ClCG03G009630 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG03G009630
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Regulator of Vps4 activity in the MVB pathway protein
Location	CG_Chr03: 14758898 .. 14759819 (-)
RNA-Seq Expression	ClCG03G009630
Synteny	ClCG03G009630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAGAGAAAACACAGTACACACACATCTGGATTTCATCTTATTCGTTAAGCTTTCAATGTCACTCCTCAATCAACTCTTTAACAGAGGTGTCTTTGCCGGAAAATGGTCAGCTTCCGATTCTTCTAACTCTAAACCCTCTCACTATTTCATTGACTATTGTTGAATTTTGGTTTTGATCCTCAGCACTACTTTGAATTCTTTTGGAATTGTTATCTTTCCATTGGATTTGCTGTTCGTAGGAGATCTTTTTGTTTCGTTAACTTACGAGACCCAATACGCACAAACCGAATTTGGCTTGTGATCAGTACTAACTTTCGTTCGCTCAAAATTTGACAATTTTATATATAGAACTATTTTCTAGTTTTTGTACAATTTCGGCTATTGAATTTTGGTTTATGGCATTTTCCCTTTACCATCTTTTAATTAGACTGGGTTATTCTGATTTAACAAAATTTTATGTCGAAATGTCTAATCAAACAACCTGTTTGCGTCTTTTGGACAAATATTTATGTACTGATTTGCTGATAGCATCCCTTGCATTTTTCTGGGAGTGATAAGTGTCATATAAAATGGATGTTTTTGTAGCAAAACTTGCTTGAGCTTGGCAATCTCGCGGATCAAGTTGTTGCAGAATAAGAGGGATCTGCAACTGAAGCATATGCGCAAGGAGATTGCACAATTCTTGCAGACAGGGCAGGAACCAATAGCTCAAATTCGGGTACGCTTTAGAATTTTGGTGTCAGTACACTAATGTCTATCAGTTCAAATGTTTGTTTTACTATCTAGTAAATAACATGCATTATCTGTTTGGGCAGGTGGAGCATGTAATACGGGAACAAAACATATGGGCTGCATATGAAATTCTAGAGTTGTTTTGTGAATTTGTTCTCGCTCGTGTCCCGATCATCGAAAGCCAG

mRNA sequence

AAAAAAAGAGAAAACACAGTACACACACATCTGGATTTCATCTTATTCGTTAAGCTTTCAATGTCACTCCTCAATCAACTCTTTAACAGAGGTGTCTTTGCCGGAAAATGCACTACTTTGAATTCTTTTGGAATTGTTATCTTTCCATTGGATTTGCTGTTCGTAGGAGATCTTTTTGTTTCCAAAACTTGCTTGAGCTTGGCAATCTCGCGGATCAAGTTGTTGCAGAATAAGAGGGATCTGCAACTGAAGCATATGCGCAAGGAGATTGCACAATTCTTGCAGACAGGGCAGGAACCAATAGCTCAAATTCGGGTGGAGCATGTAATACGGGAACAAAACATATGGGCTGCATATGAAATTCTAGAGTTGTTTTGTGAATTTGTTCTCGCTCGTGTCCCGATCATCGAAAGCCAG

Coding sequence (CDS)

ATGTCACTCCTCAATCAACTCTTTAACAGAGGTGTCTTTGCCGGAAAATGCACTACTTTGAATTCTTTTGGAATTGTTATCTTTCCATTGGATTTGCTGTTCGTAGGAGATCTTTTTGTTTCCAAAACTTGCTTGAGCTTGGCAATCTCGCGGATCAAGTTGTTGCAGAATAAGAGGGATCTGCAACTGAAGCATATGCGCAAGGAGATTGCACAATTCTTGCAGACAGGGCAGGAACCAATAGCTCAAATTCGGGTGGAGCATGTAATACGGGAACAAAACATATGGGCTGCATATGAAATTCTAGAGTTGTTTTGTGAATTTGTTCTCGCTCGTGTCCCGATCATCGAAAGCCAG

