ClCG06G017880 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG06G017880
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	MYND-type domain-containing protein
Location	CG_Chr06: 30962612 .. 30964317 (-)
RNA-Seq Expression	ClCG06G017880
Synteny	ClCG06G017880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTTTAATAGTTGGAAGGAAATAGAGGAGCAAAATGTAAAGTAGGTTTCTACGTTTCAAAATGTATTAAAAGCGAAATGAATAAATATTGTATTGTGATAGGAAGTGGAGGTCCCACCAGCAAGGCAATGAAGTGGTGGATGGATGTGTGTATAAAAACCGCCCCGTTGGAATTCGTCTTTACCGAACGCATAGGAAAATTAGTAATAAATAAATAGAACTATTTTATATTTTTTTATACATATATATAAAAAAAAGAAAAAGAGAACCAGAACGGTTACCATTTCCGATTTCCCATACCAGAGAGATACCAACACGCCGTCGCACGCCGCCGTACCACACTCCAAAATCTCAACTCTCGACGCATGTAATCACGAAACTCTTCAAGATGATTTGTGCCAAGAGGCCAAGAACATGCCGCAAATTCGCCGCAGAATCCGATCTCTTCGATGTCTTGCCGGACGATCTCCTTATACACCTCCTCTGCCGCCTCGCCTCCTCCGCCTCCTCCCCTTCCGACCTCCTCAATCTCCTCTTGACGTAATTACATGCTTTCTTTTTCTTGTTCTTTTTCTTTTTCCTCTGTTTTTTTGTTCTTTTTGTAAATTTCTCGTCGTTTTTCGGATGATTTTTGCAGATGTAAGAGGTTGAATCGCTTGGTTCTTCATCCTTTGGTTTTGTCTAACGCCGGACCGAAGGCGTTTGCAGTACGACCGAAAAAATGGTGTGATTCCGCTCACCGATTTCTCAAACGTTGCGTCGACGCTGGTAATTCGGAAGCGAGTTACACGCTCGGAATGGTTTGTTTTTTCCTTTTTTTGAAAGAGATGAAATTGTCACTCTGTATTGGAGTGGGGACGGGGATTGATGGCATCTCTGTAATTTTTCCCCTGTAGATCCGATTTTATTGCTTGAGGAATCGAGGGAGTGGAGCTTCTTTAATGGCGAAAGCCGCGATTAAATCTCACGCTCCGGCGCTATATTCCCTCGCCGTCATTCAATTTAACGGCAGCGGTGGCTCTAAGAGCGACAAGGATCTCCAGGCAGGCGTAGCGCTCTGTGCTCGAGCCGCTTTTCTCGGCCATGTGGACGCACTTCGCGAACTCGGTCACTGCCTTCAAGACGGTTACGGTGTGAGACAAAACTCCGACGAAGGCCGCCGTCTCCTCATCCAAGCCAACGCCCGTGAGCTTGCTGCGGTTCTACTCTCCTCCTCGAGTATATGGCAGCAACAGCGCCACCACCAGTTTGGCAACCTCCCTGATTTGACGGCGACGCGTTGTTCATTGCTGAGCGATTTTGGGTGTAACGTTCCGGCGCCGGAACCACATCCGGTGAACCTGTTTTTGAGAGAGTGGTTCGAGTCGGAAGGTGAAGTGGCGGCGCGTGGGGGTCTGAGACTTTGTTCGCACGGTGGATGTGGTCGGGCGGAGACTCGGCCGCACGAGTTCCGACGGTGTTCAGTTTGTGGCAGAGTAAATTACTGTTCAAGAGGATGCCAAGCGCAGGACTGGAAAGTCCGGCATAAAGAGGAGTGTACGGCCGTTCAGCGGTGGCGGGATGAGGCTGCTAACAATGCCGGCGGCATGTTTGATATTGTAGAAGAGGTTGAGGACGCCAACATCGTGGGTATTGTATAAAATCATAACAGCGCTGTAATTTGAGTTTATTTATGGATATAAATATATAGTTTTCGTAAACAA

