ClCG01G017670 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTCTCTCTCTCTCTCTCTATTTCAATTTTAAAATTGAAAAAGAAAAAAATATTTATCTTTTTTGTTTCAAATTATTTATCTTCTTATTGTTGTTGTCTTGTTGGTGGTTTAAGCGTTTAAGGTGATCTAAAAAACGTCACGTCCTTTGTTCAGAGTGGAGATTCTTGACGTGCATCGTGGAAAGAGCAATCAAAGAAGGCGTCAGAACTCATTTACTCCCAATATATATCATAATCTCTGGCTCGCTCCATCGTGTGTAGTCTTCAAAAATTAAGCCACTCCGATCCCAAACGCACGCACTTGGAATTGTGTTTGAGTTGAGAGAATGGGGAACTGTCAGGCGGCGGAGGCGGCGACGGTGGTGATTCAGCACCCTGGGAATCAAAAGATCGAGAGGATTTATTGGTCGGTAAGTGCACACGAAATCATGAACTCTAACCCCGGCCATTACGTTGCCCTCCTTCTCACCTCCTCCACTATGAAGACCGAAAATGGAAACCCAATTAAGCAGCTCAAGCTCCTCCGCCCCGATGACACGCTTCTCATCGGCCACGTTTATCGTCTCATCACATTCGAAGGTATTTTCCCTTTTTCTTTAACTATATACTTACTCATTATGAAATATCTTTATACATCTCTCGATTATTATAAAATGTACAAAGTTTCGTTTTTCTTTTTCTTTTTCTTTTTTTTAAAAAAAAAAGAAAAAGAAAAGAAAAGAACTTGTAGGACCCTACATCATTGTGGTAGTCTTAAATAATTTATCTTTACTTTGAGCTTTAAATCACACACATATAGATGTATATTTTTTTTTGAAACTCTAAATTTAAATTTTTGTAAGGGATTCTAAATTGTAAACTTAAAATACAATTTGGGTCACACCTATTTTTATTTTTATGCATTCTACCAAACTATCCAATAATAATTAGACAAGTGACAAATTTTTATATTTGTTGTGAAATATTTTAATTTTTTTTTTTTTTTTTTTTTGTTTATAGGAGTAAAAAAGATACCTAATTTAATTATTAGTTGACATTTTTAAAAATAAATAGATAACCGTATTTTGAACTTACATAAAATGATTTTTTTTTTTTGTTTTAATAATATGAGGAGGTCAAACTATAGCTTCGAAGTTAAAAATGTATTTTATGCTAGTTGAGACATGCTCATTTTGACAGATAAAATGGTTTTTGGAACAAATTGCCAACTAGCAACTATGTTTAACACTTGGTTATTATTATTATTTTGTTGATATGTGAGTTGGTGTCCATCCCTGACAAGATTGAATCAACTAAATGAATAAAATTCAACTATTATATATATATATATATTAGTAATTAAGAAGTCTATGATTCGAATATATCATGATATTGTACTAAAAAAGATTGGATCAACCCATATTTTGTTTATTATTACTCATGTCAAATGTTTTTTTTTTTTTTCATCTGAAAGATGTACTGAAGGAGTTTGCTGCAAAGAAATGTGTGAAATTAGGGAAGTTGCTGAAAGAGGGAGGAGCGCTTTCGGTTGGGATGAAGATGAAGGGCTCAGATTCTGCTTCAAATCCAAATGCTAATTCTAATTCCGAAAATTACATGAAGGTAATCAAATACCCATAACCCTTAATCATACTCCAAATCCCAAAAAGTGGATCTTTTTTATTTTTTAAAAAAATCCCATTGGTTTAGGAAAATATTGCGATTTATTGAATTTCGTTTTCATGATTGCACTCTGATTAAAGCCAAAAAATAAAAGAAAAAACAAAAAGTTGTTTTTCTGAATAAAGAAGCATCTGAAATTGGTTTGAAATTTAAGGCCACGGATATCGAGGGAAAAGGCTTTTTATGGGTCACTTCATGAATCTTGTCAGAAATTGAAGTAGAGCTGTATAGTGCACAGGTATTTATTTTTATTTCTTAAGTCAAATATTCACTCAACCCATTTTTTTTTCTTTTCTGAAAATTCAACCCCATTATAAATTAATTAGGATTGAAAGAAAGAAAATAAATAAATAAAAGAAGAAAATTTTAATCAGCTTTTGCAAGCATTCCCTGCATGCTGTGTCTTGTGGATTTAGAAAAGGGAACAAAAAAAAGGAGAAAAAAAAAAAAACAGTTTGCTTAACTTAAAAGTTGAATTAATTATTCAAGGGACCAAATCATAATGGGCCTTTGCCTGTATATTGAAACTAACTCATTTTGAATTTGAGTTCCATTTCCCACTGACTTCAACAACAATTTAAGCATTTAAATTTACTATAATCTTTTGAAACCTTTAGCTAGTGGGGCTCTTTTCAAAACAACACTTTCTTTTTCCCCCTAAATCGAAATAACATGGCCTTTTCTTTGATCATAATCATAAAGTTGAAAGATATTTATTGGTTTCCTGTTTGCAAAGTCTAAATCCAATATCTTCAAATCAACGTGAACATTCCTACTTTTTCATCATTGGGGTCAAATCAAAACATGATATGCTAAAATCATTCTTTTGATCAATATGGTCAGGCGGAGCAGGTTGCCGGGCATAGCAACGCCGGAAGCAGCGGCGGTGGAAGAGGCGGAGGAGGACAAAGAGGTATGGGAAGGCATTATGGTGGTGGAAGTCAATGGAGGCCAGCTTTACAGAGCATTGCAGAAATTGAAATTAATTGAATAAGAAAAAAGGAAAAGGAAAAAGAAAAGGCAATATGAGCACAAAACAAACACTGCCATGAATATGATTAATTTTCAACTGCAAATTGGCCTTTCGCTTTTCATCGTCTTCAATGAATAATTTACCGGAAGAAGTTAACGTCAAAAACCCAACCTCTATCTTTATATACCTTTTATATTTTTCTGTCTATAATTTAGATACGTCTCTTTGTGTATTTGCAGTAGTACTTAGTTCTTTCCATCTAAACTTTGCACCTTTTTTCATTTGGAAATTCGTGTACGGAACTTCATTAGTTGAGATGCTTTAGTTTTTTATAACATTTTTTTTTAATGTAAAT CTCTCTCTCTCTCTCTCTCTATTTCAATTTTAAAATTGAAAAAGAAAAAAATATTTATCTTTTTTGTTTCAAATTATTTATCTTCTTATTGTTGTTGTCTTGTTGGTGGTTTAAGCGTTTAAGGTGATCTAAAAAACGTCACGTCCTTTGTTCAGAGTGGAGATTCTTGACGTGCATCGTGGAAAGAGCAATCAAAGAAGGCGTCAGAACTCATTTACTCCCAATATATATCATAATCTCTGGCTCGCTCCATCGTGTGTAGTCTTCAAAAATTAAGCCACTCCGATCCCAAACGCACGCACTTGGAATTGTGTTTGAGTTGAGAGAATGGGGAACTGTCAGGCGGCGGAGGCGGCGACGGTGGTGATTCAGCACCCTGGGAATCAAAAGATCGAGAGGATTTATTGGTCGGTAAGTGCACACGAAATCATGAACTCTAACCCCGGCCATTACGTTGCCCTCCTTCTCACCTCCTCCACTATGAAGACCGAAAATGGAAACCCAATTAAGCAGCTCAAGCTCCTCCGCCCCGATGACACGCTTCTCATCGGCCACGTTTATCGTCTCATCACATTCGAAGATGTACTGAAGGAGTTTGCTGCAAAGAAATGTGTGAAATTAGGGAAGTTGCTGAAAGAGGGAGGAGCGCTTTCGGTTGGGATGAAGATGAAGGGCTCAGATTCTGCTTCAAATCCAAATGCTAATTCTAATTCCGAAAATTACATGAAGGCGGAGCAGGTTGCCGGGCATAGCAACGCCGGAAGCAGCGGCGGTGGAAGAGGCGGAGGAGGACAAAGAGGTATGGGAAGGCATTATGGTGGTGGAAGTCAATGGAGGCCAGCTTTACAGAGCATTGCAGAAATTGAAATTAATTGAATAAGAAAAAAGGAAAAGGAAAAAGAAAAGGCAATATGAGCACAAAACAAACACTGCCATGAATATGATTAATTTTCAACTGCAAATTGGCCTTTCGCTTTTCATCGTCTTCAATGAATAATTTACCGGAAGAAGTTAACGTCAAAAACCCAACCTCTATCTTTATATACCTTTTATATTTTTCTGTCTATAATTTAGATACGTCTCTTTGTGTATTTGCAGTAGTACTTAGTTCTTTCCATCTAAACTTTGCACCTTTTTTCATTTGGAAATTCGTGTACGGAACTTCATTAGTTGAGATGCTTTAGTTTTTTATAACATTTTTTTTTAATGTAAAT ATGGGGAACTGTCAGGCGGCGGAGGCGGCGACGGTGGTGATTCAGCACCCTGGGAATCAAAAGATCGAGAGGATTTATTGGTCGGTAAGTGCACACGAAATCATGAACTCTAACCCCGGCCATTACGTTGCCCTCCTTCTCACCTCCTCCACTATGAAGACCGAAAATGGAAACCCAATTAAGCAGCTCAAGCTCCTCCGCCCCGATGACACGCTTCTCATCGGCCACGTTTATCGTCTCATCACATTCGAAGATGTACTGAAGGAGTTTGCTGCAAAGAAATGTGTGAAATTAGGGAAGTTGCTGAAAGAGGGAGGAGCGCTTTCGGTTGGGATGAAGATGAAGGGCTCAGATTCTGCTTCAAATCCAAATGCTAATTCTAATTCCGAAAATTACATGAAGGCGGAGCAGGTTGCCGGGCATAGCAACGCCGGAAGCAGCGGCGGTGGAAGAGGCGGAGGAGGACAAAGAGGTATGGGAAGGCATTATGGTGGTGGAAGTCAATGGAGGCCAGCTTTACAGAGCATTGCAGAAATTGAAATTAATTGA MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLLTSSTMKTENGNPIKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKMKGSDSASNPNANSNSENYMKAEQVAGHSNAGSSGGGRGGGGQRGMGRHYGGGSQWRPALQSIAEIEIN Homology
BLAST of ClCG01G017670 vs. NCBI nr
Match: XP_038883937.1 (uncharacterized protein LOC120074768 [Benincasa hispida]) HSP 1 Score: 325.1 bits (832), Expect = 3.9e-85 Identity = 171/183 (93.44%), Postives = 174/183 (95.08%), Query Frame = 0
BLAST of ClCG01G017670 vs. NCBI nr
Match: XP_004141857.1 (uncharacterized protein LOC101222947 [Cucumis sativus] >KGN48621.1 hypothetical protein Csa_004276 [Cucumis sativus]) HSP 1 Score: 316.2 bits (809), Expect = 1.8e-82 Identity = 168/186 (90.32%), Postives = 172/186 (92.47%), Query Frame = 0
BLAST of ClCG01G017670 vs. NCBI nr
Match: XP_016899236.1 (PREDICTED: uncharacterized protein LOC103484864 [Cucumis melo]) HSP 1 Score: 308.9 bits (790), Expect = 2.9e-80 Identity = 166/188 (88.30%), Postives = 173/188 (92.02%), Query Frame = 0
BLAST of ClCG01G017670 vs. NCBI nr
Match: XP_023003398.1 (uncharacterized protein LOC111497021 [Cucurbita maxima]) HSP 1 Score: 298.9 bits (764), Expect = 3.0e-77 Identity = 156/187 (83.42%), Postives = 169/187 (90.37%), Query Frame = 0
BLAST of ClCG01G017670 vs. NCBI nr
Match: XP_022963138.1 (uncharacterized protein LOC111463436 [Cucurbita moschata]) HSP 1 Score: 296.6 bits (758), Expect = 1.5e-76 Identity = 155/187 (82.89%), Postives = 169/187 (90.37%), Query Frame = 0
BLAST of ClCG01G017670 vs. ExPASy TrEMBL
Match: A0A0A0KLJ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495750 PE=4 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 8.7e-83 Identity = 168/186 (90.32%), Postives = 172/186 (92.47%), Query Frame = 0
BLAST of ClCG01G017670 vs. ExPASy TrEMBL
Match: A0A1S4DTC0 (uncharacterized protein LOC103484864 OS=Cucumis melo OX=3656 GN=LOC103484864 PE=4 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 1.4e-80 Identity = 166/188 (88.30%), Postives = 173/188 (92.02%), Query Frame = 0
BLAST of ClCG01G017670 vs. ExPASy TrEMBL
Match: A0A6J1KWE0 (uncharacterized protein LOC111497021 OS=Cucurbita maxima OX=3661 GN=LOC111497021 PE=4 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 1.4e-77 Identity = 156/187 (83.42%), Postives = 169/187 (90.37%), Query Frame = 0
BLAST of ClCG01G017670 vs. ExPASy TrEMBL
Match: A0A6J1HGV9 (uncharacterized protein LOC111463436 OS=Cucurbita moschata OX=3662 GN=LOC111463436 PE=4 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 7.2e-77 Identity = 155/187 (82.89%), Postives = 169/187 (90.37%), Query Frame = 0
BLAST of ClCG01G017670 vs. ExPASy TrEMBL
Match: A0A6J1GER4 (uncharacterized protein LOC111453516 OS=Cucurbita moschata OX=3662 GN=LOC111453516 PE=4 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 2.4e-72 Identity = 150/182 (82.42%), Postives = 161/182 (88.46%), Query Frame = 0
BLAST of ClCG01G017670 vs. TAIR 10
Match: AT5G67620.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: microtubule; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 189.1 bits (479), Expect = 3.1e-48 Identity = 109/191 (57.07%), Postives = 125/191 (65.45%), Query Frame = 0
BLAST of ClCG01G017670 vs. TAIR 10
Match: AT5G62900.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50090.1); Has 157 Blast hits to 157 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 99.8 bits (247), Expect = 2.5e-21 Identity = 75/181 (41.44%), Postives = 100/181 (55.25%), Query Frame = 0
BLAST of ClCG01G017670 vs. TAIR 10
Match: AT5G50090.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 99.0 bits (245), Expect = 4.2e-21 Identity = 71/183 (38.80%), Postives = 96/183 (52.46%), Query Frame = 0
BLAST of ClCG01G017670 vs. TAIR 10
Match: AT5G50090.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 98.6 bits (244), Expect = 5.5e-21 Identity = 72/189 (38.10%), Postives = 98/189 (51.85%), Query Frame = 0
BLAST of ClCG01G017670 vs. TAIR 10
Match: AT1G60010.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10530.1); Has 185 Blast hits to 185 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 180; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 87.4 bits (215), Expect = 1.3e-17 Identity = 69/191 (36.13%), Postives = 99/191 (51.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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