Protein sequence

MSLLNQLFNRGVFAGKCTTLNSFGIVIFPLDLLFVGDLFVSKTCLSLAISRIKLLQNKRDLQLKHMRKEIAQFLQTGQEPIAQIRVEHVIREQNIWAAYEILELFCEFVLARVPIIESQ

Homology

[Close]

BLAST of ClCG03G009630 vs. NCBI nr
Match: XP_023538831.1 (IST1 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 171.4 bits (433), Expect = 4.7e-39
Identity = 94/119 (78.99%), Postives = 95/119 (79.83%), Query Frame = 0


Query: 1   MSLLNQLFNRGVFAGKCTTLNSFGIVIFPLDLLFVGDLFVSKTCLSLAISRIKLLQNKRD 60
           MSLLNQLFNRGVFAGKC                        KTCLSLAISRIKLLQNKRD
Sbjct: 1   MSLLNQLFNRGVFAGKC------------------------KTCLSLAISRIKLLQNKRD 60

Query: 61  LQLKHMRKEIAQFLQTGQEPIAQIRVEHVIREQNIWAAYEILELFCEFVLARVPIIESQ 120
           LQLKHMRKEIAQFLQTGQEPIA+IRVEHVIREQNIWAAYEILELFCEFVLARVPIIESQ
Sbjct: 61  LQLKHMRKEIAQFLQTGQEPIARIRVEHVIREQNIWAAYEILELFCEFVLARVPIIESQ 95

[Close]

BLAST of ClCG03G009630 vs. NCBI nr
Match: XP_022921725.1 (IST1 homolog isoform X1 [Cucurbita moschata])

HSP 1 Score: 171.4 bits (433), Expect = 4.7e-39
Identity = 94/119 (78.99%), Postives = 95/119 (79.83%), Query Frame = 0


Query: 1   MSLLNQLFNRGVFAGKCTTLNSFGIVIFPLDLLFVGDLFVSKTCLSLAISRIKLLQNKRD 60
           MSLLNQLFNRGVFAGKC                        KTCLSLAISRIKLLQNKRD
Sbjct: 1   MSLLNQLFNRGVFAGKC------------------------KTCLSLAISRIKLLQNKRD 60

Query: 61  LQLKHMRKEIAQFLQTGQEPIAQIRVEHVIREQNIWAAYEILELFCEFVLARVPIIESQ 120
           LQLKHMRKEIAQFLQTGQEPIA+IRVEHVIREQNIWAAYEILELFCEFVLARVPIIESQ
Sbjct: 61  LQLKHMRKEIAQFLQTGQEPIARIRVEHVIREQNIWAAYEILELFCEFVLARVPIIESQ 95

[Close]

BLAST of ClCG03G009630 vs. NCBI nr
Match: KAG6601778.1 (IST1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 171.4 bits (433), Expect = 4.7e-39
Identity = 94/119 (78.99%), Postives = 95/119 (79.83%), Query Frame = 0


Query: 1   MSLLNQLFNRGVFAGKCTTLNSFGIVIFPLDLLFVGDLFVSKTCLSLAISRIKLLQNKRD 60
           MSLLNQLFNRGVFAGKC                        KTCLSLAISRIKLLQNKRD
Sbjct: 1   MSLLNQLFNRGVFAGKC------------------------KTCLSLAISRIKLLQNKRD 60

Query: 61  LQLKHMRKEIAQFLQTGQEPIAQIRVEHVIREQNIWAAYEILELFCEFVLARVPIIESQ 120
           LQLKHMRKEIAQFLQTGQEPIA+IRVEHVIREQNIWAAYEILELFCEFVLARVPIIESQ
Sbjct: 61  LQLKHMRKEIAQFLQTGQEPIARIRVEHVIREQNIWAAYEILELFCEFVLARVPIIESQ 95

[Close]

BLAST of ClCG03G009630 vs. NCBI nr
Match: KAG7032495.1 (IST1-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 171.4 bits (433), Expect = 4.7e-39
Identity = 94/119 (78.99%), Postives = 95/119 (79.83%), Query Frame = 0


