ClCG08G004630 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCATGTGTTAATCAAGTGCCCACGAGCTCAGCTTATCTGGAGCAAAATTTATCAGTTGCCATCTATGGATGATGCCTACAACAACAATTTCGGAGAAAGGTGGTCAACGATCAACTCTTCTTGTCCAAAGGAAGAGCTCAATATTTTTGCAATTACATGTTGGTCCATCTGGAATGACAGAAACACCATCAATCAGGGGAAACCAGTTCCAATTTACACATCAGTAGAGTGGATACTAAAATACTACAACTCTTTTATTCACGCTTCGAAGGATGAGTACAGTGGTCGAAGTACCTTATCCCAAATTTCCCATTCAACTACCTAATGTTGGTCAAAGCCTCCTCCATGTTTCCTAAAACTGAATGTTGATGCAGCTTGGAAGGAAGACCTAACTTCAACAGGGCTGGGGGCGTCATTAAGAGATTCGAATGGCTTCCTCCTCGACGTTTTTGCCCAAGCTCTTGAACTGGACTTTGCCCCCCCCCCCCCCCCCCCCTCCGGCAGAGTTATTGGCTATTCGAGAAGCTCTTTAATGGGCTCTTCTCCAAAACTTTTCCAACTTAATCATCAAATCAAATTGTCTGCAGGCTATTAA ATGGATCATGTGTTAATCAAGTGCCCACGAGCTCAGCTTATCTGGAGCAAAATTTATCAGTTGCCATCTATGGATGATGCCTACAACAACAATTTCGGAGAAAGGTGGTCAACGATCAACTCTTCTTGTCCAAAGGAAGAGCTCAATATTTTTGCAATTACATGTTGGTCCATCTGGAATGACAGAAACACCATCAATCAGGGGAAACCAGTTCCAATTTACACATCAGTAGAGTGGATACTAAAATACTACAACTCTTTTATTCACGCTTCGAAGGATGAGTACAGTGGTCGAACTTGGAAGGAAGACCTAACTTCAACAGGGCTGGGGGCGTCATTAAGAGATTCGAATGGCTTCCTCCTCGACGTTTTTGCCCAAGCTCTTGAACTGGACTTTGCCCCCCCCCCCCCCCCCCCCTCCGGCAGAGTTATTGGCTATTCGAGAAGCTCTTTAATGGGCTCTTCTCCAAAACTTTTCCAACTTAATCATCAAATCAAATTGTCTGCAGGCTATTAA ATGGATCATGTGTTAATCAAGTGCCCACGAGCTCAGCTTATCTGGAGCAAAATTTATCAGTTGCCATCTATGGATGATGCCTACAACAACAATTTCGGAGAAAGGTGGTCAACGATCAACTCTTCTTGTCCAAAGGAAGAGCTCAATATTTTTGCAATTACATGTTGGTCCATCTGGAATGACAGAAACACCATCAATCAGGGGAAACCAGTTCCAATTTACACATCAGTAGAGTGGATACTAAAATACTACAACTCTTTTATTCACGCTTCGAAGGATGAGTACAGTGGTCGAACTTGGAAGGAAGACCTAACTTCAACAGGGCTGGGGGCGTCATTAAGAGATTCGAATGGCTTCCTCCTCGACGTTTTTGCCCAAGCTCTTGAACTGGACTTTGCCCCCCCCCCCCCCCCCCCCTCCGGCAGAGTTATTGGCTATTCGAGAAGCTCTTTAATGGGCTCTTCTCCAAAACTTTTCCAACTTAATCATCAAATCAAATTGTCTGCAGGCTATTAA MDHVLIKCPRAQLIWSKIYQLPSMDDAYNNNFGERWSTINSSCPKEELNIFAITCWSIWNDRNTINQGKPVPIYTSVEWILKYYNSFIHASKDEYSGRTWKEDLTSTGLGASLRDSNGFLLDVFAQALELDFAPPPPPPSGRVIGYSRSSLMGSSPKLFQLNHQIKLSAGY Homology
BLAST of ClCG08G004630 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia]) HSP 1 Score: 74.7 bits (182), Expect = 8.6e-10 Identity = 36/99 (36.36%), Postives = 53/99 (53.54%), Query Frame = 0
BLAST of ClCG08G004630 vs. NCBI nr
Match: XP_030508852.1 (uncharacterized protein LOC115723496 [Cannabis sativa]) HSP 1 Score: 54.7 bits (130), Expect = 9.2e-04 Identity = 30/119 (25.21%), Postives = 50/119 (42.02%), Query Frame = 0
BLAST of ClCG08G004630 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 4.2e-10 Identity = 36/99 (36.36%), Postives = 53/99 (53.54%), Query Frame = 0
BLAST of ClCG08G004630 vs. ExPASy TrEMBL
Match: A0A2N9HK89 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39966 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 4.0e-05 Identity = 22/68 (32.35%), Postives = 33/68 (48.53%), Query Frame = 0
BLAST of ClCG08G004630 vs. ExPASy TrEMBL
Match: A0A2N9GZG3 (Sodium/hydrogen exchanger OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS32805 PE=3 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 4.0e-05 Identity = 22/68 (32.35%), Postives = 33/68 (48.53%), Query Frame = 0
BLAST of ClCG08G004630 vs. ExPASy TrEMBL
Match: A0A2N9FQ02 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16921 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.2e-04 Identity = 24/69 (34.78%), Postives = 34/69 (49.28%), Query Frame = 0
BLAST of ClCG08G004630 vs. ExPASy TrEMBL
Match: A0A2N9EXU0 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7256 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 1.5e-04 Identity = 37/150 (24.67%), Postives = 58/150 (38.67%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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