ClCG04G010420 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGGAGAAAGGCATTATTGTTCCTGATCTATCTCTTCAAATTAGCCCTCCAAAATCAAATCCATCTCCTTCCTTTGATATTTGGCAACGAACTCAAGTACCACAAGTCGACACCGAGCTCTCTCTGTCGAATAATTCAACGTCGGCAGTCGACGTTTCAGCGGATCGGTTCCGACCCATTAGAGGAATCCCAGTTTACAATAATGGGTTGTTTTCTTCTTCAAGATATTTTAACAGAAACCAACCGACATCGTCGTCGTCGCCGCCGCCACCACCGTGTTTGAGTTTTAGGTCATTTCAACAACAACAACAACAAGAAGCAGTGGGGAGGTATAATGGGATAACAATGGAGGGTTTGAGAAACCAACAGCAGAATATTATTAATCATCAAAATCAGAATCAAAATCAGTTTATTTTTCAAAATCAAGAAAGCCTTCATTTTGGGGTTTCAGATTTTTCTTGTAATTATAATAATAGTAGATCGAGATTGTTGATCCCAAGGATTCAAAGTCGAAGAAATTCTAGGGCTCCAAGGATGCGTTGGACTTCTTCTCTTCATGCTCGTTTCATTCGTGCTGTTGAGCTTCTTGGTGGCCATGAAAGTACTTTCTCTCTCTCTCTCTCTCTTTACTTCTTTCTCCCGCCGACCCTCTCGGTTTCGGTCAATAATTAAATCACCACTAAACTCAAAAACTTATAGTTGTATCTGATAGCAGGTCGAAACCCGGTCATTTAGACTTATGTGTGTTTGAAAAGTATTTCAAAGAGTAAAAACATTCAATACTGAACAGAGATTTTTGTTTGTTTTTTTTTTACGAGATTGAGCTAATGAGATTTTGAAATAGTAATTATGGTCTTATTAAATAAGCTATGTTGGAATTGGTAGGTTAAATATTGAAGAAATTGATTTATTTGTTCTTTTTTAATATGATTAGGGGCGACTCCAAAATCTGTGTTAGAGTTGATGGATGTGAAGGATCTTACTCTAGCTCATGTGAAGAGCCATTTACAGGTAATCTTATTGAAAACCCATAATTTATTTTTGAATTTTAATTGAATCCCATTTGATATCTCTTCTTCCTTGTAAAAAAAGCTTCTATTTTTATGGGTTTTTTTTTTTTCTTTAATAAAAAAGGAATCTCTGTGTCACAGTTGCCAAATAAGAGAGAAATGAATGGAAATGAAAATGAATGAATGAATGATTCAGAAGGTGAAGAAAGTCTGAATGTTGTTACAAAACAGGACAATTTCTCCTTTTAGAGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAATTGACATCATTTCTCAATAATAGAGAACCATTTCCCCAAATTTTTTACTTTCCAAACCACAAACAAAAAACAATATTATTTATTAACCCTTTTTTTTTCTCCTCACACTAACCCAAAACTAAATCCCCATTCTCAAAATCTCTAACTTTATAATTTTTCAACTCACCACAATAACCAAATCATTTCATTTCAGTTTTATTTCCAAATGGGTCACTCAAAGTTTTGATCTTTTTTATGTGTTTGTTTTTGTTAATAATAATCATAATGTTCTTAAAGTCCATTATTAGGACACAAAACTGTATATGTTTTTCCTTTTTTTTTTTTTTTTGTTCTAACTTTCATGTTTGTGTATATTTTTTAATCTGCGTGGAAAATTATATTTTGTCTTCTTTTTCAGATGTATCGTACTGTTAAAAACACCGACAAACAAACAGCTTCTTCAGGTATGAAATTCGAATTCCTTAGCAATTTCAAAAGGAAAAAAAAAAAAAATCAGATATCCTTTCTTTTCTTTCGAGTTTAATAAGAATAAAAGAGAAATTGTTCAAGTGTTTTTTTAATAAAAATTCTCCACCCACTTTAAATTCAATTTATGCCTTGTGTCTTGCATGGAAATTAATTCTCATTTGATCACACGCATACAGGATAAATATAGTACATACCAACATCGATCATCAAACAACCATACTGCAAAAACATCTTCCCTAGCCTTCAAAAACCTAGGAGACATGTTTGGCTTGAAAGACAATCACACTTTCTTTCCTCAAGTCAACCATCAAACGATCTTGTCTTCATGAAAATCAATTTAAAAAGAAAAGAAAAAATCAGACATCCTAGACAATCTCGAATCTCGAGTCTAGCCTCTAGTCACCTTTTTTTTGTTTTGTTTTTTTTTTTAAAAAAATAAGTCACTAGAGAGATAGGTGGGTGCATCAAGATATATAAACTAGATTGACACACCCCTAACACACCCTCATCATACTCCAACACCAAAACGAGTTGTCATAAACAACTCGAGTCTAGCTTCTAGTCAACTTTTGATGAGAATATTTAAAAGAGATTATCATTAACAAAGAGTTGATCCCTTTCTCTTCCATTAGTATGTTGTTAAAAAAAAAAAAAAAAACTTGATTCCAAAAGTACGAACAATTTTGGGTCGAGAGAACATACTAAATTATCACTAAACTAAGCTCACTCTTACGAATGCAAGAGAGAATTATAAAACGTTCAGTTATATTAGATGTGTGTTTCTTTAAAGACTTTAAAAGAGGGGAATTTTTGGTTGGGTGAAAATTAAGATTGTCCAACAAAAGTTAGAAATGGGAAAAAAATGTTACCTTTTTTCCCTAGGGTCTCAAATTTCTTTTTTTTTTTTTTTTTTTCCTTCTTTAATATGTGAATTTAGGGTAATTATTTAAAATAATAAAACTCTTGAAAATATTTACAAATATAGCAAAATGTTATCGTCTATCAACCGTAGTCATTGATAGACATTCACATTTTGATACATTTATAAAAAAAATTGGCTTATTTTGCTATATTTGAAAATAACTCGTAAATTTAAGGGAATAGAATGTAATATGAATCAGAAGGGTCTGGGGAAGAAGATTTCTTGCCTGCTACACCAACCCCACATCATGAAGCAAACTGTTTGCTCAATCATAGAAGAGGGTTTAGTAATGCATCTTTGGAGCCTGATGTTAATGGATCAACACCTTCCATTAATAACCATTCTAATTCTTCAAGGTTAATATTTTTCTTTCCTCTCTCCATTAATTTCTTCCTCTTTTATGTCTCTTGGTTTGGTACTATATGTTTTTTTCTTTCTTTCTTTCTTTCTTTTTTTTATTTTTATTTTTATTTATTTATTTTTTTTATTACTATTGGTAAAAAAAAAAAAAAATCAATTTTTTTGGGATATAGATCTTTTTAAAGAGCTATAAGCTTTGTTGTGACAGCTTTACTTTCCCCCCATTTCCTTTTCACCTACCACTTTTCTTTAAATAACCCCTATATTTATATCAACTAAATCTTGATGTTCATTATGTTTGTGATTTGTAAAGAGTTATTTTTTAGCCCATTTTTGTTTGATTAGTGTAAAAATTAAGTTAGTGGGTAGCATGAAATAGTAGGTTTCGTAGCTTGATAATGTATTGTATAGGTTTGAATGTAGCCTTTAATGGTCAACCCGAGCATATAGTTCATTAGACAATGTATCAATAATTATCATTTCAAAGGTAAACAGTTTCAAATCTTCCACCACTATATTTGTTGAATTCAATCAAATGTGGGGTTTGGAGATCGAACTTCTAATCTCGAACTCGTATGTTCATTTTGTCTTGATTTATATGTGTTTAATCTTCGAGCCAAACCCTACTAAAACTTATTATTTAAGTTTTTGTTTTTAGTTGTATGTTTTATGAAACATTACATTTGGTAATGTGATAAAAGAAGTGGTGTTCAAATATTTTATAAAACATAGATAAAATTGGACTTGAACACTTAAAAGCTTAGATGAACATTTCTTACAATGGGGTTATTTTTTCTAGCCAAGAAAAGATAAGGAAAAAAAATAATAATAATAAGAACCAGCTTTACACAATGATGATAATGTAAGTGGCACACAAGAAGTGCAGTCTTTTGTTAGGCCATTTTCTTTTAAAATTAGTGATATAATCAGCTTTTGTATATAGTCTCACATGCTAGCATTACCAAAAAGAGAGTATATGTTATGAAATTTGGATTTAATTTACTGCATATACTTATATATACACTATAGTTTACAATTATTGTATGCAAATGATTCAGTATCTTTGTTTATTATATAATATATAATATTTGACCTTATTTGTATTGTTCTTTCTCTGTCTACTAATTACCTAATTATTTTTATAGAGAAAATTATAACATAAGAAAATAGATAATTATGATTATGATTATGTTAATTTGATGTTTCAGAAGAGCATGGGAACAAAGCCCTCCAACAAGTGCAAATGTGTTTGGATCAGAAAATCAATCAGAGGTAAGAAGCTTTTTCACTAATGCAAATTTAATGGAAAATGGCTTTGATTTTATCTAATTTGTTATATATTCCCTCTATATGTTTATATATTCCCTATATATAGCATTTTTTATTATAAAATATATAATATTTGACGTTATTTGTTTTGCTCTTTAATACTATTTATATAATTAATGATCACTTGATCTCTAAGGCTTAACTATTTTTTAAAAAAAAATAAGTTTTTTTTTACTAACTTTGCTTTTGGAACATGTATTTTTGGAAAAATATGATTCTTTTAAGCGAAAATTTCAAAACTAAAAGTGCTCTCCTTTTATTTTTTTTTAATTATGATTATTAAAATTTTATATTTGTTTTTAAAATTTAGTAAATAAATCATAACCATTTCTTAAAAATAAAGAAAAAAAAAACCATGAAAATGATTCAATTTTCAGTTTTATGTTCTTAAAAATTAACTCCTTTATTGAAATATTATTTTGTACAACACTGTTATTTCTTTTTTTTTTTTTAAAAAAAAAACTTTTGAAAATCTTAAAAGATAAATTCTTGAAAAGTATACCATTAAATTTACTTTTTATTGTTTTTTTTAATAATTTGATCAGAGAATGCTGACAATATTTCCTAAAAGTAATTTACTACCCTTAAACATGCACAAATTTCCAAAAAATACATAAAATAAGAAACAAAACTGAAAAAAAAAAAACCCAATAAACAATTTAAAATTTTACTAACAAAACATATCTCAATTTTTCAATTGTTCATTTTATTAAATTTTATGGTTACCTTCGAAATTTTTTTTTGTTATATTGTAATATCATACTCAAATATCAAATATCACATCACAAGTAAGTACGAACTCAACTCGAACAATTCAACATATAAACAACATAATCCATCTTCTTCTTTTTTTCAGGAATGCTATGAGCTGTTAGGTCATCCAAATAGTTTGATGGGGTTGAATCTAAATTTGAACAGTCCAAGCAAGGAGTTATCTATGAAACACAATTGGAACAACTAA ATGTTGGAGAAAGGCATTATTGTTCCTGATCTATCTCTTCAAATTAGCCCTCCAAAATCAAATCCATCTCCTTCCTTTGATATTTGGCAACGAACTCAAGTACCACAAGTCGACACCGAGCTCTCTCTGTCGAATAATTCAACGTCGGCAGTCGACGTTTCAGCGGATCGGTTCCGACCCATTAGAGGAATCCCAGTTTACAATAATGGGTTGTTTTCTTCTTCAAGATATTTTAACAGAAACCAACCGACATCGTCGTCGTCGCCGCCGCCACCACCGTGTTTGAGTTTTAGGTCATTTCAACAACAACAACAACAAGAAGCAGTGGGGAGGTATAATGGGATAACAATGGAGGGTTTGAGAAACCAACAGCAGAATATTATTAATCATCAAAATCAGAATCAAAATCAGTTTATTTTTCAAAATCAAGAAAGCCTTCATTTTGGGGTTTCAGATTTTTCTTGTAATTATAATAATAGTAGATCGAGATTGTTGATCCCAAGGATTCAAAGTCGAAGAAATTCTAGGGCTCCAAGGATGCGTTGGACTTCTTCTCTTCATGCTCGTTTCATTCGTGCTGTTGAGCTTCTTGGTGGCCATGAAAGGGCGACTCCAAAATCTGTGTTAGAGTTGATGGATGTGAAGGATCTTACTCTAGCTCATGTGAAGAGCCATTTACAGATGTATCGTACTGTTAAAAACACCGACAAACAAACAGCTTCTTCAGAAGGGTCTGGGGAAGAAGATTTCTTGCCTGCTACACCAACCCCACATCATGAAGCAAACTGTTTGCTCAATCATAGAAGAGGGTTTAGTAATGCATCTTTGGAGCCTGATGTTAATGGATCAACACCTTCCATTAATAACCATTCTAATTCTTCAAGAAGAGCATGGGAACAAAGCCCTCCAACAAGTGCAAATGTGTTTGGATCAGAAAATCAATCAGAGGAATGCTATGAGCTGTTAGGTCATCCAAATAGTTTGATGGGGTTGAATCTAAATTTGAACAGTCCAAGCAAGGAGTTATCTATGAAACACAATTGGAACAACTAA