Query: 1   MSLLNQLFNRGVFAGKCTTLNSFGIVIFPLDLLFVGDLFVSKTCLSLAISRIKLLQNKRD 60
           MSLLNQLFNRGVFAGKC                        KTCLSLAISRIKLLQNKRD
Sbjct: 1   MSLLNQLFNRGVFAGKC------------------------KTCLSLAISRIKLLQNKRD 60

Query: 61  LQLKHMRKEIAQFLQTGQEPIAQIRVEHVIREQNIWAAYEILELFCEFVLARVPIIESQ 120
           LQLKHMRKEIAQFLQTGQEPIA+IRVEHVIREQNIWAAYEILELFCEFVLARVPIIESQ
Sbjct: 61  LQLKHMRKEIAQFLQTGQEPIARIRVEHVIREQNIWAAYEILELFCEFVLARVPIIESQ 95

[Close]

BLAST of ClCG03G009630 vs. NCBI nr
Match: XP_038875452.1 (IST1 homolog [Benincasa hispida])

HSP 1 Score: 169.9 bits (429), Expect = 1.4e-38
Identity = 92/119 (77.31%), Postives = 95/119 (79.83%), Query Frame = 0


Query: 1   MSLLNQLFNRGVFAGKCTTLNSFGIVIFPLDLLFVGDLFVSKTCLSLAISRIKLLQNKRD 60
           MSLLNQLFNRGVFAGKC                        KTCLSLAISRIKLLQNKRD
Sbjct: 1   MSLLNQLFNRGVFAGKC------------------------KTCLSLAISRIKLLQNKRD 60

Query: 61  LQLKHMRKEIAQFLQTGQEPIAQIRVEHVIREQNIWAAYEILELFCEFVLARVPIIESQ 120
           LQLKHMRKEIAQFLQTGQ+PIA+IRVEHVIREQN+WAAYEILELFCEFVLARVPIIESQ
Sbjct: 61  LQLKHMRKEIAQFLQTGQQPIARIRVEHVIREQNVWAAYEILELFCEFVLARVPIIESQ 95

[Close]

BLAST of ClCG03G009630 vs. ExPASy Swiss-Prot
Match: Q3ZBV1 (IST1 homolog OS=Bos taurus OX=9913 GN=IST1 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 9.6e-11
Identity = 36/74 (48.65%), Postives = 52/74 (70.27%), Query Frame = 0


Query: 45  LSLAISRIKLLQNKRDLQLKHMRKEIAQFLQTGQEPIAQIRVEHVIREQNIWAAYEILEL 104
           L L I+R+KLL+ K+    +  RKEIA +L  G++  A+IRVEH+IRE  +  A EILEL
Sbjct: 15  LRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILEL 74

Query: 105 FCEFVLARVPIIES 119
           +C+ +LAR  +I+S
Sbjct: 75  YCDLLLARFGLIQS 88

[Close]

BLAST of ClCG03G009630 vs. ExPASy Swiss-Prot
Match: P53990 (IST1 homolog OS=Homo sapiens OX=9606 GN=IST1 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 9.6e-11
Identity = 36/74 (48.65%), Postives = 52/74 (70.27%), Query Frame = 0


Query: 45  LSLAISRIKLLQNKRDLQLKHMRKEIAQFLQTGQEPIAQIRVEHVIREQNIWAAYEILEL 104
           L L I+R+KLL+ K+    +  RKEIA +L  G++  A+IRVEH+IRE  +  A EILEL
Sbjct: 15  LRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILEL 74

Query: 105 FCEFVLARVPIIES 119
           +C+ +LAR  +I+S
Sbjct: 75  YCDLLLARFGLIQS 88

[Close]

BLAST of ClCG03G009630 vs. ExPASy Swiss-Prot
Match: Q9CX00 (IST1 homolog OS=Mus musculus OX=10090 GN=Ist1 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 9.6e-11
Identity = 36/74 (48.65%), Postives = 52/74 (70.27%), Query Frame = 0


Query: 45  LSLAISRIKLLQNKRDLQLKHMRKEIAQFLQTGQEPIAQIRVEHVIREQNIWAAYEILEL 104
           L L I+R+KLL+ K+    +  RKEIA +L  G++  A+IRVEH+IRE  +  A EILEL
Sbjct: 15  LRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILEL 74

Query: 105 FCEFVLARVPIIES 119
           +C+ +LAR  +I+S
Sbjct: 75  YCDLLLARFGLIQS 88

[Close]

BLAST of ClCG03G009630 vs. ExPASy Swiss-Prot
Match: Q5R6G8 (IST1 homolog OS=Pongo abelii OX=9601 GN=IST1 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 9.6e-11
Identity = 36/74 (48.65%), Postives = 52/74 (70.27%), Query Frame = 0


Query: 45  LSLAISRIKLLQNKRDLQLKHMRKEIAQFLQTGQEPIAQIRVEHVIREQNIWAAYEILEL 104
           L L I+R+KLL+ K+    +  RKEIA +L  G++  A+IRVEH+IRE  +  A EILEL
Sbjct: 15  LRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILEL 74

Query: 105 FCEFVLARVPIIES 119
           +C+ +LAR  +I+S
Sbjct: 75  YCDLLLARFGLIQS 88

[Close]

BLAST of ClCG03G009630 vs. ExPASy Swiss-Prot
Match: Q568Z6 (IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 9.6e-11
Identity = 36/74 (48.65%), Postives = 52/74 (70.27%), Query Frame = 0


Query: 45  LSLAISRIKLLQNKRDLQLKHMRKEIAQFLQTGQEPIAQIRVEHVIREQNIWAAYEILEL 104
           L L I+R+KLL+ K+    +  RKEIA +L  G++  A+IRVEH+IRE  +  A EILEL
Sbjct: 15  LRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILEL 74

Query: 105 FCEFVLARVPIIES 119
           +C+ +LAR  +I+S
Sbjct: 75  YCDLLLARFGLIQS 88

[Close]

BLAST of ClCG03G009630 vs. ExPASy TrEMBL
Match: A0A6J1E6L9 (IST1 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429884 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.3e-39
Identity = 94/119 (78.99%), Postives = 95/119 (79.83%), Query Frame = 0


Query: 1   MSLLNQLFNRGVFAGKCTTLNSFGIVIFPLDLLFVGDLFVSKTCLSLAISRIKLLQNKRD 60
           MSLLNQLFNRGVFAGKC                        KTCLSLAISRIKLLQNKRD
Sbjct: 1   MSLLNQLFNRGVFAGKC------------------------KTCLSLAISRIKLLQNKRD 60

Query: 61  LQLKHMRKEIAQFLQTGQEPIAQIRVEHVIREQNIWAAYEILELFCEFVLARVPIIESQ 120
           LQLKHMRKEIAQFLQTGQEPIA+IRVEHVIREQNIWAAYEILELFCEFVLARVPIIESQ
Sbjct: 61  LQLKHMRKEIAQFLQTGQEPIARIRVEHVIREQNIWAAYEILELFCEFVLARVPIIESQ 95

[Close]

BLAST of ClCG03G009630 vs. ExPASy TrEMBL
Match: A0A6J1I9L3 (IST1 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470489 PE=3 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.5e-38
Identity = 93/119 (78.15%), Postives = 95/119 (79.83%), Query Frame = 0


Query: 1   MSLLNQLFNRGVFAGKCTTLNSFGIVIFPLDLLFVGDLFVSKTCLSLAISRIKLLQNKRD 60
           MSLLNQLFNRGVFAGKC                        KTCLSLAISRIKLLQNKRD
Sbjct: 1   MSLLNQLFNRGVFAGKC------------------------KTCLSLAISRIKLLQNKRD 60

Query: 61  LQLKHMRKEIAQFLQTGQEPIAQIRVEHVIREQNIWAAYEILELFCEFVLARVPIIESQ 120
           LQLK+MRKEIAQFLQTGQEPIA+IRVEHVIREQNIWAAYEILELFCEFVLARVPIIESQ
Sbjct: 61  LQLKNMRKEIAQFLQTGQEPIARIRVEHVIREQNIWAAYEILELFCEFVLARVPIIESQ 95

[Close]

BLAST of ClCG03G009630 vs. ExPASy TrEMBL
Match: A0A6J1DR13 (IST1 homolog OS=Momordica charantia OX=3673 GN=LOC111022352 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 3.3e-38
Identity = 92/119 (77.31%), Postives = 93/119 (78.15%), Query Frame = 0


Query: 1   MSLLNQLFNRGVFAGKCTTLNSFGIVIFPLDLLFVGDLFVSKTCLSLAISRIKLLQNKRD 60
           MSLLNQLFNRGVFAGKC                        KTCLSLAISRIKLLQNKRD
Sbjct: 1   MSLLNQLFNRGVFAGKC------------------------KTCLSLAISRIKLLQNKRD 60

Query: 61  LQLKHMRKEIAQFLQTGQEPIAQIRVEHVIREQNIWAAYEILELFCEFVLARVPIIESQ 120
           LQLKHM KEIAQFLQ GQEPIA+IRVEHVIREQNIWAAYEILELFCEFVLARVPIIESQ
Sbjct: 61  LQLKHMHKEIAQFLQAGQEPIARIRVEHVIREQNIWAAYEILELFCEFVLARVPIIESQ 95

[Close]

BLAST of ClCG03G009630 vs. ExPASy TrEMBL
Match: A0A6J1BIC6 (IST1 homolog OS=Herrania umbratica OX=108875 GN=LOC110427627 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.8e-37
Identity = 89/119 (74.79%), Postives = 92/119 (77.31%), Query Frame = 0


Query: 1   MSLLNQLFNRGVFAGKCTTLNSFGIVIFPLDLLFVGDLFVSKTCLSLAISRIKLLQNKRD 60
           MSLLNQLFNRGVF  KC                        KTCLSLAISRIKLLQNKRD
Sbjct: 1   MSLLNQLFNRGVFGAKC------------------------KTCLSLAISRIKLLQNKRD 60

Query: 61  LQLKHMRKEIAQFLQTGQEPIAQIRVEHVIREQNIWAAYEILELFCEFVLARVPIIESQ 120
           LQLKHMRKEIAQFLQ GQEPIA+IRVEH+IREQNIWAAYEILELFCEFVLARVPI+ESQ
Sbjct: 61  LQLKHMRKEIAQFLQAGQEPIARIRVEHIIREQNIWAAYEILELFCEFVLARVPILESQ 95

[Close]

BLAST of ClCG03G009630 vs. ExPASy TrEMBL
Match: A0A061ED43 (Regulator of Vps4 activity in the MVB pathway protein OS=Theobroma cacao OX=3641 GN=TCM_009773 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.8e-37
Identity = 89/119 (74.79%), Postives = 92/119 (77.31%), Query Frame = 0


Query: 1   MSLLNQLFNRGVFAGKCTTLNSFGIVIFPLDLLFVGDLFVSKTCLSLAISRIKLLQNKRD 60
           MSLLNQLFNRGVF  KC                        KTCLSLAISRIKLLQNKRD
Sbjct: 1   MSLLNQLFNRGVFGAKC------------------------KTCLSLAISRIKLLQNKRD 60

Query: 61  LQLKHMRKEIAQFLQTGQEPIAQIRVEHVIREQNIWAAYEILELFCEFVLARVPIIESQ 120
           LQLKHMRKEIAQFLQ GQEPIA+IRVEH+IREQNIWAAYEILELFCEFVLARVPI+ESQ
Sbjct: 61  LQLKHMRKEIAQFLQAGQEPIARIRVEHIIREQNIWAAYEILELFCEFVLARVPILESQ 95

[Close]

BLAST of ClCG03G009630 vs. TAIR 10
Match: AT1G25420.1 (Regulator of Vps4 activity in the MVB pathway protein )

HSP 1 Score: 149.1 bits (375), Expect = 2.3e-36
Identity = 78/119 (65.55%), Postives = 89/119 (74.79%), Query Frame = 0


Query: 1   MSLLNQLFNRGVFAGKCTTLNSFGIVIFPLDLLFVGDLFVSKTCLSLAISRIKLLQNKRD 60
           MSLLNQLFNRG+F  KC                        KT L+LAI+R+KLLQNKRD
Sbjct: 1   MSLLNQLFNRGIFGAKC------------------------KTSLNLAIARMKLLQNKRD 60

Query: 61  LQLKHMRKEIAQFLQTGQEPIAQIRVEHVIREQNIWAAYEILELFCEFVLARVPIIESQ 120
           +QLKHM+KEIA FLQ GQEPIA+IRVEHVIRE N+WAAYEILELFCEF+LARVPI+ES+
Sbjct: 61  MQLKHMKKEIAHFLQAGQEPIARIRVEHVIREMNLWAAYEILELFCEFILARVPILESE 95

[Close]

BLAST of ClCG03G009630 vs. TAIR 10
Match: AT1G34220.1 (Regulator of Vps4 activity in the MVB pathway protein )

HSP 1 Score: 104.4 bits (259), Expect = 6.6e-23
Identity = 57/119 (47.90%), Postives = 75/119 (63.03%), Query Frame = 0


Query: 1   MSLLNQLFNRGVFAGKCTTLNSFGIVIFPLDLLFVGDLFVSKTCLSLAISRIKLLQNKRD 60
           MS+L+  FN+G  A KC                        KT L L I RIKL++N+R+
Sbjct: 1   MSMLDSFFNKGFKAAKC------------------------KTLLKLTIPRIKLIRNRRE 60

Query: 61  LQLKHMRKEIAQFLQTGQEPIAQIRVEHVIREQNIWAAYEILELFCEFVLARVPIIESQ 120
            Q+K MR+EIA+ L+TGQE  A+IRVEH+IRE+ + AA EILELFCE +  R+PIIE+Q
Sbjct: 61  AQIKQMRREIAKLLETGQEATARIRVEHIIREEKMMAAQEILELFCELIAVRLPIIEAQ 95

[Close]

BLAST of ClCG03G009630 vs. TAIR 10
Match: AT1G34220.2 (Regulator of Vps4 activity in the MVB pathway protein )

HSP 1 Score: 104.4 bits (259), Expect = 6.6e-23
Identity = 57/119 (47.90%), Postives = 75/119 (63.03%), Query Frame = 0


Query: 1   MSLLNQLFNRGVFAGKCTTLNSFGIVIFPLDLLFVGDLFVSKTCLSLAISRIKLLQNKRD 60
           MS+L+  FN+G  A KC                        KT L L I RIKL++N+R+
Sbjct: 1   MSMLDSFFNKGFKAAKC------------------------KTLLKLTIPRIKLIRNRRE 60

Query: 61  LQLKHMRKEIAQFLQTGQEPIAQIRVEHVIREQNIWAAYEILELFCEFVLARVPIIESQ 120
            Q+K MR+EIA+ L+TGQE  A+IRVEH+IRE+ + AA EILELFCE +  R+PIIE+Q
Sbjct: 61  AQIKQMRREIAKLLETGQEATARIRVEHIIREEKMMAAQEILELFCELIAVRLPIIEAQ 95

[Close]

BLAST of ClCG03G009630 vs. TAIR 10
Match: AT2G19710.1 (Regulator of Vps4 activity in the MVB pathway protein )

HSP 1 Score: 90.5 bits (223), Expect = 9.8e-19
Identity = 40/78 (51.28%), Postives = 64/78 (82.05%), Query Frame = 0


Query: 42  KTCLSLAISRIKLLQNKRDLQLKHMRKEIAQFLQTGQEPIAQIRVEHVIREQNIWAAYEI 101
           KT L +A SR+K+L+NK+++Q+K +R+E+AQ L++GQ P A+IRVEHV+RE+   AAYE+
Sbjct: 15  KTALQMANSRLKILKNKKEIQIKQLRRELAQLLESGQTPTARIRVEHVVREEKTVAAYEL 74

Query: 102 LELFCEFVLARVPIIESQ 120
           + ++CE ++ R+ +IESQ
Sbjct: 75  IGIYCELLVVRLGVIESQ 92

[Close]

BLAST of ClCG03G009630 vs. TAIR 10
Match: AT4G35730.1 (Regulator of Vps4 activity in the MVB pathway protein )

HSP 1 Score: 89.4 bits (220), Expect = 2.2e-18
Identity = 45/78 (57.69%), Postives = 62/78 (79.49%), Query Frame = 0


Query: 42  KTCLSLAISRIKLLQNKRDLQLKHMRKEIAQFLQTGQEPIAQIRVEHVIREQNIWAAYEI 101
           KT   +A++RIKL++NKR + +K MR++IA  LQ+GQ+  A+IRVEHVIREQNI AA EI
Sbjct: 32  KTAAKMAVARIKLIRNKRLVVVKQMRRDIAVLLQSGQDATARIRVEHVIREQNIQAANEI 91

Query: 102 LELFCEFVLARVPIIESQ 120
           +ELFCE +++R+ II  Q
Sbjct: 92  IELFCELIVSRLTIITKQ 109

The following BLAST results are available for this feature:

BLAST of ClCG03G009630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538831.1	4.7e-39	78.99	IST1 homolog isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022921725.1	4.7e-39	78.99	IST1 homolog isoform X1 [Cucurbita moschata]	[more]
KAG6601778.1	4.7e-39	78.99	IST1-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7032495.1	4.7e-39	78.99	IST1-like protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038875452.1	1.4e-38	77.31	IST1 homolog [Benincasa hispida]	[more]

BLAST of ClCG03G009630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3ZBV1	9.6e-11	48.65	IST1 homolog OS=Bos taurus OX=9913 GN=IST1 PE=2 SV=1	[more]
P53990	9.6e-11	48.65	IST1 homolog OS=Homo sapiens OX=9606 GN=IST1 PE=1 SV=1	[more]
Q9CX00	9.6e-11	48.65	IST1 homolog OS=Mus musculus OX=10090 GN=Ist1 PE=1 SV=1	[more]
Q5R6G8	9.6e-11	48.65	IST1 homolog OS=Pongo abelii OX=9601 GN=IST1 PE=2 SV=1	[more]
Q568Z6	9.6e-11	48.65	IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1	[more]

BLAST of ClCG03G009630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E6L9	2.3e-39	78.99	IST1 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429884 PE=3 SV=1	[more]
A0A6J1I9L3	1.5e-38	78.15	IST1 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470489 PE=3 SV=1	[more]
A0A6J1DR13	3.3e-38	77.31	IST1 homolog OS=Momordica charantia OX=3673 GN=LOC111022352 PE=3 SV=1	[more]
A0A6J1BIC6	2.8e-37	74.79	IST1 homolog OS=Herrania umbratica OX=108875 GN=LOC110427627 PE=3 SV=1	[more]
A0A061ED43	2.8e-37	74.79	Regulator of Vps4 activity in the MVB pathway protein OS=Theobroma cacao OX=3641...	[more]

BLAST of ClCG03G009630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G25420.1	2.3e-36	65.55	Regulator of Vps4 activity in the MVB pathway protein	[more]
AT1G34220.1	6.6e-23	47.90	Regulator of Vps4 activity in the MVB pathway protein	[more]
AT1G34220.2	6.6e-23	47.90	Regulator of Vps4 activity in the MVB pathway protein	[more]
AT2G19710.1	9.8e-19	51.28	Regulator of Vps4 activity in the MVB pathway protein	[more]
AT4G35730.1	2.2e-18	57.69	Regulator of Vps4 activity in the MVB pathway protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005061	Vacuolar protein sorting-associated protein Ist1	PFAM	PF03398	Ist1	coord: 42..119 e-value: 4.6E-27 score: 94.9
IPR005061	Vacuolar protein sorting-associated protein Ist1	PANTHER	PTHR12161	IST1 FAMILY MEMBER	coord: 42..119
IPR042277	Vacuolar protein sorting-associated protein IST1-like	GENE3D	1.20.1260.60		coord: 40..119 e-value: 6.4E-31 score: 109.3
None	No IPR available	PANTHER	PTHR12161:SF5	IST1 HOMOLOG	coord: 42..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG03G009630.1	ClCG03G009630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport