ClCG05G022830 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCTTCTCCCTTTTCCCAACCACTTATAATAATCCATCCCTCTTTCTTCACAAACCCATACATAAAATCTTCCTTTCCCTTCTTCACGATCCCCTGTTTCATTGGCGGAGCATGGCGGTGGCCGGAATCGGAGTTCGGAAGCAAAAAATTTTTCCTCATGCTTCTAGCCTTGCTTCCATGGAGTCCTTATCTCTGCCTCTTGTCTCTGCTTTTTTCTTTCTATCTCTTGCATTTGTCTTTGTGGCTGCAATTTAATGGCTGATGATGCTCCTTCTTGATTTTTCCAGGTTCAGGAAATTGTATTAACAGCTGATATTCGATGTGCTGAATGTCAGAAGAAACTGGCAAATATACTCTCCAAAATGAATGGTGAGTTTGTACTGTATTTTTTGGGGAATTTCGTTCCATCTTTTAATTTTGCTTCTGTTCATGTATAGAATTTGGTCTTCTACCTCTGTTTTGTTTGATTTGATAATCATTTAGGCAGGTTTAGATTGGGAGGAGAGAGGAGAGAAGTAAAGTACAAATAAATATTAAAAGTTGTTTTTTGGAAAAATTAGATTTAGGCATGTTTGCTAGTTTAGATGTTAGTACCTAATGTTGAAATTTATAATTAAAAGTTTATGGGTATAGCATAAATTTTAATAGCAAAAAACAAAAATCCAAAAAAAAAAATTTCAAACACCAAATGGGACTTTTTTTTTTTTTTTAATAGAAAATTAAGTTGGTAGACATTGCTTTGAGTTTATTTATTTCGATATCTACTCGTTGGGTATTTAAAAAAAGAAAAAAGAAAAAAGAAAAAAAAATTTTTAATAAGGCTTTTTTAATAACAATTTCATTTTATTAAATTAACTTAAATGACAAGACAAAATCTCACCGATAAAAGTAGAATTTATAAACATAATTGTCTAAAGCTTCATCTTTTTTTCTTTTTTAAAAAAATATTGACCATAGATTCAAAATTCTATTTAGAAAGATGAAGCTTTCAAGAAGCAAATAAACCATTTTAAAAAACTAAATGGTTATCATATAATTCAAGCATCAATAATTTGGTGGTTTTTGTGCGGTACAGATACAGAGTCTGTGGTGGTGAATTTGTTGGACAAGAAAGTGATATTGACTCGAAGATTACAGGTTCCATCCAGAGTTTCAACAATCAAGAGATTGTTTGGTTATTCTTGCAAATAATTATAAAATATATAATGAAATATTTTTTTAGTCATGTTGTAGATAGATAAATGATCCCACTACTTGATCTTTAGCTT CCCTTCTCCCTTTTCCCAACCACTTATAATAATCCATCCCTCTTTCTTCACAAACCCATACATAAAATCTTCCTTTCCCTTCTTCACGATCCCCTGTTTCATTGGCGGAGCATGGCGGTGGCCGGAATCGGAGTTCGGAAGCAAAAAATTTTTCCTCATGCTTCTAGCCTTGCTTCCATGGAGTCCTTATCTCTGCCTCTTGTTCAGGAAATTGTATTAACAGCTGATATTCGATGTGCTGAATGTCAGAAGAAACTGGCAAATATACTCTCCAAAATGAATGATACAGAGTCTGTGGTGGTGAATTTGTTGGACAAGAAAGTGATATTGACTCGAAGATTACAGGTTCCATCCAGAGTTTCAACAATCAAGAGATTGTTTGGTTATTCTTGCAAATAATTATAAAATATATAATGAAATATTTTTTTAGTCATGTTGTAGATAGATAAATGATCCCACTACTTGATCTTTAGCTT ATGGCGGTGGCCGGAATCGGAGTTCGGAAGCAAAAAATTTTTCCTCATGCTTCTAGCCTTGCTTCCATGGAGTCCTTATCTCTGCCTCTTGTTCAGGAAATTGTATTAACAGCTGATATTCGATGTGCTGAATGTCAGAAGAAACTGGCAAATATACTCTCCAAAATGAATGATACAGAGTCTGTGGTGGTGAATTTGTTGGACAAGAAAGTGATATTGACTCGAAGATTACAGGTTCCATCCAGAGTTTCAACAATCAAGAGATTGTTTGGTTATTCTTGCAAATAA MAVAGIGVRKQKIFPHASSLASMESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQVPSRVSTIKRLFGYSCK Homology
BLAST of ClCG05G022830 vs. NCBI nr
Match: XP_038892707.1 (uncharacterized protein LOC120081691 [Benincasa hispida]) HSP 1 Score: 161.4 bits (407), Expect = 3.9e-36 Identity = 84/94 (89.36%), Postives = 89/94 (94.68%), Query Frame = 0
BLAST of ClCG05G022830 vs. NCBI nr
Match: KGN52069.1 (hypothetical protein Csa_009028 [Cucumis sativus]) HSP 1 Score: 154.5 bits (389), Expect = 4.7e-34 Identity = 80/93 (86.02%), Postives = 87/93 (93.55%), Query Frame = 0
BLAST of ClCG05G022830 vs. NCBI nr
Match: XP_022968296.1 (uncharacterized protein LOC111467567 isoform X3 [Cucurbita maxima]) HSP 1 Score: 150.6 bits (379), Expect = 6.8e-33 Identity = 82/93 (88.17%), Postives = 86/93 (92.47%), Query Frame = 0
BLAST of ClCG05G022830 vs. NCBI nr
Match: KAG7013033.1 (hypothetical protein SDJN02_25789 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 147.9 bits (372), Expect = 4.4e-32 Identity = 81/93 (87.10%), Postives = 85/93 (91.40%), Query Frame = 0
BLAST of ClCG05G022830 vs. NCBI nr
Match: XP_023542320.1 (uncharacterized protein LOC111802252 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 147.9 bits (372), Expect = 4.4e-32 Identity = 81/93 (87.10%), Postives = 85/93 (91.40%), Query Frame = 0
BLAST of ClCG05G022830 vs. ExPASy TrEMBL
Match: A0A0A0KT62 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608570 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 2.3e-34 Identity = 80/93 (86.02%), Postives = 87/93 (93.55%), Query Frame = 0
BLAST of ClCG05G022830 vs. ExPASy TrEMBL
Match: A0A6J1HUG9 (uncharacterized protein LOC111467567 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111467567 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 3.3e-33 Identity = 82/93 (88.17%), Postives = 86/93 (92.47%), Query Frame = 0
BLAST of ClCG05G022830 vs. ExPASy TrEMBL
Match: A0A6J1G188 (uncharacterized protein LOC111449743 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111449743 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.8e-31 Identity = 80/93 (86.02%), Postives = 84/93 (90.32%), Query Frame = 0
BLAST of ClCG05G022830 vs. ExPASy TrEMBL
Match: A0A6J1DB71 (uncharacterized protein LOC111018707 OS=Momordica charantia OX=3673 GN=LOC111018707 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 7.6e-30 Identity = 78/97 (80.41%), Postives = 84/97 (86.60%), Query Frame = 0
BLAST of ClCG05G022830 vs. ExPASy TrEMBL
Match: A0A6J1G176 (uncharacterized protein LOC111449743 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449743 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 4.6e-27 Identity = 80/120 (66.67%), Postives = 84/120 (70.00%), Query Frame = 0
BLAST of ClCG05G022830 vs. TAIR 10
Match: AT1G68585.1 (unknown protein; Has 23 Blast hits to 23 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 73.9 bits (180), Expect = 7.6e-14 Identity = 42/84 (50.00%), Postives = 65/84 (77.38%), Query Frame = 0
BLAST of ClCG05G022830 vs. TAIR 10
Match: AT2G35730.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 43.5 bits (101), Expect = 1.1e-04 Identity = 27/67 (40.30%), Postives = 39/67 (58.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|