ATGTTGGAGAAAGGCATTATTGTTCCTGATCTATCTCTTCAAATTAGCCCTCCAAAATCAAATCCATCTCCTTCCTTTGATATTTGGCAACGAACTCAAGTACCACAAGTCGACACCGAGCTCTCTCTGTCGAATAATTCAACGTCGGCAGTCGACGTTTCAGCGGATCGGTTCCGACCCATTAGAGGAATCCCAGTTTACAATAATGGGTTGTTTTCTTCTTCAAGATATTTTAACAGAAACCAACCGACATCGTCGTCGTCGCCGCCGCCACCACCGTGTTTGAGTTTTAGGTCATTTCAACAACAACAACAACAAGAAGCAGTGGGGAGGTATAATGGGATAACAATGGAGGGTTTGAGAAACCAACAGCAGAATATTATTAATCATCAAAATCAGAATCAAAATCAGTTTATTTTTCAAAATCAAGAAAGCCTTCATTTTGGGGTTTCAGATTTTTCTTGTAATTATAATAATAGTAGATCGAGATTGTTGATCCCAAGGATTCAAAGTCGAAGAAATTCTAGGGCTCCAAGGATGCGTTGGACTTCTTCTCTTCATGCTCGTTTCATTCGTGCTGTTGAGCTTCTTGGTGGCCATGAAAGGGCGACTCCAAAATCTGTGTTAGAGTTGATGGATGTGAAGGATCTTACTCTAGCTCATGTGAAGAGCCATTTACAGATGTATCGTACTGTTAAAAACACCGACAAACAAACAGCTTCTTCAGAAGGGTCTGGGGAAGAAGATTTCTTGCCTGCTACACCAACCCCACATCATGAAGCAAACTGTTTGCTCAATCATAGAAGAGGGTTTAGTAATGCATCTTTGGAGCCTGATGTTAATGGATCAACACCTTCCATTAATAACCATTCTAATTCTTCAAGAAGAGCATGGGAACAAAGCCCTCCAACAAGTGCAAATGTGTTTGGATCAGAAAATCAATCAGAGGAATGCTATGAGCTGTTAGGTCATCCAAATAGTTTGATGGGGTTGAATCTAAATTTGAACAGTCCAAGCAAGGAGTTATCTATGAAACACAATTGGAACAACTAA MLEKGIIVPDLSLQISPPKSNPSPSFDIWQRTQVPQVDTELSLSNNSTSAVDVSADRFRPIRGIPVYNNGLFSSSRYFNRNQPTSSSSPPPPPCLSFRSFQQQQQQEAVGRYNGITMEGLRNQQQNIINHQNQNQNQFIFQNQESLHFGVSDFSCNYNNSRSRLLIPRIQSRRNSRAPRMRWTSSLHARFIRAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKNTDKQTASSEGSGEEDFLPATPTPHHEANCLLNHRRGFSNASLEPDVNGSTPSINNHSNSSRRAWEQSPPTSANVFGSENQSEECYELLGHPNSLMGLNLNLNSPSKELSMKHNWNN Homology
BLAST of ClCG04G010420 vs. NCBI nr
Match: XP_038895115.1 (transcription repressor KAN1-like isoform X1 [Benincasa hispida]) HSP 1 Score: 595.9 bits (1535), Expect = 2.3e-166 Identity = 310/352 (88.07%), Postives = 329/352 (93.47%), Query Frame = 0
BLAST of ClCG04G010420 vs. NCBI nr
Match: XP_038895116.1 (transcription repressor KAN1-like isoform X2 [Benincasa hispida]) HSP 1 Score: 589.7 bits (1519), Expect = 1.6e-164 Identity = 309/352 (87.78%), Postives = 328/352 (93.18%), Query Frame = 0
BLAST of ClCG04G010420 vs. NCBI nr
Match: XP_011650937.1 (transcription repressor KAN1 isoform X1 [Cucumis sativus] >KGN64196.1 hypothetical protein Csa_013976 [Cucumis sativus]) HSP 1 Score: 570.5 bits (1469), Expect = 1.0e-158 Identity = 310/361 (85.87%), Postives = 324/361 (89.75%), Query Frame = 0
BLAST of ClCG04G010420 vs. NCBI nr
