ClCG05G020510 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG05G020510
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	LOB domain-containing protein
Location	CG_Chr05: 32586418 .. 32587667 (-)
RNA-Seq Expression	ClCG05G020510
Synteny	ClCG05G020510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAAGTCGCTTGACAACTTCACAAAAATGGTATAGTTTGGAGTGTAGTAAGTGTGTATATATATTTCAATGTTTTATATTTTTTCCTATTTAAATTCGTGTACATGGAAGTTTGGTGTATAAAACGATATCTAAAAATGCAGGTCATTAATAGGTGTATTTTTTATGAAAAGAGGGAAAATAAAAAAACTATCTTTTTATGATATGTATTGAACAATGAAAAATACTTAAGTGTAGCTTAAGCTACAATTATTTATTGTGTACGTCATATTGCACCCAATTAAAATATTAAATTTACGTGCAATTTATACCACACTTAAATATTTGTTTTTTACAAGATACTCGGAAGGTGAAGACATTGGGATTATAAATACCAAACGAATAGAAACAAATACATTGAAGTCGGTTCATATTGACTACGATGACAAGGATTTTGATTCCATTTTTCAGAGCACTAAAAATGAAATTTGGATTCTTAATTTAAAAAATGAACTATACCATTGATTTTGTTAAGAGATAAAAATAATTTAAATTGTCTATTCCACCAGAACAAAAAATAAAAGTAATTAGAAACTGGTCTAAAATTGTGTTTCTGTTTTAAAAACATCAATATATTCAAATTCAAAGCTACAAAATTTAACTTCTGACCTAAAGCCATTTATTTATTTTCCCCGAGGAAGAAATGCTATTTATTAAAGCGAAATTGCTAATGTCTTGCCAATGATACTCAAATCTAAATTGTCTATTGACTAAATGATTTTAATTAGATTATTATTCNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAGCTCTGTTTCAGTCTCTGTTATTCGAAGCTTGTGGTCGCACCGTTAACCCAGTTAGCGGAGCCGTTGGTCTCTTGTACAGTGGGAACTGGCACGTTTGTCAAGCGGCGGCGGATACCGTTCTCAACGGCGGAGTTCTCCGCCCGATACCCGGAATTGAAAGTTCTGGAAATCCCATCCCCAACGTCGATGATTCCGCACTTACTTTCAATACCGATGTCTGGACAACCACCACACACAATCTTCAATTTTACCCATCTACTCCGTCCGATTTCCGGTGCCTTCCGGATCTCGCTCTAGGCAGAGCGAAGAATCATCCATTGGAGAATCGGCGGTCTCTTGATTCCGAAGAGTCGGTCATGACCAGCTTCGGAAGCGGCGATCTCGGCGACCAACGGAAAGAGACGAAGCTTTTAAACTTATTCGTCTGA

mRNA sequence

ATGATAAGTCGCTTGACAACTTCACAAAAATGGTATAGTTTGGAGTGTACTCTGTTTCAGTCTCTGTTATTCGAAGCTTGTGGTCGCACCGTTAACCCAGTTAGCGGAGCCGTTGGTCTCTTGTACAGTGGGAACTGGCACGTTTGTCAAGCGGCGGCGGATACCGTTCTCAACGGCGGAGTTCTCCGCCCGATACCCGGAATTGAAAGTTCTGGAAATCCCATCCCCAACGTCGATGATTCCGCACTTACTTTCAATACCGATGTCTGGACAACCACCACACACAATCTTCAATTTTACCCATCTACTCCGTCCGATTTCCGGTGCCTTCCGGATCTCGCTCTAGGCAGAGCGAAGAATCATCCATTGGAGAATCGGCGGTCTCTTGATTCCGAAGAGTCGGTCATGACCAGCTTCGGAAGCGGCGATCTCGGCGACCAACGGAAAGAGACGAAGCTTTTAAACTTATTCGTCTGA

Coding sequence (CDS)

