ClCG10G000420 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGTTACAAGAAACTGGTTTAGAAGAGCTAGAAGGAAGCTGAGTGGAAAAGGCAATAGAAACACTGTTTTTTTGCAGACAAATGCCAGCCCAATTCATGATGAAGAACAAACCAATCTTACATTACCACAACAACAAGAAGATGAAGAAGATGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATTGATTATGATTCAATGACACCCAGATTTCAAAACAAAGTGTTGTCTGTAGAGGAAGTGGCAGCCATCAAAATCCAAGCTTGTTTCAGAGGCCATCTTGTATTATATCTAACCATCATATTACCCCCCCCCCCCCCCTTCTTTTTTCACTCTCTTTTTTCACTTTTTGCAACCCAAAATATTTCATCTCCCAATGATGGGATTTGAGTTTTGTGAGAGAGAGGCAAAGTACTTTTTGCCTGTTTGAAATAGTATTTCTCAATCATTTTCATGATTTTGGTTGGGTTTGATTATCAAGGATGGTTTTTAAAATAGTAAACTGCTTTTAGGAGAAGCACTTAGTTAGTAACTTCTTCTCAAATACTAGAATGAGTGATTTTTGTTTTAAAGAATTTGACTTATTCTAATACAATATATTCATTTTTTAGAACGGATGCATGTAAATGACTATTGAACGATGCTTACTTTGACTAGAACTAGAATTAAAAAATCTGGCAGACATCTTTTCAACTTCTTCAAATTTGATGCATGCCTTTTTAATTCTAGTTAGATGTTTGTTTGATTCATGACACTTTGTAAGAAAAGTATATGGTGAGCATTTGAATTCAAGTCTTTTACTAGATAACTAGAAGACTCTAAAGTGTTTATTAACAAATTGGAGTTAAAAAAAAAAAAAGAAAAAAGAATTCTTTATAGGTATTTTTTTGTTTTTTTTACACCAAGTAGTATTTTCAAATTGAATGATTGTCTCTCCTAAAGTAGAGTATATTTAATCCTTTGATATATCACCAACACCTATGCTTGTTGTTCAGGCAAGACGAGCATTTCAAGCACTAAGAAGCTTGGTGAAGCTGCAAGCGCTGGCTCGAGGGGTGTGCGCGAGGAGGCAGGCACGCATAGCTCTTCAGTTCATGCATGCATTGGTTCGTTTGCAGGTTCGGGTTCGTGCTCGCCAGCTTCTGAACGGATACGGTGAAGAGTCTGATTGTTGA ATGGAGGTTACAAGAAACTGGTTTAGAAGAGCTAGAAGGAAGCTGAGTGGAAAAGGCAATAGAAACACTGTTTTTTTGCAGACAAATGCCAGCCCAATTCATGATGAAGAACAAACCAATCTTACATTACCACAACAACAAGAAGATGAAGAAGATGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATTGATTATGATTCAATGACACCCAGATTTCAAAACAAAGTGTTGTCTGTAGAGGAAGTGGCAGCCATCAAAATCCAAGCTTGTTTCAGAGGCCATCTTGCAAGACGAGCATTTCAAGCACTAAGAAGCTTGGTGAAGCTGCAAGCGCTGGCTCGAGGGGTGTGCGCGAGGAGGCAGGCACGCATAGCTCTTCAGTTCATGCATGCATTGGTTCGTTTGCAGGTTCGGGTTCGTGCTCGCCAGCTTCTGAACGGATACGGTGAAGAGTCTGATTGTTGA ATGGAGGTTACAAGAAACTGGTTTAGAAGAGCTAGAAGGAAGCTGAGTGGAAAAGGCAATAGAAACACTGTTTTTTTGCAGACAAATGCCAGCCCAATTCATGATGAAGAACAAACCAATCTTACATTACCACAACAACAAGAAGATGAAGAAGATGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATTGATTATGATTCAATGACACCCAGATTTCAAAACAAAGTGTTGTCTGTAGAGGAAGTGGCAGCCATCAAAATCCAAGCTTGTTTCAGAGGCCATCTTGCAAGACGAGCATTTCAAGCACTAAGAAGCTTGGTGAAGCTGCAAGCGCTGGCTCGAGGGGTGTGCGCGAGGAGGCAGGCACGCATAGCTCTTCAGTTCATGCATGCATTGGTTCGTTTGCAGGTTCGGGTTCGTGCTCGCCAGCTTCTGAACGGATACGGTGAAGAGTCTGATTGTTGA MEVTRNWFRRARRKLSGKGNRNTVFLQTNASPIHDEEQTNLTLPQQQEDEEDEEEEEEEEEEEEEEIDYDSMTPRFQNKVLSVEEVAAIKIQACFRGHLARRAFQALRSLVKLQALARGVCARRQARIALQFMHALVRLQVRVRARQLLNGYGEESDC Homology
BLAST of ClCG10G000420 vs. NCBI nr
Match: XP_038904192.1 (protein IQ-DOMAIN 31 [Benincasa hispida]) HSP 1 Score: 242.3 bits (617), Expect = 2.9e-60 Identity = 140/159 (88.05%), Postives = 143/159 (89.94%), Query Frame = 0
BLAST of ClCG10G000420 vs. NCBI nr
Match: XP_004146164.2 (protein IQ-DOMAIN 1 [Cucumis sativus] >KGN55627.1 hypothetical protein Csa_009661 [Cucumis sativus]) HSP 1 Score: 238.4 bits (607), Expect = 4.1e-59 Identity = 139/158 (87.97%), Postives = 145/158 (91.77%), Query Frame = 0
BLAST of ClCG10G000420 vs. NCBI nr
Match: XP_022923472.1 (protein IQ-DOMAIN 31-like [Cucurbita moschata]) HSP 1 Score: 232.3 bits (591), Expect = 3.0e-57 Identity = 135/158 (85.44%), Postives = 143/158 (90.51%), Query Frame = 0
BLAST of ClCG10G000420 vs. NCBI nr
Match: KAG6577802.1 (Protein IQ-DOMAIN 20, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015841.1 Protein IQ-DOMAIN 31, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 229.2 bits (583), Expect = 2.5e-56 Identity = 133/157 (84.71%), Postives = 140/157 (89.17%), Query Frame = 0
BLAST of ClCG10G000420 vs. NCBI nr
Match: KAG7027812.1 (Protein IQ-DOMAIN 14, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 184.5 bits (467), Expect = 7.1e-43 Identity = 109/158 (68.99%), Postives = 119/158 (75.32%), Query Frame = 0
BLAST of ClCG10G000420 vs. ExPASy Swiss-Prot
Match: Q9SD11 (Protein IQ-DOMAIN 20 OS=Arabidopsis thaliana OX=3702 GN=IQD20 PE=1 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 2.3e-20 Identity = 55/67 (82.09%), Postives = 61/67 (91.04%), Query Frame = 0
BLAST of ClCG10G000420 vs. ExPASy Swiss-Prot
Match: Q9FT53 (Protein IQ-DOMAIN 3 OS=Arabidopsis thaliana OX=3702 GN=IQD3 PE=1 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.8e-12 Identity = 42/78 (53.85%), Postives = 55/78 (70.51%), Query Frame = 0
BLAST of ClCG10G000420 vs. ExPASy Swiss-Prot
Match: A0A1P8B590 (Protein IQ-DOMAIN 19 OS=Arabidopsis thaliana OX=3702 GN=IQD19 PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.6e-11 Identity = 37/66 (56.06%), Postives = 49/66 (74.24%), Query Frame = 0
BLAST of ClCG10G000420 vs. ExPASy Swiss-Prot
Match: O64852 (Protein IQ-DOMAIN 6 OS=Arabidopsis thaliana OX=3702 GN=IQD6 PE=1 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 4.4e-11 Identity = 39/65 (60.00%), Postives = 50/65 (76.92%), Query Frame = 0
BLAST of ClCG10G000420 vs. ExPASy Swiss-Prot
Match: Q9FIT1 (Protein IQ-DOMAIN 23 OS=Arabidopsis thaliana OX=3702 GN=IQD23 PE=1 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.2e-10 Identity = 39/79 (49.37%), Postives = 53/79 (67.09%), Query Frame = 0
BLAST of ClCG10G000420 vs. ExPASy TrEMBL
Match: A0A0A0L4V7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002470 PE=4 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 2.0e-59 Identity = 139/158 (87.97%), Postives = 145/158 (91.77%), Query Frame = 0
BLAST of ClCG10G000420 vs. ExPASy TrEMBL
Match: A0A6J1E674 (protein IQ-DOMAIN 31-like OS=Cucurbita moschata OX=3662 GN=LOC111431153 PE=4 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 1.4e-57 Identity = 135/158 (85.44%), Postives = 143/158 (90.51%), Query Frame = 0
BLAST of ClCG10G000420 vs. ExPASy TrEMBL
Match: A0A6J1H822 (protein IQ-DOMAIN 1 OS=Cucurbita moschata OX=3662 GN=LOC111460382 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 2.5e-41 Identity = 103/158 (65.19%), Postives = 115/158 (72.78%), Query Frame = 0
BLAST of ClCG10G000420 vs. ExPASy TrEMBL
Match: A0A6J1I877 (protein IQ-DOMAIN 1 OS=Cucurbita maxima OX=3661 GN=LOC111470076 PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 1.1e-38 Identity = 101/159 (63.52%), Postives = 111/159 (69.81%), Query Frame = 0
BLAST of ClCG10G000420 vs. ExPASy TrEMBL
Match: A0A5N5MQN1 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_007642 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 3.7e-21 Identity = 75/152 (49.34%), Postives = 94/152 (61.84%), Query Frame = 0
BLAST of ClCG10G000420 vs. TAIR 10
Match: AT3G51380.1 (IQ-domain 20 ) HSP 1 Score: 100.1 bits (248), Expect = 1.6e-21 Identity = 55/67 (82.09%), Postives = 61/67 (91.04%), Query Frame = 0
BLAST of ClCG10G000420 vs. TAIR 10
Match: AT3G52290.1 (IQ-domain 3 ) HSP 1 Score: 73.9 bits (180), Expect = 1.3e-13 Identity = 42/78 (53.85%), Postives = 55/78 (70.51%), Query Frame = 0
BLAST of ClCG10G000420 vs. TAIR 10
Match: AT4G14750.1 (IQ-domain 19 ) HSP 1 Score: 70.1 bits (170), Expect = 1.8e-12 Identity = 37/66 (56.06%), Postives = 49/66 (74.24%), Query Frame = 0
BLAST of ClCG10G000420 vs. TAIR 10
Match: AT2G26180.1 (IQ-domain 6 ) HSP 1 Score: 69.3 bits (168), Expect = 3.1e-12 Identity = 39/65 (60.00%), Postives = 50/65 (76.92%), Query Frame = 0
BLAST of ClCG10G000420 vs. TAIR 10
Match: AT5G62070.1 (IQ-domain 23 ) HSP 1 Score: 67.0 bits (162), Expect = 1.5e-11 Identity = 39/79 (49.37%), Postives = 53/79 (67.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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