAATGGTTGTCTATTGGAAAATGTTGGACGCATAAGATAAGTTTATAAAGGTTAGGTGGCTTTGTATAGATTTGACACCTTATCAGTAGGAGGTGTTAAAGGCATGTTAAGTGTTTCATGCAATATGACACTTGGACTAATGCATGGTTAATTAAGCATGCAGCGTGACATGTGGCAAACAAGTGGCAAAAGGAGAGGAAAGTTGATGGCAAGCTCCCTATAAATAGAACCTTGAGGGAAAAGGAGCGACTGATGACTCTGGAAGAAGAATTCTGGAGAGAAAGAGAAGAAAGAAGGCAGAAAGGAAGAATCTTTGCGTCCGTAGTAGGAGTCTGCGGCCAAGAAAGTAGGTATTTTGACAACTTAGCTATTTTATGTAAAAGAGGTTGTCTTGCGTCGAAAAGGGGTCGGCCTTGCGTTGAGAACAAACATAATGTCCAAGGTGAACGCGGCATCCAAAGTTAGGTGATGCGTTTATGTTGGACCTTACATCCAAGAGAGGGCGACGCATCCGAAAGAGAAGTAAGAAGAGTCGAGATGCACTTTGCGGAAATAATCAACCTTGCGTTGAAGGGCAGGGTTGCGTTCAACCGAGCTAACAGAGGAAAATGGAGTTTTGCATTTCTAAGATTAGAACGCTGCATCCAAGAAGCTCGGGAAGAGGAAATAGAGGAAAGGAAGAAGAAGTATTCTTTGGCAAGTACAGGTGAGTAACACCTGCGTTTTACAAAATATAAATGAGTTCTTTATGAATATGATTTTATGGGTTTTTAATGAAATAATGCATGCGTTTTCATATATAAAACATATAAATATGTGGTTTATAGAGATAAGAACATGCGTTTATATATACTTAAAAGAATATGAGCCAGCTGAGAGCATGCGTTTTACTTGAAAACTATGAGAATGTTGGGTACTTGCTATGAGTTATAAAACGCATGGTGAATGATTGATACTTGTTTTCATGACTTTTCTGAAAAGCATGGTATTGTATGATTTCAAGAAAGATTTGAAAACAAACTTTATGAAAAGCATGCGGTTTGATATTAAAACTGGAAATTGAATTTAGAATGGTGATGAGGTGAGATTTGGAAATGGTTAATTTATGAGTTATTGGTATAATGTTTCCAAAATATGTATTGTGTTATATTAAACTTGAGAAGGCACCCGAGGCTCAGGGACTTAGAGAAGGCCAAAGGGTAGCCGTTATATCGAAATGGGACCCCAATGCTCAGGGACTCGTAGAAGGCATTGAGGGCGGCCCGAATTCTAGTACCTATGTGCACATAAAGGTATATACGACGCTGATGTGTTGAGATTACTCCACACAGCTAAGGAAAATCGACGTTGAGGAGCGTTGAGCATTGCTCCGCCTCAACTAAGGAAAAAGTATTTTATAAGAATGAGATTTTTGAGTATTTATTCTGAAACGGACAAGCATGTTTTCACAATGGTGTTTGAGTATAATTTAATATGATTTGAAGTATTATATTTTATGTGAGTTTGACCAGTTTTACAGTTAAAATATATTGTTTTTAGAAAACCGTTACTCACTGAGCTGTTAGCTCACCCTTTTTATATGTTTTCTATTTTCAGGTAGCATGACAGTTCCCGTTGTTGATCGAAGTCGAGGTTTGTCAAGAGTATAATAATGGTATTACCATCCTAAGAAGGATTTTAAAGGGAATAAGATGAGATTGACAGTGGGTTACGTGACAGGGTAGTCGGTAACTGCTGTCCTCACACTCCGTCTCGGGCTATGGGAGGGTAGTTTGGGGTGGGGTGTGACACAAATGCTTGAAAAAGGGTATGCTTATTGTGGAGATGATCGAAGCAACAATTCTCCAAGGAGGTCTCGAACAGAAGATGAAAAAAGTGTTGAAATTTTTTTACGGTTTCTCCTAGGAGGTGAAACTTTTTCATTTGGGGATGAGAATGTTGCCTTATACACTTTCAAGAGCTAAAGTTTCTCAAAATCAGCTTGCGATCTAATTTGATGGGAGAAGATAATGCAAATCCCAAAATATATGCACATTTCATAAGGTTGTGTTGTGCCGGCAACTTGGGCATATTATGAGTGCAATGCTAATTCTTACTTGTTGCTATGTGTCACAATGCCTTCACACTTCAATAAGTAATTGTGTGGCACTTGTTTTTGCTTACGAACAAGTCAACCTATTCGATTTTTTATTACTTATGGCACATTGAGCGCCTATCAAAATCTCTACCTCTGTTTTTGGAGAAAACAGTTTTAGAAAATGGGTTTAGAGGAAAACGTTTTCGCAAACATTTGAAAGCATGTTTAAGAAAAGAAAGTTTGTCATAAGGTTAAGGGATAACAACGGCTTAATAGCTCATGTCACACCCCCTCCCAGATACCCCTTATCCCTAGGAGTGAGTGTGAAACTGCACACTTTCTACCCCGTGTAACACCCCCACCCTAGATATTATATATACTTCTATATCTTTACCTAGGAGTGAGTGTTACCTAATCTGTATTCTGTTAAACCATGTTATATATGCATTTCTATATCATAACTAGCTGGTGAAATGCTTAGCCTTTTGATGAGCACTTTTAGTGTTAACCGCAAGTGTACGGGTCAAGTTATAATATAAAATGGTTAAGTTCGAATATCGTTCCACTGGAGATCCAATTGGGAAGGTTTAAGTTACTTAGCTATTCTAGAATTGAATCAATTTTATTTGAGGATTGAAATTGAATATTATAAGTTATGGAAAAATACAAATCAAATAAGGAAAGTATCAAAGGGAGAAACACAAGAGTCAAAGAGAGTTCTACGGTAATGAATCCTTGTTTATTTCATCATGCAATATTATAGATTTCATGGATTTTATTGCAATTCATATGCCTAAGTCTAGAAACTTAATTCCAAGTTATTTTCTCTCAAAAACAACCCTTTCTCCTGCAACTTGATTGATTATTAATCTCTTAAAACCAACACAAAATTACATGGCATTAAAAATAGTCTTTAGCAACTTTTATTGTCAACCTAACTACTCTCGTGATAGATTAACAATGATTCATTGTTATAGATCAAGTTAAACATACAATCCCTCAATCATACATCTAACCTAACATGTGAAGATAGCCAATCCACAAGCATTAAACACAATAACACTGAAAAGCATAATCATTCCAACAAAACCATGAGTCTACAAAATTAACATGAATTCATAAACAATTCATCAAAACCCTAAAACTAAAAAGTTTAGCCATTCATAGCTTGAAGCAACATGTTTAAGAAAAATAAACAAAGAAAGAGTGTAAAGAAAGGGAAACTCTACTGAAAAGAGGCTCTTGATTGAAGTAGCACCGTCTCGATCTCCTTGGCTCTCAAGTCGGATTTCGAAGGGCACCAAGACTATCTCGAACTTTTTTCCTCTTCCTTGCAACTAACTCACTCTCTGAACCCTCACTTAATTCTCTCCTTTGTGCATCTCTTTAGGTCTGCAACTTCCTTGCTTTGCCTTGATTTTTCTTGATGAATTGGACTGCTGGAAACCCCCAAATTTTATAGAGTTTGGTCGCCCAAAATTTCCAAAAATACAGATTTTTCAATTAAGGAAAGCTGTCGCTAGGGCTGCATCCGAAAAAGTTTGCTCTCGGGTTTTAGCACCGCGGCAGCGCCGTCCAAGCGTCGCAGCGCTAAAATGCGTCTCAGAAATATTGCTCTCGGGTTTTAGCGTCGCGGTAGCGCCGTCTAAGCGTCACAGCGCTAGAATGCGTTTCAGCAAGGATGCGTCGAGGCAGCGCCATCTTGGCGCCGCAATGCTACTCTGCGTCCAGAACCATGCGTTGATGTTTCAGCGCCGCGGCGCTATCCCCAAAATTTGCCCTTTTTGGTTTTTCAACTCTTTTTTGCCATATTCTTGCTCGGTTTTGATCTTTTAA

mRNA sequence

ATGGCAACCTGTTGTGGAGGAAATAATTTTGGTGTAAACGCAAAGGTAACGGAAGCTGATCATGCGTTGAAGTTGAGACGCGTTGAGGACATAAGACGTGGAGGATCATTATGCGTCAAACGCATTGAAGGCAATGTGCCGATTAGAAGTAAGGGCCACGAGGAGTTTGGGAGCTGGTCTGCGGTGAGGCTGTTGTGCGGCGAACACTACCATGCGTCGAAGGCTGAGGCCGTGTGTGTTGCTGAAACTGAGCATAGGAGGAAGAAGAGACGGGAGTTGAACTGTCGAATGAGTGGAGGTAACTCGGAGTTGTCGAAGGATATGTCCCAAACGGGGAAGATGTGCTTCATGAAATTTTTAGGCTTGCGTCTCACAACTCTCGCTAGAGTATCGCTGGGTATCGCTCCTCAAGGCCAAGAAGAGCTCGGGGAGGCTTATAACCCACTTAGAGCCGGGACCGATTCGAGCGTGTCCGGGACGCCTAGCCTACTGAAGAATCTCGTCTGGACCTATCTGGAAGCGAACCTCTGGGATAGTTTCGCTGTCGCTGCCACCATCTTCGTGAAGAAGGGAGGAGGAAGGAGAATGGAGTCCACTGAGTCTTCATACATCTCGTCCCTAGAGGCTCCTGCAAAGCAATCTCCTCCGCCGCCAAAATCTCCAAACTCGGCACTTGAAAAGTGCTTTCTATTCTCTCAAATTAAGGGAGTTTATATTAGATTTCACTTGTTTGCTAGTGATTTTCAGACGCAGAGTAGCATTGCGGCGCCAAGATGGCGCTGCCTCGACGCATCCTTGCTGAAACGCATTCTAGCGCTGCGACACTTAGACGACGCTGCCGCGACGCTAAAACCCGAGAGCAATATTTCTGAAACGCATTTTAGCGCTGCGACGCGTGGACGGCGCTGTCGTGGCGCTAAAACCCGAGAGCAAGCTTTTTCGGATGCAGCCCTAGCGCCGCGACGCCAGCTTTCTTTAATTGAAAAATCTACTCATGGTTTTGTTGGAATGATTATGCTTTTCATTGTTATTGTGTTTAATGCTTGTGGATTGGCTATCTTCACATGTGGTTCAACAATTAATGATTTCCAGTCACAGTCTGGTGCACGAATCCAATTGTCACGGAACCATGAAGTTTTTCCTGGAACCACTGATAGGATCGTTATGGCCATAGAACTCGTTCTTGCTAAGTTGTTGAGTGAGCTTCATGCTGAAGAAGGAGCTGATGTTGAACCGAGAACAAAAGACCAACGCATAGAGGAAGAGCTTGAGAAGGATTTGTCGTCATTGACGCCTAGTGGCATTGTAGAGGGCGACGCATCCGAAAGAGAAGTAAGAAGAGTCGAGATGCACTTTGCGGAAATAATCAACCTTGCGTTGAAGGGCAGGGTTGCGTTCAACCGAGCTAACAGAGGAAAATGGAGTTTTGCATTTCTAAGATTAGAACGCTGCATCCAAGAAGCTCGGGAAGAGGAAATAGAGGAAAGGAAGAAGAAGTATTCTTTGGCAAGTACAGGTAGCATGACAGTTCCCGTTGTTGATCGAAGTCGAGGTCTGCAACTTCCTTGCTTTGCCTTGATTTTTCTTGATGAATTGGACTGCTGGAAACCCCCAAATTTTATAGAGTTTGGTCGCCCAAAATTTCCAAAAATACAGATTTTTCAATTAAGGAAAGCTGTCGCTAGGGCTGCATCCGAAAAAGTTTGCTCTCGGGTTTTAGCACCGCGGCAGCGCCGTCCAAGCGTCGCAGCGCTAAAATGCGTCTCAGAAATATTGCTCTCGGGTTTTAGCGTCGCGGTAGCGCCGTCTAAGCGTCACAGCGCTAGAATGCGTTTCAGCAAGGATGCGTCGAGGCAGCGCCATCTTGGCGCCGCAATGCTACTCTGCGTCCAGAACCATGCGTTGATGTTTCAGCGCCGCGGCGCTATCCCCAAAATTTGCCCTTTTTGGTTTTTCAACTCTTTTTTGCCATATTCTTGCTCGGTTTTGATCTTTTAA

Coding sequence (CDS)

ATGGCAACCTGTTGTGGAGGAAATAATTTTGGTGTAAACGCAAAGGTAACGGAAGCTGATCATGCGTTGAAGTTGAGACGCGTTGAGGACATAAGACGTGGAGGATCATTATGCGTCAAACGCATTGAAGGCAATGTGCCGATTAGAAGTAAGGGCCACGAGGAGTTTGGGAGCTGGTCTGCGGTGAGGCTGTTGTGCGGCGAACACTACCATGCGTCGAAGGCTGAGGCCGTGTGTGTTGCTGAAACTGAGCATAGGAGGAAGAAGAGACGGGAGTTGAACTGTCGAATGAGTGGAGGTAACTCGGAGTTGTCGAAGGATATGTCCCAAACGGGGAAGATGTGCTTCATGAAATTTTTAGGCTTGCGTCTCACAACTCTCGCTAGAGTATCGCTGGGTATCGCTCCTCAAGGCCAAGAAGAGCTCGGGGAGGCTTATAACCCACTTAGAGCCGGGACCGATTCGAGCGTGTCCGGGACGCCTAGCCTACTGAAGAATCTCGTCTGGACCTATCTGGAAGCGAACCTCTGGGATAGTTTCGCTGTCGCTGCCACCATCTTCGTGAAGAAGGGAGGAGGAAGGAGAATGGAGTCCACTGAGTCTTCATACATCTCGTCCCTAGAGGCTCCTGCAAAGCAATCTCCTCCGCCGCCAAAATCTCCAAACTCGGCACTTGAAAAGTGCTTTCTATTCTCTCAAATTAAGGGAGTTTATATTAGATTTCACTTGTTTGCTAGTGATTTTCAGACGCAGAGTAGCATTGCGGCGCCAAGATGGCGCTGCCTCGACGCATCCTTGCTGAAACGCATTCTAGCGCTGCGACACTTAGACGACGCTGCCGCGACGCTAAAACCCGAGAGCAATATTTCTGAAACGCATTTTAGCGCTGCGACGCGTGGACGGCGCTGTCGTGGCGCTAAAACCCGAGAGCAAGCTTTTTCGGATGCAGCCCTAGCGCCGCGACGCCAGCTTTCTTTAATTGAAAAATCTACTCATGGTTTTGTTGGAATGATTATGCTTTTCATTGTTATTGTGTTTAATGCTTGTGGATTGGCTATCTTCACATGTGGTTCAACAATTAATGATTTCCAGTCACAGTCTGGTGCACGAATCCAATTGTCACGGAACCATGAAGTTTTTCCTGGAACCACTGATAGGATCGTTATGGCCATAGAACTCGTTCTTGCTAAGTTGTTGAGTGAGCTTCATGCTGAAGAAGGAGCTGATGTTGAACCGAGAACAAAAGACCAACGCATAGAGGAAGAGCTTGAGAAGGATTTGTCGTCATTGACGCCTAGTGGCATTGTAGAGGGCGACGCATCCGAAAGAGAAGTAAGAAGAGTCGAGATGCACTTTGCGGAAATAATCAACCTTGCGTTGAAGGGCAGGGTTGCGTTCAACCGAGCTAACAGAGGAAAATGGAGTTTTGCATTTCTAAGATTAGAACGCTGCATCCAAGAAGCTCGGGAAGAGGAAATAGAGGAAAGGAAGAAGAAGTATTCTTTGGCAAGTACAGGTAGCATGACAGTTCCCGTTGTTGATCGAAGTCGAGGTCTGCAACTTCCTTGCTTTGCCTTGATTTTTCTTGATGAATTGGACTGCTGGAAACCCCCAAATTTTATAGAGTTTGGTCGCCCAAAATTTCCAAAAATACAGATTTTTCAATTAAGGAAAGCTGTCGCTAGGGCTGCATCCGAAAAAGTTTGCTCTCGGGTTTTAGCACCGCGGCAGCGCCGTCCAAGCGTCGCAGCGCTAAAATGCGTCTCAGAAATATTGCTCTCGGGTTTTAGCGTCGCGGTAGCGCCGTCTAAGCGTCACAGCGCTAGAATGCGTTTCAGCAAGGATGCGTCGAGGCAGCGCCATCTTGGCGCCGCAATGCTACTCTGCGTCCAGAACCATGCGTTGATGTTTCAGCGCCGCGGCGCTATCCCCAAAATTTGCCCTTTTTGGTTTTTCAACTCTTTTTTGCCATATTCTTGCTCGGTTTTGATCTTTTAA

Protein sequence

MATCCGGNNFGVNAKVTEADHALKLRRVEDIRRGGSLCVKRIEGNVPIRSKGHEEFGSWSAVRLLCGEHYHASKAEAVCVAETEHRRKKRRELNCRMSGGNSELSKDMSQTGKMCFMKFLGLRLTTLARVSLGIAPQGQEELGEAYNPLRAGTDSSVSGTPSLLKNLVWTYLEANLWDSFAVAATIFVKKGGGRRMESTESSYISSLEAPAKQSPPPPKSPNSALEKCFLFSQIKGVYIRFHLFASDFQTQSSIAAPRWRCLDASLLKRILALRHLDDAAATLKPESNISETHFSAATRGRRCRGAKTREQAFSDAALAPRRQLSLIEKSTHGFVGMIMLFIVIVFNACGLAIFTCGSTINDFQSQSGARIQLSRNHEVFPGTTDRIVMAIELVLAKLLSELHAEEGADVEPRTKDQRIEEELEKDLSSLTPSGIVEGDASEREVRRVEMHFAEIINLALKGRVAFNRANRGKWSFAFLRLERCIQEAREEEIEERKKKYSLASTGSMTVPVVDRSRGLQLPCFALIFLDELDCWKPPNFIEFGRPKFPKIQIFQLRKAVARAASEKVCSRVLAPRQRRPSVAALKCVSEILLSGFSVAVAPSKRHSARMRFSKDASRQRHLGAAMLLCVQNHALMFQRRGAIPKICPFWFFNSFLPYSCSVLIF

Homology

[Close]

BLAST of ClCG11G007340 vs. NCBI nr
Match: KAG7031990.1 (Protein BTR1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 111.3 bits (277), Expect = 3.2e-20
Identity = 89/237 (37.55%), Postives = 98/237 (41.35%), Query Frame = 0


Query: 189 KKGGGRRMESTESSYISSLEAPAKQSPPPPKSPNSALEKCFLFSQIKGVYIRFHLFASDF 248
           ++GG RRMESTESSY+SS EAP K+SPPPPKSPNS        +  K  YIRF       
Sbjct: 41  REGGERRMESTESSYVSSPEAPTKRSPPPPKSPNSD-------NMEKATYIRF------- 100

Query: 249 QTQSSIAAPRWRCLDASLLKRILALRHLDDAAATLKPESNISETHFSAATRGRRCRGAKT 308
                                                                       
Sbjct: 101 ------------------------------------------------------------ 160

Query: 309 REQAFSDAALAPRRQLSLIEKSTHGFVGMIMLFIVIVFNACGLAIFTCGSTINDFQSQSG 368
                                             ++   A G  I   GSTINDFQSQSG
Sbjct: 161 ----------------------------------LVSNAAAGSVIGKGGSTINDFQSQSG 169

Query: 369 ARIQLSRNHEVFPGTTDRIVM----------AIELVLAKLLSELHAEEGADVEPRTK 416
           ARIQLSRNHE FPGTTDRI+M          A+ELVLAKLLSELHAEE  D EPRTK
Sbjct: 221 ARIQLSRNHEFFPGTTDRIIMVSGTINEILKAMELVLAKLLSELHAEEVDDAEPRTK 169

[Close]

BLAST of ClCG11G007340 vs. NCBI nr
Match: XP_022945468.1 (protein BTR1 [Cucurbita moschata] >XP_022968196.1 protein BTR1-like [Cucurbita maxima] >XP_023542949.1 protein BTR1-like [Cucurbita pepo subsp. pepo] >KAG6573860.1 Protein BTR1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012924.1 Protein BTR1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 110.2 bits (274), Expect = 7.2e-20
Identity = 88/230 (38.26%), Postives = 96/230 (41.74%), Query Frame = 0


Query: 196 MESTESSYISSLEAPAKQSPPPPKSPNSALEKCFLFSQIKGVYIRFHLFASDFQTQSSIA 255
           MESTESSY+SS EAPAK+SPPPPKSPNS        +  KG YIRF              
Sbjct: 1   MESTESSYVSSPEAPAKRSPPPPKSPNSD-------NMEKGTYIRF-------------- 60

Query: 256 APRWRCLDASLLKRILALRHLDDAAATLKPESNISETHFSAATRGRRCRGAKTREQAFSD 315
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 316 AALAPRRQLSLIEKSTHGFVGMIMLFIVIVFNACGLAIFTCGSTINDFQSQSGARIQLSR 375
                                      ++   A G  I   GSTINDFQSQSGARIQLSR
Sbjct: 121 ---------------------------LVSNAAAGSVIGKGGSTINDFQSQSGARIQLSR 122

Query: 376 NHEVFPGTTDRIVM----------AIELVLAKLLSELHAEEGADVEPRTK 416
           NHE FPGTTDRI+M          A++LVLAKLLSELHAEEG DVEPRTK
Sbjct: 181 NHEFFPGTTDRIIMVSGTINEILKAMDLVLAKLLSELHAEEGDDVEPRTK 122

[Close]

BLAST of ClCG11G007340 vs. NCBI nr
Match: XP_022139256.1 (protein BTR1 [Momordica charantia])

HSP 1 Score: 109.0 bits (271), Expect = 1.6e-19
Identity = 88/230 (38.26%), Postives = 95/230 (41.30%), Query Frame = 0


Query: 196 MESTESSYISSLEAPAKQSPPPPKSPNSALEKCFLFSQIKGVYIRFHLFASDFQTQSSIA 255
           MESTESSY+SS EAPAK+SPPPPKSPNS        +  K  YIRF              
Sbjct: 1   MESTESSYVSSPEAPAKRSPPPPKSPNSD-------NMDKATYIRF-------------- 60

Query: 256 APRWRCLDASLLKRILALRHLDDAAATLKPESNISETHFSAATRGRRCRGAKTREQAFSD 315
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 316 AALAPRRQLSLIEKSTHGFVGMIMLFIVIVFNACGLAIFTCGSTINDFQSQSGARIQLSR 375
                                      ++   A G  I   GSTINDFQSQSGARIQLSR
Sbjct: 121 ---------------------------LVSNAAAGSVIGKGGSTINDFQSQSGARIQLSR 122

Query: 376 NHEVFPGTTDRIVM----------AIELVLAKLLSELHAEEGADVEPRTK 416
           NHE FPGTTDRI+M          A+ELVLAKLLSELHAEEG DVEPRTK
Sbjct: 181 NHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTK 122

[Close]

BLAST of ClCG11G007340 vs. NCBI nr
Match: XP_011655857.1 (protein BTR1 isoform X2 [Cucumis sativus] >KGN52226.1 hypothetical protein Csa_008143 [Cucumis sativus])

HSP 1 Score: 109.0 bits (271), Expect = 1.6e-19
Identity = 88/230 (38.26%), Postives = 95/230 (41.30%), Query Frame = 0