mRNA sequence

ATGAGAAGTGGAGGTCCCACCAGCAAGGCAATGAAGTGGTGGATGGATGTGTGTATAAAAACCGCCCCGTTGGAATTCGTCTTTACCGAACGCATAGGAAAATTAAAAAAGAGAACCAGAACGGTTACCATTTCCGATTTCCCATACCAGAGAGATACCAACACGCCGTCGCACGCCGCCGTACCACACTCCAAAATCTCAACTCTCGACGCATGTAATCACGAAACTCTTCAAGATGATTTGTGCCAAGAGGCCAAGAACATGCCGCAAATTCGCCGCAGAATCCGATCTCTTCGATGTCTTGCCGGACGATCTCCTTATACACCTCCTCTGCCGCCTCGCCTCCTCCGCCTCCTCCCCTTCCGACCTCCTCAATCTCCTCTTGACAGGTTGAATCGCTTGGTTCTTCATCCTTTGGTTTTGTCTAACGCCGGACCGAAGGCGTTTGCAGTACGACCGAAAAAATGGTGTGATTCCGCTCACCGATTTCTCAAACGTTGCGTCGACGCTGGTAATTCGGAAGCGAGTTACACGCTCGGAATGATCCGATTTTATTGCTTGAGGAATCGAGGGAGTGGAGCTTCTTTAATGGCGAAAGCCGCGATTAAATCTCACGCTCCGGCGCTATATTCCCTCGCCGTCATTCAATTTAACGGCAGCGGTGGCTCTAAGAGCGACAAGGATCTCCAGGCAGGCGTAGCGCTCTGTGCTCGAGCCGCTTTTCTCGGCCATGTGGACGCACTTCGCGAACTCGGTCACTGCCTTCAAGACGGTTACGGTGTGAGACAAAACTCCGACGAAGGCCGCCGTCTCCTCATCCAAGCCAACGCCCGTGAGCTTGCTGCGGTTCTACTCTCCTCCTCGAGTATATGGCAGCAACAGCGCCACCACCAGTTTGGCAACCTCCCTGATTTGACGGCGACGCGTTGTTCATTGCTGAGCGATTTTGGGTGTAACGTTCCGGCGCCGGAACCACATCCGGTGAACCTGTTTTTGAGAGAGTGGTTCGAGTCGGAAGGTGAAGTGGCGGCGCGTGGGGGTCTGAGACTTTGTTCGCACGGTGGATGTGGTCGGGCGGAGACTCGGCCGCACGAGTTCCGACGGTGTTCAGTTTGTGGCAGAGTAAATTACTGTTCAAGAGGATGCCAAGCGCAGGACTGGAAAGTCCGGCATAAAGAGGAGTGTACGGCCGTTCAGCGGTGGCGGGATGAGGCTGCTAACAATGCCGGCGGCATGTTTGATATTGTAGAAGAGGTTGAGGACGCCAACATCGTGGGTATTGTATAAAATCATAACAGCGCTGTAATTTGAGTTTATTTATGGATATAAATATATAGTTTTCGTAAACAA

Coding sequence (CDS)

ATGAGAAGTGGAGGTCCCACCAGCAAGGCAATGAAGTGGTGGATGGATGTGTGTATAAAAACCGCCCCGTTGGAATTCGTCTTTACCGAACGCATAGGAAAATTAAAAAAGAGAACCAGAACGGTTACCATTTCCGATTTCCCATACCAGAGAGATACCAACACGCCGTCGCACGCCGCCGTACCACACTCCAAAATCTCAACTCTCGACGCATGTAATCACGAAACTCTTCAAGATGATTTGTGCCAAGAGGCCAAGAACATGCCGCAAATTCGCCGCAGAATCCGATCTCTTCGATGTCTTGCCGGACGATCTCCTTATACACCTCCTCTGCCGCCTCGCCTCCTCCGCCTCCTCCCCTTCCGACCTCCTCAATCTCCTCTTGACAGGTTGAATCGCTTGGTTCTTCATCCTTTGGTTTTGTCTAACGCCGGACCGAAGGCGTTTGCAGTACGACCGAAAAAATGGTGTGATTCCGCTCACCGATTTCTCAAACGTTGCGTCGACGCTGGTAATTCGGAAGCGAGTTACACGCTCGGAATGATCCGATTTTATTGCTTGAGGAATCGAGGGAGTGGAGCTTCTTTAATGGCGAAAGCCGCGATTAAATCTCACGCTCCGGCGCTATATTCCCTCGCCGTCATTCAATTTAACGGCAGCGGTGGCTCTAAGAGCGACAAGGATCTCCAGGCAGGCGTAGCGCTCTGTGCTCGAGCCGCTTTTCTCGGCCATGTGGACGCACTTCGCGAACTCGGTCACTGCCTTCAAGACGGTTACGGTGTGAGACAAAACTCCGACGAAGGCCGCCGTCTCCTCATCCAAGCCAACGCCCGTGAGCTTGCTGCGGTTCTACTCTCCTCCTCGAGTATATGGCAGCAACAGCGCCACCACCAGTTTGGCAACCTCCCTGATTTGACGGCGACGCGTTGTTCATTGCTGAGCGATTTTGGGTGTAACGTTCCGGCGCCGGAACCACATCCGGTGAACCTGTTTTTGAGAGAGTGGTTCGAGTCGGAAGGTGAAGTGGCGGCGCGTGGGGGTCTGAGACTTTGTTCGCACGGTGGATGTGGTCGGGCGGAGACTCGGCCGCACGAGTTCCGACGGTGTTCAGTTTGTGGCAGAGTAAATTACTGTTCAAGAGGATGCCAAGCGCAGGACTGGAAAGTCCGGCATAAAGAGGAGTGTACGGCCGTTCAGCGGTGGCGGGATGAGGCTGCTAACAATGCCGGCGGCATGTTTGATATTGTAGAAGAGGTTGAGGACGCCAACATCGTGGGTATTGTATAA

Protein sequence

MRSGGPTSKAMKWWMDVCIKTAPLEFVFTERIGKLKKRTRTVTISDFPYQRDTNTPSHAAVPHSKISTLDACNHETLQDDLCQEAKNMPQIRRRIRSLRCLAGRSPYTPPLPPRLLRLLPFRPPQSPLDRLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGMFDIVEEVEDANIVGIV

Homology

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BLAST of ClCG06G017880 vs. NCBI nr
Match: KAG6589385.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 592.8 bits (1527), Expect = 2.3e-165
Identity = 321/434 (73.96%), Postives = 338/434 (77.88%), Query Frame = 0


Query: 11  MKWWMDVCIKTAP-LEFVFTERIGK--LKKRTRTVTISDFPYQRDTNTPSHAAVPHSKIS 70
           MKWW+    K  P LEFVFTER  K  +KKR        FP      TP   AVPHS  S
Sbjct: 1   MKWWIGCVYKNRPSLEFVFTERTQKRIVKKREPNGYPFRFPVPEAYKTPPRTAVPHSINS 60

Query: 71  TLDACNHETLQDDLCQEAKNMPQIRRRIRSLRCLAGRSPYTPPLPPRLLRLLPFR---PP 130
           TL+ACN          +  NM   +R  R+ R  A  S     LP  LL  L  R     
Sbjct: 61  TLNACNR--------TQHCNMISAKRP-RTCRNFAAESDLFDVLPDDLLIHLLCRLASSA 120

Query: 131 QSPLD---------RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEA 190
            SP D         RLNRLVLHPLVLS AGPKAFAVR +KWCDSAHRFLKRCVDAGNSEA
Sbjct: 121 SSPSDLLNLLLTCKRLNRLVLHPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEA 180

Query: 191 SYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVAL 250
           SYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSK+DKDLQAGVAL
Sbjct: 181 SYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKNDKDLQAGVAL 240

Query: 251 CARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQR 310
           CARAAFLGHVDALRELGHCLQDGYGVR+NSDEGRRLLIQANARELAAVLLSSS + +QQR
Sbjct: 241 CARAAFLGHVDALRELGHCLQDGYGVRRNSDEGRRLLIQANARELAAVLLSSSRV-RQQR 300

Query: 311 HHQFGNLPDLTATRCSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHGG 370
           HHQFGNLPDLTATRCSLLSDFGC+ PA EPHPVNLFLREWFESE  VAAR GLRLCSHGG
Sbjct: 301 HHQFGNLPDLTATRCSLLSDFGCDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGG 360

Query: 371 CGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNA-GGMFD 429
           CGR ETRPHEFRRCS+CG VNYCSRGCQAQDWKVRHKEECTAVQRW+D   +NA GGMF+
Sbjct: 361 CGRPETRPHEFRRCSICGTVNYCSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFN 420

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BLAST of ClCG06G017880 vs. NCBI nr
Match: XP_008464430.1 (PREDICTED: F-box protein At1g67340-like [Cucumis melo] >TYJ98453.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 585.5 bits (1508), Expect = 3.7e-163
Identity = 285/300 (95.00%), Postives = 289/300 (96.33%), Query Frame = 0


Query: 130 RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRN 189
           RLNRLVLHPLVLS AGPKAFAVR + WCDS+HRFLKRCVDAGNSEASYTLGMIRFYCLRN
Sbjct: 54  RLNRLVLHPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRN 113

Query: 190 RGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALR 249
           RGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALR
Sbjct: 114 RGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALR 173

Query: 250 ELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDLTATR 309
           ELGHCLQDGYGVRQNSDEGRRLL+QANARELA VLLSSSSIWQQQRH+Q GNLPDLTATR
Sbjct: 174 ELGHCLQDGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATR 233

Query: 310 CSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRC 369
           CSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSH GCGRAETRPHEFRRC
Sbjct: 234 CSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRC 293

Query: 370 SVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGMFDIVEEVEDA-NIVGIV 429
           SVCG VNYCSRGCQAQDWKVRHKEECT VQRWRDE ANNAG MFDIVEEVEDA NIVGIV
Sbjct: 294 SVCGTVNYCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFDIVEEVEDANNIVGIV 353

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BLAST of ClCG06G017880 vs. NCBI nr
Match: KAA0057772.1 (F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 582.8 bits (1501), Expect = 2.4e-162
Identity = 284/300 (94.67%), Postives = 288/300 (96.00%), Query Frame = 0


Query: 130 RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRN 189
           RLNRLVLHPLVLS AGPKAFAVR + WCDS+HRFLKRCVDAGNSEASYTLGMIRFYCLRN
Sbjct: 54  RLNRLVLHPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRN 113

Query: 190 RGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALR 249
           RGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALR
Sbjct: 114 RGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALR 173

Query: 250 ELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDLTATR 309
           ELGHCLQDGYGVRQNSDEGRRLL+QANARELA VLLSSSSIWQQQRH+Q GNLPDLTATR
Sbjct: 174 ELGHCLQDGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATR 233

Query: 310 CSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRC 369
           CSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSH GCGRAETRPHEFRRC
Sbjct: 234 CSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRC 293

Query: 370 SVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGMFDIVEEVEDA-NIVGIV 429
           SVCG VNYCSRGCQAQDWKVRHKEECT VQRWRDE ANNA  MFDIVEEVEDA NIVGIV
Sbjct: 294 SVCGTVNYCSRGCQAQDWKVRHKEECTTVQRWRDEDANNADEMFDIVEEVEDANNIVGIV 353

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BLAST of ClCG06G017880 vs. NCBI nr
Match: XP_004138048.1 (F-box protein At1g67340 [Cucumis sativus] >KGN63483.1 hypothetical protein Csa_013606 [Cucumis sativus])

HSP 1 Score: 563.5 bits (1451), Expect = 1.5e-156
Identity = 278/301 (92.36%), Postives = 283/301 (94.02%), Query Frame = 0


Query: 130 RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRN 189
           RLNRLVL+P+VL  AGPKAFAVR + W DSAHRFLKRCVDAGNSEASYTLGMIRFYCLRN
Sbjct: 54  RLNRLVLNPMVLCKAGPKAFAVRMRNWSDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRN 113

Query: 190 RGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALR 249
           RGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALR
Sbjct: 114 RGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALR 173

Query: 250 ELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDLTATR 309
           ELGHCLQDGYGVRQNSDEGRRLL+QANARELA VLLSSSS WQQQRH+Q GNLPDLTATR
Sbjct: 174 ELGHCLQDGYGVRQNSDEGRRLLVQANARELATVLLSSSSTWQQQRHNQSGNLPDLTATR 233

Query: 310 CSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRC 369
           CSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAAR GLRLCSH GCGR ETRPHEFRRC
Sbjct: 234 CSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARVGLRLCSHSGCGRGETRPHEFRRC 293

Query: 370 SVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGMFDIV-EEVEDA-NIVGI 429
           SVCG VNYCSRGCQAQDWKVRHKEECT VQRWRDE ANNAG MF IV EEVEDA NIVGI
Sbjct: 294 SVCGTVNYCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFGIVEEEVEDANNIVGI 353

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BLAST of ClCG06G017880 vs. NCBI nr
Match: XP_022921747.1 (F-box protein At1g67340-like [Cucurbita moschata])

HSP 1 Score: 554.3 bits (1427), Expect = 9.2e-154
Identity = 286/349 (81.95%), Postives = 299/349 (85.67%), Query Frame = 0


Query: 93  RRIRSLRCLAGRSPYTPPLPPRLLRLLPFR---PPQSPLD---------RLNRLVLHPLV 152
           +R R+ R  A  S     LP  LL  L  R      SP D         RLNRLVLHPLV
Sbjct: 5   KRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNPLLTCKRLNRLVLHPLV 64

Query: 153 LSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKA 212
           LS AGPKAFAVR +KWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKA
Sbjct: 65  LSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKA 124

Query: 213 AIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYG 272
           AIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYG
Sbjct: 125 AIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYG 184

Query: 273 VRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNV 332
           VR+N+DEGRRLLIQANARELAAVLLSSS + +QQRHHQFGNLPDLTATRCSLLSDFGC+ 
Sbjct: 185 VRRNTDEGRRLLIQANARELAAVLLSSSRV-RQQRHHQFGNLPDLTATRCSLLSDFGCDF 244

Query: 333 PAPEPHPVNLFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSR 392
           PA EPHPVNLFLREWFESE  VAAR GLRLCSHGGCGR ETRPHEFRRCS+CG VNYCSR
Sbjct: 245 PATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNYCSR 304

Query: 393 GCQAQDWKVRHKEECTAVQRWRDEAANNA-GGMFDIVEEVEDANIVGIV 429
           GCQAQDWKVRHKEECTAVQRW+D   +NA GGMF+ VEEVEDAN+VG V
Sbjct: 305 GCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDANVVGTV 352

