ClCG05G020030 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCAGAGGAATTTATGGAACACACTCAGTCCCTGGAACCGTCTTCTTCTTCTCTTCCTCCCGGCTGTCATTTCTTCCCCTCGGATGAGCAGCTTCTCCGCTTTTACCTATCCAACAAGACCACTGCAACCATTTCCCCGAATTTGCTCAACAATGGCGCTTCCAAGGGCTATAACTTAATCAAAGACCTCGACCCTTTCGATTACGATCCTTTCGATTTGCCGGACTTTGCGTGTTTCTCTTATGGTTCGAGAGGAAGAAAGAAGCACTGGTATTACTATGCGGTTACTGCTTTTAGGGAGAACAGAGGACGGATAAGAATGAAGAGCGGGTACTGGAGAAGGAAGGGGAGAGTGAGGGAAGTGATTGGCCATCGAGGAGTTGTGCTTGGGATGAAGAGGAGTTTCGTGTTTTATTTAGGGAATTCGATCAAGAATGCTGTGAAGACTAATTGGATCATGTACGAGTATGCCCTAGGCGATCATTTTAAGGTACTTCTATCGCTCATTCCTTTTCAATCTCCGGTTTAGCTTCCAGTTTACCTACTAACCGTAGATAGAATAAATTGATTCTGGCAATATGTCTTTCTTTTCCCTTTTCATGGTTTCCTAATTGTAGAACGTCCGTGGTTTGTACAATATATTGAGTTCAAATTGTTACAACAGCCTTTGGTATGAGTACTGTAATAGGCTTTTCCACTGATTTTTTTATCCTACTAATTGCAATCCATAGGTTTGGACAAGTATTTCAATTTACTGAGTTTGGTATGTTATCTTCACTTTGGGACAGGGTTTTGGGGGTAATTATGGCTTTCTAAGGTCGAAAAATTGGCTTTGATCCACAGGCTTCTTGTGTACTACATCGGGTATTTGTAAGTGGTCGGGGAAATAGCATTTCGGGTAATGGCTTAAGTTCTTATGGCGACGGAAGTGTCTCAGCAATATGTCATAATGGTAATCAACAAGACGGAATTCAAGTAACTAATATGGTTGAGGCTGGGCCTTGTGAAGGGGATACTTTGAATACAAACAATGGCATCACAAGACATGTAATGGTACGTGCTGAGAAGCCAAATTGTCTACTTGTTACAGAACCTGTTTCTGCTCCTACTACTTCGCAAGTTCCATCAGAAGCTCACCCTTGCGAGATGGTAATATTAATTTGTATCAAATACTTATCATGTCCGTTTCTACCACATGGTTCTCTTGTTGATACAAGTAGAAGTACTAGGGATGGAAACCAAGGAATCAATCTCATTTAATCCCAAAGGCTTGGTTTTTCTTCCCTTTTGGGGCATAACATTCTGTGATTTGTGTGCAGATGACTTCCTCGCCTGTAATCCCTCCTGGTTCAATGCCTACTCACGTTATAGACAAACAGAAACTAATCTCTATTCTGGAGGGAGATTTTCTAGAATTAGACGATCTTGTCGATTAATTTTCCTCGGCAAATATCATTATCATCGGGTCTCAAAGACATCAGATGACGACTGTTAATTCTCAGGCTTATTCCTGCCTGACGTTAAATCCCAGATGGGGTTCAAATTCCTCAGGAAAGGGACACTGTCTATTTACTGAACCATCTCTTAAATTTGAAAGAAACTCTCTATCATGGAGTTAGCAAGATTGGATAACGGAGCAAATTACCAGCTAAGGTAATTGACTGCTTTTCTTTATGTTGTTTGCTCTAATTTATTCAGGAAATGAGTAGTTTTCCTTTTTGTTTTTTTTTTGTTTGTTTCAGTGGATGTAAATTTGCAATGGGCCGTATGTTTGGCATTTTTCTCCTGATGAACAAGGAGATGTTGGTTTATTCACCGAAATTGGAAGGAAGACATGAATGTAGGTGTAATTAAGGCTTTGTTGTGTATATCATGTTGATGTTTTTCCATTGACCATGAAGCTTTGAAAATCTTCGGTTTTATCCCTACGCTATTTATGCTAATGTTATATCATTTATCCATGAACTCTTCGGATATGCCTTCAGCAGGTCACTTTCTGATTTTCCCCCACCTTGAATTCCATAGATTTCAATGAAGATCTATTATGAATCTTATTCTGCATAAGGCTTGAATTGGTTACATGTTGGCACTTTTTTTATCCTATTATTAGTAAAGATGATAATATAGATTTGCTTGATTCAGCTTTTTCATAGTATCTTTTAGGTA