Query: 196 MESTESSYISSLEAPAKQSPPPPKSPNSALEKCFLFSQIKGVYIRFHLFASDFQTQSSIA 255
           MESTESSY+SS EAPAK+SPPPPKSPNS        +  K  YIRF              
Sbjct: 1   MESTESSYVSSPEAPAKRSPPPPKSPNSD-------NMEKATYIRF-------------- 60

Query: 256 APRWRCLDASLLKRILALRHLDDAAATLKPESNISETHFSAATRGRRCRGAKTREQAFSD 315
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 316 AALAPRRQLSLIEKSTHGFVGMIMLFIVIVFNACGLAIFTCGSTINDFQSQSGARIQLSR 375
                                      ++   A G  I   GSTINDFQSQSGARIQLSR
Sbjct: 121 ---------------------------LVSNAAAGSVIGKGGSTINDFQSQSGARIQLSR 122

Query: 376 NHEVFPGTTDRIVM----------AIELVLAKLLSELHAEEGADVEPRTK 416
           NHE FPGTTDRI+M          A+ELVLAKLLSELHAEEG DVEPRTK
Sbjct: 181 NHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTK 122

[Close]

BLAST of ClCG11G007340 vs. NCBI nr
Match: XP_004142445.1 (protein BTR1 isoform X1 [Cucumis sativus])

HSP 1 Score: 109.0 bits (271), Expect = 1.6e-19
Identity = 88/230 (38.26%), Postives = 95/230 (41.30%), Query Frame = 0


Query: 196 MESTESSYISSLEAPAKQSPPPPKSPNSALEKCFLFSQIKGVYIRFHLFASDFQTQSSIA 255
           MESTESSY+SS EAPAK+SPPPPKSPNS        +  K  YIRF              
Sbjct: 1   MESTESSYVSSPEAPAKRSPPPPKSPNSD-------NMEKATYIRF-------------- 60

Query: 256 APRWRCLDASLLKRILALRHLDDAAATLKPESNISETHFSAATRGRRCRGAKTREQAFSD 315
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 316 AALAPRRQLSLIEKSTHGFVGMIMLFIVIVFNACGLAIFTCGSTINDFQSQSGARIQLSR 375
                                      ++   A G  I   GSTINDFQSQSGARIQLSR
Sbjct: 121 ---------------------------LVSNAAAGSVIGKGGSTINDFQSQSGARIQLSR 122

Query: 376 NHEVFPGTTDRIVM----------AIELVLAKLLSELHAEEGADVEPRTK 416
           NHE FPGTTDRI+M          A+ELVLAKLLSELHAEEG DVEPRTK
Sbjct: 181 NHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTK 122

[Close]

BLAST of ClCG11G007340 vs. ExPASy Swiss-Prot
Match: Q9LZ82 (Protein BTR1 OS=Arabidopsis thaliana OX=3702 GN=BTR1 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.7e-14
Identity = 45/78 (57.69%), Postives = 54/78 (69.23%), Query Frame = 0


Query: 348 ACGLAIFTCGSTINDFQSQSGARIQLSRNHEVFPGTTDRIVM----------AIELVLAK 407
           A G  I   GSTI +FQ++SGARIQLSRN E FPGTTDRI+M           +EL+L K
Sbjct: 45  AAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLELILDK 104

Query: 408 LLSELHAEEGADVEPRTK 416
           L SELHAE+G +VEPR +
Sbjct: 105 LHSELHAEDGNEVEPRRR 122

[Close]

BLAST of ClCG11G007340 vs. ExPASy TrEMBL
Match: A0A6J1HU77 (protein BTR1-like OS=Cucurbita maxima OX=3661 GN=LOC111467502 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.5e-20
Identity = 88/230 (38.26%), Postives = 96/230 (41.74%), Query Frame = 0


Query: 196 MESTESSYISSLEAPAKQSPPPPKSPNSALEKCFLFSQIKGVYIRFHLFASDFQTQSSIA 255
           MESTESSY+SS EAPAK+SPPPPKSPNS        +  KG YIRF              
Sbjct: 1   MESTESSYVSSPEAPAKRSPPPPKSPNSD-------NMEKGTYIRF-------------- 60

Query: 256 APRWRCLDASLLKRILALRHLDDAAATLKPESNISETHFSAATRGRRCRGAKTREQAFSD 315
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 316 AALAPRRQLSLIEKSTHGFVGMIMLFIVIVFNACGLAIFTCGSTINDFQSQSGARIQLSR 375
                                      ++   A G  I   GSTINDFQSQSGARIQLSR
Sbjct: 121 ---------------------------LVSNAAAGSVIGKGGSTINDFQSQSGARIQLSR 122

Query: 376 NHEVFPGTTDRIVM----------AIELVLAKLLSELHAEEGADVEPRTK 416
           NHE FPGTTDRI+M          A++LVLAKLLSELHAEEG DVEPRTK
Sbjct: 181 NHEFFPGTTDRIIMVSGTINEILKAMDLVLAKLLSELHAEEGDDVEPRTK 122

[Close]

BLAST of ClCG11G007340 vs. ExPASy TrEMBL
Match: A0A6J1G0Z7 (protein BTR1 OS=Cucurbita moschata OX=3662 GN=LOC111449694 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.5e-20
Identity = 88/230 (38.26%), Postives = 96/230 (41.74%), Query Frame = 0


Query: 196 MESTESSYISSLEAPAKQSPPPPKSPNSALEKCFLFSQIKGVYIRFHLFASDFQTQSSIA 255
           MESTESSY+SS EAPAK+SPPPPKSPNS        +  KG YIRF              
Sbjct: 1   MESTESSYVSSPEAPAKRSPPPPKSPNSD-------NMEKGTYIRF-------------- 60

Query: 256 APRWRCLDASLLKRILALRHLDDAAATLKPESNISETHFSAATRGRRCRGAKTREQAFSD 315
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 316 AALAPRRQLSLIEKSTHGFVGMIMLFIVIVFNACGLAIFTCGSTINDFQSQSGARIQLSR 375
                                      ++   A G  I   GSTINDFQSQSGARIQLSR
Sbjct: 121 ---------------------------LVSNAAAGSVIGKGGSTINDFQSQSGARIQLSR 122

Query: 376 NHEVFPGTTDRIVM----------AIELVLAKLLSELHAEEGADVEPRTK 416
           NHE FPGTTDRI+M          A++LVLAKLLSELHAEEG DVEPRTK
Sbjct: 181 NHEFFPGTTDRIIMVSGTINEILKAMDLVLAKLLSELHAEEGDDVEPRTK 122

[Close]

BLAST of ClCG11G007340 vs. ExPASy TrEMBL
Match: A0A0A0KWP6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G621940 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 7.7e-20
Identity = 88/230 (38.26%), Postives = 95/230 (41.30%), Query Frame = 0


Query: 196 MESTESSYISSLEAPAKQSPPPPKSPNSALEKCFLFSQIKGVYIRFHLFASDFQTQSSIA 255
           MESTESSY+SS EAPAK+SPPPPKSPNS        +  K  YIRF              
Sbjct: 1   MESTESSYVSSPEAPAKRSPPPPKSPNSD-------NMEKATYIRF-------------- 60

Query: 256 APRWRCLDASLLKRILALRHLDDAAATLKPESNISETHFSAATRGRRCRGAKTREQAFSD 315
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 316 AALAPRRQLSLIEKSTHGFVGMIMLFIVIVFNACGLAIFTCGSTINDFQSQSGARIQLSR 375
                                      ++   A G  I   GSTINDFQSQSGARIQLSR
Sbjct: 121 ---------------------------LVSNAAAGSVIGKGGSTINDFQSQSGARIQLSR 122

Query: 376 NHEVFPGTTDRIVM----------AIELVLAKLLSELHAEEGADVEPRTK 416
           NHE FPGTTDRI+M          A+ELVLAKLLSELHAEEG DVEPRTK
Sbjct: 181 NHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTK 122

[Close]

BLAST of ClCG11G007340 vs. ExPASy TrEMBL
Match: A0A6J1CC53 (protein BTR1 OS=Momordica charantia OX=3673 GN=LOC111010213 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 7.7e-20
Identity = 88/230 (38.26%), Postives = 95/230 (41.30%), Query Frame = 0


Query: 196 MESTESSYISSLEAPAKQSPPPPKSPNSALEKCFLFSQIKGVYIRFHLFASDFQTQSSIA 255
           MESTESSY+SS EAPAK+SPPPPKSPNS        +  K  YIRF              
Sbjct: 1   MESTESSYVSSPEAPAKRSPPPPKSPNSD-------NMDKATYIRF-------------- 60

Query: 256 APRWRCLDASLLKRILALRHLDDAAATLKPESNISETHFSAATRGRRCRGAKTREQAFSD 315
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 316 AALAPRRQLSLIEKSTHGFVGMIMLFIVIVFNACGLAIFTCGSTINDFQSQSGARIQLSR 375
                                      ++   A G  I   GSTINDFQSQSGARIQLSR
Sbjct: 121 ---------------------------LVSNAAAGSVIGKGGSTINDFQSQSGARIQLSR 122

Query: 376 NHEVFPGTTDRIVM----------AIELVLAKLLSELHAEEGADVEPRTK 416
           NHE FPGTTDRI+M          A+ELVLAKLLSELHAEEG DVEPRTK
Sbjct: 181 NHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTK 122

[Close]

BLAST of ClCG11G007340 vs. ExPASy TrEMBL
Match: A0A1S3BFZ8 (protein BTR1 OS=Cucumis melo OX=3656 GN=LOC103489424 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 7.7e-20
Identity = 88/230 (38.26%), Postives = 95/230 (41.30%), Query Frame = 0


Query: 196 MESTESSYISSLEAPAKQSPPPPKSPNSALEKCFLFSQIKGVYIRFHLFASDFQTQSSIA 255
           MESTESSY+SS EAPAK+SPPPPKSPNS        +  K  YIRF              
Sbjct: 1   MESTESSYVSSPEAPAKRSPPPPKSPNSD-------NMDKATYIRF-------------- 60

Query: 256 APRWRCLDASLLKRILALRHLDDAAATLKPESNISETHFSAATRGRRCRGAKTREQAFSD 315
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 316 AALAPRRQLSLIEKSTHGFVGMIMLFIVIVFNACGLAIFTCGSTINDFQSQSGARIQLSR 375
                                      ++   A G  I   GSTINDFQSQSGARIQLSR
Sbjct: 121 ---------------------------LVSNAAAGSVIGKGGSTINDFQSQSGARIQLSR 122

Query: 376 NHEVFPGTTDRIVM----------AIELVLAKLLSELHAEEGADVEPRTK 416
           NHE FPGTTDRI+M          A+ELVLAKLLSELHAEEG DVEPRTK
Sbjct: 181 NHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTK 122

[Close]

BLAST of ClCG11G007340 vs. TAIR 10
Match: AT5G04430.2 (binding to TOMV RNA 1L (long form) )

HSP 1 Score: 82.0 bits (201), Expect = 1.9e-15
Identity = 45/78 (57.69%), Postives = 54/78 (69.23%), Query Frame = 0


Query: 348 ACGLAIFTCGSTINDFQSQSGARIQLSRNHEVFPGTTDRIVM----------AIELVLAK 407
           A G  I   GSTI +FQ++SGARIQLSRN E FPGTTDRI+M           +EL+L K
Sbjct: 45  AAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLELILDK 104

Query: 408 LLSELHAEEGADVEPRTK 416
           L SELHAE+G +VEPR +
Sbjct: 105 LHSELHAEDGNEVEPRRR 122

[Close]

BLAST of ClCG11G007340 vs. TAIR 10
Match: AT5G04430.1 (binding to TOMV RNA 1L (long form) )

HSP 1 Score: 82.0 bits (201), Expect = 1.9e-15
Identity = 45/78 (57.69%), Postives = 54/78 (69.23%), Query Frame = 0


Query: 348 ACGLAIFTCGSTINDFQSQSGARIQLSRNHEVFPGTTDRIVM----------AIELVLAK 407
           A G  I   GSTI +FQ++SGARIQLSRN E FPGTTDRI+M           +EL+L K
Sbjct: 45  AAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLELILDK 104

Query: 408 LLSELHAEEGADVEPRTK 416
           L SELHAE+G +VEPR +
Sbjct: 105 LHSELHAEDGNEVEPRRR 122

The following BLAST results are available for this feature:

BLAST of ClCG11G007340 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7031990.1	3.2e-20	37.55	Protein BTR1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022945468.1	7.2e-20	38.26	protein BTR1 [Cucurbita moschata] >XP_022968196.1 protein BTR1-like [Cucurbita m...	[more]
XP_022139256.1	1.6e-19	38.26	protein BTR1 [Momordica charantia]	[more]
XP_011655857.1	1.6e-19	38.26	protein BTR1 isoform X2 [Cucumis sativus] >KGN52226.1 hypothetical protein Csa_0...	[more]
XP_004142445.1	1.6e-19	38.26	protein BTR1 isoform X1 [Cucumis sativus]	[more]

BLAST of ClCG11G007340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZ82	2.7e-14	57.69	Protein BTR1 OS=Arabidopsis thaliana OX=3702 GN=BTR1 PE=1 SV=1	[more]

BLAST of ClCG11G007340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HU77	3.5e-20	38.26	protein BTR1-like OS=Cucurbita maxima OX=3661 GN=LOC111467502 PE=4 SV=1	[more]
A0A6J1G0Z7	3.5e-20	38.26	protein BTR1 OS=Cucurbita moschata OX=3662 GN=LOC111449694 PE=4 SV=1	[more]
A0A0A0KWP6	7.7e-20	38.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G621940 PE=4 SV=1	[more]
A0A6J1CC53	7.7e-20	38.26	protein BTR1 OS=Momordica charantia OX=3673 GN=LOC111010213 PE=4 SV=1	[more]
A0A1S3BFZ8	7.7e-20	38.26	protein BTR1 OS=Cucumis melo OX=3656 GN=LOC103489424 PE=4 SV=1	[more]

BLAST of ClCG11G007340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04430.2	1.9e-15	57.69	binding to TOMV RNA 1L (long form)	[more]
AT5G04430.1	1.9e-15	57.69	binding to TOMV RNA 1L (long form)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 341..392 e-value: 2.2E-5 score: 26.2
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 340..393
None	No IPR available	PANTHER	PTHR10288:SF254	PROTEIN BTR1	coord: 349..415
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 349..415

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G007340.2	ClCG11G007340.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding