ClCG03G017660 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG03G017660
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionProtein of unknown function (DUF3511)
LocationCG_Chr03: 32774371 .. 32774658 (-)
RNA-Seq ExpressionClCG03G017660
SyntenyClCG03G017660
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACGTTGCGACGCCACTCGGGAGCAGCCAGTTGCCGGAGCTCCACCGGGGTTGGGACCATGGAAACAATTAAAGAAATTAGATCTCGGAAGGAACGAGTGGTCGAGGCAACGAAATCGTCGAAGAAATCGATGGAAAAATGGTGGAATGATCCAGAGAATAAGAGGAAAAGGCGAGTGGCAAAATACAAATTCTATGCTGTGGATGCCAAAGTGAAGAATTCCATTAAGGAAGGCTTCAAATGGATGAAGAAAAAATGTTCTAAAATCATCTCTGGATTTTAA

mRNA sequence

ATGGAGACGTTGCGACGCCACTCGGGAGCAGCCAGTTGCCGGAGCTCCACCGGGGTTGGGACCATGGAAACAATTAAAGAAATTAGATCTCGGAAGGAACGAGTGGTCGAGGCAACGAAATCGTCGAAGAAATCGATGGAAAAATGGTGGAATGATCCAGAGAATAAGAGGAAAAGGCGAGTGGCAAAATACAAATTCTATGCTGTGGATGCCAAAGTGAAGAATTCCATTAAGGAAGGCTTCAAATGGATGAAGAAAAAATGTTCTAAAATCATCTCTGGATTTTAA

Coding sequence (CDS)

ATGGAGACGTTGCGACGCCACTCGGGAGCAGCCAGTTGCCGGAGCTCCACCGGGGTTGGGACCATGGAAACAATTAAAGAAATTAGATCTCGGAAGGAACGAGTGGTCGAGGCAACGAAATCGTCGAAGAAATCGATGGAAAAATGGTGGAATGATCCAGAGAATAAGAGGAAAAGGCGAGTGGCAAAATACAAATTCTATGCTGTGGATGCCAAAGTGAAGAATTCCATTAAGGAAGGCTTCAAATGGATGAAGAAAAAATGTTCTAAAATCATCTCTGGATTTTAA

Protein sequence

METLRRHSGAASCRSSTGVGTMETIKEIRSRKERVVEATKSSKKSMEKWWNDPENKRKRRVAKYKFYAVDAKVKNSIKEGFKWMKKKCSKIISGF
Homology
BLAST of ClCG03G017660 vs. NCBI nr
Match: KAG6588594.1 (hypothetical protein SDJN03_17159, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020542.1 hypothetical protein SDJN02_17228, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 110.2 bits (274), Expect = 1.0e-20
Identity = 63/97 (64.95%), Postives = 74/97 (76.29%), Query Frame = 0

Query: 1  METLRRHSGAASC--RSSTGVGTMETIKEIRSRKERVVEATKSSKKSMEKWWNDPENKRK 60
          ME  RR S AA+   RSS  VG+METIKE RS K+RVVEA    KKS+EKWW   E KRK
Sbjct: 1  MEAGRRRSAAAAAGGRSSGFVGSMETIKERRSGKQRVVEA----KKSVEKWWKGSETKRK 60

Query: 61 RRVAKYKFYAVDAKVKNSIKEGFKWMKKKCSKIISGF 96
          RRVAKYKFYAV+ K+K SI +GF+W+KK+C+KII GF
Sbjct: 61 RRVAKYKFYAVEGKLKRSITKGFQWIKKRCAKIIYGF 93

BLAST of ClCG03G017660 vs. NCBI nr
Match: KAG6588612.1 (hypothetical protein SDJN03_17177, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 109.4 bits (272), Expect = 1.7e-20
Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = 0

Query: 5  RRHSGAASCRSSTGVGTMETIKEIRSRKERVVEATKSSKKSMEKWWNDPENKRKRRVAKY 64
          RR + AA  RSS  VG+METIKE RS K+RVVEA    KKS+EKWW   E KRKRRVAKY
Sbjct: 6  RRSAAAAGGRSSGFVGSMETIKERRSGKQRVVEA----KKSVEKWWKGSETKRKRRVAKY 65

Query: 65 KFYAVDAKVKNSIKEGFKWMKKKCSKIISGF 96
          KFYAV+ K+K SI +GF+W+KK+C+KII GF
Sbjct: 66 KFYAVEGKLKRSITKGFQWIKKRCAKIIYGF 92

BLAST of ClCG03G017660 vs. NCBI nr
Match: KAA0050944.1 (hypothetical protein E6C27_scaffold761G00710 [Cucumis melo var. makuwa] >TYK10291.1 hypothetical protein E5676_scaffold16G004420 [Cucumis melo var. makuwa])

HSP 1 Score: 90.5 bits (223), Expect = 8.4e-15
Identity = 56/99 (56.57%), Postives = 71/99 (71.72%), Query Frame = 0

Query: 1  METLRRHSGAASCRSSTGVGTMETIKEIRSRKERVVEATKSSKKSMEKWWNDPE-NKRK- 60
          ME  +R SGA S +    +GT+ETIKE+RSR+ERVVE TK  K+S++KWWN+ E NKRK 
Sbjct: 1  MEAAQRWSGATSGQRPRRMGTLETIKEVRSRRERVVETTKMWKESVKKWWNNGEMNKRKG 60

Query: 61 RRVAKYKFYAVD-AKVKNSIKEGFKWMK-KKCSKIISGF 96
           RVAKYKFY ++ +K+K SI  GFKWMK  K    +S F
Sbjct: 61 GRVAKYKFYCLNSSKLKVSINNGFKWMKINKSDNSVSSF 99

BLAST of ClCG03G017660 vs. NCBI nr
Match: KAG7031408.1 (hypothetical protein SDJN02_05448, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 82.4 bits (202), Expect = 2.3e-12
Identity = 36/64 (56.25%), Postives = 52/64 (81.25%), Query Frame = 0

Query: 32  KERVVEATKSSKKSMEKWWNDPENKRKRRVAKYKFYAVDAKVKNSIKEGFKWMKKKCSKI 91
           K ++++ ++SSK+S   WW +P+ KR+RRVAKY+FY V+ KVK+SIK+G KW+K KCS+I
Sbjct: 49  KRQIIKTSESSKRSTRSWWKNPKIKRRRRVAKYRFYTVEGKVKSSIKKGIKWLKTKCSRI 108

Query: 92  ISGF 96
           I GF
Sbjct: 109 IFGF 112

BLAST of ClCG03G017660 vs. NCBI nr
Match: XP_022151002.1 (uncharacterized protein LOC111019023 [Momordica charantia])

HSP 1 Score: 82.0 bits (201), Expect = 3.0e-12
Identity = 36/66 (54.55%), Postives = 53/66 (80.30%), Query Frame = 0

Query: 30  SRKERVVEATKSSKKSMEKWWNDPENKRKRRVAKYKFYAVDAKVKNSIKEGFKWMKKKCS 89
           ++++ + + ++SSK S++ WW +PE KR+RRVAKYK Y V+ KVKNSIK+G KW K +CS
Sbjct: 45  TKRQAIKKPSESSKSSVKSWWKNPEMKRRRRVAKYKLYTVEGKVKNSIKKGIKWFKTRCS 104

Query: 90  KIISGF 96
           +I+SGF
Sbjct: 105 RIMSGF 110

BLAST of ClCG03G017660 vs. ExPASy TrEMBL
Match: A0A5D3CEU1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004420 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.1e-15
Identity = 56/99 (56.57%), Postives = 71/99 (71.72%), Query Frame = 0

Query: 1  METLRRHSGAASCRSSTGVGTMETIKEIRSRKERVVEATKSSKKSMEKWWNDPE-NKRK- 60
          ME  +R SGA S +    +GT+ETIKE+RSR+ERVVE TK  K+S++KWWN+ E NKRK 
Sbjct: 1  MEAAQRWSGATSGQRPRRMGTLETIKEVRSRRERVVETTKMWKESVKKWWNNGEMNKRKG 60

Query: 61 RRVAKYKFYAVD-AKVKNSIKEGFKWMK-KKCSKIISGF 96
           RVAKYKFY ++ +K+K SI  GFKWMK  K    +S F
Sbjct: 61 GRVAKYKFYCLNSSKLKVSINNGFKWMKINKSDNSVSSF 99

BLAST of ClCG03G017660 vs. ExPASy TrEMBL
Match: A0A7J7D0P0 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW12G01113 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.4e-12
Identity = 38/64 (59.38%), Postives = 50/64 (78.12%), Query Frame = 0

Query: 32  KERVVEATKSSKKSMEKWWNDPENKRKRRVAKYKFYAVDAKVKNSIKEGFKWMKKKCSKI 91
           KER ++  KSS    + WWNDPE KRK+RV KYK YAV+ KVK+SIK G++W+K+KCSK+
Sbjct: 52  KERNIKTHKSS--DTKSWWNDPEMKRKKRVVKYKLYAVEGKVKSSIKNGYRWLKRKCSKM 111

Query: 92  ISGF 96
           + GF
Sbjct: 112 VHGF 113

BLAST of ClCG03G017660 vs. ExPASy TrEMBL
Match: A0A6J1DCB3 (uncharacterized protein LOC111019023 OS=Momordica charantia OX=3673 GN=LOC111019023 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.4e-12
Identity = 36/66 (54.55%), Postives = 53/66 (80.30%), Query Frame = 0

Query: 30  SRKERVVEATKSSKKSMEKWWNDPENKRKRRVAKYKFYAVDAKVKNSIKEGFKWMKKKCS 89
           ++++ + + ++SSK S++ WW +PE KR+RRVAKYK Y V+ KVKNSIK+G KW K +CS
Sbjct: 45  TKRQAIKKPSESSKSSVKSWWKNPEMKRRRRVAKYKLYTVEGKVKNSIKKGIKWFKTRCS 104

Query: 90  KIISGF 96
           +I+SGF
Sbjct: 105 RIMSGF 110

BLAST of ClCG03G017660 vs. ExPASy TrEMBL
Match: A0A2P5D158 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_106230 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.6e-11
Identity = 35/62 (56.45%), Postives = 51/62 (82.26%), Query Frame = 0

Query: 32  KERVVEATKSSKKSMEKWWNDPENKRKRRVAKYKFYAVDAKVKNSIKEGFKWMKKKCSKI 91
           K+RV++A KS+ +S++ WWNDPE KR+RR++KYK Y+ +A VK S K+G +W++KKCS I
Sbjct: 48  KKRVLKAPKSATQSLKWWWNDPEMKRQRRISKYKLYSAEANVKRSFKKGLRWLRKKCSMI 107

Query: 92  IS 94
           IS
Sbjct: 108 IS 109

BLAST of ClCG03G017660 vs. ExPASy TrEMBL
Match: A0A2P5EVE2 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_146600 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.6e-11
Identity = 35/62 (56.45%), Postives = 51/62 (82.26%), Query Frame = 0

Query: 32  KERVVEATKSSKKSMEKWWNDPENKRKRRVAKYKFYAVDAKVKNSIKEGFKWMKKKCSKI 91
           K+RV++A KS+ +S++ WWNDPE KR+RR++KYK Y+ +A VK S K+G +W++KKCS I
Sbjct: 48  KKRVLKAPKSATQSLKWWWNDPEMKRQRRISKYKLYSAEANVKRSFKKGLRWLRKKCSMI 107

Query: 92  IS 94
           IS
Sbjct: 108 IS 109

BLAST of ClCG03G017660 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 66.2 bits (160), Expect = 1.6e-11
Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 0

Query: 30  SRKERVVEATKSSKKS--MEKWWNDPENKRKRRVAKYKFYAVDAKVKNSIKEGFKWMKKK 89
           S K+  V   +SS  S   + WWNDPE KRKRRVAKYK Y+ + K+K ++++ +KW+K +
Sbjct: 57  SYKDMPVRPRRSSSHSTLFKGWWNDPEIKRKRRVAKYKLYSAEGKMKITLRKSYKWIKIQ 116

Query: 90  CSKIISG 95
           CSKII G
Sbjct: 117 CSKIIHG 123

BLAST of ClCG03G017660 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 55.1 bits (131), Expect = 3.6e-08
Identity = 23/45 (51.11%), Postives = 35/45 (77.78%), Query Frame = 0

Query: 51  NDPENKRKRRVAKYKFYAVDAKVKNSIKEGFKWMKKKCSKIISGF 96
           +D E KRK+R+A+YK Y V+ KVK+++K GF+W+K KC +I+  F
Sbjct: 66  SDAEMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNKCCQIVHRF 110

BLAST of ClCG03G017660 vs. TAIR 10
Match: AT3G62640.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 51.2 bits (121), Expect = 5.3e-07
Identity = 23/43 (53.49%), Postives = 33/43 (76.74%), Query Frame = 0

Query: 52  DPENKRKRRVAKYKFYAVDAKVKNSIKEGFKWMKKKCSKIISG 95
           D E KRK+R+A YK YA++ KVK+++K+GF W+K + S II G
Sbjct: 68  DAETKRKKRIATYKTYALEGKVKSTVKKGFHWIKDRYSHIIHG 110

BLAST of ClCG03G017660 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 50.8 bits (120), Expect = 6.9e-07
Identity = 24/68 (35.29%), Postives = 42/68 (61.76%), Query Frame = 0

Query: 30  SRKERVVEATKSSKKSMEKWW--NDPENKRKRRVAKYKFYAVDAKVKNSIKEGFKWMKKK 89
           +R+  + +  K    +  K W   DPE +RK+RVA YK Y V+ KVK S +  F+W+K++
Sbjct: 37  TRENNIYDVKKEKSIARSKSWGITDPELQRKKRVASYKMYGVEGKVKGSFRNSFRWLKQR 96

Query: 90  CSKIISGF 96
            ++++ G+
Sbjct: 97  YTQVVYGW 104

BLAST of ClCG03G017660 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 48.1 bits (113), Expect = 4.4e-06
Identity = 22/56 (39.29%), Postives = 36/56 (64.29%), Query Frame = 0

Query: 40  KSSKKSMEKWWN--DPENKRKRRVAKYKFYAVDAKVKNSIKEGFKWMKKKCSKIIS 94
           K  + S    W   DP+ +RK+RV  Y+ Y V+ K+K S ++ FKW+K KC+K+++
Sbjct: 61  KKGRSSSSSSWGFVDPDLQRKKRVVSYRAYTVEGKLKGSFRKSFKWIKDKCNKLLN 116

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6588594.11.0e-2064.95hypothetical protein SDJN03_17159, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6588612.11.7e-2065.93hypothetical protein SDJN03_17177, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0050944.18.4e-1556.57hypothetical protein E6C27_scaffold761G00710 [Cucumis melo var. makuwa] >TYK1029... [more]
KAG7031408.12.3e-1256.25hypothetical protein SDJN02_05448, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022151002.13.0e-1254.55uncharacterized protein LOC111019023 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CEU14.1e-1556.57Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A7J7D0P01.4e-1259.38Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW12G01113 ... [more]
A0A6J1DCB31.4e-1254.55uncharacterized protein LOC111019023 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
A0A2P5D1581.6e-1156.45Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_106230 PE... [more]
A0A2P5EVE21.6e-1156.45Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_146600 PE=4 SV... [more]
Match NameE-valueIdentityDescription
AT3G05725.11.6e-1150.75Protein of unknown function (DUF3511) [more]
AT2G47480.13.6e-0851.11Protein of unknown function (DUF3511) [more]
AT3G62640.15.3e-0753.49Protein of unknown function (DUF3511) [more]
AT5G11970.16.9e-0735.29Protein of unknown function (DUF3511) [more]
AT2G19460.14.4e-0639.29Protein of unknown function (DUF3511) [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021899Protein of unknown function DUF3511PFAMPF12023DUF3511coord: 50..94
e-value: 3.0E-22
score: 78.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..23
NoneNo IPR availablePANTHERPTHR33193DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATEDcoord: 29..93
NoneNo IPR availablePANTHERPTHR33193:SF48SUBFAMILY NOT NAMEDcoord: 29..93

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG03G017660.1ClCG03G017660.1mRNA