ClCG03G014360 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCTAAACTCTCTCTTTGTCTTCTTCTTCTCCTCCTCCTCCTTCCCGAAATCAACAAACCCACACAAATTCCAAATTTAGGGATTGGGATTTGGAATCATCAAAATTTCCCATCCAATTATTATTTTCCAAGTAATTTCAGCTTGAATGTTGATTACGATACCATCCTCCGTCAGGTGGATTTCCGCGACTCTTTTCGTTTAGGTTGATGGGAAATGCCAATGGTAGGGAGGTGAGTTCTCCCGGCGGTGGTGGAGGACCACCAGCAGCCGGAGGAATAGCCGACGTCGATGGACAAAGTCCGGCAATTGACAGTTCGGTGACTAGTGAAACTAGTAACGTTGTTTCTTCAGATTCGATGGGAAATACTCCTCCTCATAGCCCTGGGAAGTTCCGATCCCCGATCTTGTTCGCTCCCCAGGTCAATATTTCGTTGTTTTCCCTCTAATATTTCTCTCTTGTAAATTGGGTTTGTGTCTCTTTCTGTTCTTTTGGATTTTTCTTAGTGTTGTTTTTGGTTGTTCGTGGGATGTGAATCATTCAATGATGTTGTTTTCATTACAATTCGTTTTGTTGTTGGGTTTTATTGTTTGGTGGAACTTGTGCTTCCCGGGAAATATCTTTACGAAGATATCTGTATTGCAATGTTTGTAAATGGGAAAGTTCCACCCAAGATCCACTTCATTGACTTCTCGAACTAAGATTGACTCAGTAATGTCAAGCGTTAGTTTTTTTTTCTTTTTTTACTTTGGATCATCCGCTTAATGCTGTGCTCTTTGGAGATTAATGGCTGAAATGTCTATTGTTGGATTTGCCTACTCTTATCAACTACAGTTTGTATATGATCACCTGGGATTTCTCTCTTAATCTTGATCGGCTTCAAGCTTTTGCCTAATTTATTAGAGTTGGTTGGTTGTTGGAATCAAGTATGTCATGGAGCTGAGTGTTTCTTCTATATCCGTTAAAGCATTGATAATGTGTCATCGATGTAGTAAGTGATGTGTTGTGATTAAACTTAATAGTTCCAGATTTGATCTTACTTGTCAAATATTTTGGCTCGATCGTGAGTTCGACTTTCTCACTTTTTGAGATGAACCAATTGTGAATTTGTATCATGTTTAGCCTTGGTTAGGGCTCTTGAAATGATGGTGGGTATATGTTACAAGGCTTGCAGGTTCCTGTGGCTCCCTTGCAAGTAGGTAATGGTCCAACCCATTACAATGAAGCCTGGCAGAACGAATTTGATGCAGCTATAGATAATCCTCCAGAGCAAGGAATCCCAACAATCATTACGTGGAGCTATGGTGGCAACAATGTCGCTGTTGAGGGGTCTTGGGACAACTGGGCTTCCAGGTTATTTCTTATGACTTCCAAGCTATTGTGATTCTTTCAAGCCTCAAGCTTCATGACATGAGTTCTACTGCATTTTGCATTAATAATGAAATATTATGTTACATTGCTTCTTCAGGAAGACCCTGCAGAGGACTGGCAAAGATTTTTCGCTGCTTATGGTCCTTCCATCTGGAGTGTATCATTACAAGTTCATTGTCGATGGTCAACGGAGATATATTCCAGATCTTCCTTTCATAGCTGATGAGATGGGCAATGTCTTTAATCTTCTCAATGTTTCTGTAAGTGTGATTCTTCCCTCCATCTGCATTACCCGGCATGAACTCGATCTTGACTCAATTATTTGTATTGAAAAATGATGCGTTTATTTGTAAAAATGGAAATTATCACGAAAAATACTTGCTTGATTCCATGTAGGCCTATCACTAGGGGGATAAATATCTGAAGAGAGTCCACGTTCACAGCTTCTCGTTTTTATAACTACAACCTTAATAATCCGTGAGAAATTGTTCACAAAAGAACCGATGAATGATTGTTCTATCAAAAAAAAGAAGAAAAAAAACTGATGAATGATTGTTTAAGCTCATTCATTTTCACATTATTGGTATCACTCATATGTTTGATGTAGAAATATTATAGTTTTAAACCTGGAAAAGGACCAAAGAAAAGAATGAGGAAAGCTCTCCACTCCTCAAGTCTTTAAAGTTATGCAGAAACTCAGATAGCCAAAATCGGCTTAATGTCTCAGGTTTTGACCATATAAGTTCTAAAAGAAAAGAGGAGAAAAAGTGTGGCAGTGTTCTCACTAAATGAGAAAAGAAGAGAGAGCAAAGGAGAGAAGCAACGGCATGTGCTTACAAATTAGTTGGCTGGTCTGAATGAGGCCAAAATCTCCTTGAACAAAGCCCTTTTTCCTTTTTGAACACTTGTGAACACCAACGTGATTAACACAAGTTCTTTGTTTATTTAATATCAGAAACGTGATTAACACAAGTACTCGAGGGTTTTGTCCTAATCCTCTATCTTTATCATGTCTAGATACGTGAATGTGTTAGCACCAAAGAATACTATTGCACCTGTTTGACTTTTTTTGGGGCTCTTAATTTTATCATTTTTGGAGGAGAAGAACGAGTTATATCGACATGTTGATTTGAAAATTATAGGGAATAATGAAAAGGTGCCTTCACAATAGATTATCCTGGCTCTCGTCCTTTCTTTTGAATTTGTGCAATGAGATACATTCATACTGTTTTCAAAGAAGACAAATGTCATACATTTCATCTTCTTGCTTGTCATGAGTGTGTTGGGATACTACCTTCACGCTCTATTTATTAATAGAGATAAGAAGGTTAAGTACCTATCCCCACCAATTCGAGAAGACAGGGATTCTCCTACTAAGTGTGAACACACTCACAACTTAACAAAATAACCGATAACCCGAAAATACAACATAAATTGCTATTTAAACACAGACCCCAACTAATCGGTGGGTGAATTTCCTTCTTTGGCCCTTCGAACATAAGTATTGACTATTGGGAGGTCTCACAAAGTTTCTACATTTTGCCAATTGATTGTTCTATCGAGCACACGTGTGCACAATAGAATATAAGGATGTAGTCTTCTTATGTTTCTGGTGTGTATTTATAGTCTGAGTTCATACTACTGTCCGTCGCCACAACTTTATAACTTTCTGGAACAGAAAGAAACCATATACTTTTCACATGATATTTTGTTGTATTCATTTTGTTATAATCCTGGATGTACATTGAGAAGTGTCCTGTCAACATTGTTTGGAGAAAGATGTATTACTTCACTTAGTTAATGCAATGCTAAAGCGAAACTGATTTTATGCATTTCACCTTCTCTCTTCATTTTGGAATTTTTTCCATTCTGTAGGATAGTGTGCCTGATATTCTACAGAGTGTGGCCGAGTTCGAGCCTCCACAATCACCAGAGACGACTTACAGCCAGACATTCCCCAGCGAGGAAGACTTCGCCAAGGAGCCAGCAGCAGTACCATCGCAACTGCACCTCACGGTTCTAGGTATGGAGAATGCTGACGAAGCTTCGTCCTCGAAGCCTCAACATGTTGTGCTTAACCACCTGTTCATAGAGAAAGGATGGGCTTCTCAGTCTGTGGTTGCTTTGGGACTTACTCATAGATTCCATTCAAAGTATGTCACCGTTGTTCTCTACAAACCGCTCAACAGGTAGTTGTCGTCAATTTTTCACGCTGAACTTTGTAAAGGATCACGAGCTACTGCACCCTCCATCGTCTGCGGAGGAATCTTGTTTTATAGAACTGCCTTGGCTAAAGTTTGCTAGCAACAAAAAGTAACTCTTATTCTGATGAATATTTCTTCAATCTGTGAAGAAATCTTTGTTTTATAGAACTGCTTGGCCAAAAAAAAGTTTTATTTCCTTGTCTCTAATTGTATCGATAGTAGTAGATTTGGATAGACTAAGGGGGGAGTCTTGGACTAGCATATATTTGTCTGGCTCAGTTTTAGCATTATCGTGTGCTACGTTTGACAAATTAATTTGGTGCCTAATTTTAG TTCTAAACTCTCTCTTTGTCTTCTTCTTCTCCTCCTCCTCCTTCCCGAAATCAACAAACCCACACAAATTCCAAATTTAGGGATTGGGATTTGGAATCATCAAAATTTCCCATCCAATTATTATTTTCCAAGTAATTTCAGCTTGAATGTTGATTACGATACCATCCTCCGTCAGGTGGATTTCCGCGACTCTTTTCGTTTAGGTTGATGGGAAATGCCAATGGTAGGGAGGTGAGTTCTCCCGGCGGTGGTGGAGGACCACCAGCAGCCGGAGGAATAGCCGACGTCGATGGACAAAGTCCGGCAATTGACAGTTCGGTGACTAGTGAAACTAGTAACGTTGTTTCTTCAGATTCGATGGGAAATACTCCTCCTCATAGCCCTGGGAAGTTCCGATCCCCGATCTTGTTCGCTCCCCAGGTTCCTGTGGCTCCCTTGCAAGTAGGTAATGGTCCAACCCATTACAATGAAGCCTGGCAGAACGAATTTGATGCAGCTATAGATAATCCTCCAGAGCAAGGAATCCCAACAATCATTACGTGGAGCTATGGTGGCAACAATGTCGCTGTTGAGGGGTCTTGGGACAACTGGGCTTCCAGGAAGACCCTGCAGAGGACTGGCAAAGATTTTTCGCTGCTTATGGTCCTTCCATCTGGAGTGTATCATTACAAGTTCATTGTCGATGGTCAACGGAGATATATTCCAGATCTTCCTTTCATAGCTGATGAGATGGGCAATGTCTTTAATCTTCTCAATGTTTCTGATAGTGTGCCTGATATTCTACAGAGTGTGGCCGAGTTCGAGCCTCCACAATCACCAGAGACGACTTACAGCCAGACATTCCCCAGCGAGGAAGACTTCGCCAAGGAGCCAGCAGCAGTACCATCGCAACTGCACCTCACGGTTCTAGGTATGGAGAATGCTGACGAAGCTTCGTCCTCGAAGCCTCAACATGTTGTGCTTAACCACCTGTTCATAGAGAAAGGATGGGCTTCTCAGTCTGTGGTTGCTTTGGGACTTACTCATAGATTCCATTCAAAGTATGTCACCGTTGTTCTCTACAAACCGCTCAACAGGTAGTTGTCGTCAATTTTTCACGCTGAACTTTGTAAAGGATCACGAGCTACTGCACCCTCCATCGTCTGCGGAGGAATCTTGTTTTATAGAACTGCCTTGGCTAAAGTTTGCTAGCAACAAAAAGTAACTCTTATTCTGATGAATATTTCTTCAATCTGTGAAGAAATCTTTGTTTTATAGAACTGCTTGGCCAAAAAAAAGTTTTATTTCCTTGTCTCTAATTGTATCGATAGTAGTAGATTTGGATAGACTAAGGGGGGAGTCTTGGACTAGCATATATTTGTCTGGCTCAGTTTTAGCATTATCGTGTGCTACGTTTGACAAATTAATTTGGTGCCTAATTTTAG ATGGGAAATGCCAATGGTAGGGAGGTGAGTTCTCCCGGCGGTGGTGGAGGACCACCAGCAGCCGGAGGAATAGCCGACGTCGATGGACAAAGTCCGGCAATTGACAGTTCGGTGACTAGTGAAACTAGTAACGTTGTTTCTTCAGATTCGATGGGAAATACTCCTCCTCATAGCCCTGGGAAGTTCCGATCCCCGATCTTGTTCGCTCCCCAGGTTCCTGTGGCTCCCTTGCAAGTAGGTAATGGTCCAACCCATTACAATGAAGCCTGGCAGAACGAATTTGATGCAGCTATAGATAATCCTCCAGAGCAAGGAATCCCAACAATCATTACGTGGAGCTATGGTGGCAACAATGTCGCTGTTGAGGGGTCTTGGGACAACTGGGCTTCCAGGAAGACCCTGCAGAGGACTGGCAAAGATTTTTCGCTGCTTATGGTCCTTCCATCTGGAGTGTATCATTACAAGTTCATTGTCGATGGTCAACGGAGATATATTCCAGATCTTCCTTTCATAGCTGATGAGATGGGCAATGTCTTTAATCTTCTCAATGTTTCTGATAGTGTGCCTGATATTCTACAGAGTGTGGCCGAGTTCGAGCCTCCACAATCACCAGAGACGACTTACAGCCAGACATTCCCCAGCGAGGAAGACTTCGCCAAGGAGCCAGCAGCAGTACCATCGCAACTGCACCTCACGGTTCTAGGTATGGAGAATGCTGACGAAGCTTCGTCCTCGAAGCCTCAACATGTTGTGCTTAACCACCTGTTCATAGAGAAAGGATGGGCTTCTCAGTCTGTGGTTGCTTTGGGACTTACTCATAGATTCCATTCAAAGTATGTCACCGTTGTTCTCTACAAACCGCTCAACAGGTAG MGNANGREVSSPGGGGGPPAAGGIADVDGQSPAIDSSVTSETSNVVSSDSMGNTPPHSPGKFRSPILFAPQVPVAPLQVGNGPTHYNEAWQNEFDAAIDNPPEQGIPTIITWSYGGNNVAVEGSWDNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNVSDSVPDILQSVAEFEPPQSPETTYSQTFPSEEDFAKEPAAVPSQLHLTVLGMENADEASSSKPQHVVLNHLFIEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR Homology
BLAST of ClCG03G014360 vs. NCBI nr
Match: XP_038880301.1 (SNF1-related protein kinase regulatory subunit beta-1 [Benincasa hispida]) HSP 1 Score: 558.5 bits (1438), Expect = 3.3e-155 Identity = 277/290 (95.52%), Postives = 281/290 (96.90%), Query Frame = 0
BLAST of ClCG03G014360 vs. NCBI nr
Match: XP_008451036.1 (PREDICTED: SNF1-related protein kinase regulatory subunit beta-1 [Cucumis melo] >TYK09943.1 SNF1-related protein kinase regulatory subunit beta-1 [Cucumis melo var. makuwa]) HSP 1 Score: 540.8 bits (1392), Expect = 7.2e-150 Identity = 272/290 (93.79%), Postives = 277/290 (95.52%), Query Frame = 0
BLAST of ClCG03G014360 vs. NCBI nr
Match: KAA0055694.1 (SNF1-related protein kinase regulatory subunit beta-1 [Cucumis melo var. makuwa]) HSP 1 Score: 537.7 bits (1384), Expect = 6.1e-149 Identity = 271/290 (93.45%), Postives = 276/290 (95.17%), Query Frame = 0
BLAST of ClCG03G014360 vs. NCBI nr
Match: XP_004144095.1 (SNF1-related protein kinase regulatory subunit beta-1 [Cucumis sativus] >KGN66385.1 hypothetical protein Csa_006859 [Cucumis sativus]) HSP 1 Score: 527.7 bits (1358), Expect = 6.3e-146 Identity = 264/290 (91.03%), Postives = 274/290 (94.48%), Query Frame = 0
BLAST of ClCG03G014360 vs. NCBI nr
Match: KAG6588137.1 (SNF1-related protein kinase regulatory subunit beta-1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 517.7 bits (1332), Expect = 6.5e-143 Identity = 256/290 (88.28%), Postives = 267/290 (92.07%), Query Frame = 0
BLAST of ClCG03G014360 vs. ExPASy Swiss-Prot
Match: Q84VQ1 (SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX=3702 GN=KINB1 PE=1 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 4.9e-93 Identity = 174/290 (60.00%), Postives = 211/290 (72.76%), Query Frame = 0
BLAST of ClCG03G014360 vs. ExPASy Swiss-Prot
Match: Q9SCY5 (SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX=3702 GN=KINB2 PE=1 SV=1) HSP 1 Score: 273.5 bits (698), Expect = 2.8e-72 Identity = 143/295 (48.47%), Postives = 195/295 (66.10%), Query Frame = 0
BLAST of ClCG03G014360 vs. ExPASy Swiss-Prot
Match: Q9QZH4 (5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Prkab2 PE=1 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.9e-28 Identity = 77/215 (35.81%), Postives = 114/215 (53.02%), Query Frame = 0
BLAST of ClCG03G014360 vs. ExPASy Swiss-Prot
Match: Q6PAM0 (5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab2 PE=1 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 2.5e-28 Identity = 77/215 (35.81%), Postives = 114/215 (53.02%), Query Frame = 0
BLAST of ClCG03G014360 vs. ExPASy Swiss-Prot
Match: O43741 (5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2 PE=1 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 5.5e-28 Identity = 76/216 (35.19%), Postives = 115/216 (53.24%), Query Frame = 0
BLAST of ClCG03G014360 vs. ExPASy TrEMBL
Match: A0A5D3CDJ6 (SNF1-related protein kinase regulatory subunit beta-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00700 PE=3 SV=1) HSP 1 Score: 540.8 bits (1392), Expect = 3.5e-150 Identity = 272/290 (93.79%), Postives = 277/290 (95.52%), Query Frame = 0
BLAST of ClCG03G014360 vs. ExPASy TrEMBL
Match: A0A1S3BQK7 (SNF1-related protein kinase regulatory subunit beta-1 OS=Cucumis melo OX=3656 GN=LOC103492444 PE=3 SV=1) HSP 1 Score: 540.8 bits (1392), Expect = 3.5e-150 Identity = 272/290 (93.79%), Postives = 277/290 (95.52%), Query Frame = 0
BLAST of ClCG03G014360 vs. ExPASy TrEMBL
Match: A0A5A7UKJ0 (SNF1-related protein kinase regulatory subunit beta-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G00750 PE=3 SV=1) HSP 1 Score: 537.7 bits (1384), Expect = 2.9e-149 Identity = 271/290 (93.45%), Postives = 276/290 (95.17%), Query Frame = 0
BLAST of ClCG03G014360 vs. ExPASy TrEMBL
Match: A0A0A0LWX6 (AMPKBI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G600250 PE=3 SV=1) HSP 1 Score: 527.7 bits (1358), Expect = 3.0e-146 Identity = 264/290 (91.03%), Postives = 274/290 (94.48%), Query Frame = 0
BLAST of ClCG03G014360 vs. ExPASy TrEMBL
Match: A0A6J1F546 (SNF1-related protein kinase regulatory subunit beta-1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111440954 PE=3 SV=1) HSP 1 Score: 514.6 bits (1324), Expect = 2.7e-142 Identity = 255/290 (87.93%), Postives = 266/290 (91.72%), Query Frame = 0
BLAST of ClCG03G014360 vs. TAIR 10
Match: AT5G21170.1 (5'-AMP-activated protein kinase beta-2 subunit protein ) HSP 1 Score: 342.4 bits (877), Expect = 3.5e-94 Identity = 174/290 (60.00%), Postives = 211/290 (72.76%), Query Frame = 0
BLAST of ClCG03G014360 vs. TAIR 10
Match: AT5G21170.2 (5'-AMP-activated protein kinase beta-2 subunit protein ) HSP 1 Score: 323.9 bits (829), Expect = 1.3e-88 Identity = 174/327 (53.21%), Postives = 211/327 (64.53%), Query Frame = 0
BLAST of ClCG03G014360 vs. TAIR 10
Match: AT4G16360.1 (5'-AMP-activated protein kinase beta-2 subunit protein ) HSP 1 Score: 273.1 bits (697), Expect = 2.6e-73 Identity = 134/258 (51.94%), Postives = 179/258 (69.38%), Query Frame = 0
BLAST of ClCG03G014360 vs. TAIR 10
Match: AT4G16360.3 (5'-AMP-activated protein kinase beta-2 subunit protein ) HSP 1 Score: 273.1 bits (697), Expect = 2.6e-73 Identity = 134/258 (51.94%), Postives = 179/258 (69.38%), Query Frame = 0
BLAST of ClCG03G014360 vs. TAIR 10
Match: AT4G16360.2 (5'-AMP-activated protein kinase beta-2 subunit protein ) HSP 1 Score: 267.3 bits (682), Expect = 1.4e-71 Identity = 133/258 (51.55%), Postives = 179/258 (69.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|