ATGATAAGTCGCTTGACAACTTCACAAAAATGGTATAGTTTGGAGTGTACTCTGTTTCAGTCTCTGTTATTCGAAGCTTGTGGTCGCACCGTTAACCCAGTTAGCGGAGCCGTTGGTCTCTTGTACAGTGGGAACTGGCACGTTTGTCAAGCGGCGGCGGATACCGTTCTCAACGGCGGAGTTCTCCGCCCGATACCCGGAATTGAAAGTTCTGGAAATCCCATCCCCAACGTCGATGATTCCGCACTTACTTTCAATACCGATGTCTGGACAACCACCACACACAATCTTCAATTTTACCCATCTACTCCGTCCGATTTCCGGTGCCTTCCGGATCTCGCTCTAGGCAGAGCGAAGAATCATCCATTGGAGAATCGGCGGTCTCTTGATTCCGAAGAGTCGGTCATGACCAGCTTCGGAAGCGGCGATCTCGGCGACCAACGGAAAGAGACGAAGCTTTTAAACTTATTCGTCTGA

Protein sequence

MISRLTTSQKWYSLECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLALGRAKNHPLENRRSLDSEESVMTSFGSGDLGDQRKETKLLNLFV

Homology

[Close]

BLAST of ClCG05G020510 vs. NCBI nr
Match: XP_038899091.1 (LOB domain-containing protein 39-like [Benincasa hispida])

HSP 1 Score: 270.4 bits (690), Expect = 9.8e-69
Identity = 130/147 (88.44%), Postives = 135/147 (91.84%), Query Frame = 0


Query: 12  YSLECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESS 71
           Y     LFQSLLFEACGRTVNPVSGAVGLL SGNWHVCQAAADTVLNGGVLRPIPG E S
Sbjct: 57  YHQRPALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAADTVLNGGVLRPIPGFEIS 116

Query: 72  GNPIPNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLALGRAKNHPLENRRSLDS 131
           GN  PN+D+S LTFNTDVWTTTTHNLQFYPSTPSDFRCLPDL+LGR KNHPLENRRSLDS
Sbjct: 117 GNLTPNLDESLLTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLSLGRGKNHPLENRRSLDS 176

Query: 132 EESVMTSFGSGDLGDQRKETKLLNLFV 159
           EESVMTSFGSGD+GD+RKETKLLNLFV
Sbjct: 177 EESVMTSFGSGDVGDRRKETKLLNLFV 203

[Close]

BLAST of ClCG05G020510 vs. NCBI nr
Match: XP_008452637.1 (PREDICTED: LOB domain-containing protein 39-like [Cucumis melo] >KAA0064436.1 LOB domain-containing protein 39-like [Cucumis melo var. makuwa])

HSP 1 Score: 270.4 bits (690), Expect = 9.8e-69
Identity = 129/147 (87.76%), Postives = 133/147 (90.48%), Query Frame = 0


Query: 12  YSLECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESS 71
           Y     LFQSLLFEACGRTVNPVSGAVGLL SGNWHVCQAAADT+LNGGVLRPIPGIE S
Sbjct: 57  YHQRPALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAADTILNGGVLRPIPGIEIS 116

Query: 72  GNPIPNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLALGRAKNHPLENRRSLDS 131
           GNP PN+DDS+ TFN DVWTTTTHNLQFYPSTPSDFRCLPDL L R K HPLENRRSLDS
Sbjct: 117 GNPTPNLDDSSFTFNNDVWTTTTHNLQFYPSTPSDFRCLPDLGLNRTKKHPLENRRSLDS 176

Query: 132 EESVMTSFGSGDLGDQRKETKLLNLFV 159
           EESVMTSFGSGDLG+QRKETKLLNLFV
Sbjct: 177 EESVMTSFGSGDLGEQRKETKLLNLFV 203

[Close]

BLAST of ClCG05G020510 vs. NCBI nr
Match: XP_004141401.1 (LOB domain-containing protein 39 [Cucumis sativus] >KGN55262.1 hypothetical protein Csa_012579 [Cucumis sativus])

HSP 1 Score: 269.2 bits (687), Expect = 2.2e-68
Identity = 133/149 (89.26%), Postives = 138/149 (92.62%), Query Frame = 0


Query: 12  YSLECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESS 71
           Y     LFQSLLFEACGRTVNPVSGAVGLL +GNWHVCQAAADT+LNGGVLRPIPGIE S
Sbjct: 57  YHQRPALFQSLLFEACGRTVNPVSGAVGLLSTGNWHVCQAAADTILNGGVLRPIPGIEIS 116

Query: 72  GNPIPNVDDSALTFNTDVWTTTT-HNLQFYPSTPSDFRCLPDLALGRAKN-HPLENRRSL 131
            NP PN+DDS+LTFNTDVWTTTT HNLQFYPSTPSDFRCLPDL+LGRAKN HPLENRRSL
Sbjct: 117 ANPTPNLDDSSLTFNTDVWTTTTVHNLQFYPSTPSDFRCLPDLSLGRAKNHHPLENRRSL 176

Query: 132 DSEESVMTSFGSGDLGDQRKETKLLNLFV 159
           DSEESVMTSFGSGDLGDQRKETKLLNLFV
Sbjct: 177 DSEESVMTSFGSGDLGDQRKETKLLNLFV 205

[Close]

BLAST of ClCG05G020510 vs. NCBI nr
Match: XP_023535944.1 (LOB domain-containing protein 39-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 241.9 bits (616), Expect = 3.7e-60
Identity = 120/143 (83.92%), Postives = 127/143 (88.81%), Query Frame = 0


Query: 18  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPN 77
           LFQSLLFEACGRTVNPVSGAVGLL SGNWHVCQ AADTVL+GGVLRPIPGIE SGNP  N
Sbjct: 63  LFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQLAADTVLSGGVLRPIPGIELSGNPTRN 122

Query: 78  VDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLAL--GRAKNHPLENRRSLDSEESV 137
           VDDS LTFNTDVWTTT  NLQ YPSTPSDFRCLPDLA+  GRAKNH LENRRSLDSE+S+
Sbjct: 123 VDDSTLTFNTDVWTTTAQNLQLYPSTPSDFRCLPDLAVAAGRAKNHTLENRRSLDSEDSI 182

Query: 138 MTSFGSGDLGDQRKETKLLNLFV 159
           MTSFGS   GD+RK+ KLLNLF+
Sbjct: 183 MTSFGS---GDRRKQRKLLNLFI 202

[Close]

BLAST of ClCG05G020510 vs. NCBI nr
Match: KAG7024296.1 (LOB domain-containing protein 38, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 236.9 bits (603), Expect = 1.2e-58
Identity = 118/143 (82.52%), Postives = 127/143 (88.81%), Query Frame = 0


Query: 18  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPN 77
           LFQSLLFEACGRTVNPVSGAVGLL SGNWHVCQ AA+TVL+GGVLRPIPGIE SGNP  N
Sbjct: 63  LFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQLAAETVLSGGVLRPIPGIELSGNPTRN 122

Query: 78  VDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLAL--GRAKNHPLENRRSLDSEESV 137
           VDDS+LT NTDVWTTT  NLQ YPSTPSDFRCLPDLA+  GRAKNH LENRRSLDSE+S+
Sbjct: 123 VDDSSLTSNTDVWTTTGQNLQLYPSTPSDFRCLPDLAVAAGRAKNHTLENRRSLDSEDSI 182

Query: 138 MTSFGSGDLGDQRKETKLLNLFV 159
           MTSFGS   GD+RK+ KLLNLF+
Sbjct: 183 MTSFGS---GDRRKQRKLLNLFI 202

[Close]

BLAST of ClCG05G020510 vs. ExPASy Swiss-Prot
Match: Q9SZE8 (LOB domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=LBD39 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.2e-22
Identity = 73/178 (41.01%), Postives = 94/178 (52.81%), Query Frame = 0


Query: 18  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPN 77
           LFQSLLFEACGRTVNPV+GAVG+L++ NWHVCQAA +TVL GG LRPI  +  S + + +
Sbjct: 63  LFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPISDLLESPSLMIS 122

Query: 78  VDDSALTFNTDVWTTTTHNLQFYPSTPSD---------FRCLPDLALGRAKNHPLE---- 137
            D+S+  ++ DV    TH+ +F  S  +           R   D  L    NH L     
Sbjct: 123 CDESSEIWHQDVSRNQTHHCRFSTSRSTTEMKDSLVNRKRLKSDSDLDLQVNHGLTLTAP 182

Query: 138 ------------------NRRSLDSEESVMTS-FGSGDLGDQRK-----ETKLLNLFV 159
                             +R    SEESV TS + +G  GD ++     E KLLNLFV
Sbjct: 183 AVPVPFLPPSSFCKVVKGDRPGSPSEESVTTSCWENGMRGDNKQKRNKGEKKLLNLFV 240

[Close]

BLAST of ClCG05G020510 vs. ExPASy Swiss-Prot
Match: Q9SN23 (LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.8e-18
Identity = 43/69 (62.32%), Postives = 55/69 (79.71%), Query Frame = 0


Query: 18  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGN---- 77
           LFQSLL+EACGRTVNPV+GAVGLL++GNW+VCQAA +TVL GG L+PIP + + G     
Sbjct: 63  LFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPIPELLNGGGFAGF 122

Query: 78  PIPNVDDSA 83
           P P  D+++
Sbjct: 123 PSPTSDEAS 131

[Close]

BLAST of ClCG05G020510 vs. ExPASy Swiss-Prot
Match: Q9FN11 (LOB domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=LBD37 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.1e-17
Identity = 38/55 (69.09%), Postives = 49/55 (89.09%), Query Frame = 0


Query: 18  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSG 73
           LFQSLL+EACGRTVNPV+GA+G+L++GNW++CQAA +TVL GG LRPIP + + G
Sbjct: 63  LFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPIPELLTHG 117

[Close]

BLAST of ClCG05G020510 vs. ExPASy Swiss-Prot
Match: Q9ZW96 (LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.0e-12
Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 0


Query: 14  LECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPI 66
           L   +F+SLL+EACGR VNP+ G+VGLL+SGNWH+CQAA + V+ G  + PI
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPI 112

[Close]

BLAST of ClCG05G020510 vs. ExPASy Swiss-Prot
Match: Q9CA30 (LOB domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=LBD42 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.8e-12
Identity = 36/65 (55.38%), Postives = 45/65 (69.23%), Query Frame = 0


Query: 14  LECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVL--RPIPGIESS 73
           L   +F+SLL+EACGR VNPV G+VGL++SGNW  CQAA D VLNG  +   P+P   +S
Sbjct: 61  LRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASAS 120

Query: 74  GNPIP 77
              IP
Sbjct: 121 HQIIP 125

[Close]

BLAST of ClCG05G020510 vs. ExPASy TrEMBL
Match: A0A5A7VDI5 (LOB domain-containing protein 39-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G001480 PE=3 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.8e-69
Identity = 129/147 (87.76%), Postives = 133/147 (90.48%), Query Frame = 0


Query: 12  YSLECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESS 71
           Y     LFQSLLFEACGRTVNPVSGAVGLL SGNWHVCQAAADT+LNGGVLRPIPGIE S
Sbjct: 57  YHQRPALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAADTILNGGVLRPIPGIEIS 116

Query: 72  GNPIPNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLALGRAKNHPLENRRSLDS 131
           GNP PN+DDS+ TFN DVWTTTTHNLQFYPSTPSDFRCLPDL L R K HPLENRRSLDS
Sbjct: 117 GNPTPNLDDSSFTFNNDVWTTTTHNLQFYPSTPSDFRCLPDLGLNRTKKHPLENRRSLDS 176

Query: 132 EESVMTSFGSGDLGDQRKETKLLNLFV 159
           EESVMTSFGSGDLG+QRKETKLLNLFV
Sbjct: 177 EESVMTSFGSGDLGEQRKETKLLNLFV 203

[Close]

BLAST of ClCG05G020510 vs. ExPASy TrEMBL
Match: A0A1S3BVG9 (LOB domain-containing protein 39-like OS=Cucumis melo OX=3656 GN=LOC103493596 PE=3 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.8e-69
Identity = 129/147 (87.76%), Postives = 133/147 (90.48%), Query Frame = 0


Query: 12  YSLECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESS 71
           Y     LFQSLLFEACGRTVNPVSGAVGLL SGNWHVCQAAADT+LNGGVLRPIPGIE S
Sbjct: 57  YHQRPALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAADTILNGGVLRPIPGIEIS 116

Query: 72  GNPIPNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLALGRAKNHPLENRRSLDS 131
           GNP PN+DDS+ TFN DVWTTTTHNLQFYPSTPSDFRCLPDL L R K HPLENRRSLDS
Sbjct: 117 GNPTPNLDDSSFTFNNDVWTTTTHNLQFYPSTPSDFRCLPDLGLNRTKKHPLENRRSLDS 176

Query: 132 EESVMTSFGSGDLGDQRKETKLLNLFV 159
           EESVMTSFGSGDLG+QRKETKLLNLFV
Sbjct: 177 EESVMTSFGSGDLGEQRKETKLLNLFV 203

[Close]

BLAST of ClCG05G020510 vs. ExPASy TrEMBL
Match: A0A0A0L3S5 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G642430 PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.1e-68
Identity = 133/149 (89.26%), Postives = 138/149 (92.62%), Query Frame = 0


Query: 12  YSLECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESS 71
           Y     LFQSLLFEACGRTVNPVSGAVGLL +GNWHVCQAAADT+LNGGVLRPIPGIE S
Sbjct: 57  YHQRPALFQSLLFEACGRTVNPVSGAVGLLSTGNWHVCQAAADTILNGGVLRPIPGIEIS 116

Query: 72  GNPIPNVDDSALTFNTDVWTTTT-HNLQFYPSTPSDFRCLPDLALGRAKN-HPLENRRSL 131
            NP PN+DDS+LTFNTDVWTTTT HNLQFYPSTPSDFRCLPDL+LGRAKN HPLENRRSL
Sbjct: 117 ANPTPNLDDSSLTFNTDVWTTTTVHNLQFYPSTPSDFRCLPDLSLGRAKNHHPLENRRSL 176

Query: 132 DSEESVMTSFGSGDLGDQRKETKLLNLFV 159
           DSEESVMTSFGSGDLGDQRKETKLLNLFV
Sbjct: 177 DSEESVMTSFGSGDLGDQRKETKLLNLFV 205

[Close]

BLAST of ClCG05G020510 vs. ExPASy TrEMBL
Match: A0A6J1FEE1 (LOB domain-containing protein 38-like OS=Cucurbita moschata OX=3662 GN=LOC111443315 PE=3 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.9e-57
Identity = 116/143 (81.12%), Postives = 125/143 (87.41%), Query Frame = 0


Query: 18  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPN 77
           LFQSLLFEACGRTVNPVSGAVGLL SGNWHVCQ AA+TVL+GGVLRPIPGIE SGNP  N
Sbjct: 63  LFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQLAAETVLSGGVLRPIPGIELSGNPTRN 122

Query: 78  VDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLALG--RAKNHPLENRRSLDSEESV 137
           VDDS+LT NTDVWTTT  NLQ YPSTPSDFRCLPDLA+   RAKNH  ENRRSLDSE+S+
Sbjct: 123 VDDSSLTSNTDVWTTTGQNLQLYPSTPSDFRCLPDLAVAAVRAKNHTPENRRSLDSEDSI 182

Query: 138 MTSFGSGDLGDQRKETKLLNLFV 159
           MTSFGS   GD+RK+ KLLNLF+
Sbjct: 183 MTSFGS---GDRRKQRKLLNLFI 202

[Close]

BLAST of ClCG05G020510 vs. ExPASy TrEMBL
Match: A0A6J1IIW5 (LOB domain-containing protein 39-like OS=Cucurbita maxima OX=3661 GN=LOC111477277 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 5.7e-54
Identity = 109/141 (77.30%), Postives = 120/141 (85.11%), Query Frame = 0


Query: 18  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPN 77
           LFQSLLFEACGRTVNPVSGAVGL  SGNWHVCQ AADTVL+GGVLRPIPGIE SGNP  N
Sbjct: 63  LFQSLLFEACGRTVNPVSGAVGLFSSGNWHVCQLAADTVLSGGVLRPIPGIELSGNPTRN 122

Query: 78  VDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLALGRAKNHPLENRRSLDSEESVMT 137
           +DDS+LTFNTDVWTTT  NLQ YPS+PSDFRCLPDLA+        +NRRSLDSE+S+MT
Sbjct: 123 LDDSSLTFNTDVWTTTAQNLQLYPSSPSDFRCLPDLAVAA---RTAKNRRSLDSEDSIMT 182

Query: 138 SFGSGDLGDQRKETKLLNLFV 159
           SFGS   GD+RK+ KLLNLF+
Sbjct: 183 SFGS---GDRRKQRKLLNLFI 197

[Close]

BLAST of ClCG05G020510 vs. TAIR 10
Match: AT4G37540.1 (LOB domain-containing protein 39 )

HSP 1 Score: 105.9 bits (263), Expect = 3.0e-23
Identity = 73/178 (41.01%), Postives = 94/178 (52.81%), Query Frame = 0


Query: 18  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPN 77
           LFQSLLFEACGRTVNPV+GAVG+L++ NWHVCQAA +TVL GG LRPI  +  S + + +
Sbjct: 63  LFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPISDLLESPSLMIS 122

Query: 78  VDDSALTFNTDVWTTTTHNLQFYPSTPSD---------FRCLPDLALGRAKNHPLE---- 137
            D+S+  ++ DV    TH+ +F  S  +           R   D  L    NH L     
Sbjct: 123 CDESSEIWHQDVSRNQTHHCRFSTSRSTTEMKDSLVNRKRLKSDSDLDLQVNHGLTLTAP 182

Query: 138 ------------------NRRSLDSEESVMTS-FGSGDLGDQRK-----ETKLLNLFV 159
                             +R    SEESV TS + +G  GD ++     E KLLNLFV
Sbjct: 183 AVPVPFLPPSSFCKVVKGDRPGSPSEESVTTSCWENGMRGDNKQKRNKGEKKLLNLFV 240

[Close]

BLAST of ClCG05G020510 vs. TAIR 10
Match: AT3G49940.1 (LOB domain-containing protein 38 )

HSP 1 Score: 92.4 bits (228), Expect = 3.4e-19
Identity = 43/69 (62.32%), Postives = 55/69 (79.71%), Query Frame = 0


Query: 18  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGN---- 77
           LFQSLL+EACGRTVNPV+GAVGLL++GNW+VCQAA +TVL GG L+PIP + + G     
Sbjct: 63  LFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPIPELLNGGGFAGF 122

Query: 78  PIPNVDDSA 83
           P P  D+++
Sbjct: 123 PSPTSDEAS 131

[Close]

BLAST of ClCG05G020510 vs. TAIR 10
Match: AT5G67420.1 (LOB domain-containing protein 37 )

HSP 1 Score: 89.7 bits (221), Expect = 2.2e-18
Identity = 38/55 (69.09%), Postives = 49/55 (89.09%), Query Frame = 0


Query: 18  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSG 73
           LFQSLL+EACGRTVNPV+GA+G+L++GNW++CQAA +TVL GG LRPIP + + G
Sbjct: 63  LFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPIPELLTHG 117

[Close]

BLAST of ClCG05G020510 vs. TAIR 10
Match: AT1G67100.1 (LOB domain-containing protein 40 )

HSP 1 Score: 74.7 bits (182), Expect = 7.4e-14
Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 0


Query: 14  LECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPI 66
           L   +F+SLL+EACGR VNP+ G+VGLL+SGNWH+CQAA + V+ G  + PI
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPI 112

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BLAST of ClCG05G020510 vs. TAIR 10
Match: AT1G68510.1 (LOB domain-containing protein 42 )

HSP 1 Score: 73.9 bits (180), Expect = 1.3e-13
Identity = 36/65 (55.38%), Postives = 45/65 (69.23%), Query Frame = 0


Query: 14  LECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVL--RPIPGIESS 73
           L   +F+SLL+EACGR VNPV G+VGL++SGNW  CQAA D VLNG  +   P+P   +S
Sbjct: 61  LRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASAS 120

Query: 74  GNPIP 77
              IP
Sbjct: 121 HQIIP 125

The following BLAST results are available for this feature:

BLAST of ClCG05G020510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899091.1	9.8e-69	88.44	LOB domain-containing protein 39-like [Benincasa hispida]	[more]
XP_008452637.1	9.8e-69	87.76	PREDICTED: LOB domain-containing protein 39-like [Cucumis melo] >KAA0064436.1 LO...	[more]
XP_004141401.1	2.2e-68	89.26	LOB domain-containing protein 39 [Cucumis sativus] >KGN55262.1 hypothetical prot...	[more]
XP_023535944.1	3.7e-60	83.92	LOB domain-containing protein 39-like [Cucurbita pepo subsp. pepo]	[more]
KAG7024296.1	1.2e-58	82.52	LOB domain-containing protein 38, partial [Cucurbita argyrosperma subsp. argyros...	[more]

BLAST of ClCG05G020510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZE8	4.2e-22	41.01	LOB domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=LBD39 PE=2 S...	[more]
Q9SN23	4.8e-18	62.32	LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 S...	[more]
Q9FN11	3.1e-17	69.09	LOB domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=LBD37 PE=2 S...	[more]
Q9ZW96	1.0e-12	59.62	LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 S...	[more]
Q9CA30	1.8e-12	55.38	LOB domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=LBD42 PE=1 S...	[more]

BLAST of ClCG05G020510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VDI5	4.8e-69	87.76	LOB domain-containing protein 39-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3BVG9	4.8e-69	87.76	LOB domain-containing protein 39-like OS=Cucumis melo OX=3656 GN=LOC103493596 PE...	[more]
A0A0A0L3S5	1.1e-68	89.26	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G642430 PE=3 SV...	[more]
A0A6J1FEE1	1.9e-57	81.12	LOB domain-containing protein 38-like OS=Cucurbita moschata OX=3662 GN=LOC111443...	[more]
A0A6J1IIW5	5.7e-54	77.30	LOB domain-containing protein 39-like OS=Cucurbita maxima OX=3661 GN=LOC11147727...	[more]

BLAST of ClCG05G020510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37540.1	3.0e-23	41.01	LOB domain-containing protein 39	[more]
AT3G49940.1	3.4e-19	62.32	LOB domain-containing protein 38	[more]
AT5G67420.1	2.2e-18	69.09	LOB domain-containing protein 37	[more]
AT1G67100.1	7.4e-14	59.62	LOB domain-containing protein 40	[more]
AT1G68510.1	1.3e-13	55.38	LOB domain-containing protein 42	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 17..55 e-value: 4.4E-6 score: 27.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..143
None	No IPR available	PANTHER	PTHR31304:SF38	LOB DOMAIN-CONTAINING PROTEIN 39-LIKE	coord: 15..158
None	No IPR available	PANTHER	PTHR31304	LOB DOMAIN-CONTAINING PROTEIN 38	coord: 15..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G020510.1	ClCG05G020510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression