ClCG08G010570 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG08G010570
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Unknown protein
Location	CG_Chr08: 23268639 .. 23269013 (-)
RNA-Seq Expression	ClCG08G010570
Synteny	ClCG08G010570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCAAAGGGATTGCAACAAAACGCTCTCCAAAGGCAAAGCTTGGGAATGGAGGATTTTGGTGCAGCTGAGTTTCCAGGCTTTCAAACCACTGTTGCTCACAAAGACGACGTCGTTTACAAGAGGCCGTTGACTCGGTTGCAACGCCGTGCTCCTCACCCTCTCCCATTACCATGCCCCACCTCTTTTCCCTCGTGCGGTGGTGCATCAAAACAACCACCTGTTCACCACAACAACACTTCTTTTTCTTCGACGTCAAATGCATCTTTTCAATGTAGAGATCCGATCCCGTTACTTTCACCCCTTGTATGTCCATCGTTATTCGAATCTCGCTATGTCATAGAGCAAAATGTTACTAACAAGTTAGGTTGA

mRNA sequence

ATGGAAGCAAAGGGATTGCAACAAAACGCTCTCCAAAGGCAAAGCTTGGGAATGGAGGATTTTGGTGCAGCTGAGTTTCCAGGCTTTCAAACCACTGTTGCTCACAAAGACGACGTCGTTTACAAGAGGCCGTTGACTCGGTTGCAACGCCGTGCTCCTCACCCTCTCCCATTACCATGCCCCACCTCTTTTCCCTCGTGCGGTGGTGCATCAAAACAACCACCTGTTCACCACAACAACACTTCTTTTTCTTCGACGTCAAATGCATCTTTTCAATGTAGAGATCCGATCCCGTTACTTTCACCCCTTGTATGTCCATCGTTATTCGAATCTCGCTATGTCATAGAGCAAAATGTTACTAACAAGTTAGGTTGA

Coding sequence (CDS)

ATGGAAGCAAAGGGATTGCAACAAAACGCTCTCCAAAGGCAAAGCTTGGGAATGGAGGATTTTGGTGCAGCTGAGTTTCCAGGCTTTCAAACCACTGTTGCTCACAAAGACGACGTCGTTTACAAGAGGCCGTTGACTCGGTTGCAACGCCGTGCTCCTCACCCTCTCCCATTACCATGCCCCACCTCTTTTCCCTCGTGCGGTGGTGCATCAAAACAACCACCTGTTCACCACAACAACACTTCTTTTTCTTCGACGTCAAATGCATCTTTTCAATGTAGAGATCCGATCCCGTTACTTTCACCCCTTGTATGTCCATCGTTATTCGAATCTCGCTATGTCATAGAGCAAAATGTTACTAACAAGTTAGGTTGA

Protein sequence

MEAKGLQQNALQRQSLGMEDFGAAEFPGFQTTVAHKDDVVYKRPLTRLQRRAPHPLPLPCPTSFPSCGGASKQPPVHHNNTSFSSTSNASFQCRDPIPLLSPLVCPSLFESRYVIEQNVTNKLG

Homology

[Close]

BLAST of ClCG08G010570 vs. NCBI nr
Match: KAE8647257.1 (hypothetical protein Csa_018305, partial [Cucumis sativus])

HSP 1 Score: 164.9 bits (416), Expect = 4.6e-37
Identity = 94/129 (72.87%), Postives = 102/129 (79.07%), Query Frame = 0


Query: 1   MEAKGLQQNALQRQSLGMEDFG--AAEFPGFQTTVAHKDDVVYKRPLTRLQRRAPHPLPL 60
           MEAKG     ++   L MEDFG  AAEFPGFQT VAH+DD+VY+R LTRLQR APHPL L
Sbjct: 1   MEAKG--SKGIKAWEL-MEDFGADAAEFPGFQTNVAHRDDIVYRRSLTRLQRCAPHPLSL 60

Query: 61  PCPTSFPSCGGASKQPP--VHHNN--TSFSSTS-NASFQCRDPIPLLSPLVCPSLFESRY 120
           P PTSFPSCGGASKQPP  V +NN  +SFSSTS NASF C DPIPLLSPLVCPSLFES  
Sbjct: 61  PRPTSFPSCGGASKQPPPLVENNNNCSSFSSTSNNASFHCIDPIPLLSPLVCPSLFESHC 120

Query: 121 VIEQNVTNK 123
           VIE+NVT K
Sbjct: 121 VIEKNVTTK 126

[Close]

BLAST of ClCG08G010570 vs. NCBI nr
Match: KAB1206573.1 (hypothetical protein CJ030_MR7G020458 [Morella rubra] >KAB1206574.1 hypothetical protein CJ030_MR7G020459 [Morella rubra])

HSP 1 Score: 99.4 bits (246), Expect = 2.4e-17
Identity = 57/104 (54.81%), Postives = 70/104 (67.31%), Query Frame = 0


Query: 18  MEDFGAAEFPGFQTTVAHKDDVVYKRPLTRLQRRAPHPLPLPCPTSFPS-CGGASKQPPV 77
           ME+  +AEFPGFQT V HKDD VY+  L+RLQRRAP PL L  P++ PS C G  K    
Sbjct: 1   MEEGCSAEFPGFQTCV-HKDDFVYRSSLSRLQRRAPSPLQLIKPSTVPSACNGPPKTFVG 60

Query: 78  HHNNTSFSSTSNASFQCRDPIPLLSPLVCPSLFESRYVIEQNVT 121
             +++S SS+ N  +  +DPIPLLSPL  PSL ES YV E N+T
Sbjct: 61  SSSSSSSSSSMNPFYYSKDPIPLLSPLALPSLLESAYVQEGNIT 103

[Close]

BLAST of ClCG08G010570 vs. NCBI nr
Match: XP_042979927.1 (uncharacterized protein LOC122310107 [Carya illinoinensis] >KAG2706907.1 hypothetical protein I3760_05G123700 [Carya illinoinensis] >KAG6654100.1 hypothetical protein CIPAW_05G122300 [Carya illinoinensis] >KAG6712790.1 hypothetical protein I3842_05G119400 [Carya illinoinensis])

HSP 1 Score: 95.1 bits (235), Expect = 4.4e-16
Identity = 58/107 (54.21%), Postives = 71/107 (66.36%), Query Frame = 0


Query: 18  MEDFGAAEFPGFQTTVAHKDDVVYKRPLTRLQRRAPHPLPLPCPTSFPSCGGASKQPPVH 77
           ME+   AEFPGFQT   HKDD V+ R L+RLQRRAP PL L  P    +C GA+ +  V 
Sbjct: 1   MEESSTAEFPGFQT--FHKDDFVFGRSLSRLQRRAPSPLQLK-PKVPSACNGAAAKSFVG 60

Query: 78  HNNTSFSSTSNAS----FQCRDPIPLLSPLVCPSLFESRYVIEQNVT 121
            +N+S SS+S++S    +  +DPIPLLSPLV PSL ES YV E N T
Sbjct: 61  TSNSSSSSSSSSSLNSFYYSKDPIPLLSPLVSPSLLESAYVQEGNTT 104

[Close]

BLAST of ClCG08G010570 vs. NCBI nr
Match: EXB44891.1 (hypothetical protein L484_026473 [Morus notabilis])

HSP 1 Score: 94.4 bits (233), Expect = 7.6e-16
Identity = 55/105 (52.38%), Postives = 70/105 (66.67%), Query Frame = 0


Query: 18  MEDFGAAEFPGFQTTVAHKDDVVYKRPLTRLQRRAPHPLPLPCPT--SFPSCGGASKQPP 77
           ME+   +EFPGFQT  AHKDD+V KR L+RLQRRAP PL L  P     PS    +++P 
Sbjct: 1   MEESSYSEFPGFQTYNAHKDDIVLKRRLSRLQRRAPCPLQLVKPNHDHVPSSFHGTQKPL 60

Query: 78  VHHNNTSFSSTSNASFQCRDPIPLLSPLVCPSLFESRYVIEQNVT 121
               N S S+TS++  + +DPIPLLSPLV PSL ES  + ++NVT
Sbjct: 61  GSSLNPSPSTTSSSFDRSKDPIPLLSPLVLPSLLESACIQQENVT 105

[Close]

BLAST of ClCG08G010570 vs. NCBI nr
Match: PON64471.1 (hypothetical protein TorRG33x02_273200 [Trema orientale])

HSP 1 Score: 91.7 bits (226), Expect = 4.9e-15
Identity = 55/104 (52.88%), Postives = 68/104 (65.38%), Query Frame = 0


Query: 22  GAAEFPGFQTTVAHKDDVVYKRPLTRLQRRAPHPLPLPCPTSFPSCGGASKQPPVHHNNT 81
           GA +FPGFQ T AHKDD+V KR L+RLQRRAP PL L  P  + SC G  K       ++
Sbjct: 6   GADQFPGFQ-TYAHKDDIVLKRSLSRLQRRAPCPLQLK-PKVYSSCHGGVKSQGSCSKSS 65

Query: 82  SFSSTSNAS-----FQCRDPIPLLSPLVCPSLFESRYVIEQNVT 121
           S SSTS++S     +  +DPIPLLSPLV PSL ES  + ++N T
Sbjct: 66  SPSSTSSSSSLSSFYHSKDPIPLLSPLVLPSLLESACIQQENAT 107

[Close]

BLAST of ClCG08G010570 vs. ExPASy TrEMBL
Match: A0A0A0KDQ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G367140 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 2.2e-37
Identity = 94/129 (72.87%), Postives = 102/129 (79.07%), Query Frame = 0


Query: 1   MEAKGLQQNALQRQSLGMEDFG--AAEFPGFQTTVAHKDDVVYKRPLTRLQRRAPHPLPL 60
           MEAKG     ++   L MEDFG  AAEFPGFQT VAH+DD+VY+R LTRLQR APHPL L
Sbjct: 1   MEAKG--SKGIKAWEL-MEDFGADAAEFPGFQTNVAHRDDIVYRRSLTRLQRCAPHPLSL 60

Query: 61  PCPTSFPSCGGASKQPP--VHHNN--TSFSSTS-NASFQCRDPIPLLSPLVCPSLFESRY 120
           P PTSFPSCGGASKQPP  V +NN  +SFSSTS NASF C DPIPLLSPLVCPSLFES  
Sbjct: 61  PRPTSFPSCGGASKQPPPLVENNNNCSSFSSTSNNASFHCIDPIPLLSPLVCPSLFESHC 120

Query: 121 VIEQNVTNK 123
           VIE+NVT K
Sbjct: 121 VIEKNVTTK 126

[Close]

BLAST of ClCG08G010570 vs. ExPASy TrEMBL
Match: A0A6A1V1J8 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR7G020458 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.1e-17
Identity = 57/104 (54.81%), Postives = 70/104 (67.31%), Query Frame = 0


Query: 18  MEDFGAAEFPGFQTTVAHKDDVVYKRPLTRLQRRAPHPLPLPCPTSFPS-CGGASKQPPV 77
           ME+  +AEFPGFQT V HKDD VY+  L+RLQRRAP PL L  P++ PS C G  K    
Sbjct: 1   MEEGCSAEFPGFQTCV-HKDDFVYRSSLSRLQRRAPSPLQLIKPSTVPSACNGPPKTFVG 60

Query: 78  HHNNTSFSSTSNASFQCRDPIPLLSPLVCPSLFESRYVIEQNVT 121
             +++S SS+ N  +  +DPIPLLSPL  PSL ES YV E N+T
Sbjct: 61  SSSSSSSSSSMNPFYYSKDPIPLLSPLALPSLLESAYVQEGNIT 103

[Close]

BLAST of ClCG08G010570 vs. ExPASy TrEMBL
Match: W9QP10 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_026473 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 3.7e-16
Identity = 55/105 (52.38%), Postives = 70/105 (66.67%), Query Frame = 0


Query: 18  MEDFGAAEFPGFQTTVAHKDDVVYKRPLTRLQRRAPHPLPLPCPT--SFPSCGGASKQPP 77
           ME+   +EFPGFQT  AHKDD+V KR L+RLQRRAP PL L  P     PS    +++P 
Sbjct: 1   MEESSYSEFPGFQTYNAHKDDIVLKRRLSRLQRRAPCPLQLVKPNHDHVPSSFHGTQKPL 60

Query: 78  VHHNNTSFSSTSNASFQCRDPIPLLSPLVCPSLFESRYVIEQNVT 121
               N S S+TS++  + +DPIPLLSPLV PSL ES  + ++NVT
Sbjct: 61  GSSLNPSPSTTSSSFDRSKDPIPLLSPLVLPSLLESACIQQENVT 105

[Close]

BLAST of ClCG08G010570 vs. ExPASy TrEMBL
Match: A0A2P5CTY4 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_273200 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.4e-15
Identity = 55/104 (52.88%), Postives = 68/104 (65.38%), Query Frame = 0


Query: 22  GAAEFPGFQTTVAHKDDVVYKRPLTRLQRRAPHPLPLPCPTSFPSCGGASKQPPVHHNNT 81
           GA +FPGFQ T AHKDD+V KR L+RLQRRAP PL L  P  + SC G  K       ++
Sbjct: 6   GADQFPGFQ-TYAHKDDIVLKRSLSRLQRRAPCPLQLK-PKVYSSCHGGVKSQGSCSKSS 65

Query: 82  SFSSTSNAS-----FQCRDPIPLLSPLVCPSLFESRYVIEQNVT 121
           S SSTS++S     +  +DPIPLLSPLV PSL ES  + ++N T
Sbjct: 66  SPSSTSSSSSLSSFYHSKDPIPLLSPLVLPSLLESACIQQENAT 107

[Close]

BLAST of ClCG08G010570 vs. ExPASy TrEMBL
Match: A0A2I4H8F7 (uncharacterized protein LOC109014412 OS=Juglans regia OX=51240 GN=LOC109014412 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.4e-15
Identity = 59/108 (54.63%), Postives = 71/108 (65.74%), Query Frame = 0


Query: 18  MEDFGAAEFPGFQTTVAHKDDVVYKRPLTRLQRRAPHPLPLPCPTSFPSCGGASKQPPVH 77
           ME+   AEFPGFQT   HKDD V+ R L+RLQRRAP PL L  P    +C GA+ +  V 
Sbjct: 1   MEESSTAEFPGFQT--FHKDDFVFGRSLSRLQRRAPSPLQLK-PKVPSACNGAAAKSFVG 60

Query: 78  HNNTSFSSTSNAS-----FQCRDPIPLLSPLVCPSLFESRYVIEQNVT 121
            +N+S SSTS++S     +  +DPIPLLSPLV PSL ES YV E N T
Sbjct: 61  TSNSS-SSTSSSSLNSFYYSNKDPIPLLSPLVLPSLLESAYVQEGNTT 104

[Close]

BLAST of ClCG08G010570 vs. TAIR 10
Match: AT1G69050.1 (unknown protein; Has 9 Blast hits to 9 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 59.3 bits (142), Expect = 2.5e-09
Identity = 46/96 (47.92%), Postives = 53/96 (55.21%), Query Frame = 0


Query: 18  MEDFG--AAEFPGFQTTVAHKDDVVYKRPLT-RLQRRAPHPLPLPCPTSFPSCGGASKQP 77
           MED G     FPGF+  V H DD V++R L+ RLQRRAP PL LP P   PS    S   
Sbjct: 1   MEDSGRKGDPFPGFEMRV-HNDDCVFRRSLSCRLQRRAPCPLLLP-PRPPPSAEAPS--- 60

Query: 78  PVHHNNTSFSSTSNASFQCRDPIPLLSPLVCPSLFE 111
                 T+  STS       DPIPLLSPLV PS+ +
Sbjct: 61  -----TTTGVSTSTFCQNGTDPIPLLSPLVLPSMLQ 86

The following BLAST results are available for this feature:

BLAST of ClCG08G010570 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647257.1	4.6e-37	72.87	hypothetical protein Csa_018305, partial [Cucumis sativus]	[more]
KAB1206573.1	2.4e-17	54.81	hypothetical protein CJ030_MR7G020458 [Morella rubra] >KAB1206574.1 hypothetical...	[more]
XP_042979927.1	4.4e-16	54.21	uncharacterized protein LOC122310107 [Carya illinoinensis] >KAG2706907.1 hypothe...	[more]
EXB44891.1	7.6e-16	52.38	hypothetical protein L484_026473 [Morus notabilis]	[more]
PON64471.1	4.9e-15	52.88	hypothetical protein TorRG33x02_273200 [Trema orientale]	[more]

BLAST of ClCG08G010570 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG08G010570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDQ2	2.2e-37	72.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G367140 PE=4 SV=1	[more]
A0A6A1V1J8	1.1e-17	54.81	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR7G020458 PE=4 SV=1	[more]
W9QP10	3.7e-16	52.38	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_026473 PE=4 SV=1	[more]
A0A2P5CTY4	2.4e-15	52.88	Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_273200 PE=4 SV...	[more]
A0A2I4H8F7	2.4e-15	54.63	uncharacterized protein LOC109014412 OS=Juglans regia OX=51240 GN=LOC109014412 P...	[more]

BLAST of ClCG08G010570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69050.1	2.5e-09	47.92	unknown protein; Has 9 Blast hits to 9 proteins in 4 species: Archae - 0; Bacter...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG08G010570.1	ClCG08G010570.1	mRNA