ClCG04G006290 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG04G006290
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Thioredoxin domain-containing protein
Location	CG_Chr04: 20775153 .. 20779047 (+)
RNA-Seq Expression	ClCG04G006290
Synteny	ClCG04G006290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCTCTGTTTTTATATGAAATTCAAAGTCTCCATTTTTACCACAGCCAACGCGCCTTGGAACGCGAAGAAAAGTCAAAATCCAAAATCTAGGGCAATTTCCCTTTTCCGATTCCAAATTTGAGAAAGTGAAAGACAGATCCTTCAAAATTTTCAATTCCCCAAGTTTTCCGATCATCGTTGTTAACCTACTGTTTTTGAGGTTCAGTTCCGTCGTCTTTATCCCCTCCGATTTCACCATTTTCCGAATACCTTTTCTTCAAAATCAATATCCAGAATAATTTTCTTCCACGAACCCCTTGTGGGTTTTTTTCCTCCACGATTTCTTGATGCCATCATCCCTCCGCGGACTACTGAATTGACTCGAGGCTCCAATTCGGGGGTTCTTGAGGGTAATTTTCTGTTTCTTTAATGGGATTCTGCTTTACTCGGTTTGAATTATTCTTCAGTGGTTTGTTTATGAATCTGATTGAGATGGGTTACTGCGTCTTCTTCAATTCTATTTGTATCTGTCTATTGTGGAACGTAGAATTGGGGAAAAGTTGAGAAGTTTTCTGCCCATGATTTTATTCTGTTCCTTTCTGTGCAGTTCCCTTTTACTTTACTCAGGGAATCGTATTTCTTTGCTTTACCATTTGTCTAAAGTTTGAATGATACGATCATCGGTCCCTTATTTGTTTGTTAGTTGATTAACGAACTTTGAAATTGACACGAGTGAGGTCCTTGCGGTTTGTCAGGGTTTTAACTGTTAAGGTTATTATGTCACTGTGACAAAAGTAGAACTAGTCTTCCTTTAGTGTCTCTTTCCCAGAATTTATAACATATCTATGAATTGGAAATATTTGAAATAGAAAAAGAGTTGAATGTTATGTTTTCTTCCATTGATAGCTTATGGTTATGCTCATAATTTTTTCCTTTTTTCAGGCTAACCTGTGATACGTAGAACGCATTAAAAATCTGCACCGGGACCGTCAAATGGGACTTTGCGCTAGTAAGGTAAGAGTTGTATAGAACTTTTAATCTAGTGACGTTAGTAGAGTAGTTTTTGGTGGTTTGTGATTTTCATGTTGTGTTGGTATTTGTACCTGGAGCTTGTTTTAAGCAATTGTGAAACCTGTAATAGAGTGTGAATCATGATAAATATGGATCAGGCCGAAGTTGTGAATTTAACATTGATGAATGATGATTAAGAGGGAATGATTAACTGTGGACCATAAATGAACAGGCCAAAGAAGCTGGCTGGGACCCGGCTTTGTGGGGTTCAGAAGAGGACTATATATAAATGCTTGGCCTGTTAATTGGAATATTTGGTTTGTAATTTTGATTTATTAATTTTCAATCCATTTAAACAATATTATATTGGGTAATAATATTCTGATGGTTTTTCTTTGTCGCTTAAAAAATAAGGTTGTTACTTTTATCATCATCTCAATTATGCATGGATATTGGTGAAGATGGTGCTTTATCATCTTTAGCATTACACCAAAGGTTTCTATTTATTGAATCTTTGGCAGGAAATGTATAACTGTAGAAATGCTATTTATGTATGAATCTATGATTCAAGTCCTGACTTCAGCAATGACCCCCAAATTTTTTATTCTACCTGAGTTTGCATTATTAGCTTATCAGCATCTACTCTTCTTTTTTTTTTTTTTTCTCCCTCTCCTCTTTATGTAATTTTGTGTTGATGACCCTATAATAAAAACCATATGTCGAGAAACTTGGTGATAACTGTATAAATATTTGAAGGCGAAGAAAAAAGATTCTTGTTTCTGACATTTTGACTTGCTGCCTGTTTTATGTGAGCATTAACATTCATCTAACTGGGAAGTTATTATGTTCTCTGTTTCTAGCCCGAAGCCAGAGACGATGATTCTGAGCATCATGTTGAGTTTTCTGCTGGAAATGTGCATCTCATCACAACCAAAGAAGCATGGGACCAAAAGTTGGAAGAAGCTAATACGGGTGGCAAAATTGTAAGATTTTCATTAGCTTATATTCTTGAGTTATAGATACGCAGTGTTTTAGTTAATTTGTTTGATCAATTGAGCAAAATAAAGAGAAAAATTAGAAAAAATAGATCGATTGAGAAAATTAAAATATTCAGTTGCTAAGCTATGTAATCGCTGCAACTTCTTCAAGCCCTGCTGTCGTTTTTAGATTAGCTCATAGATTGATCAGGCTTGTTTTTCAGAAACCAAAGTTGTAGGAGAAAGAAATTTATGCACTTGTGCAGTTATGTTGATGCCGATTCTGCTTTCCGCATAATCTTAAGGAATGTCATCGTTCTTGCTTCGTCAACTTTGTTCATAATTATGTTTTGTTTTTCACATATCGACGACTGAGATTTGGATGGTGCTTAATTTGGTGGAAACTTCAGATAGCTGATTTAAATAGTTAAATAAGCCTTTGATGACGGAGAGTTGGATGGTATGATGTTGGCTTCATTGATTAAGGTTTGAACTTGAGCAATATAGTTATAGGAACAAAACACTTGGACCTCTTACCGCAGTGCCCTCCGACATGGGAATGATTTAAGATCTTTTTATTTGTGTTTCGAATTTTGGTACTGTGAATCATTGAAGATCTTTGTGCATTCAAATTTCCATCTTGATCATGAAATTAACTAAGAGGGAATCAGTAGTTTTCTTTTGGTATGTATATCTTAAATTTTGTTTTAATCATTTGAGTACTCTCGGGAGAAAATACTAATTTGCATTCTTTAATTATCTGATGAAATTGAAATGACACAGATAATTTAATAAATAGTTTGCTTTCTGTCATGCCTTCATTTTATTACTCAGTTCTATGCAAGGGAGGCTGCCATGATCCTCCCTTACTTTTGGTAATGAAAATCCTCTATCAAAATTCTATATCTAGTCATCTCATTCAATTCCTGCTTGTGTTCCTTAACCCACTTTCAGCATATCTATTTTTATAGACAATGGGTTCAATCCTTTCATAATCCAGATTATGCATTGACAGGTGATAGCGAACTTCAGTGCAACATGGTGTGGTCCTTGCAAGATGGTTGCTCCATTCTACAGCGAATTGTCAGAGAAACACCCGTCTTTGATGTTCCTAGTAGTCGATGTTGATGAATTAACCGTGAGTAGTGAAGTACAATATCATTTATGGAAGATTTTGTTCACTCTTTTCACTCATTCATCCAAACTGTTGAGACATTCAACTGAAATTATATTTGATATACGACCTTACTTGAACAAGATCTGTTCTATAGGTTGTATAACGTGTCCATGAGTTCTAAAACAAAACATATCTTTGATGTTCAATTGGTCGGTTGTCTGCTAACTGCTCGATTTAATTGAAATGCATTCCTTGTCAATCCGAGCATAGCTCGGTGAATAAGGCACTCATTACCATCTGAAAGGCGGATAGCTCGATCCTCCAACTATGCAATTGTTGAACTAAAAAAAGAAAAAAGGAAAAAAATACAATGGTTCTTGCTATGAGTTCAGCACCCTTCCACTACCCAGGACCAGGAAGTTCGATGCAAAGGGCGAAGCATTCCATGTTCAATAAGTTTATTCTGCTGTTATGGAATGTCCTCTGAAAATTTTACTGAATTGAAGTTTCTCTATGCTCTTCTCATTTTGATATAATTCACTTCCCTCCACATTCACTTCTTCATTAGATGTGTCATTAAGATGATAATTATATGTGTTATAGGTTCATTCTCGTTTGGCCTACAACATTTATCAGCATGTTTTGGTGTTTTTGCAGGACTTCAGCACTTCTTGGGATATCAAAGCTACACCTACATTTTTCTTCCTCAAAGAAGGACAGCAAATCGACAAGCTCGTCGGAGCGAATAAAATCGAACTAGAGCGGAAAATTACTGCAATGGCGGATTCTCTTCCTCCCAATCGGACATGA

mRNA sequence

GTCTCTGTTTTTATATGAAATTCAAAGTCTCCATTTTTACCACAGCCAACGCGCCTTGGAACGCGAAGAAAAGTCAAAATCCAAAATCTAGGGCAATTTCCCTTTTCCGATTCCAAATTTGAGAAAGTGAAAGACAGATCCTTCAAAATTTTCAATTCCCCAAGTTTTCCGATCATCGTTGTTAACCTACTGTTTTTGAGGTTCAGTTCCGTCGTCTTTATCCCCTCCGATTTCACCATTTTCCGAATACCTTTTCTTCAAAATCAATATCCAGAATAATTTTCTTCCACGAACCCCTTGTGGGTTTTTTTCCTCCACGATTTCTTGATGCCATCATCCCTCCGCGGACTACTGAATTGACTCGAGGCTCCAATTCGGGGGTTCTTGAGGGCTAACCTGTGATACGTAGAACGCATTAAAAATCTGCACCGGGACCGTCAAATGGGACTTTGCGCTAGTAAGCCCGAAGCCAGAGACGATGATTCTGAGCATCATGTTGAGTTTTCTGCTGGAAATGTGCATCTCATCACAACCAAAGAAGCATGGGACCAAAAGTTGGAAGAAGCTAATACGGGTGGCAAAATTGTGATAGCGAACTTCAGTGCAACATGGTGTGGTCCTTGCAAGATGGTTGCTCCATTCTACAGCGAATTGTCAGAGAAACACCCGTCTTTGATGTTCCTAGTAGTCGATGTTGATGAATTAACCGTTCATTCTCGTTTGGCCTACAACATTTATCAGCATGTTTTGGTGTTTTTGCAGGACTTCAGCACTTCTTGGGATATCAAAGCTACACCTACATTTTTCTTCCTCAAAGAAGGACAGCAAATCGACAAGCTCGTCGGAGCGAATAAAATCGAACTAGAGCGGAAAATTACTGCAATGGCGGATTCTCTTCCTCCCAATCGGACATGA

Coding sequence (CDS)

ATGGGACTTTGCGCTAGTAAGCCCGAAGCCAGAGACGATGATTCTGAGCATCATGTTGAGTTTTCTGCTGGAAATGTGCATCTCATCACAACCAAAGAAGCATGGGACCAAAAGTTGGAAGAAGCTAATACGGGTGGCAAAATTGTGATAGCGAACTTCAGTGCAACATGGTGTGGTCCTTGCAAGATGGTTGCTCCATTCTACAGCGAATTGTCAGAGAAACACCCGTCTTTGATGTTCCTAGTAGTCGATGTTGATGAATTAACCGTTCATTCTCGTTTGGCCTACAACATTTATCAGCATGTTTTGGTGTTTTTGCAGGACTTCAGCACTTCTTGGGATATCAAAGCTACACCTACATTTTTCTTCCTCAAAGAAGGACAGCAAATCGACAAGCTCGTCGGAGCGAATAAAATCGAACTAGAGCGGAAAATTACTGCAATGGCGGATTCTCTTCCTCCCAATCGGACATGA

Protein sequence

MGLCASKPEARDDDSEHHVEFSAGNVHLITTKEAWDQKLEEANTGGKIVIANFSATWCGPCKMVAPFYSELSEKHPSLMFLVVDVDELTVHSRLAYNIYQHVLVFLQDFSTSWDIKATPTFFFLKEGQQIDKLVGANKIELERKITAMADSLPPNRT

Homology

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BLAST of ClCG04G006290 vs. NCBI nr
Match: XP_038883656.1 (thioredoxin H9 [Benincasa hispida] >XP_038883657.1 thioredoxin H9 [Benincasa hispida])

HSP 1 Score: 262.7 bits (670), Expect = 2.0e-66
Identity = 130/157 (82.80%), Postives = 135/157 (85.99%), Query Frame = 0


Query: 1   MGLCASKPEARDDDSEHHVEFSAGNVHLITTKEAWDQKLEEANTGGKIVIANFSATWCGP 60
           MGLCASK E RDD+SEHHVEF+AGNVHLITTK+AWDQKLEEANTGGKIVIANFSATWCGP
Sbjct: 1   MGLCASKSETRDDESEHHVEFAAGNVHLITTKDAWDQKLEEANTGGKIVIANFSATWCGP 60

Query: 61  CKMVAPFYSELSEKHPSLMFLVVDVDELTVHSRLAYNIYQHVLVFLQDFSTSWDIKATPT 120
           CKMVAPFYSELSEKHPSLMFLVVDVDELT                  DFSTSWDIKATPT
Sbjct: 61  CKMVAPFYSELSEKHPSLMFLVVDVDELT------------------DFSTSWDIKATPT 120

Query: 121 FFFLKEGQQIDKLVGANKIELERKITAMADSLPPNRT 158
           FFFLK GQQIDKLVGANKIELE+KITAMADSLP N+T
Sbjct: 121 FFFLKGGQQIDKLVGANKIELEKKITAMADSLPANQT 139

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BLAST of ClCG04G006290 vs. NCBI nr
Match: XP_008463273.1 (PREDICTED: thioredoxin H-type [Cucumis melo] >KAA0025417.1 thioredoxin H-type [Cucumis melo var. makuwa] >TYK09755.1 thioredoxin H-type [Cucumis melo var. makuwa])

HSP 1 Score: 254.6 bits (649), Expect = 5.6e-64
Identity = 126/156 (80.77%), Postives = 132/156 (84.62%), Query Frame = 0


Query: 1   MGLCASKPEARDDDSEHHVEFSAGNVHLITTKEAWDQKLEEANTGGKIVIANFSATWCGP 60
           MGLC SK E RDDDSEHHVEF+AGNVHLITTKE+WDQKLEEANT GKIVIANFSATWCGP
Sbjct: 1   MGLCFSKSETRDDDSEHHVEFAAGNVHLITTKESWDQKLEEANTSGKIVIANFSATWCGP 60

Query: 61  CKMVAPFYSELSEKHPSLMFLVVDVDELTVHSRLAYNIYQHVLVFLQDFSTSWDIKATPT 120
           CK+VAPFYSELSEK+ SLMFLVVDVDELT                  DFSTSWDIKATPT
Sbjct: 61  CKVVAPFYSELSEKYESLMFLVVDVDELT------------------DFSTSWDIKATPT 120

Query: 121 FFFLKEGQQIDKLVGANKIELERKITAMADSLPPNR 157
           FFFLKEGQQIDKLVGANKIELE+KI A+ADSLPPNR
Sbjct: 121 FFFLKEGQQIDKLVGANKIELEKKIIAVADSLPPNR 138

[Close]

BLAST of ClCG04G006290 vs. NCBI nr
Match: XP_004142678.1 (thioredoxin H-type isoform X1 [Cucumis sativus] >KGN54459.1 hypothetical protein Csa_011943 [Cucumis sativus])

HSP 1 Score: 253.4 bits (646), Expect = 1.2e-63
Identity = 125/156 (80.13%), Postives = 132/156 (84.62%), Query Frame = 0


Query: 1   MGLCASKPEARDDDSEHHVEFSAGNVHLITTKEAWDQKLEEANTGGKIVIANFSATWCGP 60
           MGLC SK E +DDDS+HHVEF+AG VHLITTKEAWDQKLEEANT GKIVIANFSATWCGP
Sbjct: 1   MGLCFSKAETKDDDSDHHVEFAAGKVHLITTKEAWDQKLEEANTSGKIVIANFSATWCGP 60

Query: 61  CKMVAPFYSELSEKHPSLMFLVVDVDELTVHSRLAYNIYQHVLVFLQDFSTSWDIKATPT 120
           CK+VAPFYSELSEK+ SLMFLVVDVDELT                  DFSTSWDIKATPT
Sbjct: 61  CKVVAPFYSELSEKYESLMFLVVDVDELT------------------DFSTSWDIKATPT 120

Query: 121 FFFLKEGQQIDKLVGANKIELERKITAMADSLPPNR 157
           FFFLKEGQQIDKLVGANKIELE+KITA+ADSLPPNR
Sbjct: 121 FFFLKEGQQIDKLVGANKIELEKKITAVADSLPPNR 138

[Close]

BLAST of ClCG04G006290 vs. NCBI nr
Match: XP_022144072.1 (thioredoxin H9 [Momordica charantia])

HSP 1 Score: 243.4 bits (620), Expect = 1.3e-60
Identity = 118/152 (77.63%), Postives = 129/152 (84.87%), Query Frame = 0


Query: 1   MGLCASKPEARDDDSEHHVEFSAGNVHLITTKEAWDQKLEEANTGGKIVIANFSATWCGP 60
           MGLC+SKPE RDD+ E+HVEFSAGNVHL+TTKEAWD+KL EA+ GGKIV+ANFSATWCGP
Sbjct: 1   MGLCSSKPETRDDEPENHVEFSAGNVHLVTTKEAWDEKLAEASRGGKIVVANFSATWCGP 60

Query: 61  CKMVAPFYSELSEKHPSLMFLVVDVDELTVHSRLAYNIYQHVLVFLQDFSTSWDIKATPT 120
           CKM+APFYSELSEK+PSLMFLVVDVDELT                  DFSTSWDIKATPT
Sbjct: 61  CKMIAPFYSELSEKYPSLMFLVVDVDELT------------------DFSTSWDIKATPT 120

Query: 121 FFFLKEGQQIDKLVGANKIELERKITAMADSL 153
           FFFLKEGQQIDKLVGANK EL+RKITAMADS+
Sbjct: 121 FFFLKEGQQIDKLVGANKPELQRKITAMADSV 134

[Close]

BLAST of ClCG04G006290 vs. NCBI nr
Match: KAG7033711.1 (hypothetical protein SDJN02_03436, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 242.7 bits (618), Expect = 2.2e-60
Identity = 118/156 (75.64%), Postives = 130/156 (83.33%), Query Frame = 0


Query: 1   MGLCASKPEARDDDSEHHVEFSAGNVHLITTKEAWDQKLEEANTGGKIVIANFSATWCGP 60
           MGLCASK E +DD+SEHHVEF+ GNV LITTKEAW+QK+EEAN  GKIVIANFSA+WCGP
Sbjct: 1   MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGP 60

Query: 61  CKMVAPFYSELSEKHPSLMFLVVDVDELTVHSRLAYNIYQHVLVFLQDFSTSWDIKATPT 120
           CK+VAPFYSELSEK+PSLMFLVVDVDELT                  DFST+WDIKATPT
Sbjct: 61  CKVVAPFYSELSEKYPSLMFLVVDVDELT------------------DFSTTWDIKATPT 120

Query: 121 FFFLKEGQQIDKLVGANKIELERKITAMADSLPPNR 157
           FFFLKEGQQIDKLVGANK ELE K+TA+ADSLPPN+
Sbjct: 121 FFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ 138

[Close]

BLAST of ClCG04G006290 vs. ExPASy Swiss-Prot
Match: Q9C9Y6 (Thioredoxin H9 OS=Arabidopsis thaliana OX=3702 GN=TRX9 PE=1 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 3.0e-52
Identity = 102/153 (66.67%), Postives = 118/153 (77.12%), Query Frame = 0


Query: 1   MGLCASKPEARDDDSEHHVEFSAGNVHLITTKEAWDQKLEEANTGGKIVIANFSATWCGP 60
           MG C SK +  DDDS H+VEFS GNVHLITTKE+WD KL EA+  GKIV+ANFSATWCGP
Sbjct: 1   MGSCVSKGKG-DDDSVHNVEFSGGNVHLITTKESWDDKLAEADRDGKIVVANFSATWCGP 60

Query: 61  CKMVAPFYSELSEKHPSLMFLVVDVDELTVHSRLAYNIYQHVLVFLQDFSTSWDIKATPT 120
           CK+VAPF+ ELSEKH SLMFL+VDVDEL+                  DFS+SWDIKATPT
Sbjct: 61  CKIVAPFFIELSEKHSSLMFLLVDVDELS------------------DFSSSWDIKATPT 120

Query: 121 FFFLKEGQQIDKLVGANKIELERKITAMADSLP 154
           FFFLK GQQI KLVGANK EL++K+T++ DS+P
Sbjct: 121 FFFLKNGQQIGKLVGANKPELQKKVTSIIDSVP 134

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BLAST of ClCG04G006290 vs. ExPASy Swiss-Prot
Match: P85801 (Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 3.9e-52
Identity = 98/155 (63.23%), Postives = 115/155 (74.19%), Query Frame = 0


Query: 1   MGLCASKPEARDDDSEHHVEFSAGNVHLITTKEAWDQKLEEANTGGKIVIANFSATWCGP 60
           MGLC +K     DD E H+E + GNVHLITTKE WDQKL EA+  GKIV+ANFSA WCGP
Sbjct: 1   MGLCLAKRNHDADDDEPHIELAGGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGP 60

Query: 61  CKMVAPFYSELSEKHPSLMFLVVDVDELTVHSRLAYNIYQHVLVFLQDFSTSWDIKATPT 120
           CK +AP+Y ELSE +PSLMFLV+DVDEL+                  DFS SW+IKATPT
Sbjct: 61  CKQIAPYYIELSENYPSLMFLVIDVDELS------------------DFSASWEIKATPT 120

Query: 121 FFFLKEGQQIDKLVGANKIELERKITAMADSLPPN 156
           FFFL++GQQ+DKLVGANK EL +KITA+ DSLPP+
Sbjct: 121 FFFLRDGQQVDKLVGANKPELHKKITAILDSLPPS 137

[Close]

BLAST of ClCG04G006290 vs. ExPASy Swiss-Prot
Match: Q9AS75 (Thioredoxin H4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0168200 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 8.7e-44
Identity = 83/151 (54.97%), Postives = 104/151 (68.87%), Query Frame = 0


Query: 1   MGLCASKPEARDDDSEHHVEFSAGNVHLITTKEAWDQKLEEANTGGKIVIANFSATWCGP 60
           MG C  K  +   D E  ++F  GNVH+I+ KE WD K+ EAN  GKIVIANFSA WCGP
Sbjct: 1   MGSCVGKERS---DEEDKIDFKGGNVHVISNKENWDHKIAEANKDGKIVIANFSAAWCGP 60

Query: 61  CKMVAPFYSELSEKHPSLMFLVVDVDELTVHSRLAYNIYQHVLVFLQDFSTSWDIKATPT 120
           C+++AP Y+E+S+ +P  MFL +DVDE                  L DFS+SWDI+ATPT
Sbjct: 61  CRVIAPVYAEMSQTYPQFMFLTIDVDE------------------LMDFSSSWDIRATPT 120

Query: 121 FFFLKEGQQIDKLVGANKIELERKITAMADS 152
           FFFLK G+Q+DKLVGANK ELE+K+ A+ADS
Sbjct: 121 FFFLKNGEQVDKLVGANKPELEKKVAALADS 130

[Close]

BLAST of ClCG04G006290 vs. ExPASy Swiss-Prot
Match: Q0DKF1 (Thioredoxin H4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0169000 PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 3.6e-42
Identity = 81/150 (54.00%), Postives = 106/150 (70.67%), Query Frame = 0


Query: 1   MGLCASKPEARDDDSEHHVEFSAGNVHLITTKEAWDQKLEEANTGGKIVIANFSATWCGP 60
           MG C  K   R    E  ++F  GNVH+IT+KE WD+K+EEAN  GKIV+ANFSA+WCGP
Sbjct: 1   MGGCVGK--GRRHIEEDKLDFKGGNVHVITSKEDWDRKIEEANKDGKIVVANFSASWCGP 60

Query: 61  CKMVAPFYSELSEKHPSLMFLVVDVDELTVHSRLAYNIYQHVLVFLQDFSTSWDIKATPT 120
           C+++AP Y+E+S+ +P LMFL +DVD+                  L DFS+SWDI+ATPT
Sbjct: 61  CRVIAPIYAEMSKTYPQLMFLTIDVDD------------------LMDFSSSWDIRATPT 120

Query: 121 FFFLKEGQQIDKLVGANKIELERKITAMAD 151
           FFF+K  +Q+DKLVGANK ELE+K+ A+AD
Sbjct: 121 FFFIKNEKQVDKLVGANKPELEKKVQALAD 130

[Close]

BLAST of ClCG04G006290 vs. ExPASy Swiss-Prot
Match: Q9LXZ8 (Putative thioredoxin H10 OS=Arabidopsis thaliana OX=3702 GN=At3g56420 PE=3 SV=2)

HSP 1 Score: 124.0 bits (310), Expect = 1.5e-27
Identity = 56/129 (43.41%), Postives = 82/129 (63.57%), Query Frame = 0


Query: 22  SAGNVHLITTKEAWDQKLEEANTGGKIVIANFSATWCGPCKMVAPFYSELSEKHPSLMFL 81
           S G VH ++  E W++K+ EAN  GKI++ NFSA WC PCK + P + +L+ ++PS++F+
Sbjct: 38  SKGKVHPVSRIEKWEEKITEANNHGKILVVNFSAPWCVPCKKIEPVFRDLASRYPSMIFV 97

Query: 82  VVDVDELTVHSRLAYNIYQHVLVFLQDFSTSWDIKATPTFFFLKEGQQIDKLVGANKIEL 141
            VDV+EL                   +FS  W+++ATPT  FLK+G+Q+DKLVGA   EL
Sbjct: 98  TVDVEELA------------------EFSNEWNVEATPTVVFLKDGRQMDKLVGAETSEL 148

Query: 142 ERKITAMAD 151
           ++K  A AD
Sbjct: 158 QKKTAAAAD 148

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BLAST of ClCG04G006290 vs. ExPASy TrEMBL
Match: A0A5A7SL29 (Thioredoxin H-type OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G00370 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.7e-64
Identity = 126/156 (80.77%), Postives = 132/156 (84.62%), Query Frame = 0


Query: 1   MGLCASKPEARDDDSEHHVEFSAGNVHLITTKEAWDQKLEEANTGGKIVIANFSATWCGP 60
           MGLC SK E RDDDSEHHVEF+AGNVHLITTKE+WDQKLEEANT GKIVIANFSATWCGP
Sbjct: 1   MGLCFSKSETRDDDSEHHVEFAAGNVHLITTKESWDQKLEEANTSGKIVIANFSATWCGP 60

Query: 61  CKMVAPFYSELSEKHPSLMFLVVDVDELTVHSRLAYNIYQHVLVFLQDFSTSWDIKATPT 120
           CK+VAPFYSELSEK+ SLMFLVVDVDELT                  DFSTSWDIKATPT
Sbjct: 61  CKVVAPFYSELSEKYESLMFLVVDVDELT------------------DFSTSWDIKATPT 120

Query: 121 FFFLKEGQQIDKLVGANKIELERKITAMADSLPPNR 157
           FFFLKEGQQIDKLVGANKIELE+KI A+ADSLPPNR
Sbjct: 121 FFFLKEGQQIDKLVGANKIELEKKIIAVADSLPPNR 138

[Close]

BLAST of ClCG04G006290 vs. ExPASy TrEMBL
Match: A0A1S3CKE7 (thioredoxin H-type OS=Cucumis melo OX=3656 GN=LOC103501473 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.7e-64
Identity = 126/156 (80.77%), Postives = 132/156 (84.62%), Query Frame = 0


Query: 1   MGLCASKPEARDDDSEHHVEFSAGNVHLITTKEAWDQKLEEANTGGKIVIANFSATWCGP 60
           MGLC SK E RDDDSEHHVEF+AGNVHLITTKE+WDQKLEEANT GKIVIANFSATWCGP
Sbjct: 1   MGLCFSKSETRDDDSEHHVEFAAGNVHLITTKESWDQKLEEANTSGKIVIANFSATWCGP 60

Query: 61  CKMVAPFYSELSEKHPSLMFLVVDVDELTVHSRLAYNIYQHVLVFLQDFSTSWDIKATPT 120
           CK+VAPFYSELSEK+ SLMFLVVDVDELT                  DFSTSWDIKATPT
Sbjct: 61  CKVVAPFYSELSEKYESLMFLVVDVDELT------------------DFSTSWDIKATPT 120

Query: 121 FFFLKEGQQIDKLVGANKIELERKITAMADSLPPNR 157
           FFFLKEGQQIDKLVGANKIELE+KI A+ADSLPPNR
Sbjct: 121 FFFLKEGQQIDKLVGANKIELEKKIIAVADSLPPNR 138

[Close]

BLAST of ClCG04G006290 vs. ExPASy TrEMBL
Match: A0A0A0L068 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G334700 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 6.0e-64
Identity = 125/156 (80.13%), Postives = 132/156 (84.62%), Query Frame = 0


Query: 1   MGLCASKPEARDDDSEHHVEFSAGNVHLITTKEAWDQKLEEANTGGKIVIANFSATWCGP 60
           MGLC SK E +DDDS+HHVEF+AG VHLITTKEAWDQKLEEANT GKIVIANFSATWCGP
Sbjct: 1   MGLCFSKAETKDDDSDHHVEFAAGKVHLITTKEAWDQKLEEANTSGKIVIANFSATWCGP 60

Query: 61  CKMVAPFYSELSEKHPSLMFLVVDVDELTVHSRLAYNIYQHVLVFLQDFSTSWDIKATPT 120
           CK+VAPFYSELSEK+ SLMFLVVDVDELT                  DFSTSWDIKATPT
Sbjct: 61  CKVVAPFYSELSEKYESLMFLVVDVDELT------------------DFSTSWDIKATPT 120

Query: 121 FFFLKEGQQIDKLVGANKIELERKITAMADSLPPNR 157
           FFFLKEGQQIDKLVGANKIELE+KITA+ADSLPPNR
Sbjct: 121 FFFLKEGQQIDKLVGANKIELEKKITAVADSLPPNR 138

[Close]

BLAST of ClCG04G006290 vs. ExPASy TrEMBL
Match: A0A6J1CSN3 (thioredoxin H9 OS=Momordica charantia OX=3673 GN=LOC111013850 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 6.2e-61
Identity = 118/152 (77.63%), Postives = 129/152 (84.87%), Query Frame = 0


Query: 1   MGLCASKPEARDDDSEHHVEFSAGNVHLITTKEAWDQKLEEANTGGKIVIANFSATWCGP 60
           MGLC+SKPE RDD+ E+HVEFSAGNVHL+TTKEAWD+KL EA+ GGKIV+ANFSATWCGP
Sbjct: 1   MGLCSSKPETRDDEPENHVEFSAGNVHLVTTKEAWDEKLAEASRGGKIVVANFSATWCGP 60

Query: 61  CKMVAPFYSELSEKHPSLMFLVVDVDELTVHSRLAYNIYQHVLVFLQDFSTSWDIKATPT 120
           CKM+APFYSELSEK+PSLMFLVVDVDELT                  DFSTSWDIKATPT
Sbjct: 61  CKMIAPFYSELSEKYPSLMFLVVDVDELT------------------DFSTSWDIKATPT 120

Query: 121 FFFLKEGQQIDKLVGANKIELERKITAMADSL 153
           FFFLKEGQQIDKLVGANK EL+RKITAMADS+
Sbjct: 121 FFFLKEGQQIDKLVGANKPELQRKITAMADSV 134

[Close]

BLAST of ClCG04G006290 vs. ExPASy TrEMBL
Match: A0A6J1GEY7 (thioredoxin H-type-like OS=Cucurbita moschata OX=3662 GN=LOC111453320 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.1e-60
Identity = 118/156 (75.64%), Postives = 130/156 (83.33%), Query Frame = 0


