ClCG04G000040 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACATCGGTACAAATAACTGGGCATTATGCAAAAACAATAAAGAAAATGTATATTAATATTTGAGTAATAGAGTTTTGGCATGATATAAATATTCATCTATACTATATTAAAAGGGGGAATAAGAGAGAATTTTTGTCTTCCCTTTTTGTCCCTACATTTTTAGTAAATGACTACTTTGCTAGACTCTTTATTTAGTGTCTGCTACGCGCGATGCTAGGAGAATAGAGTTATAACCTTATGTCGACGGGGCACAACTCATTGAATGCACATGATTATGTATAAAAATGTGACTATTCAAGCTTAGGTGTCCATTGATACCTTTTAATCTTTGGAACACCACTCTTCGAATTTAGGTGTCTATTGATTGTTTGTGTGTAGGTGGTTATACATCTAACGAATATATTCATACATGTATGGATGTGATCAATATAAAAGGCGACTTATCAGGTTTAGGTGTTAGTTGAGAGACATTAGGTCCTTCATATTTTTACTTTACAATTTATTAACATAATTTATAATTAATAAATATAAATAAATTTTCGCATTTACATTAATCTTTAGAAAATAAAAAATAAAATAATAAAATATTAAATTCATAAACATGTGCATTGTACGTAAGTCATTACTAGTTATTCGTAGCCTAAATGAATTATTATAAGACCACACTCCATGAAACATGAAACAGACACATGTATGAAAGATTGATTAAATATTGGTTTAGGAACATGTAAATAAAACCGGTTAAATTTGTGGTGTATTTTATATTATTAAATATTATTGAGTATATTCTTACAAAGAAACATATTTATTTGGGTGCATATACATATACACAAGAATGGAATATTGAAGATGTAAGGAAAATAACTAAGTATGGAATTAGGCTAAACAGAGGATCTAAATTCCTAATTTACAGCTTAATTACCAATAATGGTGAGTTGTTTAATGTTGGGAAATCACAAGGATATTATAATTAATTACTAAAATATGGAATGAATCGACATATAATATTATAATAATAATAATAATAATAATAACAATAATAATAATATTCCTCCTCCTCTGATTTTCACGGCCCTCAATAACACTTCTCATTTTCAATCTAATTTTAATTTCTCCCAAAAATAATGATTAAAAAAAAGAAAGAAAGAAAAGATACGAAAATATAATTATAATCACTTAAAATAGTGTCTTGTGTTTTGTTGATATATATTAGGTTGAGAATATTGTGTTTATAAGATTTGAGTTTAGGGGTGAGATTTATGATATGGGAGAAGAAAAAGAGGGAGAAAAAAGCTCATTGGGATCAGAAAAGAAGGAAAGGAGGAGGAAGAAGAGTTTGTTTGAATGGAGTAAAGGAGAAGAGGTAAATCTAGTGAAGAAGCTGATTGAGTTCCGTACAAAGAAGATGGGTGACGAAGAATTTTATCCGTTTTTGAGAAACGGGTCATTGGCTGAGGTGTCCAAGATTCAAATATTCAACAAGATTCAACAACTCAAAAACGAATATTTGGAGAAGAAGTTGGAGTTGAGAAAGATGAGAATCAAACATTTGAAATACGAGAATGATGATGAGATTTTTGAGTTATCAAATCGACTTTGGGGTGAAGTTGAAACAACTGGAAGCACTTCTACCTCTAAAGCGTTGGATGTGTGCAGTAGGAGTTATTTTGAAGGGTTTTTTGATGGCCATGGCCTTCATGTACAACTATTTACGCCATCTTTTCTCCATTCAACCAACAAGGATATCCACCATTTGTTTTCTCTTCAAAATCATCACTTCTTAATCAAAGCTAATTTGAAGGCTCAACTTGCCCAACTAAAGTACCACATCATTCAACATCCTTACAATAATCCTACCAATCTATAA ATGACATCGGTTGAGAATATTGTGTTTATAAGATTTGAGTTTAGGGGTGAGATTTATGATATGGGAGAAGAAAAAGAGGGAGAAAAAAGCTCATTGGGATCAGAAAAGAAGGAAAGGAGGAGGAAGAAGAGTTTGTTTGAATGGAGTAAAGGAGAAGAGGTAAATCTAGTGAAGAAGCTGATTGAGTTCCGTACAAAGAAGATGGGTGACGAAGAATTTTATCCGTTTTTGAGAAACGGGTCATTGGCTGAGGTGTCCAAGATTCAAATATTCAACAAGATTCAACAACTCAAAAACGAATATTTGGAGAAGAAGTTGGAGTTGAGAAAGATGAGAATCAAACATTTGAAATACGAGAATGATGATGAGATTTTTGAGTTATCAAATCGACTTTGGGGTGAAGTTGAAACAACTGGAAGCACTTCTACCTCTAAAGCGTTGGATGTGTGCAGTAGGAGTTATTTTGAAGGGTTTTTTGATGGCCATGGCCTTCATGTACAACTATTTACGCCATCTTTTCTCCATTCAACCAACAAGGATATCCACCATTTGTTTTCTCTTCAAAATCATCACTTCTTAATCAAAGCTAATTTGAAGGCTCAACTTGCCCAACTAAAGTACCACATCATTCAACATCCTTACAATAATCCTACCAATCTATAA ATGACATCGGTTGAGAATATTGTGTTTATAAGATTTGAGTTTAGGGGTGAGATTTATGATATGGGAGAAGAAAAAGAGGGAGAAAAAAGCTCATTGGGATCAGAAAAGAAGGAAAGGAGGAGGAAGAAGAGTTTGTTTGAATGGAGTAAAGGAGAAGAGGTAAATCTAGTGAAGAAGCTGATTGAGTTCCGTACAAAGAAGATGGGTGACGAAGAATTTTATCCGTTTTTGAGAAACGGGTCATTGGCTGAGGTGTCCAAGATTCAAATATTCAACAAGATTCAACAACTCAAAAACGAATATTTGGAGAAGAAGTTGGAGTTGAGAAAGATGAGAATCAAACATTTGAAATACGAGAATGATGATGAGATTTTTGAGTTATCAAATCGACTTTGGGGTGAAGTTGAAACAACTGGAAGCACTTCTACCTCTAAAGCGTTGGATGTGTGCAGTAGGAGTTATTTTGAAGGGTTTTTTGATGGCCATGGCCTTCATGTACAACTATTTACGCCATCTTTTCTCCATTCAACCAACAAGGATATCCACCATTTGTTTTCTCTTCAAAATCATCACTTCTTAATCAAAGCTAATTTGAAGGCTCAACTTGCCCAACTAAAGTACCACATCATTCAACATCCTTACAATAATCCTACCAATCTATAA MTSVENIVFIRFEFRGEIYDMGEEKEGEKSSLGSEKKERRRKKSLFEWSKGEEVNLVKKLIEFRTKKMGDEEFYPFLRNGSLAEVSKIQIFNKIQQLKNEYLEKKLELRKMRIKHLKYENDDEIFELSNRLWGEVETTGSTSTSKALDVCSRSYFEGFFDGHGLHVQLFTPSFLHSTNKDIHHLFSLQNHHFLIKANLKAQLAQLKYHIIQHPYNNPTNL Homology
BLAST of ClCG04G000040 vs. NCBI nr
Match: KAA0054121.1 (hypothetical protein E6C27_scaffold131G00330 [Cucumis melo var. makuwa]) HSP 1 Score: 259.2 bits (661), Expect = 3.2e-65 Identity = 143/211 (67.77%), Postives = 167/211 (79.15%), Query Frame = 0
BLAST of ClCG04G000040 vs. NCBI nr
Match: KAG6585881.1 (hypothetical protein SDJN03_18614, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 193.7 bits (491), Expect = 1.6e-45 Identity = 108/195 (55.38%), Postives = 137/195 (70.26%), Query Frame = 0
BLAST of ClCG04G000040 vs. NCBI nr
Match: KGN49711.1 (hypothetical protein Csa_018385 [Cucumis sativus]) HSP 1 Score: 171.4 bits (433), Expect = 8.7e-39 Identity = 104/206 (50.49%), Postives = 132/206 (64.08%), Query Frame = 0
BLAST of ClCG04G000040 vs. NCBI nr
Match: KAG6575378.1 (hypothetical protein SDJN03_26017, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 79.7 bits (195), Expect = 3.4e-11 Identity = 46/91 (50.55%), Postives = 59/91 (64.84%), Query Frame = 0
BLAST of ClCG04G000040 vs. NCBI nr
Match: XP_022158998.1 (probable transcription factor At4g01260 [Momordica charantia]) HSP 1 Score: 70.9 bits (172), Expect = 1.6e-08 Identity = 51/193 (26.42%), Postives = 99/193 (51.30%), Query Frame = 0
BLAST of ClCG04G000040 vs. ExPASy TrEMBL
Match: A0A5A7UKP8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G00330 PE=3 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 1.5e-65 Identity = 143/211 (67.77%), Postives = 167/211 (79.15%), Query Frame = 0
BLAST of ClCG04G000040 vs. ExPASy TrEMBL
Match: A0A0A0KPQ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G078280 PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.2e-39 Identity = 104/206 (50.49%), Postives = 132/206 (64.08%), Query Frame = 0
BLAST of ClCG04G000040 vs. ExPASy TrEMBL
Match: A0A200Q8S2 (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_497g13 PE=3 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 7.5e-04 Identity = 30/116 (25.86%), Postives = 72/116 (62.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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