ClCG04G010920 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAACTTCCCAAAAAAACAAGAACTCAATTGGATTTCTTCTTTCTCTGAAACCCATCTCGGAAACTGTAAAAATGGCGAGACTAATGAGAGAAATTGGCAGTGAAAATGGAAGTTTTGGCCTCGCCGGCGGTGACATTTATTTGCTGTTTTGGGCGGCTTTGGTTACACTCTCCATAATTTCAACCATAATTTTCTCTTGCTCCGACGGCATGTCAAAAGAGAGGAATTCCACGGCCGACGTCGAGCTTTACGGCGGCGGTTGCGCCGCCGGGTGCGGCGCTGGATGTGGTGCTTGA ATGAAAACTTCCCAAAAAAACAAGAACTCAATTGGATTTCTTCTTTCTCTGAAACCCATCTCGGAAACTGTAAAAATGGCGAGACTAATGAGAGAAATTGGCAGTGAAAATGGAAGTTTTGGCCTCGCCGGCGGTGACATTTATTTGCTGTTTTGGGCGGCTTTGGTTACACTCTCCATAATTTCAACCATAATTTTCTCTTGCTCCGACGGCATGTCAAAAGAGAGGAATTCCACGGCCGACGTCGAGCTTTACGGCGGCGGTTGCGCCGCCGGGTGCGGCGCTGGATGTGGTGCTTGA ATGAAAACTTCCCAAAAAAACAAGAACTCAATTGGATTTCTTCTTTCTCTGAAACCCATCTCGGAAACTGTAAAAATGGCGAGACTAATGAGAGAAATTGGCAGTGAAAATGGAAGTTTTGGCCTCGCCGGCGGTGACATTTATTTGCTGTTTTGGGCGGCTTTGGTTACACTCTCCATAATTTCAACCATAATTTTCTCTTGCTCCGACGGCATGTCAAAAGAGAGGAATTCCACGGCCGACGTCGAGCTTTACGGCGGCGGTTGCGCCGCCGGGTGCGGCGCTGGATGTGGTGCTTGA MKTSQKNKNSIGFLLSLKPISETVKMARLMREIGSENGSFGLAGGDIYLLFWAALVTLSIISTIIFSCSDGMSKERNSTADVELYGGGCAAGCGAGCGA Homology
BLAST of ClCG04G010920 vs. NCBI nr
Match: KAE8652552.1 (hypothetical protein Csa_013579 [Cucumis sativus]) HSP 1 Score: 140.6 bits (353), Expect = 7.4e-30 Identity = 73/91 (80.22%), Postives = 78/91 (85.71%), Query Frame = 0
BLAST of ClCG04G010920 vs. NCBI nr
Match: KAG6584341.1 (hypothetical protein SDJN03_20273, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 125.2 bits (313), Expect = 3.2e-25 Identity = 67/75 (89.33%), Postives = 69/75 (92.00%), Query Frame = 0
BLAST of ClCG04G010920 vs. NCBI nr
Match: KAG6572949.1 (hypothetical protein SDJN03_26836, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 102.4 bits (254), Expect = 2.2e-18 Identity = 56/70 (80.00%), Postives = 60/70 (85.71%), Query Frame = 0
BLAST of ClCG04G010920 vs. NCBI nr
Match: XP_015882794.1 (uncharacterized protein LOC107418606 [Ziziphus jujuba]) HSP 1 Score: 88.6 bits (218), Expect = 3.3e-14 Identity = 47/74 (63.51%), Postives = 58/74 (78.38%), Query Frame = 0
BLAST of ClCG04G010920 vs. NCBI nr
Match: PON38946.1 (hypothetical protein PanWU01x14_308610 [Parasponia andersonii]) HSP 1 Score: 86.3 bits (212), Expect = 1.6e-13 Identity = 45/74 (60.81%), Postives = 54/74 (72.97%), Query Frame = 0
BLAST of ClCG04G010920 vs. ExPASy TrEMBL
Match: A0A0A0LQU7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042580 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 1.4e-26 Identity = 63/74 (85.14%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of ClCG04G010920 vs. ExPASy TrEMBL
Match: A0A803R005 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.2e-14 Identity = 44/74 (59.46%), Postives = 52/74 (70.27%), Query Frame = 0
BLAST of ClCG04G010920 vs. ExPASy TrEMBL
Match: A0A803R004 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.2e-14 Identity = 44/74 (59.46%), Postives = 52/74 (70.27%), Query Frame = 0
BLAST of ClCG04G010920 vs. ExPASy TrEMBL
Match: A0A6P3ZT85 (uncharacterized protein LOC107418606 OS=Ziziphus jujuba OX=326968 GN=LOC107418606 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.6e-14 Identity = 47/74 (63.51%), Postives = 58/74 (78.38%), Query Frame = 0
BLAST of ClCG04G010920 vs. ExPASy TrEMBL
Match: A0A2P5AQX4 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_308610 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 8.0e-14 Identity = 45/74 (60.81%), Postives = 54/74 (72.97%), Query Frame = 0
BLAST of ClCG04G010920 vs. TAIR 10
Match: AT1G68238.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 52.8 bits (125), Expect = 1.9e-07 Identity = 26/54 (48.15%), Postives = 35/54 (64.81%), Query Frame = 0
BLAST of ClCG04G010920 vs. TAIR 10
Match: AT3G18250.1 (Putative membrane lipoprotein ) HSP 1 Score: 41.2 bits (95), Expect = 5.7e-04 Identity = 22/53 (41.51%), Postives = 35/53 (66.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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