ClCG01G009265 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAAAATTTTTCTCTGAATGGCCTGTGGTTTTTGGTGGTTGTGATGGTGGTGGTTGTCAATGAAACTCAACAGGCGCAGGCAGTGAAATGCGACCCAAAAGAGCTAAGACCATGTCGTTTGGCCTTCAGAATGTCTATGGAGCCATCATTAGCTTGCTGCGACAAGGTGAAGGAGCACCAACCATGCTATTGTACATACATGAAAAATCCAAAGATTAAGCCCTATTTAGAATATGATGGCAGCAAAGATATCATTTCTCAATGTGGTGTATCCATCCCAACTTGCTAA ATGAAGAAAAATTTTTCTCTGAATGGCCTGTGGTTTTTGGTGGTTGTGATGGTGGTGGTTGTCAATGAAACTCAACAGGCGCAGGCAGTGAAATGCGACCCAAAAGAGCTAAGACCATGTCGTTTGGCCTTCAGAATGTCTATGGAGCCATCATTAGCTTGCTGCGACAAGGTGAAGGAGCACCAACCATGCTATTGTACATACATGAAAAATCCAAAGATTAAGCCCTATTTAGAATATGATGGCAGCAAAGATATCATTTCTCAATGTGGTGTATCCATCCCAACTTGCTAA ATGAAGAAAAATTTTTCTCTGAATGGCCTGTGGTTTTTGGTGGTTGTGATGGTGGTGGTTGTCAATGAAACTCAACAGGCGCAGGCAGTGAAATGCGACCCAAAAGAGCTAAGACCATGTCGTTTGGCCTTCAGAATGTCTATGGAGCCATCATTAGCTTGCTGCGACAAGGTGAAGGAGCACCAACCATGCTATTGTACATACATGAAAAATCCAAAGATTAAGCCCTATTTAGAATATGATGGCAGCAAAGATATCATTTCTCAATGTGGTGTATCCATCCCAACTTGCTAA MKKNFSLNGLWFLVVVMVVVVNETQQAQAVKCDPKELRPCRLAFRMSMEPSLACCDKVKEHQPCYCTYMKNPKIKPYLEYDGSKDIISQCGVSIPTC Homology
BLAST of ClCG01G009265 vs. NCBI nr
Match: KGN66906.1 (hypothetical protein Csa_006987 [Cucumis sativus]) HSP 1 Score: 131.3 bits (329), Expect = 4.4e-27 Identity = 58/91 (63.74%), Postives = 71/91 (78.02%), Query Frame = 0
BLAST of ClCG01G009265 vs. NCBI nr
Match: KAG8373754.1 (hypothetical protein BUALT_Bualt11G0058000 [Buddleja alternifolia]) HSP 1 Score: 99.4 bits (246), Expect = 1.8e-17 Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 0
BLAST of ClCG01G009265 vs. NCBI nr
Match: XP_038904866.1 (non-specific lipid-transfer protein 2-like [Benincasa hispida]) HSP 1 Score: 98.6 bits (244), Expect = 3.1e-17 Identity = 45/95 (47.37%), Postives = 58/95 (61.05%), Query Frame = 0
BLAST of ClCG01G009265 vs. NCBI nr
Match: XP_022143278.1 (non-specific lipid-transfer protein 2-like [Momordica charantia]) HSP 1 Score: 98.2 bits (243), Expect = 4.1e-17 Identity = 39/95 (41.05%), Postives = 59/95 (62.11%), Query Frame = 0
BLAST of ClCG01G009265 vs. NCBI nr
Match: GFP85330.1 (probable non-specific lipid-transfer protein akcs9 [Phtheirospermum japonicum]) HSP 1 Score: 96.7 bits (239), Expect = 1.2e-16 Identity = 41/87 (47.13%), Postives = 59/87 (67.82%), Query Frame = 0
BLAST of ClCG01G009265 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 3.6e-16 Identity = 37/97 (38.14%), Postives = 57/97 (58.76%), Query Frame = 0
BLAST of ClCG01G009265 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 6.0e-11 Identity = 26/63 (41.27%), Postives = 39/63 (61.90%), Query Frame = 0
BLAST of ClCG01G009265 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 2.3e-10 Identity = 24/68 (35.29%), Postives = 36/68 (52.94%), Query Frame = 0
BLAST of ClCG01G009265 vs. ExPASy Swiss-Prot
Match: A2XBN5 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP-2 PE=3 SV=2) HSP 1 Score: 57.8 bits (138), Expect = 8.1e-08 Identity = 20/66 (30.30%), Postives = 36/66 (54.55%), Query Frame = 0
BLAST of ClCG01G009265 vs. ExPASy Swiss-Prot
Match: Q10ST8 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LTP-2 PE=1 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 8.1e-08 Identity = 20/66 (30.30%), Postives = 36/66 (54.55%), Query Frame = 0
BLAST of ClCG01G009265 vs. ExPASy TrEMBL
Match: A0A0A0M3W7 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G711160 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 2.1e-27 Identity = 58/91 (63.74%), Postives = 71/91 (78.02%), Query Frame = 0
BLAST of ClCG01G009265 vs. ExPASy TrEMBL
Match: A0A6J1CQB8 (non-specific lipid-transfer protein 2-like OS=Momordica charantia OX=3673 GN=LOC111013188 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 2.0e-17 Identity = 39/95 (41.05%), Postives = 59/95 (62.11%), Query Frame = 0
BLAST of ClCG01G009265 vs. ExPASy TrEMBL
Match: A0A6P6A5B6 (non-specific lipid-transfer protein 2-like OS=Durio zibethinus OX=66656 GN=LOC111306313 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 7.6e-17 Identity = 42/95 (44.21%), Postives = 57/95 (60.00%), Query Frame = 0
BLAST of ClCG01G009265 vs. ExPASy TrEMBL
Match: A0A6J1D4R3 (non-specific lipid-transfer protein 2-like OS=Momordica charantia OX=3673 GN=LOC111016938 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 9.9e-17 Identity = 41/97 (42.27%), Postives = 59/97 (60.82%), Query Frame = 0
BLAST of ClCG01G009265 vs. ExPASy TrEMBL
Match: A0A6P6A579 (non-specific lipid-transfer protein 2-like OS=Durio zibethinus OX=66656 GN=LOC111306314 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 2.2e-16 Identity = 41/95 (43.16%), Postives = 56/95 (58.95%), Query Frame = 0
BLAST of ClCG01G009265 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 73.2 bits (178), Expect = 1.3e-13 Identity = 31/88 (35.23%), Postives = 50/88 (56.82%), Query Frame = 0
BLAST of ClCG01G009265 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 72.0 bits (175), Expect = 2.9e-13 Identity = 31/84 (36.90%), Postives = 44/84 (52.38%), Query Frame = 0
BLAST of ClCG01G009265 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 70.9 bits (172), Expect = 6.5e-13 Identity = 28/85 (32.94%), Postives = 46/85 (54.12%), Query Frame = 0
BLAST of ClCG01G009265 vs. TAIR 10
Match: AT5G38170.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 70.9 bits (172), Expect = 6.5e-13 Identity = 28/68 (41.18%), Postives = 39/68 (57.35%), Query Frame = 0
BLAST of ClCG01G009265 vs. TAIR 10
Match: AT5G38160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 65.9 bits (159), Expect = 2.1e-11 Identity = 32/93 (34.41%), Postives = 46/93 (49.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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