ClCG01G018880 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCCGATGAATCGCCCCTGAGCTGGCGTGGTTTTGGCAGATAAATTTTCTATATAATATAATATGTAGAAGAAGAAAATAAACTCCACATTCCACATTCCACAATAACACAACCATGGCTTCCAAATCTGCCCTCTTCCTCTCCATTCTCCTCTCCTTCTCTGCCATAGCTTTCTCCGATGTATTTCCACTAACTCTCTTCATATCTGGAATTATAAAAAGAAAATGACTGATACGCATTTTGGATTTGGTTGTTGCAGGATCCAGATTGCGTGTACACGATGTATATCAGAACAGGGTCGATCCTGAAAGCAGGGACGGACTCGGTGATTTCCGCCACGCTCTACACGGCGGAGGGGGACGGAATCCGGATCAAGGATCTGGAGAAATGGGGCGGGTTGATGGGACCCGACTATAACTACTTCGAGAGGGGCAATCTGGACATTTTCAGCGGAAGAGGTCCATGCCTGAGCGCACCCGTGTGTTCATTGAACCTGACCTCCGATGGATCGGGTCCGCACCATGGGTGGTACTGCAACTATGTGGAGGTGACCACAACGGGGGTTCACGGGTCGTGTAACCAAGCCCTGTTCACGGTGGAGCAGTGGTTGGCCCTTGATACGTCGCCGTATAGTCTTACCGCCATCCGGAATAACTGCCCCAGTGGGAGTGGAAGCCGCCGTGATTTGATCCGGTCGGGTGAGCCCAGTTTGAGATTGAAGCAGGTGGTATGAATTTGATGGGTGTATGTAGTATGTAATAAAATTGTTGTAGAAGAAGGTAAGCGAAAGAGGGCTTAATCGATGATTAAGCAGGATTTATCTGGAATTAAATCAAATGGGTGTATGTTTTTATTGGTATTTTGGGCGAGGATTAATGGTTAAATGGAGAGTAGTGTGTTTTGTCTTAGCTTTACTTTTTGATCCGATCTTGTTTGTCAGGAATCATGAACAATGGCTTTACAGTTTACAATACGAAAAGGAGCAATAATGAAAATCACAGCATTTAATTTCAATAATCAAATCGGATGTCGGCAAGAGGGACGTGGAGGGGTGTCCGTCAGAAAGCGCTTTGTCTTCG GTCCGATGAATCGCCCCTGAGCTGGCGTGGTTTTGGCAGATAAATTTTCTATATAATATAATATGTAGAAGAAGAAAATAAACTCCACATTCCACATTCCACAATAACACAACCATGGCTTCCAAATCTGCCCTCTTCCTCTCCATTCTCCTCTCCTTCTCTGCCATAGCTTTCTCCGATGATCCAGATTGCGTGTACACGATGTATATCAGAACAGGGTCGATCCTGAAAGCAGGGACGGACTCGGTGATTTCCGCCACGCTCTACACGGCGGAGGGGGACGGAATCCGGATCAAGGATCTGGAGAAATGGGGCGGGTTGATGGGACCCGACTATAACTACTTCGAGAGGGGCAATCTGGACATTTTCAGCGGAAGAGGTCCATGCCTGAGCGCACCCGTGTGTTCATTGAACCTGACCTCCGATGGATCGGGTCCGCACCATGGGTGGTACTGCAACTATGTGGAGGTGACCACAACGGGGGTTCACGGGTCGTGTAACCAAGCCCTGTTCACGGTGGAGCAGTGGTTGGCCCTTGATACGTCGCCGTATAGTCTTACCGCCATCCGGAATAACTGCCCCAGTGGGAGTGGAAGCCGCCGTGATTTGATCCGGTCGGGTGAGCCCAGTTTGAGATTGAAGCAGGTGGTATGAATTTGATGGGTGTATGTAGTATGTAATAAAATTGTTGTAGAAGAAGGTAAGCGAAAGAGGGCTTAATCGATGATTAAGCAGGATTTATCTGGAATTAAATCAAATGGGTGTATGTTTTTATTGGTATTTTGGGCGAGGATTAATGGTTAAATGGAGAGTAGTGTGTTTTGTCTTAGCTTTACTTTTTGATCCGATCTTGTTTGTCAGGAATCATGAACAATGGCTTTACAGTTTACAATACGAAAAGGAGCAATAATGAAAATCACAGCATTTAATTTCAATAATCAAATCGGATGTCGGCAAGAGGGACGTGGAGGGGTGTCCGTCAGAAAGCGCTTTGTCTTCG ATGGCTTCCAAATCTGCCCTCTTCCTCTCCATTCTCCTCTCCTTCTCTGCCATAGCTTTCTCCGATGATCCAGATTGCGTGTACACGATGTATATCAGAACAGGGTCGATCCTGAAAGCAGGGACGGACTCGGTGATTTCCGCCACGCTCTACACGGCGGAGGGGGACGGAATCCGGATCAAGGATCTGGAGAAATGGGGCGGGTTGATGGGACCCGACTATAACTACTTCGAGAGGGGCAATCTGGACATTTTCAGCGGAAGAGGTCCATGCCTGAGCGCACCCGTGTGTTCATTGAACCTGACCTCCGATGGATCGGGTCCGCACCATGGGTGGTACTGCAACTATGTGGAGGTGACCACAACGGGGGTTCACGGGTCGTGTAACCAAGCCCTGTTCACGGTGGAGCAGTGGTTGGCCCTTGATACGTCGCCGTATAGTCTTACCGCCATCCGGAATAACTGCCCCAGTGGGAGTGGAAGCCGCCGTGATTTGATCCGGTCGGGTGAGCCCAGTTTGAGATTGAAGCAGGTGGTATGA MASKSALFLSILLSFSAIAFSDDPDCVYTMYIRTGSILKAGTDSVISATLYTAEGDGIRIKDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYVEVTTTGVHGSCNQALFTVEQWLALDTSPYSLTAIRNNCPSGSGSRRDLIRSGEPSLRLKQVV Homology
BLAST of ClCG01G018880 vs. NCBI nr
Match: XP_008440608.1 (PREDICTED: lipoxygenase homology domain-containing protein 1 [Cucumis melo] >KAA0036292.1 lipoxygenase-like proteiny domain-containing protein 1 [Cucumis melo var. makuwa] >TYK12686.1 lipoxygenase-like proteiny domain-containing protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 331.6 bits (849), Expect = 4.1e-87 Identity = 158/179 (88.27%), Postives = 166/179 (92.74%), Query Frame = 0
BLAST of ClCG01G018880 vs. NCBI nr
Match: XP_004143473.2 (PLAT domain-containing protein 1 [Cucumis sativus] >KGN48760.1 hypothetical protein Csa_003522 [Cucumis sativus]) HSP 1 Score: 327.0 bits (837), Expect = 1.0e-85 Identity = 157/181 (86.74%), Postives = 168/181 (92.82%), Query Frame = 0
BLAST of ClCG01G018880 vs. NCBI nr
Match: XP_038883182.1 (PLAT domain-containing protein 3 [Benincasa hispida]) HSP 1 Score: 313.2 bits (801), Expect = 1.5e-81 Identity = 149/176 (84.66%), Postives = 157/176 (89.20%), Query Frame = 0
BLAST of ClCG01G018880 vs. NCBI nr
Match: XP_023002987.1 (PLAT domain-containing protein 1-like [Cucurbita maxima]) HSP 1 Score: 310.1 bits (793), Expect = 1.3e-80 Identity = 155/182 (85.16%), Postives = 161/182 (88.46%), Query Frame = 0
BLAST of ClCG01G018880 vs. NCBI nr
Match: XP_023517016.1 (PLAT domain-containing protein 3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 308.5 bits (789), Expect = 3.7e-80 Identity = 154/182 (84.62%), Postives = 162/182 (89.01%), Query Frame = 0
BLAST of ClCG01G018880 vs. ExPASy Swiss-Prot
Match: O65660 (PLAT domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=PLAT1 PE=1 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 8.0e-62 Identity = 110/159 (69.18%), Postives = 128/159 (80.50%), Query Frame = 0
BLAST of ClCG01G018880 vs. ExPASy Swiss-Prot
Match: Q9SIE7 (PLAT domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLAT2 PE=2 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 6.4e-59 Identity = 108/160 (67.50%), Postives = 125/160 (78.12%), Query Frame = 0
BLAST of ClCG01G018880 vs. ExPASy Swiss-Prot
Match: Q2V2V3 (PLAT domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLAT3 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 3.2e-34 Identity = 68/104 (65.38%), Postives = 76/104 (73.08%), Query Frame = 0
BLAST of ClCG01G018880 vs. ExPASy TrEMBL
Match: A0A5A7SYJ2 (Lipoxygenase-like proteiny domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002740 PE=4 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 2.0e-87 Identity = 158/179 (88.27%), Postives = 166/179 (92.74%), Query Frame = 0
BLAST of ClCG01G018880 vs. ExPASy TrEMBL
Match: A0A1S3B1J7 (lipoxygenase homology domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC103484981 PE=4 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 2.0e-87 Identity = 158/179 (88.27%), Postives = 166/179 (92.74%), Query Frame = 0
BLAST of ClCG01G018880 vs. ExPASy TrEMBL
Match: A0A0A0KGA0 (PLAT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G500520 PE=4 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 4.9e-86 Identity = 157/181 (86.74%), Postives = 168/181 (92.82%), Query Frame = 0
BLAST of ClCG01G018880 vs. ExPASy TrEMBL
Match: A0A6J1KL50 (PLAT domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111496734 PE=4 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 6.1e-81 Identity = 155/182 (85.16%), Postives = 161/182 (88.46%), Query Frame = 0
BLAST of ClCG01G018880 vs. ExPASy TrEMBL
Match: A0A6J1HHM4 (PLAT domain-containing protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111463559 PE=4 SV=1) HSP 1 Score: 305.4 bits (781), Expect = 1.5e-79 Identity = 152/182 (83.52%), Postives = 160/182 (87.91%), Query Frame = 0
BLAST of ClCG01G018880 vs. TAIR 10
Match: AT4G39730.1 (Lipase/lipooxygenase, PLAT/LH2 family protein ) HSP 1 Score: 238.0 bits (606), Expect = 5.7e-63 Identity = 110/159 (69.18%), Postives = 128/159 (80.50%), Query Frame = 0
BLAST of ClCG01G018880 vs. TAIR 10
Match: AT2G22170.1 (Lipase/lipooxygenase, PLAT/LH2 family protein ) HSP 1 Score: 228.4 bits (581), Expect = 4.5e-60 Identity = 108/160 (67.50%), Postives = 125/160 (78.12%), Query Frame = 0
BLAST of ClCG01G018880 vs. TAIR 10
Match: AT5G65158.1 (Lipase/lipooxygenase, PLAT/LH2 family protein ) HSP 1 Score: 146.4 bits (368), Expect = 2.3e-35 Identity = 68/104 (65.38%), Postives = 76/104 (73.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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