ClCG10G015940 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGGATTCATCGAGAAAATTGGTGAGAAGCTCCACATTGGAGGAGACCACAACAAAGGGGAGCATCACGATGCTCATAAAGGCGACCATCACGATGCCCACAAAGGAGAGCATCACGATGAACACAAGAAGCACGGCAAATCGGAGGAGCACCATGGAGAAGGCCACAAGGAAGGGCTGATTGACAAGATCAAGGACAAGATCCATGGAGATCATGATGACAAAGGGGAGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGGATGAGCACCACCACCACGACGGCGGCCATAGCAGCAGCGATAGCGACAGCGACTGA ATGTCTGGATTCATCGAGAAAATTGGTGAGAAGCTCCACATTGGAGGAGACCACAACAAAGGGGAGCATCACGATGCTCATAAAGGCGACCATCACGATGCCCACAAAGGAGAGCATCACGATGAACACAAGAAGCACGGCAAATCGGAGGAGCACCATGGAGAAGGCCACAAGGAAGGGCTGATTGACAAGATCAAGGACAAGATCCATGGAGATCATGATGACAAAGGGGAGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGGATGAGCACCACCACCACGACGGCGGCCATAGCAGCAGCGATAGCGACAGCGACTGA ATGTCTGGATTCATCGAGAAAATTGGTGAGAAGCTCCACATTGGAGGAGACCACAACAAAGGGGAGCATCACGATGCTCATAAAGGCGACCATCACGATGCCCACAAAGGAGAGCATCACGATGAACACAAGAAGCACGGCAAATCGGAGGAGCACCATGGAGAAGGCCACAAGGAAGGGCTGATTGACAAGATCAAGGACAAGATCCATGGAGATCATGATGACAAAGGGGAGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGGATGAGCACCACCACCACGACGGCGGCCATAGCAGCAGCGATAGCGACAGCGACTGA MSGFIEKIGEKLHIGGDHNKGEHHDAHKGDHHDAHKGEHHDEHKKHGKSEEHHGEGHKEGLIDKIKDKIHGDHDDKGEKKKKKEKKKKDEHHHHDGGHSSSDSDSD Homology
BLAST of ClCG10G015940 vs. NCBI nr
Match: XP_038903205.1 (protein SRC1 [Benincasa hispida]) HSP 1 Score: 165.6 bits (418), Expect = 2.3e-37 Identity = 94/108 (87.04%), Postives = 96/108 (88.89%), Query Frame = 0
BLAST of ClCG10G015940 vs. NCBI nr
Match: XP_008443295.1 (PREDICTED: protein SRC1 [Cucumis melo] >KAA0053854.1 zinc transporter ZIP6 [Cucumis melo var. makuwa] >TYK25548.1 zinc transporter ZIP6 [Cucumis melo var. makuwa]) HSP 1 Score: 134.8 bits (338), Expect = 4.3e-28 Identity = 81/109 (74.31%), Postives = 88/109 (80.73%), Query Frame = 0
BLAST of ClCG10G015940 vs. NCBI nr
Match: XP_011652200.1 (protein SRC1 [Cucumis sativus] >KAE8651191.1 hypothetical protein Csa_001440 [Cucumis sativus]) HSP 1 Score: 129.8 bits (325), Expect = 1.4e-26 Identity = 83/109 (76.15%), Postives = 92/109 (84.40%), Query Frame = 0
BLAST of ClCG10G015940 vs. NCBI nr
Match: KAG6596975.1 (Protein SRC1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 120.9 bits (302), Expect = 6.5e-24 Identity = 81/108 (75.00%), Postives = 89/108 (82.41%), Query Frame = 0
BLAST of ClCG10G015940 vs. NCBI nr
Match: XP_022942109.1 (protein SRC1-like [Cucurbita moschata]) HSP 1 Score: 117.9 bits (294), Expect = 5.5e-23 Identity = 79/108 (73.15%), Postives = 88/108 (81.48%), Query Frame = 0
BLAST of ClCG10G015940 vs. ExPASy Swiss-Prot
Match: O04132 (Protein SRC1 OS=Glycine max OX=3847 GN=SRC1 PE=2 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 1.3e-22 Identity = 70/104 (67.31%), Postives = 76/104 (73.08%), Query Frame = 0
BLAST of ClCG10G015940 vs. ExPASy Swiss-Prot
Match: Q9SLJ2 (Dehydrin HIRD11 OS=Arabidopsis thaliana OX=3702 GN=HIRD11 PE=1 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 2.9e-11 Identity = 57/115 (49.57%), Postives = 69/115 (60.00%), Query Frame = 0
BLAST of ClCG10G015940 vs. ExPASy TrEMBL
Match: A0A5A7UF86 (Zinc transporter ZIP6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007000 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 2.1e-28 Identity = 81/109 (74.31%), Postives = 88/109 (80.73%), Query Frame = 0
BLAST of ClCG10G015940 vs. ExPASy TrEMBL
Match: A0A1S3B8E4 (protein SRC1 OS=Cucumis melo OX=3656 GN=LOC103486916 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 2.1e-28 Identity = 81/109 (74.31%), Postives = 88/109 (80.73%), Query Frame = 0
BLAST of ClCG10G015940 vs. ExPASy TrEMBL
Match: A0A6J1FQD3 (protein SRC1-like OS=Cucurbita moschata OX=3662 GN=LOC111447278 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 2.7e-23 Identity = 79/108 (73.15%), Postives = 88/108 (81.48%), Query Frame = 0
BLAST of ClCG10G015940 vs. ExPASy TrEMBL
Match: A0A6J1J3L9 (protein SRC1-like OS=Cucurbita maxima OX=3661 GN=LOC111482367 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 7.2e-21 Identity = 75/108 (69.44%), Postives = 81/108 (75.00%), Query Frame = 0
BLAST of ClCG10G015940 vs. ExPASy TrEMBL
Match: A0A6J1I7B7 (protein SRC1-like OS=Cucurbita maxima OX=3661 GN=LOC111471920 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 1.2e-20 Identity = 74/109 (67.89%), Postives = 82/109 (75.23%), Query Frame = 0
BLAST of ClCG10G015940 vs. TAIR 10
Match: AT1G54410.1 (dehydrin family protein ) HSP 1 Score: 69.3 bits (168), Expect = 2.1e-12 Identity = 57/115 (49.57%), Postives = 69/115 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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