ClCG01G011330 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCCGACAAACCAAACGAGGTAGGCAAGCAGACGCCGAAACATCGCATGTTATCGGTGGATTTCGAGAAGGTTCGGAGGGAGATTCTAGTAACCCTCAGGTAAATATGGAAGATCAAATCTTTAATAGAATAGCCCAAGGGTTGGCATCTAGTGCTGAAACAGCTCAAGGAGATCCCGAGAGAAAGTATGAGATCAAGAGGTTCAAAGCCTTAGAAGCTCAGGTATTTGAGGGAATCACTGATCCTGAAGATGTCGAAGTATGACTAAACCAGATAGAGAAATGCTTCAGGGTCATGCGTTGTCCTGAAGAGAGGAAACTTGATTTGGTTACTTATTTGCTCTAGAAAGGAGTGGAGGATTGGTGGAAGTTGATAGAAAATAGGGGAAATGATGCAGATCCTCTAACGTGGGTAGCCTTTAAGAAGGCTTTTCAAGATAAATATTACCCACATACATATTGTGACGAGAAGAGGGATGAGTTTTTAAGATTGGTGCAAGGGATATGACTGTAGCTGAGTACGAAAAGAAGTTTACAAAGCTAGCTAAGTACGCTCTAACAATGATTGTGGATGAAGCTGATAAGTGCAAGTGTTTTGTGTTAGGTTTGCATAGTAAAATCCGTACTCCAGTTACAACAAGTATAGTGTGGACAAACTTTGCACGAATGATTGAGGCTGCCATGAGAGCTAAAAAGAGTATAACTGGTGGGAAGCCTGAGAGGGAAGGAAATAAAGGAGATTATAGAACGGGACAAGCTTTGGGTACATCTCGGGAACAGTCTTACCGAGGTGATAGTAGAAGGTTTGTACCCAGTGTTTCTAGTAATAGAAGTTTTAAAGCTTGATTTGGCGGATCATACTTTACAAGACCTAGAGGTGGTGGTTCAAGACAAACTCAGAGGGGTTTTCCTCAGACTTTGGGACCTCCAAGTGGTTCATAGTTTAGGCAACTGA ATGCCCGACAAACCAAACGAGGTAGGCAAGCAGACGCCGAAACATCGCATGTTATCGGTGGATTTCGAGAAGGTTCGGAGGGAGATTCTAGTAACCCTCAGTGCTGAAACAGCTCAAGGAGATCCCGAGAGAAAGTATGAGATCAAGAGGTTCAAAGCCTTAGAAGCTCAGGTATTTGAGGGAATCACTGATCCTGAAGATGTCGAAAAAGGAGTGGAGGATTGGTGGAAGTTGATAGAAAATAGGGGAAATGATGCAGATCCTCTAACGTGGATTGGTGCAAGGGATATGACTGTAGCTGAGTACGAAAAGAAGTTTACAAAGCTAGCTAAGTACGCTCTAACAATGATTGTGGATGAAGCTGATAAGTGCAAGTGTTTTGTGTTAGGTTTGCATAGTAAAATCCGTACTCCAGTTACAACAAGTATAGTGTGGACAAACTTTGCACGAATGATTGAGGCTGCCATGAGAGCTAAAAAGAGTATAACTGGTGGGAAGCCTGAGAGGGAAGGAAATAAAGGAGATTATAGAACGGGACAAGCTTTGGGTACATCTCGGGAACAGTCTTACCGAGGTGATAGTAGAAGGTTTGTACCCAGTGTTTCTAACCTAGAGGTGGTGGTTCAAGACAAACTCAGAGGGGTTTTCCTCAGACTTTGGGACCTCCAAGTGGTTCATAGTTTAGGCAACTGA ATGCCCGACAAACCAAACGAGGTAGGCAAGCAGACGCCGAAACATCGCATGTTATCGGTGGATTTCGAGAAGGTTCGGAGGGAGATTCTAGTAACCCTCAGTGCTGAAACAGCTCAAGGAGATCCCGAGAGAAAGTATGAGATCAAGAGGTTCAAAGCCTTAGAAGCTCAGGTATTTGAGGGAATCACTGATCCTGAAGATGTCGAAAAAGGAGTGGAGGATTGGTGGAAGTTGATAGAAAATAGGGGAAATGATGCAGATCCTCTAACGTGGATTGGTGCAAGGGATATGACTGTAGCTGAGTACGAAAAGAAGTTTACAAAGCTAGCTAAGTACGCTCTAACAATGATTGTGGATGAAGCTGATAAGTGCAAGTGTTTTGTGTTAGGTTTGCATAGTAAAATCCGTACTCCAGTTACAACAAGTATAGTGTGGACAAACTTTGCACGAATGATTGAGGCTGCCATGAGAGCTAAAAAGAGTATAACTGGTGGGAAGCCTGAGAGGGAAGGAAATAAAGGAGATTATAGAACGGGACAAGCTTTGGGTACATCTCGGGAACAGTCTTACCGAGGTGATAGTAGAAGGTTTGTACCCAGTGTTTCTAACCTAGAGGTGGTGGTTCAAGACAAACTCAGAGGGGTTTTCCTCAGACTTTGGGACCTCCAAGTGGTTCATAGTTTAGGCAACTGA MPDKPNEVGKQTPKHRMLSVDFEKVRREILVTLSAETAQGDPERKYEIKRFKALEAQVFEGITDPEDVEKGVEDWWKLIENRGNDADPLTWIGARDMTVAEYEKKFTKLAKYALTMIVDEADKCKCFVLGLHSKIRTPVTTSIVWTNFARMIEAAMRAKKSITGGKPEREGNKGDYRTGQALGTSREQSYRGDSRRFVPSVSNLEVVVQDKLRGVFLRLWDLQVVHSLGN Homology
BLAST of ClCG01G011330 vs. NCBI nr
Match: KAA0060484.1 (Gag protease polyprotein-like protein [Cucumis melo var. makuwa] >TYK18569.1 Gag protease polyprotein-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 123.2 bits (308), Expect = 2.8e-24 Identity = 76/225 (33.78%), Postives = 108/225 (48.00%), Query Frame = 0
BLAST of ClCG01G011330 vs. NCBI nr
Match: KAA0036813.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 122.5 bits (306), Expect = 4.8e-24 Identity = 75/196 (38.27%), Postives = 102/196 (52.04%), Query Frame = 0
BLAST of ClCG01G011330 vs. NCBI nr
Match: TYJ95881.1 (retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]) HSP 1 Score: 120.2 bits (300), Expect = 2.4e-23 Identity = 76/222 (34.23%), Postives = 106/222 (47.75%), Query Frame = 0
BLAST of ClCG01G011330 vs. NCBI nr
Match: KAA0035225.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK21839.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 115.9 bits (289), Expect = 4.5e-22 Identity = 68/171 (39.77%), Postives = 93/171 (54.39%), Query Frame = 0
BLAST of ClCG01G011330 vs. NCBI nr
Match: TYK15233.1 (uncharacterized protein E5676_scaffold892G00030 [Cucumis melo var. makuwa]) HSP 1 Score: 114.4 bits (285), Expect = 1.3e-21 Identity = 76/223 (34.08%), Postives = 105/223 (47.09%), Query Frame = 0
BLAST of ClCG01G011330 vs. ExPASy TrEMBL
Match: A0A5A7UZM6 (Gag protease polyprotein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00750 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 1.4e-24 Identity = 76/225 (33.78%), Postives = 108/225 (48.00%), Query Frame = 0
BLAST of ClCG01G011330 vs. ExPASy TrEMBL
Match: A0A5A7T1M0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G001070 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 2.3e-24 Identity = 75/196 (38.27%), Postives = 102/196 (52.04%), Query Frame = 0
BLAST of ClCG01G011330 vs. ExPASy TrEMBL
Match: A0A5D3DES5 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold991G00660 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 2.2e-22 Identity = 68/171 (39.77%), Postives = 93/171 (54.39%), Query Frame = 0
BLAST of ClCG01G011330 vs. ExPASy TrEMBL
Match: A0A5A7TBS0 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G002900 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 6.4e-22 Identity = 76/223 (34.08%), Postives = 105/223 (47.09%), Query Frame = 0
BLAST of ClCG01G011330 vs. ExPASy TrEMBL
Match: A0A5D3CTK6 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00030 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 6.4e-22 Identity = 76/223 (34.08%), Postives = 105/223 (47.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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