GGCAGAGGAATTTATGGAACACACTCAGTCCCTGGAACCGTCTTCTTCTTCTCTTCCTCCCGGCTGTCATTTCTTCCCCTCGGATGAGCAGCTTCTCCGCTTTTACCTATCCAACAAGACCACTGCAACCATTTCCCCGAATTTGCTCAACAATGGCGCTTCCAAGGGCTATAACTTAATCAAAGACCTCGACCCTTTCGATTACGATCCTTTCGATTTGCCGGACTTTGCGTGTTTCTCTTATGGTTCGAGAGGAAGAAAGAAGCACTGGTATTACTATGCGGTTACTGCTTTTAGGGAGAACAGAGGACGGATAAGAATGAAGAGCGGGTACTGGAGAAGGAAGGGGAGAGTGAGGGAAGTGATTGGCCATCGAGGAGTTGTGCTTGGGATGAAGAGGAGTTTCGTGTTTTATTTAGGGAATTCGATCAAGAATGCTGTGAAGACTAATTGGATCATGTACGAGTATGCCCTAGGCGATCATTTTAAGGCTTCTTGTGTACTACATCGGGTATTTGTAAGTGGTCGGGGAAATAGCATTTCGGGTAATGGCTTAAGTTCTTATGGCGACGGAAGTGTCTCAGCAATATGTCATAATGGTAATCAACAAGACGGAATTCAAGTAACTAATATGGTTGAGGCTGGGCCTTGTGAAGGGGATACTTTGAATACAAACAATGGCATCACAAGACATGTAATGGTACGTGCTGAGAAGCCAAATTGTCTACTTGTTACAGAACCTGTTTCTGCTCCTACTACTTCGCAAGTTCCATCAGAAGCTCACCCTTGCGAGATGATGACTTCCTCGCCTGTAATCCCTCCTGGTTCAATGCCTACTCACGTTATAGACAAACAGAAACTAATCTCTATTCTGGAGGGAGATTTTCTAGAATTAGACGATCTTGTCGATTAATTTTCCTCGGCAAATATCATTATCATCGGGTCTCAAAGACATCAGATGACGACTGTTAATTCTCAGGCTTATTCCTGCCTGACGTTAAATCCCAGATGGGGTTCAAATTCCTCAGGAAAGGGACACTGTCTATTTACTGAACCATCTCTTAAATTTGAAAGAAACTCTCTATCATGGAGTTAGCAAGATTGGATAACGGAGCAAATTACCAGCTAAGTGGATGTAAATTTGCAATGGGCCGTATGTTTGGCATTTTTCTCCTGATGAACAAGGAGATGTTGGTTTATTCACCGAAATTGGAAGGAAGACATGAATGTAGGTGTAATTAAGGCTTTGTTGTGTATATCATGTTGATGTTTTTCCATTGACCATGAAGCTTTGAAAATCTTCGGTTTTATCCCTACGCTATTTATGCTAATGTTATATCATTTATCCATGAACTCTTCGGATATGCCTTCAGCAGGTCACTTTCTGATTTTCCCCCACCTTGAATTCCATAGATTTCAATGAAGATCTATTATGAATCTTATTCTGCATAAGGCTTGAATTGGTTACATGTTGGCACTTTTTTTATCCTATTATTAGTAAAGATGATAATATAGATTTGCTTGATTCAGCTTTTTCATAGTATCTTTTAGGTA ATGGAACACACTCAGTCCCTGGAACCGTCTTCTTCTTCTCTTCCTCCCGGCTGTCATTTCTTCCCCTCGGATGAGCAGCTTCTCCGCTTTTACCTATCCAACAAGACCACTGCAACCATTTCCCCGAATTTGCTCAACAATGGCGCTTCCAAGGGCTATAACTTAATCAAAGACCTCGACCCTTTCGATTACGATCCTTTCGATTTGCCGGACTTTGCGTGTTTCTCTTATGGTTCGAGAGGAAGAAAGAAGCACTGGTATTACTATGCGGTTACTGCTTTTAGGGAGAACAGAGGACGGATAAGAATGAAGAGCGGGTACTGGAGAAGGAAGGGGAGAGTGAGGGAAGTGATTGGCCATCGAGGAGTTGTGCTTGGGATGAAGAGGAGTTTCGTGTTTTATTTAGGGAATTCGATCAAGAATGCTGTGAAGACTAATTGGATCATGTACGAGTATGCCCTAGGCGATCATTTTAAGGCTTCTTGTGTACTACATCGGGTATTTGTAAGTGGTCGGGGAAATAGCATTTCGGGTAATGGCTTAAGTTCTTATGGCGACGGAAGTGTCTCAGCAATATGTCATAATGGTAATCAACAAGACGGAATTCAAGTAACTAATATGGTTGAGGCTGGGCCTTGTGAAGGGGATACTTTGAATACAAACAATGGCATCACAAGACATGTAATGGTACGTGCTGAGAAGCCAAATTGTCTACTTGTTACAGAACCTGTTTCTGCTCCTACTACTTCGCAAGTTCCATCAGAAGCTCACCCTTGCGAGATGATGACTTCCTCGCCTGTAATCCCTCCTGGTTCAATGCCTACTCACGTTATAGACAAACAGAAACTAATCTCTATTCTGGAGGGAGATTTTCTAGAATTAGACGATCTTGTCGATTAA MEHTQSLEPSSSSLPPGCHFFPSDEQLLRFYLSNKTTATISPNLLNNGASKGYNLIKDLDPFDYDPFDLPDFACFSYGSRGRKKHWYYYAVTAFRENRGRIRMKSGYWRRKGRVREVIGHRGVVLGMKRSFVFYLGNSIKNAVKTNWIMYEYALGDHFKASCVLHRVFVSGRGNSISGNGLSSYGDGSVSAICHNGNQQDGIQVTNMVEAGPCEGDTLNTNNGITRHVMVRAEKPNCLLVTEPVSAPTTSQVPSEAHPCEMMTSSPVIPPGSMPTHVIDKQKLISILEGDFLELDDLVD Homology
BLAST of ClCG05G020030 vs. NCBI nr
Match: XP_038897865.1 (NAC domain-containing protein 83-like [Benincasa hispida]) HSP 1 Score: 548.9 bits (1413), Expect = 2.7e-152 Identity = 272/300 (90.67%), Postives = 283/300 (94.33%), Query Frame = 0
BLAST of ClCG05G020030 vs. NCBI nr
Match: XP_008452571.1 (PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Cucumis melo] >KAA0064397.1 protein CUP-SHAPED COTYLEDON 3-like [Cucumis melo var. makuwa] >TYK20190.1 protein CUP-SHAPED COTYLEDON 3-like [Cucumis melo var. makuwa]) HSP 1 Score: 453.0 bits (1164), Expect = 2.0e-123 Identity = 234/313 (74.76%), Postives = 251/313 (80.19%), Query Frame = 0
BLAST of ClCG05G020030 vs. NCBI nr
Match: XP_022143484.1 (NAC domain-containing protein 19-like isoform X2 [Momordica charantia]) HSP 1 Score: 449.9 bits (1156), Expect = 1.7e-122 Identity = 231/302 (76.49%), Postives = 251/302 (83.11%), Query Frame = 0
BLAST of ClCG05G020030 vs. NCBI nr
Match: XP_004141384.2 (NAC domain-containing protein JA2L [Cucumis sativus] >KGN55208.1 hypothetical protein Csa_012461 [Cucumis sativus]) HSP 1 Score: 443.0 bits (1138), Expect = 2.1e-120 Identity = 226/312 (72.44%), Postives = 251/312 (80.45%), Query Frame = 0
BLAST of ClCG05G020030 vs. NCBI nr
Match: XP_022975971.1 (protein CUP-SHAPED COTYLEDON 3-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 433.3 bits (1113), Expect = 1.7e-117 Identity = 223/301 (74.09%), Postives = 242/301 (80.40%), Query Frame = 0
BLAST of ClCG05G020030 vs. ExPASy Swiss-Prot
Match: Q9LS24 (NAC domain-containing protein 96 OS=Arabidopsis thaliana OX=3702 GN=NAC096 PE=1 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 3.2e-15 Identity = 49/152 (32.24%), Postives = 76/152 (50.00%), Query Frame = 0
BLAST of ClCG05G020030 vs. ExPASy Swiss-Prot
Match: A2WJP3 (NAC domain-containing protein 20 OS=Oryza sativa subsp. indica OX=39946 GN=NAC20 PE=1 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 4.2e-15 Identity = 54/163 (33.13%), Postives = 84/163 (51.53%), Query Frame = 0
BLAST of ClCG05G020030 vs. ExPASy Swiss-Prot
Match: A2WQE4 (NAC domain-containing protein 26 OS=Oryza sativa subsp. indica OX=39946 GN=NAC26 PE=1 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 4.2e-15 Identity = 54/163 (33.13%), Postives = 84/163 (51.53%), Query Frame = 0
BLAST of ClCG05G020030 vs. ExPASy Swiss-Prot
Match: Q5VNK1 (NAC domain-containing protein 26 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC26 PE=1 SV=2) HSP 1 Score: 83.6 bits (205), Expect = 4.2e-15 Identity = 54/163 (33.13%), Postives = 84/163 (51.53%), Query Frame = 0
BLAST of ClCG05G020030 vs. ExPASy Swiss-Prot
Match: Q9FTY0 (NAC domain-containing protein 20 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC20 PE=1 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 7.2e-15 Identity = 54/163 (33.13%), Postives = 83/163 (50.92%), Query Frame = 0
BLAST of ClCG05G020030 vs. ExPASy TrEMBL
Match: A0A5A7VBJ1 (Protein CUP-SHAPED COTYLEDON 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003240 PE=4 SV=1) HSP 1 Score: 453.0 bits (1164), Expect = 9.8e-124 Identity = 234/313 (74.76%), Postives = 251/313 (80.19%), Query Frame = 0
BLAST of ClCG05G020030 vs. ExPASy TrEMBL
Match: A0A1S3BU62 (protein CUP-SHAPED COTYLEDON 3-like OS=Cucumis melo OX=3656 GN=LOC103493555 PE=4 SV=1) HSP 1 Score: 453.0 bits (1164), Expect = 9.8e-124 Identity = 234/313 (74.76%), Postives = 251/313 (80.19%), Query Frame = 0
BLAST of ClCG05G020030 vs. ExPASy TrEMBL
Match: A0A6J1CPF8 (NAC domain-containing protein 19-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013269 PE=4 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 8.3e-123 Identity = 231/302 (76.49%), Postives = 251/302 (83.11%), Query Frame = 0
BLAST of ClCG05G020030 vs. ExPASy TrEMBL
Match: A0A0A0L0B7 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G639950 PE=4 SV=1) HSP 1 Score: 443.0 bits (1138), Expect = 1.0e-120 Identity = 226/312 (72.44%), Postives = 251/312 (80.45%), Query Frame = 0
BLAST of ClCG05G020030 vs. ExPASy TrEMBL
Match: A0A6J1IFM5 (protein CUP-SHAPED COTYLEDON 3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111476510 PE=4 SV=1) HSP 1 Score: 433.3 bits (1113), Expect = 8.0e-118 Identity = 223/301 (74.09%), Postives = 242/301 (80.40%), Query Frame = 0
BLAST of ClCG05G020030 vs. TAIR 10
Match: AT4G28530.1 (NAC domain containing protein 74 ) HSP 1 Score: 87.8 bits (216), Expect = 1.6e-17 Identity = 65/189 (34.39%), Postives = 96/189 (50.79%), Query Frame = 0
BLAST of ClCG05G020030 vs. TAIR 10
Match: AT5G46590.1 (NAC domain containing protein 96 ) HSP 1 Score: 84.0 bits (206), Expect = 2.3e-16 Identity = 49/152 (32.24%), Postives = 76/152 (50.00%), Query Frame = 0
BLAST of ClCG05G020030 vs. TAIR 10
Match: AT4G27410.2 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein ) HSP 1 Score: 83.2 bits (204), Expect = 3.9e-16 Identity = 53/151 (35.10%), Postives = 79/151 (52.32%), Query Frame = 0
BLAST of ClCG05G020030 vs. TAIR 10
Match: AT1G69490.1 (NAC-like, activated by AP3/PI ) HSP 1 Score: 82.8 bits (203), Expect = 5.1e-16 Identity = 54/159 (33.96%), Postives = 84/159 (52.83%), Query Frame = 0
BLAST of ClCG05G020030 vs. TAIR 10
Match: AT1G54330.1 (NAC domain containing protein 20 ) HSP 1 Score: 82.0 bits (201), Expect = 8.8e-16 Identity = 53/166 (31.93%), Postives = 84/166 (50.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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