Query: 1   MGLCASKPEARDDDSEHHVEFSAGNVHLITTKEAWDQKLEEANTGGKIVIANFSATWCGP 60
           MGLCASK E +DD+SEHHVEF+ GNV LITTKEAW+QK+EEAN  GKIVIANFSA+WCGP
Sbjct: 1   MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGP 60

Query: 61  CKMVAPFYSELSEKHPSLMFLVVDVDELTVHSRLAYNIYQHVLVFLQDFSTSWDIKATPT 120
           CK+VAPFYSELSEK+PSLMFLVVDVDELT                  DFST+WDIKATPT
Sbjct: 61  CKVVAPFYSELSEKYPSLMFLVVDVDELT------------------DFSTTWDIKATPT 120

Query: 121 FFFLKEGQQIDKLVGANKIELERKITAMADSLPPNR 157
           FFFLKEGQQIDKLVGANK ELE K+TA+ADSLPPN+
Sbjct: 121 FFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ 138

[Close]

BLAST of ClCG04G006290 vs. TAIR 10
Match: AT3G08710.1 (thioredoxin H-type 9 )

HSP 1 Score: 206.1 bits (523), Expect = 2.1e-53
Identity = 102/153 (66.67%), Postives = 118/153 (77.12%), Query Frame = 0


Query: 1   MGLCASKPEARDDDSEHHVEFSAGNVHLITTKEAWDQKLEEANTGGKIVIANFSATWCGP 60
           MG C SK +  DDDS H+VEFS GNVHLITTKE+WD KL EA+  GKIV+ANFSATWCGP
Sbjct: 1   MGSCVSKGKG-DDDSVHNVEFSGGNVHLITTKESWDDKLAEADRDGKIVVANFSATWCGP 60

Query: 61  CKMVAPFYSELSEKHPSLMFLVVDVDELTVHSRLAYNIYQHVLVFLQDFSTSWDIKATPT 120
           CK+VAPF+ ELSEKH SLMFL+VDVDEL+                  DFS+SWDIKATPT
Sbjct: 61  CKIVAPFFIELSEKHSSLMFLLVDVDELS------------------DFSSSWDIKATPT 120

Query: 121 FFFLKEGQQIDKLVGANKIELERKITAMADSLP 154
           FFFLK GQQI KLVGANK EL++K+T++ DS+P
Sbjct: 121 FFFLKNGQQIGKLVGANKPELQKKVTSIIDSVP 134

[Close]

BLAST of ClCG04G006290 vs. TAIR 10
Match: AT3G08710.2 (thioredoxin H-type 9 )

HSP 1 Score: 206.1 bits (523), Expect = 2.1e-53
Identity = 102/153 (66.67%), Postives = 118/153 (77.12%), Query Frame = 0


Query: 1   MGLCASKPEARDDDSEHHVEFSAGNVHLITTKEAWDQKLEEANTGGKIVIANFSATWCGP 60
           MG C SK +  DDDS H+VEFS GNVHLITTKE+WD KL EA+  GKIV+ANFSATWCGP
Sbjct: 1   MGSCVSKGKG-DDDSVHNVEFSGGNVHLITTKESWDDKLAEADRDGKIVVANFSATWCGP 60

Query: 61  CKMVAPFYSELSEKHPSLMFLVVDVDELTVHSRLAYNIYQHVLVFLQDFSTSWDIKATPT 120
           CK+VAPF+ ELSEKH SLMFL+VDVDEL+                  DFS+SWDIKATPT
Sbjct: 61  CKIVAPFFIELSEKHSSLMFLLVDVDELS------------------DFSSSWDIKATPT 120

Query: 121 FFFLKEGQQIDKLVGANKIELERKITAMADSLP 154
           FFFLK GQQI KLVGANK EL++K+T++ DS+P
Sbjct: 121 FFFLKNGQQIGKLVGANKPELQKKVTSIIDSVP 134

[Close]

BLAST of ClCG04G006290 vs. TAIR 10
Match: AT3G56420.1 (Thioredoxin superfamily protein )

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-28
Identity = 56/129 (43.41%), Postives = 82/129 (63.57%), Query Frame = 0


Query: 22  SAGNVHLITTKEAWDQKLEEANTGGKIVIANFSATWCGPCKMVAPFYSELSEKHPSLMFL 81
           S G VH ++  E W++K+ EAN  GKI++ NFSA WC PCK + P + +L+ ++PS++F+
Sbjct: 38  SKGKVHPVSRIEKWEEKITEANNHGKILVVNFSAPWCVPCKKIEPVFRDLASRYPSMIFV 97

Query: 82  VVDVDELTVHSRLAYNIYQHVLVFLQDFSTSWDIKATPTFFFLKEGQQIDKLVGANKIEL 141
            VDV+EL                   +FS  W+++ATPT  FLK+G+Q+DKLVGA   EL
Sbjct: 98  TVDVEELA------------------EFSNEWNVEATPTVVFLKDGRQMDKLVGAETSEL 148

Query: 142 ERKITAMAD 151
           ++K  A AD
Sbjct: 158 QKKTAAAAD 148

[Close]

BLAST of ClCG04G006290 vs. TAIR 10
Match: AT2G40790.1 (C-terminal cysteine residue is changed to a serine 2 )

HSP 1 Score: 116.3 bits (290), Expect = 2.2e-26
Identity = 55/149 (36.91%), Postives = 85/149 (57.05%), Query Frame = 0


Query: 4   CASKPEARDDDSEHHVEFSAGNVHLITTKEAWDQKLEEANTGGKIVIANFSATWCGPCKM 63
           C ++       S+    F  G VH ++  E W++K+ EAN+ GKI++ NF A+WC P K 
Sbjct: 20  CCNRRNKTQARSQKGSYFIKGKVHPVSRMEKWEEKITEANSHGKILVVNFKASWCLPSKT 79

Query: 64  VAPFYSELSEKHPSLMFLVVDVDELTVHSRLAYNIYQHVLVFLQDFSTSWDIKATPTFFF 123
           + P Y EL+  + S++F+ +DV+EL                   +FS  W++ ATPT  F
Sbjct: 80  ILPIYQELASTYTSMIFVTIDVEELA------------------EFSHEWNVDATPTVVF 139

Query: 124 LKEGQQIDKLVGANKIELERKITAMADSL 153
           LK+G+Q+DKLVG +  EL++K  A A+ L
Sbjct: 140 LKDGRQMDKLVGGDAAELQKKTAAAANLL 150

[Close]

BLAST of ClCG04G006290 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 107.1 bits (266), Expect = 1.3e-23
Identity = 49/122 (40.16%), Postives = 77/122 (63.11%), Query Frame = 0


Query: 24  GNVHLITTKEAWDQKLEEANTGGKIVIANFSATWCGPCKMVAPFYSELSEKHPSLMFLVV 83
           G V    T E W+++L++AN    +V+ +F+A+WCGPC+ +APF+++L++K P+++FL V
Sbjct: 6   GQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKV 65

Query: 84  DVDELTVHSRLAYNIYQHVLVFLQDFSTSWDIKATPTFFFLKEGQQIDKLVGANKIELER 143
           D DE                  L+  ++ W I+A PTF FLKEG+ +DK+VGA K EL+ 
Sbjct: 66  DTDE------------------LKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQS 109

Query: 144 KI 146
            I
Sbjct: 126 TI 109

The following BLAST results are available for this feature:

BLAST of ClCG04G006290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883656.1	2.0e-66	82.80	thioredoxin H9 [Benincasa hispida] >XP_038883657.1 thioredoxin H9 [Benincasa his...	[more]
XP_008463273.1	5.6e-64	80.77	PREDICTED: thioredoxin H-type [Cucumis melo] >KAA0025417.1 thioredoxin H-type [C...	[more]
XP_004142678.1	1.2e-63	80.13	thioredoxin H-type isoform X1 [Cucumis sativus] >KGN54459.1 hypothetical protein...	[more]
XP_022144072.1	1.3e-60	77.63	thioredoxin H9 [Momordica charantia]	[more]
KAG7033711.1	2.2e-60	75.64	hypothetical protein SDJN02_03436, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of ClCG04G006290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9Y6	3.0e-52	66.67	Thioredoxin H9 OS=Arabidopsis thaliana OX=3702 GN=TRX9 PE=1 SV=1	[more]
P85801	3.9e-52	63.23	Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1	[more]
Q9AS75	8.7e-44	54.97	Thioredoxin H4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0168200 PE=2 S...	[more]
Q0DKF1	3.6e-42	54.00	Thioredoxin H4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0169000 PE=2 S...	[more]
Q9LXZ8	1.5e-27	43.41	Putative thioredoxin H10 OS=Arabidopsis thaliana OX=3702 GN=At3g56420 PE=3 SV=2	[more]

BLAST of ClCG04G006290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SL29	2.7e-64	80.77	Thioredoxin H-type OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G0...	[more]
A0A1S3CKE7	2.7e-64	80.77	thioredoxin H-type OS=Cucumis melo OX=3656 GN=LOC103501473 PE=4 SV=1	[more]
A0A0A0L068	6.0e-64	80.13	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G334700...	[more]
A0A6J1CSN3	6.2e-61	77.63	thioredoxin H9 OS=Momordica charantia OX=3673 GN=LOC111013850 PE=4 SV=1	[more]
A0A6J1GEY7	1.1e-60	75.64	thioredoxin H-type-like OS=Cucurbita moschata OX=3662 GN=LOC111453320 PE=4 SV=1	[more]

BLAST of ClCG04G006290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08710.1	2.1e-53	66.67	thioredoxin H-type 9	[more]
AT3G08710.2	2.1e-53	66.67	thioredoxin H-type 9	[more]
AT3G56420.1	1.1e-28	43.41	Thioredoxin superfamily protein	[more]
AT2G40790.1	2.2e-26	36.91	C-terminal cysteine residue is changed to a serine 2	[more]
AT3G51030.1	1.3e-23	40.16	thioredoxin H-type 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 57..66 score: 67.39 coord: 49..57 score: 43.58 coord: 114..125 score: 31.39
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..155 e-value: 1.6E-42 score: 146.3
None	No IPR available	PANTHER	PTHR10438:SF438	THIOREDOXIN	coord: 1..155
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 1..155
None	No IPR available	CDD	cd02947	TRX_family	coord: 39..145 e-value: 2.04073E-28 score: 98.7844
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 29..89 e-value: 2.1E-13 score: 50.2
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..150 score: 10.966333
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 50..68
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 20..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG04G006290.2	ClCG04G006290.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007154	cell communication
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009536	plastid
molecular_function	GO:0016491	oxidoreductase activity