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ClCG04G004330 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTAGCATTATCTTCTTTCTCTTCTTCTTCAAATTTGTTTCTAAGCAATAGAAAAAGGTGGCCATTTGAAGAGCTTTCTGAACAGAACTGCATTGACAAAGTGGCAGCTGAAAAAAATTGTGAGTCACCATTGTTTGATCTTCATTTCACTCCAATGGAAGTTGATGATAAGTCAATGCCTTCAATCATTGTTGCTGTTGATGATCTATTGGAGTCAAGGAGGCTCAACCATAATGCAAGCGAGCGCGATCGTAGAAAGAAGATCAATCTTCTCTTTTCTTCTCTTCGCTCCGTTCTTCCTTCTCATGACCAAGGGGTATACTTATTATGAAAAAGAAGGCTCCCTCGAAACTTATATAATTAGCATCTACTAGATGATATAATATTCCATTTAACTTCACTCATTAGCTTAAGCTTTTGGATTAATCAGTGATTTAACATATAGTATCATAGCATGTGGCTAAGAAGTATTATATTAAAGAAAGATAAGATAAAAGATAAAGTATTATATTTACGTTCACTTGTCAACTAAAGCATTTGGGTAAATTGGTGATTTAACATAGTCCTATCAGAGCAGGTGGTTAAGGAAGTCTTGTATTCAAATCGTGTAATGTTATATTTCCTCCACATTAATATTAATTTATATTTGTTGGGTAGAAACATTAAATTTACCAACAAATATTTAAATTGAAAATATATCGAATTTTTACCATTGAAATCACTACTAAACTCAAAATTTAATTTTGATTTATGCAGAAGAGACTAAGCAATCCAGCAACAGTTTCGGTTGCACTAAAATACATACCAAATCTACAAAAGCAAGTGGAGGAACTTGTTGAGAAGAAGAGACAGCTTATGTTTTCGATGACTACGAGGAGACAAGAAGAAAGCAGCTCATGCTTGCTGACTGTTTCAACCAATAGCCTTAGTGAAAGAGAAGTTGTTGTCCAAATAATTTCCACCTATCATGGAATCCCTTTGTCTTGCATCTTGCTTGGTTTACATGAAGATGGGCTTCACCCTCTCAATATTTCTTCATCTTTGTCCTTTGGAGGAAGAATCATTTGCCATTTACATCTTCAGGTAACTATATATTATTCCAATTATTCTTCACTAGTTTACATAGAATTTCTATTTTAGTGCTAATATGATAATAACTAACGGTTATGTTATATTCCTTCAACTAAGAAATTAGACATTTTAATGATCTTCTAATTTACTTTCGATCAAGTTGTTAGAGATTTTAAACTTCTAGTTACACCACATATATGTTGTTGAATTTAAAAAAATATATATACATTTTAGGTGTTTAAATATACTTTTGGTCTTTGTACTTTAAATTTATTTTGGTTCTTTTTTATTCTTGTACTCTTAAAATTAATGTTCATTTTGGTTCTTGTAATTTGAACTTTCGTTCATTTTTTATCCTTTTATTTTTAAAAAGTGACTATTTTGGTCCTAAAATAAATAAAAATGAAAATAAAGGGATTAAAATGGTCCACTTTTAAAAATACAAAGACTACAATGGACATTTTGAAATCACATGAAAAAGCAAAACGAACCAAAAGCCGCATAGAGATCAAAATATTATTCAAACATATATTTTATATCTTATGCATTTTAACTTTCATTTACACTTCTTTGTTTGCCCGCTAAGCTATGCTCACTTTAACCATTTTTATTCAACATAAATGTAGTAATTAAAGATAAATATTAACATAAAGGTTAAAACACTTTCAGTCCACAAACTTTCATAGAAGTAACAACTTAGTCCATGTACTTCAGTTTGTAACAAGTTAGTCCTTGTATTTTCAATTTTGTAACAATTTAGTCTCTAAACTTTACTATGTAACAATTTAGCCTTTGTTTTTAAATTTTGTAATGATTTAGTCCCTGTTGTAGAGATTAGTGTTAAGGTTTAATGAGATTTCTTGCATAAATAAACCGATAAACTAATTAAGGACTCCATATTTTTACAAAATACAAAGTCTACATTATAAAATAATAAAATTTGACATCTAATTTTGATGATTTTTTTTTTTTAATTTTTACATTAGGGACTAAATTGTTACAAGTTTGAAAAGTACAAGGACTAAATTGTTACTTTCATGAAAGTTTAGGGACCAAAACTGATTTTTAACTAATTTATGTTATATAACTGAATTTATATATATATATATATATATTTTTAAAGATGTCACATTAAAGACTAATACAAGCTATTAAGATTTGAATATAAATCATTCATATTATTTTTTAGGTAAAGTTATCCAAAAACGATTCTCCATTTGATTTACGTGGAAATGACATATCGATAAGATTTGAATATAAATTGAATTAACTTTTTTTTCGAAAGTATATATAGGGAAAAGTCTTTATACAAGACATCCTAAGCTTGTATTTTAAGCCATGTGTAAGGCTTCCATCGTCATACAAACGAAAATGGTTGGTCTAAGAGTTTATATTAAGTAATGTTAATGAAAGTTTAGTGATAAAGATCAAAACAAACTAATCTCTAAGATGAGTTCAAACACGTCTCTAGTAGAAATTTTTTTTTCATATTAACTACTGAACTTATTAGAATTACACCACTCTTATAATTGGAACGTATGATTTTTATTTTTTTTCTTTATTTATTTTTTCTTTTTTAAGTTTCAACGATGCATGGGGTAGGGATGTTTGATTTTGCAAGAATGAAAATGAGATTACTTGATAGAAAAAACTACTTCATTATTTATCATTGTTATCTTCTTACTCTTGATTAAACAGCTTTCTTTTTTCAAATTCTCTACTTAAATAGTTAATTTACAATGAAACAAAATTCGTTTAAAAAGGGAATATTCTTAGCTTTTCAAATAAAAAAAATAATATCTCATAAAAAGTTTAAATTTAGACTTTATTTATAGATAAAAGAAAGAAACTGAAATAAAAAATAGGCAGGATGAGATTGTCCATCTCCGTTTAGTTATTAATTAGGTAAAAATTTGTCCCCACCTCCTTTTCCTTTTAGTTCTTTAGAGAAAAATATTATTCCTAATATGGAGTGAGGTAATTCAAACGTTTAACCTTCTAGTTGATAGTATGTTAAGTGAGTCATTGCATGTTTCTTACGTTGGACAATTACATATGATTAAAAGGTGTGAAAACAACCAACATAAGATCAACTCAATTGACATAAACTTGTATTATCAACTACGAGGATGAAAGTTCAATCTCTGACCTCGTAAGTTGTTAGAAAATAATATATATAATTTTGCCACCTTATTGATAACTATAGGTTTCTAAAAATTTGATAATGTTATGAAATCAACAAATAAAGAATAGAGAAAACATAAAATAGTAGAGAATCAACATACAAACTTACGTGGTTCACTAACAGTGTGTTAACTATGTCCACGGAGTAGACGAGAACAATTTTATTAGAAAGAATGGTAGGAAATACAAAATAGTGTTTACATAGTGTATTTCTCTAAACCCTAAGGTCATAACTGTAAATAACCATAAATAATTAAATATATCAAATACTAAATTCTTTCCAATCACCAAGACTCTTGTACTTTGTCGTTCAAAGTACCAGATAACAAATTCAAAATATTCAACAGTTAGTTATCTTATATTAATTTTCAAATTAGGTTAAATAGCTTTAGTTTTCTTGAAAGCTCCTTACTTCAAATATTCGAGGTCTATAGCACATTTAAGCCTTTTATGAATCTAAACCTCCTAGATAATATAGATAATATTTAAATAATGAATCTAATTTTCTTGTTCCCTTTCTGACTTTTGTAGGTTGAAAAAGAAAGAAAACAGATAGAATCCAAGATTCTGAATGACAAAGTGTTGCGAATATATGATAATATTAATTATCTGCAAACATTTTTTGATAACAAGAAATATTAG ATGTTAGCATTATCTTCTTTCTCTTCTTCTTCAAATTTGTTTCTAAGCAATAGAAAAAGGTGGCCATTTGAAGAGCTTTCTGAACAGAACTGCATTGACAAAGTGGCAGCTGAAAAAAATTGTGAGTCACCATTGTTTGATCTTCATTTCACTCCAATGGAAGTTGATGATAAGTCAATGCCTTCAATCATTGTTGCTGTTGATGATCTATTGGAGTCAAGGAGGCTCAACCATAATGCAAGCGAGCGCGATCGTAGAAAGAAGATCAATCTTCTCTTTTCTTCTCTTCGCTCCGTTCTTCCTTCTCATGACCAAGGGAAGAGACTAAGCAATCCAGCAACAGTTTCGGTTGCACTAAAATACATACCAAATCTACAAAAGCAAGTGGAGGAACTTGTTGAGAAGAAGAGACAGCTTATGTTTTCGATGACTACGAGGAGACAAGAAGAAAGCAGCTCATGCTTGCTGACTGTTTCAACCAATAGCCTTAGTGAAAGAGAAGTTGTTGTCCAAATAATTTCCACCTATCATGGAATCCCTTTGTCTTGCATCTTGCTTGGTTTACATGAAGATGGGCTTCACCCTCTCAATATTTCTTCATCTTTGTCCTTTGGAGGAAGAATCATTTGCCATTTACATCTTCAGGTTGAAAAAGAAAGAAAACAGATAGAATCCAAGATTCTGAATGACAAAGTGTTGCGAATATATGATAATATTAATTATCTGCAAACATTTTTTGATAACAAGAAATATTAG ATGTTAGCATTATCTTCTTTCTCTTCTTCTTCAAATTTGTTTCTAAGCAATAGAAAAAGGTGGCCATTTGAAGAGCTTTCTGAACAGAACTGCATTGACAAAGTGGCAGCTGAAAAAAATTGTGAGTCACCATTGTTTGATCTTCATTTCACTCCAATGGAAGTTGATGATAAGTCAATGCCTTCAATCATTGTTGCTGTTGATGATCTATTGGAGTCAAGGAGGCTCAACCATAATGCAAGCGAGCGCGATCGTAGAAAGAAGATCAATCTTCTCTTTTCTTCTCTTCGCTCCGTTCTTCCTTCTCATGACCAAGGGAAGAGACTAAGCAATCCAGCAACAGTTTCGGTTGCACTAAAATACATACCAAATCTACAAAAGCAAGTGGAGGAACTTGTTGAGAAGAAGAGACAGCTTATGTTTTCGATGACTACGAGGAGACAAGAAGAAAGCAGCTCATGCTTGCTGACTGTTTCAACCAATAGCCTTAGTGAAAGAGAAGTTGTTGTCCAAATAATTTCCACCTATCATGGAATCCCTTTGTCTTGCATCTTGCTTGGTTTACATGAAGATGGGCTTCACCCTCTCAATATTTCTTCATCTTTGTCCTTTGGAGGAAGAATCATTTGCCATTTACATCTTCAGGTTGAAAAAGAAAGAAAACAGATAGAATCCAAGATTCTGAATGACAAAGTGTTGCGAATATATGATAATATTAATTATCTGCAAACATTTTTTGATAACAAGAAATATTAG MLALSSFSSSSNLFLSNRKRWPFEELSEQNCIDKVAAEKNCESPLFDLHFTPMEVDDKSMPSIIVAVDDLLESRRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALKYIPNLQKQVEELVEKKRQLMFSMTTRRQEESSSCLLTVSTNSLSEREVVVQIISTYHGIPLSCILLGLHEDGLHPLNISSSLSFGGRIICHLHLQVEKERKQIESKILNDKVLRIYDNINYLQTFFDNKKY Homology
BLAST of ClCG04G004330 vs. NCBI nr
Match: XP_038882376.1 (transcription factor ORG2-like [Benincasa hispida]) HSP 1 Score: 243.8 bits (621), Expect = 1.6e-60 Identity = 136/164 (82.93%), Postives = 143/164 (87.20%), Query Frame = 0
BLAST of ClCG04G004330 vs. NCBI nr
Match: CAN64266.1 (hypothetical protein VITISV_031510 [Vitis vinifera]) HSP 1 Score: 155.6 bits (392), Expect = 5.6e-34 Identity = 107/230 (46.52%), Postives = 147/230 (63.91%), Query Frame = 0
BLAST of ClCG04G004330 vs. NCBI nr
Match: XP_010653965.1 (PREDICTED: transcription factor ORG2 [Vitis vinifera] >XP_019077027.1 PREDICTED: transcription factor ORG2 [Vitis vinifera] >RVW92213.1 Transcription factor ORG2 [Vitis vinifera] >CBI30114.3 unnamed protein product, partial [Vitis vinifera]) HSP 1 Score: 155.6 bits (392), Expect = 5.6e-34 Identity = 107/230 (46.52%), Postives = 147/230 (63.91%), Query Frame = 0
BLAST of ClCG04G004330 vs. NCBI nr
Match: XP_004513200.2 (transcription factor ORG2-like [Cicer arietinum]) HSP 1 Score: 152.9 bits (385), Expect = 3.6e-33 Identity = 100/228 (43.86%), Postives = 141/228 (61.84%), Query Frame = 0
BLAST of ClCG04G004330 vs. NCBI nr
Match: XP_024631418.2 (transcription factor ORG2 isoform X1 [Medicago truncatula]) HSP 1 Score: 152.1 bits (383), Expect = 6.2e-33 Identity = 102/235 (43.40%), Postives = 141/235 (60.00%), Query Frame = 0
BLAST of ClCG04G004330 vs. ExPASy Swiss-Prot
Match: Q9M1K1 (Transcription factor ORG2 OS=Arabidopsis thaliana OX=3702 GN=ORG2 PE=1 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 5.1e-30 Identity = 81/175 (46.29%), Postives = 117/175 (66.86%), Query Frame = 0
BLAST of ClCG04G004330 vs. ExPASy Swiss-Prot
Match: Q9M1K0 (Transcription factor ORG3 OS=Arabidopsis thaliana OX=3702 GN=ORG3 PE=1 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.9e-29 Identity = 81/175 (46.29%), Postives = 117/175 (66.86%), Query Frame = 0
BLAST of ClCG04G004330 vs. ExPASy Swiss-Prot
Match: Q9ZVB5 (Transcription factor bHLH100 OS=Arabidopsis thaliana OX=3702 GN=BHLH100 PE=1 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 7.4e-29 Identity = 88/210 (41.90%), Postives = 128/210 (60.95%), Query Frame = 0
BLAST of ClCG04G004330 vs. ExPASy Swiss-Prot
Match: A2WZ60 (Protein IRON-RELATED TRANSCRIPTION FACTOR 2 OS=Oryza sativa subsp. indica OX=39946 GN=IRO2 PE=3 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 3.0e-22 Identity = 80/191 (41.88%), Postives = 107/191 (56.02%), Query Frame = 0
BLAST of ClCG04G004330 vs. ExPASy Swiss-Prot
Match: Q9FYE6 (Transcription factor bHLH101 OS=Arabidopsis thaliana OX=3702 GN=BHLH101 PE=1 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.9e-21 Identity = 64/171 (37.43%), Postives = 107/171 (62.57%), Query Frame = 0
BLAST of ClCG04G004330 vs. ExPASy TrEMBL
Match: D7TIN8 (BHLH domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g05300 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 2.7e-34 Identity = 107/230 (46.52%), Postives = 147/230 (63.91%), Query Frame = 0
BLAST of ClCG04G004330 vs. ExPASy TrEMBL
Match: A0A438I684 (Transcription factor ORG2 OS=Vitis vinifera OX=29760 GN=ORG2_2 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 2.7e-34 Identity = 107/230 (46.52%), Postives = 147/230 (63.91%), Query Frame = 0
BLAST of ClCG04G004330 vs. ExPASy TrEMBL
Match: A5C6G0 (BHLH domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_031510 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 2.7e-34 Identity = 107/230 (46.52%), Postives = 147/230 (63.91%), Query Frame = 0
BLAST of ClCG04G004330 vs. ExPASy TrEMBL
Match: A0A1S2Z1A2 (transcription factor ORG2-like OS=Cicer arietinum OX=3827 GN=LOC101491521 PE=4 SV=2) HSP 1 Score: 152.9 bits (385), Expect = 1.8e-33 Identity = 100/228 (43.86%), Postives = 141/228 (61.84%), Query Frame = 0
BLAST of ClCG04G004330 vs. ExPASy TrEMBL
Match: A0A396JRE0 (Putative transcription factor bHLH family OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr1g0170571 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 5.1e-33 Identity = 101/235 (42.98%), Postives = 139/235 (59.15%), Query Frame = 0
BLAST of ClCG04G004330 vs. TAIR 10
Match: AT3G56970.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 132.9 bits (333), Expect = 3.6e-31 Identity = 81/175 (46.29%), Postives = 117/175 (66.86%), Query Frame = 0
BLAST of ClCG04G004330 vs. TAIR 10
Match: AT3G56980.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 131.0 bits (328), Expect = 1.4e-30 Identity = 81/175 (46.29%), Postives = 117/175 (66.86%), Query Frame = 0
BLAST of ClCG04G004330 vs. TAIR 10
Match: AT2G41240.1 (basic helix-loop-helix protein 100 ) HSP 1 Score: 129.0 bits (323), Expect = 5.2e-30 Identity = 88/210 (41.90%), Postives = 128/210 (60.95%), Query Frame = 0
BLAST of ClCG04G004330 vs. TAIR 10
Match: AT2G41240.2 (basic helix-loop-helix protein 100 ) HSP 1 Score: 123.6 bits (309), Expect = 2.2e-28 Identity = 88/210 (41.90%), Postives = 127/210 (60.48%), Query Frame = 0
BLAST of ClCG04G004330 vs. TAIR 10
Match: AT5G04150.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 104.4 bits (259), Expect = 1.4e-22 Identity = 64/171 (37.43%), Postives = 107/171 (62.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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