ClCG07G009390 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCATCCCTTGGAGCTTCCTACGCCAAAATTCACCTCCTACAGAAACAACAGAAGGAGAAGCTTGAGAGAATGGAAGCGGATCGATTCTCCCGAGGAGAGGCCGGAACCACCACCAGCTCCACCAGCGGCGGTTCATTGCTTGCAAGGAATAACAAAGTTCACCCGGGAAGCATTGCTCCGGCGGCTGCCGACAGCTACAAAAACAGGACATGA ATGTCATCCCTTGGAGCTTCCTACGCCAAAATTCACCTCCTACAGAAACAACAGAAGGAGAAGCTTGAGAGAATGGAAGCGGATCGATTCTCCCGAGGAGAGGCCGGAACCACCACCAGCTCCACCAGCGGCGGTTCATTGCTTGCAAGGAATAACAAAGTTCACCCGGGAAGCATTGCTCCGGCGGCTGCCGACAGCTACAAAAACAGGACATGA ATGTCATCCCTTGGAGCTTCCTACGCCAAAATTCACCTCCTACAGAAACAACAGAAGGAGAAGCTTGAGAGAATGGAAGCGGATCGATTCTCCCGAGGAGAGGCCGGAACCACCACCAGCTCCACCAGCGGCGGTTCATTGCTTGCAAGGAATAACAAAGTTCACCCGGGAAGCATTGCTCCGGCGGCTGCCGACAGCTACAAAAACAGGACATGA MSSLGASYAKIHLLQKQQKEKLERMEADRFSRGEAGTTTSSTSGGSLLARNNKVHPGSIAPAAADSYKNRT Homology
BLAST of ClCG07G009390 vs. NCBI nr
Match: KAE8649159.1 (hypothetical protein Csa_014463, partial [Cucumis sativus]) HSP 1 Score: 111.3 bits (277), Expect = 3.4e-21 Identity = 60/72 (83.33%), Postives = 62/72 (86.11%), Query Frame = 0
BLAST of ClCG07G009390 vs. NCBI nr
Match: KAG6600624.1 (hypothetical protein SDJN03_05857, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 110.5 bits (275), Expect = 5.9e-21 Identity = 62/72 (86.11%), Postives = 65/72 (90.28%), Query Frame = 0
BLAST of ClCG07G009390 vs. NCBI nr
Match: KAG6577271.1 (hypothetical protein SDJN03_24845, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 102.1 bits (253), Expect = 2.1e-18 Identity = 57/71 (80.28%), Postives = 61/71 (85.92%), Query Frame = 0
BLAST of ClCG07G009390 vs. NCBI nr
Match: EOX92223.1 (Uncharacterized protein TCM_001203 [Theobroma cacao]) HSP 1 Score: 56.2 bits (134), Expect = 1.3e-04 Identity = 30/71 (42.25%), Postives = 47/71 (66.20%), Query Frame = 0
BLAST of ClCG07G009390 vs. NCBI nr
Match: PON54203.1 (hypothetical protein TorRG33x02_303210 [Trema orientale]) HSP 1 Score: 55.1 bits (131), Expect = 2.9e-04 Identity = 32/67 (47.76%), Postives = 43/67 (64.18%), Query Frame = 0
BLAST of ClCG07G009390 vs. ExPASy TrEMBL
Match: A0A2N9EUS9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6201 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.8e-05 Identity = 30/57 (52.63%), Postives = 43/57 (75.44%), Query Frame = 0
BLAST of ClCG07G009390 vs. ExPASy TrEMBL
Match: A0A061DQL6 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_001203 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 6.3e-05 Identity = 30/71 (42.25%), Postives = 47/71 (66.20%), Query Frame = 0
BLAST of ClCG07G009390 vs. ExPASy TrEMBL
Match: A0A2P5BZF9 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_303210 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.4e-04 Identity = 32/67 (47.76%), Postives = 43/67 (64.18%), Query Frame = 0
BLAST of ClCG07G009390 vs. ExPASy TrEMBL
Match: A0A2C9UXK4 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G139400 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.4e-04 Identity = 30/67 (44.78%), Postives = 43/67 (64.18%), Query Frame = 0
BLAST of ClCG07G009390 vs. ExPASy TrEMBL
Match: I1MYV6 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_18G020300 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 4.1e-04 Identity = 30/66 (45.45%), Postives = 43/66 (65.15%), Query Frame = 0
BLAST of ClCG07G009390 vs. TAIR 10
Match: AT4G39675.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 40.4 bits (93), Expect = 6.9e-04 Identity = 25/61 (40.98%), Postives = 40/61 (65.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|