ClCG09G016440 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTTCTTCTTCTTCTTCTTCTTCAATACAACTAGAATCTTTCCTTTCATAAAGTCCCATTCACACATCTCTCCTCTTTTTTCTTTTTCCAAAAACATTACCAAATAGTGATAAAAGGAAGAGAGAGGGATCCCACAAAACTAATTAATACACACAGAAAAAACAAACCTGAAAAATAACCATAGTTTCTTCAGCTAATTTCTCATTAAATACCCTGTTCTTCCTCTTCTTGTCTTCCCAATTAAGCTTTTGTGTTGGATTGAAGATATGAGTGATCCCAAATATGCCTATCCCTATCCACCTCCTCAAGGTTTTTTTTTTTTTTTTTTTGAGTTATGTTCAGGTTGACTTGTTTCTAATTAACTTTAGTTTGATTTAGTATTTTGGGTGCTGTGGAATTTATTTGCAGGAGGGTATTATCAAGGGCCGCCGGTGATGGCACCACCGCAATACGCTGCCCCGCCACCCAAAAGACAGCCGGGGTTCTTGGAGGGATGGTATGCCAAAAAGCTTGTTTTCTTTGTTGATAAACTCTGTGTGTTGAATGGTTTTGGTTTCATATATCAAAAGTGAAGGATGATGATTTGAAAAAATTAATATCTGTGTTGTTTTATCCATGTTAAAATACGATAGAAATTAATAGTTCATTATATATATATATATATATATATATATATAAAGAATAACGTGCGAGCATCGAGATGCTTCCAATAGACCATTCTACCGTTCGATTTGGCTTCTTCACGTTCTCCTTTCTCCAGCTTGAATCATATCTAAGTGACAAACATCCTTTCAAGTTTGAACTACACATTTGGTTTGCCTTTTCTGTTTGTTACTCTATGCCTAACAAAGGTTTTAAATTTGTGTTTGCATGCAGCCTTGCAGCTCTATGTTGTTGCTGTCTCCTTGATGAGTGTTGCTGTGACCCTTCAATTATCTTTGTTGCCTGATATCTGAGATATTGTTGCCTTTGTAGCTGTAATTACTTCTTTGTGAGTGGTTTGATTTTGTATAAACTTGGAAACAAGATTGATTGGTGTCTAGAATAAAGCTGTGTTTTCTTGTAAAGTACAGACTTTACTCATTTGATTTCATAGTAACTTTATTTGTCATTACCTAACCAATAAATTTAGTCAGTAAATTTTACCATGCGTGGTTATTTAGGTTTTAAACTTTGAATTCCCTTCTTCGAGAACTTTGGAAGCTAGTGAATGTCTTCTTTACTTCGATAGCGTGACGGTTCCTTGTCATGTCTCGAGGCTAAGGATATGTTGAGGATTCCACATTATAAAGATGAGA TCTTCTTCTTCTTCTTCTTCTTCAATACAACTAGAATCTTTCCTTTCATAAAGTCCCATTCACACATCTCTCCTCTTTTTTCTTTTTCCAAAAACATTACCAAATAGTGATAAAAGGAAGAGAGAGGGATCCCACAAAACTAATTAATACACACAGAAAAAACAAACCTGAAAAATAACCATAGTTTCTTCAGCTAATTTCTCATTAAATACCCTGTTCTTCCTCTTCTTGTCTTCCCAATTAAGCTTTTGTGTTGGATTGAAGATATGAGTGATCCCAAATATGCCTATCCCTATCCACCTCCTCAAGGAGGGTATTATCAAGGGCCGCCGGTGATGGCACCACCGCAATACGCTGCCCCGCCACCCAAAAGACAGCCGGGGTTCTTGGAGGGATGGTATGCCAAAAAGCTTGTTTTCTTTGTTGATAAACTCTCCTTGCAGCTCTATGTTGTTGCTGTCTCCTTGATGAGTGTTGCTGTGACCCTTCAATTATCTTTGTTGCCTGATATCTGAGATATTGTTGCCTTTGTAGCTGTAATTACTTCTTTGTGAGTGGTTTGATTTTGTATAAACTTGGAAACAAGATTGATTGGTGTCTAGAATAAAGCTGTGTTTTCTTGTAAAGTACAGACTTTACTCATTTGATTTCATAGTAACTTTATTTGTCATTACCTAACCAATAAATTTAGTCAGTAAATTTTACCATGCGTGGTTATTTAGGTTTTAAACTTTGAATTCCCTTCTTCGAGAACTTTGGAAGCTAGTGAATGTCTTCTTTACTTCGATAGCGTGACGGTTCCTTGTCATGTCTCGAGGCTAAGGATATGTTGAGGATTCCACATTATAAAGATGAGA ATGAGTGATCCCAAATATGCCTATCCCTATCCACCTCCTCAAGGAGGGTATTATCAAGGGCCGCCGGTGATGGCACCACCGCAATACGCTGCCCCGCCACCCAAAAGACAGCCGGGGTTCTTGGAGGGATGGTATGCCAAAAAGCTTGTTTTCTTTGTTGATAAACTCTCCTTGCAGCTCTATGTTGTTGCTGTCTCCTTGATGAGTGTTGCTGTGACCCTTCAATTATCTTTGTTGCCTGATATCTGA MSDPKYAYPYPPPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGWYAKKLVFFVDKLSLQLYVVAVSLMSVAVTLQLSLLPDI Homology
BLAST of ClCG09G016440 vs. NCBI nr
Match: KAA0031406.1 (cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa] >TYK06857.1 cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa]) HSP 1 Score: 114.0 bits (284), Expect = 6.1e-22 Identity = 64/88 (72.73%), Postives = 68/88 (77.27%), Query Frame = 0
BLAST of ClCG09G016440 vs. NCBI nr
Match: KGN43811.1 (hypothetical protein Csa_017361 [Cucumis sativus]) HSP 1 Score: 95.9 bits (237), Expect = 1.7e-16 Identity = 54/81 (66.67%), Postives = 57/81 (70.37%), Query Frame = 0
BLAST of ClCG09G016440 vs. NCBI nr
Match: KAG6571885.1 (hypothetical protein SDJN03_28613, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011569.1 hypothetical protein SDJN02_26475 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 93.2 bits (230), Expect = 1.1e-15 Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 0
BLAST of ClCG09G016440 vs. NCBI nr
Match: KAB1206726.1 (hypothetical protein CJ030_MR7G013527 [Morella rubra]) HSP 1 Score: 86.3 bits (212), Expect = 1.4e-13 Identity = 53/82 (64.63%), Postives = 58/82 (70.73%), Query Frame = 0
BLAST of ClCG09G016440 vs. NCBI nr
Match: KAF9609677.1 (hypothetical protein IFM89_017856 [Coptis chinensis]) HSP 1 Score: 84.0 bits (206), Expect = 6.8e-13 Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 0
BLAST of ClCG09G016440 vs. ExPASy TrEMBL
Match: A0A5A7SN04 (Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001610 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 3.0e-22 Identity = 64/88 (72.73%), Postives = 68/88 (77.27%), Query Frame = 0
BLAST of ClCG09G016440 vs. ExPASy TrEMBL
Match: A0A0A0K7L8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G069130 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 8.3e-17 Identity = 54/81 (66.67%), Postives = 57/81 (70.37%), Query Frame = 0
BLAST of ClCG09G016440 vs. ExPASy TrEMBL
Match: A0A6A1V3C6 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR7G013527 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 6.6e-14 Identity = 53/82 (64.63%), Postives = 58/82 (70.73%), Query Frame = 0
BLAST of ClCG09G016440 vs. ExPASy TrEMBL
Match: A0A314Y8T5 (CYSTM domain-containing protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_05607 PE=3 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.8e-12 Identity = 39/47 (82.98%), Postives = 41/47 (87.23%), Query Frame = 0
BLAST of ClCG09G016440 vs. ExPASy TrEMBL
Match: A0A6J5XT78 (CYSTM domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS39353 PE=3 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 6.2e-12 Identity = 38/47 (80.85%), Postives = 41/47 (87.23%), Query Frame = 0
BLAST of ClCG09G016440 vs. TAIR 10
Match: AT4G33660.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 51.6 bits (122), Expect = 3.5e-07 Identity = 33/56 (58.93%), Postives = 34/56 (60.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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