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BLAST of ClCG06G017880 vs. ExPASy Swiss-Prot
Match: Q9FYF9 (F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 8.5e-110
Identity = 195/286 (68.18%), Postives = 216/286 (75.52%), Query Frame = 0


Query: 130 RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRN 189
           RL  L ++P+VLS   PKA AV+   W + +HRFLKRCVDAG+ EA YTLGMIRFYCL+N
Sbjct: 78  RLKGLAMNPIVLSRLSPKAIAVKAHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQN 137

Query: 190 RGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALR 249
           RG+GASLMAKAAI SHAPALYSLAVIQFNGSGGSK+DKDL+AGVALCARAAFLGHVDALR
Sbjct: 138 RGNGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALR 197

Query: 250 ELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVL---LSSSSIWQQQRHHQFGNLPDLT 309
           ELGHCLQDGYGV QN  EGRR L+QANARELAAVL   + + S W          +P+  
Sbjct: 198 ELGHCLQDGYGVPQNVSEGRRFLVQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHG 257

Query: 310 ATRCSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEF 369
              C LLSDFGCNVPAPE HP N FL +WF   G      GLRLCSH GCGR ETR HEF
Sbjct: 258 QQTCPLLSDFGCNVPAPETHPANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEF 317

Query: 370 RRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGM 413
           RRCSVCG VNYCSR CQA DWK+RHK +C  VQRW +E     G +
Sbjct: 318 RRCSVCGVVNYCSRACQALDWKLRHKMDCAPVQRWLEEGDGGEGNV 363

[Close]

BLAST of ClCG06G017880 vs. ExPASy Swiss-Prot
Match: Q9FK27 (F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 1.0e-99
Identity = 189/296 (63.85%), Postives = 217/296 (73.31%), Query Frame = 0


Query: 126 SPLDRLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFY 185
           S   RLNRL LHPLVLS AG +  AV  +KW DS+H+FLK CV+AGN +ASY+LGMIRFY
Sbjct: 52  STCKRLNRLGLHPLVLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFY 111

Query: 186 CLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHV 245
           CL+N  SGASLMAKAAIKSHAPALYSL+VIQFNGSGGSK+DK+L+AGVALCAR+A+LGHV
Sbjct: 112 CLQNPVSGASLMAKAAIKSHAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHV 171

Query: 246 DALRELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDL 305
           DALRELGHCLQDGYGV ++  EGRRLLIQANARELA  L S  S+     +     L DL
Sbjct: 172 DALRELGHCLQDGYGVPRDVSEGRRLLIQANARELACSLRSYLSLKSGDENE---TLTDL 231

Query: 306 TATRCSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHE 365
           +             VP  E HPVN FL+EWF S G V    GLR+CSHGGCGR ETR HE
Sbjct: 232 SV------------VPVQEIHPVNRFLKEWF-SSGRVDLAEGLRMCSHGGCGRPETRAHE 291

Query: 366 FRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGMFDIVEEVED 422
           FRRCSVCG+VNYCSRGCQA DW+ +HK ECT +  W   AA        +  E++D
Sbjct: 292 FRRCSVCGKVNYCSRGCQALDWRAKHKVECTPLDLWVAAAAEIGDDGEAVAVEIDD 331

[Close]

BLAST of ClCG06G017880 vs. ExPASy Swiss-Prot
Match: Q09415 (SET domain-containing protein 14 OS=Caenorhabditis elegans OX=6239 GN=set-14 PE=4 SV=2)

HSP 1 Score: 50.1 bits (118), Expect = 7.4e-05
Identity = 23/54 (42.59%), Postives = 34/54 (62.96%), Query Frame = 0


Query: 356 CGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNA 410
           C +  T   E ++CS C R+ YCS+ CQ  DWK+ HK EC A+ +  +E AN++
Sbjct: 26  CNQCLTSMAELKKCSACRRLAYCSQECQRADWKL-HKVECKAI-KTHNEVANDS 77

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BLAST of ClCG06G017880 vs. ExPASy TrEMBL
Match: A0A5D3BGS7 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00550 PE=4 SV=1)

HSP 1 Score: 585.5 bits (1508), Expect = 1.8e-163
Identity = 285/300 (95.00%), Postives = 289/300 (96.33%), Query Frame = 0


Query: 130 RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRN 189
           RLNRLVLHPLVLS AGPKAFAVR + WCDS+HRFLKRCVDAGNSEASYTLGMIRFYCLRN
Sbjct: 54  RLNRLVLHPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRN 113

Query: 190 RGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALR 249
           RGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALR
Sbjct: 114 RGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALR 173

Query: 250 ELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDLTATR 309
           ELGHCLQDGYGVRQNSDEGRRLL+QANARELA VLLSSSSIWQQQRH+Q GNLPDLTATR
Sbjct: 174 ELGHCLQDGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATR 233

