ClCG09G018200 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTAACCCAAAACATATCGTCATGGCAATGAGAGATGAATTTCACTCTGATCCTTTTTAAACTTTGAAGCTAATTGTAACCTTAATATTAGTTGTCCTTAAAGTTCAATCAGCTGGCCATTAAATTGAACCTACAAAGCATTAGGTCTGATTTTAAGAGGTTGGTTTTCCCACATAATCAGAGGTTTTGGCTATAAATTTCAGTCCCCCAAACTAAACTTCATTATCTCATCTCTTTTGCCTTTAAAAATTTGAGTATCCAAATGAAGTTTCATCAGCAAACTGTCAAGAAAATCCATCCCAATTCTCCAACTCCAATGCTCATTCTCTTTCTCCTTTTCGAGCTTCTTTATATAACCATTTCATGTCAAGACATTGCATCACATAACTCTTCTCAGGTAATTAATCATACAAGTTTGTTTATTTTCCATATAAAGTTGATCAAATTGACCCCTCCCCTTTTGTTTACTTCTTCAGCTGCTTTCAGAAGGCGGTGGAGACTATGACTTCTTTTACCTTGTTCAACAGGTGATCAAATTTTTGTCTTTTCCCATTTGGGTTATATTATCATCTCTCTGCTTATTTCTATTTGGTAAGCATTAGTGGCAGATTTCTTTGTGCAATTTGAGGCCTTGTCAAAAACCAGCAAGACCCACATTCAGTATTTATGGCTTCTGGCCTTCTTCTTCTGGGGTTCCCAATTGCAAAAGTGGAACCATTTTTTATCCTTCAAAGGTATTTTTGCTGGACAGAGAGATAGATAGGGAGGGTTTGATGATTCAAATTCATTATGATGTTTTGTTTGTAAATGGCTTTTAATAGATTTTGGACCTGAAAAATGAGTTAGATAGAGAATGGCCATCTCTTGAGGTGGAGGAGAATGAGCAAATGTGGAAGAAAGAGTGGGAAAGGCATGGAATTTGTTCTGAGCCACTGCTTACTCAACATGCATTCTTTGAAACTGCACTCGAGCTTAAGCAAACTTTTGATCTCTTCGCTATCCTAGCAAACAGAGGTTTGTTTTTCAAGCTTTAAACAAAACTTTGATCTTCATTGAAAAATATTGCACTAGTCCTAAGGGAAATCAGAAATGGCTTTTAGCCGTAATACTTCTTTGTTCTTCAAGTTTTGAAAATTGTTTTTAAGTAGTCCTTGTACTAGTTTATTGTTAATATTTTGGACAAAAATGTGGTAAGTTAAGAGGTAGAATTGCTAAACTATTCAGAGATAATGGGAGGAGATAGGAAGGAAAAGAAAATGAAGGATTCACTAAACTTTGGAAAGAATACAAGCACATCGTCATGATGTGATAACAAATAGTAGGGCTAATAACTTTTCAAACATGTGTTCAATTAGATGACAAAGACAGGCGCAAAATAACAAGAAAGTATATCAAGAAAGAAAAAATAAAAAATAAAATAACTTTCACGTCACAACAATGATAAATTTGTGTGGAGGTGAAAGAACATGACTTGCAAAAAAAAAAGGAACCTGCACACTGGTGTGGTGCTACACACATTCTGATGCTTAACTCAAAGAGTAAAATATAGTGCGGAAGCTTTGGGATTTGAGAGACAAAATAGACTTACTCCTCCTTGAAGTTATAATGATGTATTTGTAGAAGTAGTTGACCTAAGTTATCCTCCATAAGGTTTCAAAGTCACATTAAGATCAACCTTAGGATCCTTAGGTACAGGCCCGCGAAGGGCATTGCCCTGTTTGACATTTTGCAAGGGTCGGCTTAGGTCGAGGCCGAGCATCTCCTCTAGGCCCATGGCCTAGAGTCATGCTTTGGGTTGGGGCATACCTCACTAAATACTTTGTTAGGTCAAGGCTGAACATGTTGGCTTGGGCCAAGGCTCAAGCCAACCCGCTCTCCTAGGCCTATTTTAGCCCTAGGATACTATTTTCGGTCCAAATTTTATTACTTTCTTAACTTTGTCGCTTCCTTTCTTATTTTGGTCTCAATTATATCTTTTGGTCTAAAATCACCCCATAACATTATGCATGAGCAATTATATCATCCTTTAGTTTATCATGTCATATCTACGACGGATCACTAATGATAAACATACTCAAAACACCACTAAAAATCATAGTCAAAAGTTGAAAAAAAAATTATCTACATAGACAAGACAGTACATTTCAAGACATAACTCAAACGAAGGTAACACAACAGTAGATTAAATGCTAAGAATCTCACTTTAACATACAGCATCCAATGTCATTAGGTGAATTAATAATTTCCTTTCAACTACTTGACTTCACTTTCTAGAAGCCATTACAATACTTGGCACTATGTTATCAGTTTTCTTAGGTTAATAATGTGGAGAAAGAAAAGTTTATGAAATAGTTGGAATGCAGGAATCTTTCCATTTGGAGAGGTGTATGGCTTAGATAACATAAGTGATGCCATTAGAGCTGCGACAGGACATACCCCACAAGTGGAATGCAAGTCATACAAACACATTCCTCTGCTCTCCAACATCTTCCTTTGCTTCCAATACACTGCAACTTCCATTCGTATTGTGGACTGCCCCATTATAAGAAGATGCAATTTCCAAGCAATCCTTTTCCCTTATGATCTATTTGGTCCATCTTAGAAACTGAAAATCCACTCTGTAATGGCTCCAGAAACAATCCCCATCTATTTAAGTTTCTCATATCAACTTTCTGGTGTTTTGTTAATGGCTATACAAGGAATTTGCACTATTCTAATTGTAGACCTCTGTTTTGATGTTTGTGTTAAATAATAAGTTGTTTGTTACTTATCAAAGATATTGACGACAATATATTTTTACGGTTATGTAGTGTTGAAATTACAAACTCGTTTTTTTTCTTTTTAA CTAACCCAAAACATATCGTCATGGCAATGAGAGATGAATTTCACTCTGATCCTTTTTAAACTTTGAAGCTAATTGTAACCTTAATATTAGTTGTCCTTAAAGTTCAATCAGCTGGCCATTAAATTGAACCTACAAAGCATTAGGTCTGATTTTAAGAGGTTGGTTTTCCCACATAATCAGAGGTTTTGGCTATAAATTTCAGTCCCCCAAACTAAACTTCATTATCTCATCTCTTTTGCCTTTAAAAATTTGAGTATCCAAATGAAGTTTCATCAGCAAACTGTCAAGAAAATCCATCCCAATTCTCCAACTCCAATGCTCATTCTCTTTCTCCTTTTCGAGCTTCTTTATATAACCATTTCATGTCAAGACATTGCATCACATAACTCTTCTCAGCTGCTTTCAGAAGGCGGTGGAGACTATGACTTCTTTTACCTTGTTCAACAGTGGCAGATTTCTTTGTGCAATTTGAGGCCTTGTCAAAAACCAGCAAGACCCACATTCAGTATTTATGGCTTCTGGCCTTCTTCTTCTGGGGTTCCCAATTGCAAAAGTGGAACCATTTTTTATCCTTCAAAGATTTTGGACCTGAAAAATGAGTTAGATAGAGAATGGCCATCTCTTGAGGTGGAGGAGAATGAGCAAATGTGGAAGAAAGAGTGGGAAAGGCATGGAATTTGTTCTGAGCCACTGCTTACTCAACATGCATTCTTTGAAACTGCACTCGAGCTTAAGCAAACTTTTGATCTCTTCGCTATCCTAGCAAACAGAGGAATCTTTCCATTTGGAGAGGTGTATGGCTTAGATAACATAAGTGATGCCATTAGAGCTGCGACAGGACATACCCCACAAGTGGAATGCAAGTCATACAAACACATTCCTCTGCTCTCCAACATCTTCCTTTGCTTCCAATACACTGCAACTTCCATTCGTATTGTGGACTGCCCCATTATAAGAAGATGCAATTTCCAAGCAATCCTTTTCCCTTATGATCTATTTGGTCCATCTTAGAAACTGAAAATCCACTCTGTAATGGCTCCAGAAACAATCCCCATCTATTTAAGTTTCTCATATCAACTTTCTGGTGTTTTGTTAATGGCTATACAAGGAATTTGCACTATTCTAATTGTAGACCTCTGTTTTGATGTTTGTGTTAAATAATAAGTTGTTTGTTACTTATCAAAGATATTGACGACAATATATTTTTACGGTTATGTAGTGTTGAAATTACAAACTCGTTTTTTTTCTTTTTAA ATGAAGTTTCATCAGCAAACTGTCAAGAAAATCCATCCCAATTCTCCAACTCCAATGCTCATTCTCTTTCTCCTTTTCGAGCTTCTTTATATAACCATTTCATGTCAAGACATTGCATCACATAACTCTTCTCAGCTGCTTTCAGAAGGCGGTGGAGACTATGACTTCTTTTACCTTGTTCAACAGTGGCAGATTTCTTTGTGCAATTTGAGGCCTTGTCAAAAACCAGCAAGACCCACATTCAGTATTTATGGCTTCTGGCCTTCTTCTTCTGGGGTTCCCAATTGCAAAAGTGGAACCATTTTTTATCCTTCAAAGATTTTGGACCTGAAAAATGAGTTAGATAGAGAATGGCCATCTCTTGAGGTGGAGGAGAATGAGCAAATGTGGAAGAAAGAGTGGGAAAGGCATGGAATTTGTTCTGAGCCACTGCTTACTCAACATGCATTCTTTGAAACTGCACTCGAGCTTAAGCAAACTTTTGATCTCTTCGCTATCCTAGCAAACAGAGGAATCTTTCCATTTGGAGAGGTGTATGGCTTAGATAACATAAGTGATGCCATTAGAGCTGCGACAGGACATACCCCACAAGTGGAATGCAAGTCATACAAACACATTCCTCTGCTCTCCAACATCTTCCTTTGCTTCCAATACACTGCAACTTCCATTCGTATTGTGGACTGCCCCATTATAAGAAGATGCAATTTCCAAGCAATCCTTTTCCCTTATGATCTATTTGGTCCATCTTAG MKFHQQTVKKIHPNSPTPMLILFLLFELLYITISCQDIASHNSSQLLSEGGGDYDFFYLVQQWQISLCNLRPCQKPARPTFSIYGFWPSSSGVPNCKSGTIFYPSKILDLKNELDREWPSLEVEENEQMWKKEWERHGICSEPLLTQHAFFETALELKQTFDLFAILANRGIFPFGEVYGLDNISDAIRAATGHTPQVECKSYKHIPLLSNIFLCFQYTATSIRIVDCPIIRRCNFQAILFPYDLFGPS Homology
BLAST of ClCG09G018200 vs. NCBI nr
Match: XP_038890875.1 (ribonuclease 3-like isoform X1 [Benincasa hispida]) HSP 1 Score: 483.4 bits (1243), Expect = 1.2e-132 Identity = 223/249 (89.56%), Postives = 238/249 (95.58%), Query Frame = 0
BLAST of ClCG09G018200 vs. NCBI nr
Match: XP_038890876.1 (ribonuclease 3-like isoform X2 [Benincasa hispida]) HSP 1 Score: 472.6 bits (1215), Expect = 2.1e-129 Identity = 221/249 (88.76%), Postives = 236/249 (94.78%), Query Frame = 0
BLAST of ClCG09G018200 vs. NCBI nr
Match: XP_004148699.1 (ribonuclease 1 isoform X1 [Cucumis sativus]) HSP 1 Score: 434.5 bits (1116), Expect = 6.2e-118 Identity = 203/249 (81.53%), Postives = 221/249 (88.76%), Query Frame = 0
BLAST of ClCG09G018200 vs. NCBI nr
Match: XP_011655995.1 (ribonuclease 1 isoform X2 [Cucumis sativus] >KAE8648923.1 hypothetical protein Csa_007813 [Cucumis sativus]) HSP 1 Score: 423.7 bits (1088), Expect = 1.1e-114 Identity = 201/249 (80.72%), Postives = 219/249 (87.95%), Query Frame = 0
BLAST of ClCG09G018200 vs. NCBI nr
Match: XP_008459317.1 (PREDICTED: ribonuclease 1-like isoform X1 [Cucumis melo]) HSP 1 Score: 423.3 bits (1087), Expect = 1.4e-114 Identity = 197/240 (82.08%), Postives = 216/240 (90.00%), Query Frame = 0
BLAST of ClCG09G018200 vs. ExPASy Swiss-Prot
Match: P80022 (Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2) HSP 1 Score: 131.7 bits (330), Expect = 1.1e-29 Identity = 75/220 (34.09%), Postives = 113/220 (51.36%), Query Frame = 0
BLAST of ClCG09G018200 vs. ExPASy Swiss-Prot
Match: P42815 (Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.1e-29 Identity = 76/204 (37.25%), Postives = 110/204 (53.92%), Query Frame = 0
BLAST of ClCG09G018200 vs. ExPASy Swiss-Prot
Match: P42813 (Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.5e-29 Identity = 71/194 (36.60%), Postives = 104/194 (53.61%), Query Frame = 0
BLAST of ClCG09G018200 vs. ExPASy Swiss-Prot
Match: P80196 (Intracellular ribonuclease LX OS=Solanum lycopersicum OX=4081 GN=RNALX PE=1 SV=2) HSP 1 Score: 123.6 bits (309), Expect = 3.1e-27 Identity = 70/190 (36.84%), Postives = 100/190 (52.63%), Query Frame = 0
BLAST of ClCG09G018200 vs. ExPASy Swiss-Prot
Match: Q7M438 (Ribonuclease DdI OS=Dictyostelium discoideum OX=44689 GN=ddiA PE=1 SV=3) HSP 1 Score: 112.1 bits (279), Expect = 9.3e-24 Identity = 72/216 (33.33%), Postives = 111/216 (51.39%), Query Frame = 0
BLAST of ClCG09G018200 vs. ExPASy TrEMBL
Match: A0A0A0KSB0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636550 PE=3 SV=1) HSP 1 Score: 434.5 bits (1116), Expect = 3.0e-118 Identity = 203/249 (81.53%), Postives = 221/249 (88.76%), Query Frame = 0
BLAST of ClCG09G018200 vs. ExPASy TrEMBL
Match: A0A1S3C9D7 (ribonuclease 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498487 PE=3 SV=1) HSP 1 Score: 423.3 bits (1087), Expect = 6.9e-115 Identity = 197/240 (82.08%), Postives = 216/240 (90.00%), Query Frame = 0
BLAST of ClCG09G018200 vs. ExPASy TrEMBL
Match: A0A6J1K331 (ribonuclease 1-like OS=Cucurbita maxima OX=3661 GN=LOC111489614 PE=3 SV=1) HSP 1 Score: 414.8 bits (1065), Expect = 2.5e-112 Identity = 197/243 (81.07%), Postives = 219/243 (90.12%), Query Frame = 0
BLAST of ClCG09G018200 vs. ExPASy TrEMBL
Match: A0A1S3C9W2 (ribonuclease 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498487 PE=3 SV=1) HSP 1 Score: 412.1 bits (1058), Expect = 1.6e-111 Identity = 195/240 (81.25%), Postives = 214/240 (89.17%), Query Frame = 0
BLAST of ClCG09G018200 vs. ExPASy TrEMBL
Match: A0A6J1C1D3 (ribonuclease 1-like OS=Momordica charantia OX=3673 GN=LOC111006533 PE=3 SV=1) HSP 1 Score: 405.2 bits (1040), Expect = 2.0e-109 Identity = 196/257 (76.26%), Postives = 216/257 (84.05%), Query Frame = 0
BLAST of ClCG09G018200 vs. TAIR 10
Match: AT1G14220.1 (Ribonuclease T2 family protein ) HSP 1 Score: 139.4 bits (350), Expect = 3.8e-33 Identity = 76/192 (39.58%), Postives = 107/192 (55.73%), Query Frame = 0
BLAST of ClCG09G018200 vs. TAIR 10
Match: AT1G26820.1 (ribonuclease 3 ) HSP 1 Score: 131.7 bits (330), Expect = 8.0e-31 Identity = 76/204 (37.25%), Postives = 110/204 (53.92%), Query Frame = 0
BLAST of ClCG09G018200 vs. TAIR 10
Match: AT2G02990.1 (ribonuclease 1 ) HSP 1 Score: 131.3 bits (329), Expect = 1.0e-30 Identity = 71/194 (36.60%), Postives = 104/194 (53.61%), Query Frame = 0
BLAST of ClCG09G018200 vs. TAIR 10
Match: AT1G14210.1 (Ribonuclease T2 family protein ) HSP 1 Score: 105.9 bits (263), Expect = 4.7e-23 Identity = 59/192 (30.73%), Postives = 92/192 (47.92%), Query Frame = 0
BLAST of ClCG09G018200 vs. TAIR 10
Match: AT2G39780.1 (ribonuclease 2 ) HSP 1 Score: 75.1 bits (183), Expect = 8.9e-14 Identity = 57/190 (30.00%), Postives = 84/190 (44.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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