Match: XP_008467044.1 (PREDICTED: transcription repressor KAN1-like isoform X1 [Cucumis melo]) HSP 1 Score: 570.5 bits (1469), Expect = 1.0e-158 Identity = 306/359 (85.24%), Postives = 326/359 (90.81%), Query Frame = 0
BLAST of ClCG04G010420 vs. NCBI nr
Match: XP_011650938.1 (transcription repressor KAN1 isoform X2 [Cucumis sativus]) HSP 1 Score: 563.9 bits (1452), Expect = 9.5e-157 Identity = 309/361 (85.60%), Postives = 323/361 (89.47%), Query Frame = 0
BLAST of ClCG04G010420 vs. ExPASy Swiss-Prot
Match: Q93WJ9 (Transcription repressor KAN1 OS=Arabidopsis thaliana OX=3702 GN=KAN1 PE=1 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.8e-36 Identity = 113/259 (43.63%), Postives = 149/259 (57.53%), Query Frame = 0
BLAST of ClCG04G010420 vs. ExPASy Swiss-Prot
Match: Q9C616 (Probable transcription factor KAN2 OS=Arabidopsis thaliana OX=3702 GN=KAN2 PE=2 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 6.4e-31 Identity = 86/189 (45.50%), Postives = 100/189 (52.91%), Query Frame = 0
BLAST of ClCG04G010420 vs. ExPASy Swiss-Prot
Match: Q0J235 (Probable transcription factor RL9 OS=Oryza sativa subsp. japonica OX=39947 GN=RL9 PE=2 SV=2) HSP 1 Score: 128.6 bits (322), Expect = 1.3e-28 Identity = 93/231 (40.26%), Postives = 118/231 (51.08%), Query Frame = 0
BLAST of ClCG04G010420 vs. ExPASy Swiss-Prot
Match: Q941I2 (Probable transcription factor KAN3 OS=Arabidopsis thaliana OX=3702 GN=KAN3 PE=2 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 3.4e-24 Identity = 104/352 (29.55%), Postives = 167/352 (47.44%), Query Frame = 0
BLAST of ClCG04G010420 vs. ExPASy Swiss-Prot
Match: Q9FJV5 (Probable transcription factor KAN4 OS=Arabidopsis thaliana OX=3702 GN=KAN4 PE=1 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 3.4e-24 Identity = 83/209 (39.71%), Postives = 110/209 (52.63%), Query Frame = 0
BLAST of ClCG04G010420 vs. ExPASy TrEMBL
Match: A0A0A0LVX9 (SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G043000 PE=4 SV=1) HSP 1 Score: 570.5 bits (1469), Expect = 4.9e-159 Identity = 310/361 (85.87%), Postives = 324/361 (89.75%), Query Frame = 0
BLAST of ClCG04G010420 vs. ExPASy TrEMBL
Match: A0A1S3CSL4 (transcription repressor KAN1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504451 PE=4 SV=1) HSP 1 Score: 570.5 bits (1469), Expect = 4.9e-159 Identity = 306/359 (85.24%), Postives = 326/359 (90.81%), Query Frame = 0
BLAST of ClCG04G010420 vs. ExPASy TrEMBL
Match: A0A1S3CSQ3 (transcription repressor KAN1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504451 PE=4 SV=1) HSP 1 Score: 563.9 bits (1452), Expect = 4.6e-157 Identity = 305/359 (84.96%), Postives = 325/359 (90.53%), Query Frame = 0
BLAST of ClCG04G010420 vs. ExPASy TrEMBL
Match: A0A6J1KJM5 (transcription repressor KAN1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495831 PE=4 SV=1) HSP 1 Score: 502.3 bits (1292), Expect = 1.7e-138 Identity = 273/350 (78.00%), Postives = 295/350 (84.29%), Query Frame = 0
BLAST of ClCG04G010420 vs. ExPASy TrEMBL
Match: A0A6J1KRL3 (transcription repressor KAN1-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111495831 PE=4 SV=1) HSP 1 Score: 496.1 bits (1276), Expect = 1.2e-136 Identity = 272/350 (77.71%), Postives = 294/350 (84.00%), Query Frame = 0
BLAST of ClCG04G010420 vs. TAIR 10
Match: AT5G16560.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 154.8 bits (390), Expect = 1.2e-37 Identity = 113/259 (43.63%), Postives = 149/259 (57.53%), Query Frame = 0
BLAST of ClCG04G010420 vs. TAIR 10
Match: AT1G32240.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 136.3 bits (342), Expect = 4.6e-32 Identity = 86/189 (45.50%), Postives = 100/189 (52.91%), Query Frame = 0
BLAST of ClCG04G010420 vs. TAIR 10
Match: AT4G17695.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 114.0 bits (284), Expect = 2.4e-25 Identity = 104/352 (29.55%), Postives = 167/352 (47.44%), Query Frame = 0
BLAST of ClCG04G010420 vs. TAIR 10
Match: AT5G42630.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 114.0 bits (284), Expect = 2.4e-25 Identity = 83/209 (39.71%), Postives = 110/209 (52.63%), Query Frame = 0
BLAST of ClCG04G010420 vs. TAIR 10
Match: AT5G42630.2 (Homeodomain-like superfamily protein ) HSP 1 Score: 113.2 bits (282), Expect = 4.1e-25 Identity = 70/133 (52.63%), Postives = 85/133 (63.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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