Query: 310 CSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRC 369
           CSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSH GCGRAETRPHEFRRC
Sbjct: 234 CSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRC 293

Query: 370 SVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGMFDIVEEVEDA-NIVGIV 429
           SVCG VNYCSRGCQAQDWKVRHKEECT VQRWRDE ANNAG MFDIVEEVEDA NIVGIV
Sbjct: 294 SVCGTVNYCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFDIVEEVEDANNIVGIV 353

[Close]

BLAST of ClCG06G017880 vs. ExPASy TrEMBL
Match: A0A1S3CLL0 (F-box protein At1g67340-like OS=Cucumis melo OX=3656 GN=LOC103502322 PE=4 SV=1)

HSP 1 Score: 585.5 bits (1508), Expect = 1.8e-163
Identity = 285/300 (95.00%), Postives = 289/300 (96.33%), Query Frame = 0


Query: 130 RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRN 189
           RLNRLVLHPLVLS AGPKAFAVR + WCDS+HRFLKRCVDAGNSEASYTLGMIRFYCLRN
Sbjct: 54  RLNRLVLHPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRN 113

Query: 190 RGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALR 249
           RGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALR
Sbjct: 114 RGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALR 173

Query: 250 ELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDLTATR 309
           ELGHCLQDGYGVRQNSDEGRRLL+QANARELA VLLSSSSIWQQQRH+Q GNLPDLTATR
Sbjct: 174 ELGHCLQDGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATR 233

Query: 310 CSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRC 369
           CSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSH GCGRAETRPHEFRRC
Sbjct: 234 CSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRC 293

Query: 370 SVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGMFDIVEEVEDA-NIVGIV 429
           SVCG VNYCSRGCQAQDWKVRHKEECT VQRWRDE ANNAG MFDIVEEVEDA NIVGIV
Sbjct: 294 SVCGTVNYCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFDIVEEVEDANNIVGIV 353

[Close]

BLAST of ClCG06G017880 vs. ExPASy TrEMBL
Match: A0A5A7UPI5 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00550 PE=4 SV=1)

HSP 1 Score: 582.8 bits (1501), Expect = 1.2e-162
Identity = 284/300 (94.67%), Postives = 288/300 (96.00%), Query Frame = 0


Query: 130 RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRN 189
           RLNRLVLHPLVLS AGPKAFAVR + WCDS+HRFLKRCVDAGNSEASYTLGMIRFYCLRN
Sbjct: 54  RLNRLVLHPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRN 113

Query: 190 RGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALR 249
           RGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALR
Sbjct: 114 RGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALR 173

Query: 250 ELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDLTATR 309
           ELGHCLQDGYGVRQNSDEGRRLL+QANARELA VLLSSSSIWQQQRH+Q GNLPDLTATR
Sbjct: 174 ELGHCLQDGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATR 233

Query: 310 CSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRC 369
           CSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSH GCGRAETRPHEFRRC
Sbjct: 234 CSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRC 293

Query: 370 SVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGMFDIVEEVEDA-NIVGIV 429
           SVCG VNYCSRGCQAQDWKVRHKEECT VQRWRDE ANNA  MFDIVEEVEDA NIVGIV
Sbjct: 294 SVCGTVNYCSRGCQAQDWKVRHKEECTTVQRWRDEDANNADEMFDIVEEVEDANNIVGIV 353

[Close]

BLAST of ClCG06G017880 vs. ExPASy TrEMBL
Match: A0A0A0LNX1 (MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G002030 PE=4 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 7.4e-157
Identity = 278/301 (92.36%), Postives = 283/301 (94.02%), Query Frame = 0


Query: 130 RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRN 189
           RLNRLVL+P+VL  AGPKAFAVR + W DSAHRFLKRCVDAGNSEASYTLGMIRFYCLRN
Sbjct: 54  RLNRLVLNPMVLCKAGPKAFAVRMRNWSDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRN 113

Query: 190 RGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALR 249
           RGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALR
Sbjct: 114 RGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALR 173

Query: 250 ELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDLTATR 309
           ELGHCLQDGYGVRQNSDEGRRLL+QANARELA VLLSSSS WQQQRH+Q GNLPDLTATR
Sbjct: 174 ELGHCLQDGYGVRQNSDEGRRLLVQANARELATVLLSSSSTWQQQRHNQSGNLPDLTATR 233

Query: 310 CSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRC 369
           CSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAAR GLRLCSH GCGR ETRPHEFRRC
Sbjct: 234 CSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARVGLRLCSHSGCGRGETRPHEFRRC 293

Query: 370 SVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGMFDIV-EEVEDA-NIVGI 429
           SVCG VNYCSRGCQAQDWKVRHKEECT VQRWRDE ANNAG MF IV EEVEDA NIVGI
Sbjct: 294 SVCGTVNYCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFGIVEEEVEDANNIVGI 353

[Close]

BLAST of ClCG06G017880 vs. ExPASy TrEMBL
Match: A0A6J1E1B7 (F-box protein At1g67340-like OS=Cucurbita moschata OX=3662 GN=LOC111429904 PE=4 SV=1)

HSP 1 Score: 554.3 bits (1427), Expect = 4.5e-154
Identity = 286/349 (81.95%), Postives = 299/349 (85.67%), Query Frame = 0


Query: 93  RRIRSLRCLAGRSPYTPPLPPRLLRLLPFR---PPQSPLD---------RLNRLVLHPLV 152
           +R R+ R  A  S     LP  LL  L  R      SP D         RLNRLVLHPLV
Sbjct: 5   KRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNPLLTCKRLNRLVLHPLV 64

Query: 153 LSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKA 212
           LS AGPKAFAVR +KWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKA
Sbjct: 65  LSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKA 124

Query: 213 AIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYG 272
           AIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYG
Sbjct: 125 AIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYG 184

Query: 273 VRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNV 332
           VR+N+DEGRRLLIQANARELAAVLLSSS + +QQRHHQFGNLPDLTATRCSLLSDFGC+ 
Sbjct: 185 VRRNTDEGRRLLIQANARELAAVLLSSSRV-RQQRHHQFGNLPDLTATRCSLLSDFGCDF 244

Query: 333 PAPEPHPVNLFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSR 392
           PA EPHPVNLFLREWFESE  VAAR GLRLCSHGGCGR ETRPHEFRRCS+CG VNYCSR
Sbjct: 245 PATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNYCSR 304

Query: 393 GCQAQDWKVRHKEECTAVQRWRDEAANNA-GGMFDIVEEVEDANIVGIV 429
           GCQAQDWKVRHKEECTAVQRW+D   +NA GGMF+ VEEVEDAN+VG V
Sbjct: 305 GCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDANVVGTV 352

[Close]

BLAST of ClCG06G017880 vs. TAIR 10
Match: AT1G67340.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 398.7 bits (1023), Expect = 6.0e-111
Identity = 195/286 (68.18%), Postives = 216/286 (75.52%), Query Frame = 0


Query: 130 RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRN 189
           RL  L ++P+VLS   PKA AV+   W + +HRFLKRCVDAG+ EA YTLGMIRFYCL+N
Sbjct: 78  RLKGLAMNPIVLSRLSPKAIAVKAHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQN 137

Query: 190 RGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALR 249
           RG+GASLMAKAAI SHAPALYSLAVIQFNGSGGSK+DKDL+AGVALCARAAFLGHVDALR
Sbjct: 138 RGNGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALR 197

Query: 250 ELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVL---LSSSSIWQQQRHHQFGNLPDLT 309
           ELGHCLQDGYGV QN  EGRR L+QANARELAAVL   + + S W          +P+  
Sbjct: 198 ELGHCLQDGYGVPQNVSEGRRFLVQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHG 257

Query: 310 ATRCSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEF 369
              C LLSDFGCNVPAPE HP N FL +WF   G      GLRLCSH GCGR ETR HEF
Sbjct: 258 QQTCPLLSDFGCNVPAPETHPANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEF 317

Query: 370 RRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGM 413
           RRCSVCG VNYCSR CQA DWK+RHK +C  VQRW +E     G +
Sbjct: 318 RRCSVCGVVNYCSRACQALDWKLRHKMDCAPVQRWLEEGDGGEGNV 363

[Close]

BLAST of ClCG06G017880 vs. TAIR 10
Match: AT5G50450.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 365.2 bits (936), Expect = 7.4e-101
Identity = 189/296 (63.85%), Postives = 217/296 (73.31%), Query Frame = 0


Query: 126 SPLDRLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFY 185
           S   RLNRL LHPLVLS AG +  AV  +KW DS+H+FLK CV+AGN +ASY+LGMIRFY
Sbjct: 52  STCKRLNRLGLHPLVLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFY 111

Query: 186 CLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHV 245
           CL+N  SGASLMAKAAIKSHAPALYSL+VIQFNGSGGSK+DK+L+AGVALCAR+A+LGHV
Sbjct: 112 CLQNPVSGASLMAKAAIKSHAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHV 171

Query: 246 DALRELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDL 305
           DALRELGHCLQDGYGV ++  EGRRLLIQANARELA  L S  S+     +     L DL
Sbjct: 172 DALRELGHCLQDGYGVPRDVSEGRRLLIQANARELACSLRSYLSLKSGDENE---TLTDL 231

Query: 306 TATRCSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHE 365
           +             VP  E HPVN FL+EWF S G V    GLR+CSHGGCGR ETR HE
Sbjct: 232 SV------------VPVQEIHPVNRFLKEWF-SSGRVDLAEGLRMCSHGGCGRPETRAHE 291

Query: 366 FRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGMFDIVEEVED 422
           FRRCSVCG+VNYCSRGCQA DW+ +HK ECT +  W   AA        +  E++D
Sbjct: 292 FRRCSVCGKVNYCSRGCQALDWRAKHKVECTPLDLWVAAAAEIGDDGEAVAVEIDD 331

[Close]

BLAST of ClCG06G017880 vs. TAIR 10
Match: AT2G24640.1 (ubiquitin-specific protease 19 )

HSP 1 Score: 43.9 bits (102), Expect = 3.8e-04
Identity = 19/40 (47.50%), Postives = 23/40 (57.50%), Query Frame = 0


Query: 356 CGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEEC 396
           CG+A T     ++CS C  V YCS  CQ  DWK  HK +C
Sbjct: 67  CGKATT-----KKCSRCKSVRYCSAACQTSDWKSGHKLKC 101

[Close]

BLAST of ClCG06G017880 vs. TAIR 10
Match: AT1G17110.1 (ubiquitin-specific protease 15 )

HSP 1 Score: 42.7 bits (99), Expect = 8.4e-04
Identity = 17/32 (53.12%), Postives = 20/32 (62.50%), Query Frame = 0


Query: 368 RCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQ 400
           RCS C  V YCS  CQ   W+V HK+EC  V+
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of ClCG06G017880 vs. TAIR 10
Match: AT1G17110.2 (ubiquitin-specific protease 15 )

HSP 1 Score: 42.7 bits (99), Expect = 8.4e-04
Identity = 17/32 (53.12%), Postives = 20/32 (62.50%), Query Frame = 0


Query: 368 RCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQ 400
           RCS C  V YCS  CQ   W+V HK+EC  V+
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

The following BLAST results are available for this feature:

BLAST of ClCG06G017880 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589385.1	2.3e-165	73.96	F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_008464430.1	3.7e-163	95.00	PREDICTED: F-box protein At1g67340-like [Cucumis melo] >TYJ98453.1 F-box protein...	[more]
KAA0057772.1	2.4e-162	94.67	F-box protein [Cucumis melo var. makuwa]	[more]
XP_004138048.1	1.5e-156	92.36	F-box protein At1g67340 [Cucumis sativus] >KGN63483.1 hypothetical protein Csa_0...	[more]
XP_022921747.1	9.2e-154	81.95	F-box protein At1g67340-like [Cucurbita moschata]	[more]

BLAST of ClCG06G017880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYF9	8.5e-110	68.18	F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1	[more]
Q9FK27	1.0e-99	63.85	F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1	[more]
Q09415	7.4e-05	42.59	SET domain-containing protein 14 OS=Caenorhabditis elegans OX=6239 GN=set-14 PE=...	[more]

BLAST of ClCG06G017880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BGS7	1.8e-163	95.00	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00550 ...	[more]
A0A1S3CLL0	1.8e-163	95.00	F-box protein At1g67340-like OS=Cucumis melo OX=3656 GN=LOC103502322 PE=4 SV=1	[more]
A0A5A7UPI5	1.2e-162	94.67	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00550 ...	[more]
A0A0A0LNX1	7.4e-157	92.36	MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G002030 P...	[more]
A0A6J1E1B7	4.5e-154	81.95	F-box protein At1g67340-like OS=Cucurbita moschata OX=3662 GN=LOC111429904 PE=4 ...	[more]

BLAST of ClCG06G017880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67340.1	6.0e-111	68.18	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT5G50450.1	7.4e-101	63.85	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT2G24640.1	3.8e-04	47.50	ubiquitin-specific protease 19	[more]
AT1G17110.1	8.4e-04	53.13	ubiquitin-specific protease 15	[more]
AT1G17110.2	8.4e-04	53.13	ubiquitin-specific protease 15	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	6.10.140.2220		coord: 334..401 e-value: 8.8E-11 score: 43.3
None	No IPR available	PANTHER	PTHR46758:SF9	HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN	coord: 130..418
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 153..276
None	No IPR available	SUPERFAMILY	144232	HIT/MYND zinc finger-like	coord: 351..400
IPR002893	Zinc finger, MYND-type	PFAM	PF01753	zf-MYND	coord: 356..395 e-value: 1.7E-7 score: 31.2
IPR002893	Zinc finger, MYND-type	PROSITE	PS50865	ZF_MYND_2	coord: 353..395 score: 11.205131
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 150..298 e-value: 8.8E-18 score: 66.8
IPR044508	F-box protein At5g50450/At1g67340-like	PANTHER	PTHR46758	MYND DOMAIN-CONTAINING	coord: 130..418

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G017880.2	ClCG06G017880.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding