Chy9G166850 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAATGGGACTAAGGCCGTACACCCAGAGAACTGGCAATGGCTTGGGATCGCCTTCTTTTGACGTTGATCAAGGCGAGGTTCTCATGCACGTATTGCCCGCTGTCGGCATCGTATTCGATAATCGGCCTCCCGAGTTCCCCGGCACTCTCTACATCTCCTCCAGGTATCTTCCGCTTCATTTTGTTCCATACTCTCTGTTTTAGTGTAAGAAAATTTTGAGAATTAGGACCCCTTTTGTGTGGGGAGCTTCTATTTTATTGTTTTTTTTTTGTTAAGCGAGTGGAGAGGGTGTGTTGTGTTCTTCTTTTGTAAACGAAGGCCGTTTCTGAATCTTTGGATGAATAGTGTGCTGAATTTGATAATGAAATGTTCGATTGTGGGAATTTGGTGGCGAGTATGAGAAAGAAAATGGTTGTGGGTTGAGTTAAGAGGATTGGGAGTACTCTTGAGCTAAAGGAGATTAAGACGAAAGGGGACATTAAGAATGAATACTGAAAAATTCCTAGAAGGGAAAATGCCATGGGAAGTGTTGATTGCAGTTGAAACAGGGGGGCAAGAGGTACATTCCTTTGATGTCATTGTTTTTTAAGGCTCAGAAAAGTATGATTTCTTATCTATCTTGTTTTATGTGTTTCCATTCTTGGTGAGAGGTCTTGATTTTCTACATGTGCCTTTCCCTGAACAGTCGTGACAATAGTGTCTTCATTTTCAATGATTTGTTGGTTATCTCTTTAGATTTAATGTTAGAGTTTGCAGGTGGTTACTGTGTAGGCTTGCAATTGGGAAATTAGGATAGAAAGGACATCTGCAAATGTAGAGTGTGTCGGGACTTCTAAGTTCTCTTTAAGCTCTTTTGTAGTCACGATACACCTTTTTTAAGTTAATGCCAATTAAATGGATTTTTTGTCATAATACTCAATTGTAGGTGTGGTGTGGGAGGTTATTAGGTTTAATGTATCTTTTGTGTTTCCCTTCCTTCGTTAGCTTTTGTAACTATTAGCTCCGCGTTGTCTAATTCTTTTATGGTTGTAAGCCCTTCTTGATGTTAGTTTTGGGATTCGCTTTCTGGGATTGTTTGAGTTTGGTCTAATTCTTTTTGGGTTAGAGTCCCATATTAACGCTAGTTTTTAGATTCTTTGTTTGGGTTGTTTTTTGTATGTTCTTGGACATACTTCATTTTCGTCAGTATGAAAGCTCAGTTTCTAACTATATATATGTATTAATTGTCTATTATTTAATTGAACACGTCCTACAAAAAAAGAAAAAAAAAACTAATTGACCAACTTGCTGACTCATTGAGAACCTGATCATGTTTGTAGGCAAGTGGTTTGGTTGAGTGATGTGAACATGGCAAAAGGTTATGCAGTTGATTTTCTGTCCATGTCATTGCATGCAGTTTCAACAGACCCAGAGGCCTATACATCTCCTTGTTTGTATGTTCAGGTATTTACTTGTGCAGTTTTACATTATTCTCATTAATGTCGTATAGTTAAACAGATTCATTAGCAAAAAAGAGTAAGGATTGAGAGATGTGAAATCAAATTACTTGGTGTCTTATCCATAAAAAAGTTCCAGACATAGTAGAGGTAGGGTTGATGAGGAACAGTTGTAGATATCAGGGAGATAAGTTTCACGAGGGTGATGTGACCATGAAGATGCAAGAACCAAACTCGAATTTGAATCAGTATAATCAGATTTCATAATCCAGTTGTTGAGACAGATAGGGGTTTCTTCATTTTGCTGTATTAATGGAAACCGATGAGGTGGGATTGTGGCAGCTTTCTTGGAGGAATAAGATTGGGACTTGGGGTTAGTTTGCCTTTATGATTCGTGGGTAGAACAGTATGTTTAGTGTGCTGTTGGGATTGAAGTTGGAATTGGATAGATGAAAAAAAGAAAGATGTATCTATTTTTTCATTAGTGTATTGTTTAACCCTGATTTTTCTTTGGAGAAACTATTGGATCCTTCACACTTTGAGAACAAGGTGTGTTTTAATGGTTGGTTAATTTGAGCCCATCGGGCTTCAGGAAAATGTTACAGGCAGTTTAGTAATCAACTAAAAAGTTTGTTAGTAGGAGCCAAAAGGTGGTTACAATTGGATAGGTGGGTGAGGAGCATGAAAGCGAGCAATATCTAGTTGTTTGGGCTTGAGTCTATTCAGGAGAGGTGTATATACTTAAATTAGGAAGCAAGGCTCCAAGTCAAAATATCTCCTGTGTGGTAGGAGGAGACTTAGATAACCTTCTATAATTAGCTAGTCATAACTTGGTACCATAGTTTAGGAAGGTCGGCTTATTAATTATAGGAGTGTGGGACTTGGTCTCCCTTGAATAGTGGAGACTGGAAACTTTGTTTATCGTTTGTAACTAGATAAGTGTGGGAGAACACTAACTTGTGAAAGCATCCCATTCTTGGCAAACTCACTCTCTCTTGTGTAAACTAAGCGAGGTAGAACACGACGGCAAAGCATGCATCCATTCCACCCTCAAGTGTCAGACACATTCGAGGTCATGCAGTCACAATAGTTCCTTTCTTAGCCTCCCTGACTAGGGACTAGGAGTCACCTTCCCTTGGTATAGACCAGCCTGAACAACATTACAAGGAATTTATAGGCATCATATCTGGTCGCACATGTACTCTACCCGTCCTTGTCTACGATCTCACATGCAAGTAACCAGACCACAAGTCTAGTCTGGTGAAGAGTGCAACTAGCGTCAATATATCGAACAAATCAATCTCATTTGGGATCAGGCTCTTGTTCTTGACAATCACTTTTTTTAAGGTGTGTAATCTACGCACATGCACATAGATCCATCCCATCTCCTATGAGATAGAATTGGGGCCGCGTGGAGCTTTGGACGCCTTGGTCGATCAAACATCTGTCCAAATGCTGTTGAAGTTCAACCAACTCCCATGGAGACACAAGATATGGTGCTTTGGATGGGGGCTTGACTCCAAGTTCAAGCTCTATCTTATGGTTGATGTTGTTGAATGGAGAAAGAGTTCTAGGTAACTTTAGAGGCATTACATCATCATTATCCCGAAGAACTCTGGCCACAACTTTAGGCACTTACTCAAACTTAACTAGATTAATCTCATTCAAGGCGGCAAGGTGGGACTAGGAAACATTTCTACGTAGATTTTTCTTTTAAAAATGTTTGGACGTTAAATTTCCATGTTCGTATACTTTGAAGGGTTAGATATTTCAACATATACACATATATTTTTAAAAGATAACTAAAGATCACATGCCCTAAAACCCGTCTATGACCTACTTTTTCAGAAATGAACATGTCACCGTGTTCATAACATGTTAAATCTATGCCTCATGTAAGTGTCCATGCTTCTTATGATGTAAGTTTATCATACTTGCTTGTATACATTCCAACTTTTTGAGAAATCCAAGAGAAACATTTGATAAAAAATAGTTGTTTCCTATCTAGCAGTGTAAGTAAGGCTTGAATAAAATTCTTGCTCAACTATCTGCTTGTAGGCACCGTTAATTTTTGGTCCTTTATATTTTTTTTAATAACATTTTCCAAAAGCTTTTATTTCGCCTGCATCATTTCCTTTGCTGATTGTGTTTGAAGATTGATACTGGAGATGATGAAGAGTTAGAGAATTCAGATTCAGAATGTCATGGTGAAGAGTCTGAGAATTTTGACTTAGCTGCAGTTAGAGAGATGAGGCTTGTACCTTCGAATCCTAACGAATGTGTGTCTCTCCTCTTTTTTGTTTGATTGTGAAATGTTATTGGAATGTAGAATAATCTTTTTTTTTTTTTTTTTTTGCTATAGTAGAAACTCTGTTCGAGATATTCTGTCAGTGTGCTGAGCTTAATCCTGAACCAACTGGAGGTTAGTTCATTTTCATAATTGACCTCGGTTTCTATTTTCATACAACTAGTTGGTTCTTTTGGTATGAACTACCCGCTTCCTTCAGATGAAGAAGAAGAAGAGCACAACTGGTTTTTTGGTGCCGATCAGTTGGAACAGATGCCAGGTATGTAATCAATTAGATTGTATGATTCTCCTAAAGAACCACTTGTTACAGATGATATAAAATGCATCTTCTGTAATATTTAGGACTTTCGGTAGCAGGAGATGACGAAGAACAATTCTCCTCTATTCCACCAAGCTCAATCGGCCACTCAAATGGAGATCATGATCAACTAGCTCGCACAGTGCTTCAGGTATGATCATAAACGCATATCCCATCTGCTAAAGTATTCATTAGCAAACTCAATGAACACATTTTTTATTTTTGTTTTTGGCCTTTTTTCTTTCTATTGCTTTTCTGAGTGCTTTTGTTGCATAATGTTTAGCTTCAAATCAATGATCAACGTTTTGAGGACGCAGATGAGATGGAACCTGAAAACAATGGTAAGCATAGTTAG ATGACAATGGGACTAAGGCCGTACACCCAGAGAACTGGCAATGGCTTGGGATCGCCTTCTTTTGACGTTGATCAAGGCGAGGTTCTCATGCACGTATTGCCCGCTGTCGGCATCGTATTCGATAATCGGCCTCCCGAGTTCCCCGGCACTCTCTACATCTCCTCCAGGCAAGTGGTTTGGTTGAGTGATGTGAACATGGCAAAAGGTTATGCAGTTGATTTTCTGTCCATGTCATTGCATGCAGTTTCAACAGACCCAGAGGCCTATACATCTCCTTGTTTGTATGTTCAGATTGATACTGGAGATGATGAAGAGTTAGAGAATTCAGATTCAGAATGTCATGGTGAAGAGTCTGAGAATTTTGACTTAGCTGCAGTTAGAGAGATGAGGCTTGTACCTTCGAATCCTAACGAATTAGAAACTCTGTTCGAGATATTCTGTCAGTGTGCTGAGCTTAATCCTGAACCAACTGGAGATGAAGAAGAAGAAGAGCACAACTGGTTTTTTGGTGCCGATCAGTTGGAACAGATGCCAGGACTTTCGGTAGCAGGAGATGACGAAGAACAATTCTCCTCTATTCCACCAAGCTCAATCGGCCACTCAAATGGAGATCATGATCAACTAGCTCGCACAGTGCTTCAGCTTCAAATCAATGATCAACGTTTTGAGGACGCAGATGAGATGGAACCTGAAAACAATGGTAAGCATAGTTAG ATGACAATGGGACTAAGGCCGTACACCCAGAGAACTGGCAATGGCTTGGGATCGCCTTCTTTTGACGTTGATCAAGGCGAGGTTCTCATGCACGTATTGCCCGCTGTCGGCATCGTATTCGATAATCGGCCTCCCGAGTTCCCCGGCACTCTCTACATCTCCTCCAGGCAAGTGGTTTGGTTGAGTGATGTGAACATGGCAAAAGGTTATGCAGTTGATTTTCTGTCCATGTCATTGCATGCAGTTTCAACAGACCCAGAGGCCTATACATCTCCTTGTTTGTATGTTCAGATTGATACTGGAGATGATGAAGAGTTAGAGAATTCAGATTCAGAATGTCATGGTGAAGAGTCTGAGAATTTTGACTTAGCTGCAGTTAGAGAGATGAGGCTTGTACCTTCGAATCCTAACGAATTAGAAACTCTGTTCGAGATATTCTGTCAGTGTGCTGAGCTTAATCCTGAACCAACTGGAGATGAAGAAGAAGAAGAGCACAACTGGTTTTTTGGTGCCGATCAGTTGGAACAGATGCCAGGACTTTCGGTAGCAGGAGATGACGAAGAACAATTCTCCTCTATTCCACCAAGCTCAATCGGCCACTCAAATGGAGATCATGATCAACTAGCTCGCACAGTGCTTCAGCTTCAAATCAATGATCAACGTTTTGAGGACGCAGATGAGATGGAACCTGAAAACAATGGTAAGCATAGTTAG MTMGLRPYTQRTGNGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVVWLSDVNMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDEELENSDSECHGEESENFDLAAVREMRLVPSNPNELETLFEIFCQCAELNPEPTGDEEEEEHNWFFGADQLEQMPGLSVAGDDEEQFSSIPPSSIGHSNGDHDQLARTVLQLQINDQRFEDADEMEPENNGKHS* Homology
BLAST of Chy9G166850 vs. ExPASy Swiss-Prot
Match: Q9LVA7 (Chloride conductance regulatory protein ICln OS=Arabidopsis thaliana OX=3702 GN=At5g62290 PE=2 SV=1) HSP 1 Score: 258.8 bits (660), Expect = 5.9e-68 Identity = 136/236 (57.63%), Postives = 167/236 (70.76%), Query Frame = 0
BLAST of Chy9G166850 vs. ExPASy Swiss-Prot
Match: Q61189 (Methylosome subunit pICln OS=Mus musculus OX=10090 GN=Clns1a PE=1 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.3e-14 Identity = 43/131 (32.82%), Postives = 74/131 (56.49%), Query Frame = 0
BLAST of Chy9G166850 vs. ExPASy Swiss-Prot
Match: Q04753 (Methylosome subunit pICln OS=Rattus norvegicus OX=10116 GN=Clns1a PE=1 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.2e-14 Identity = 43/131 (32.82%), Postives = 74/131 (56.49%), Query Frame = 0
BLAST of Chy9G166850 vs. ExPASy Swiss-Prot
Match: P35521 (Methylosome subunit pICln OS=Canis lupus familiaris OX=9615 GN=CLNS1A PE=1 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 2.4e-13 Identity = 43/131 (32.82%), Postives = 73/131 (55.73%), Query Frame = 0
BLAST of Chy9G166850 vs. ExPASy Swiss-Prot
Match: Q28678 (Methylosome subunit pICln OS=Oryctolagus cuniculus OX=9986 GN=CLNS1A PE=2 SV=2) HSP 1 Score: 77.0 bits (188), Expect = 3.2e-13 Identity = 41/131 (31.30%), Postives = 71/131 (54.20%), Query Frame = 0
BLAST of Chy9G166850 vs. ExPASy TrEMBL
Match: A0A0A0KPP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G171150 PE=3 SV=1) HSP 1 Score: 482.3 bits (1240), Expect = 1.2e-132 Identity = 234/236 (99.15%), Postives = 235/236 (99.58%), Query Frame = 0
BLAST of Chy9G166850 vs. ExPASy TrEMBL
Match: A0A5D3DBS0 (Chloride conductance regulatory protein ICln isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G001310 PE=3 SV=1) HSP 1 Score: 467.6 bits (1202), Expect = 3.1e-128 Identity = 228/238 (95.80%), Postives = 231/238 (97.06%), Query Frame = 0
BLAST of Chy9G166850 vs. ExPASy TrEMBL
Match: A0A1S3CTC6 (chloride conductance regulatory protein ICln isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504664 PE=3 SV=1) HSP 1 Score: 464.9 bits (1195), Expect = 2.0e-127 Identity = 227/238 (95.38%), Postives = 231/238 (97.06%), Query Frame = 0
BLAST of Chy9G166850 vs. ExPASy TrEMBL
Match: A0A1S3CUF8 (chloride conductance regulatory protein ICln isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504664 PE=3 SV=1) HSP 1 Score: 453.8 bits (1166), Expect = 4.6e-124 Identity = 224/238 (94.12%), Postives = 228/238 (95.80%), Query Frame = 0
BLAST of Chy9G166850 vs. ExPASy TrEMBL
Match: A0A6J1K1I5 (chloride conductance regulatory protein ICln OS=Cucurbita maxima OX=3661 GN=LOC111490870 PE=3 SV=1) HSP 1 Score: 408.7 bits (1049), Expect = 1.7e-110 Identity = 196/236 (83.05%), Postives = 214/236 (90.68%), Query Frame = 0
BLAST of Chy9G166850 vs. NCBI nr
Match: XP_004143651.1 (chloride conductance regulatory protein ICln isoform X1 [Cucumis sativus]) HSP 1 Score: 479 bits (1234), Expect = 8.99e-171 Identity = 234/236 (99.15%), Postives = 235/236 (99.58%), Query Frame = 0
BLAST of Chy9G166850 vs. NCBI nr
Match: XP_011654882.1 (chloride conductance regulatory protein ICln isoform X2 [Cucumis sativus]) HSP 1 Score: 468 bits (1205), Expect = 2.13e-166 Identity = 231/236 (97.88%), Postives = 232/236 (98.31%), Query Frame = 0
BLAST of Chy9G166850 vs. NCBI nr
Match: KAA0055130.1 (chloride conductance regulatory protein ICln isoform X1 [Cucumis melo var. makuwa] >TYK20729.1 chloride conductance regulatory protein ICln isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 465 bits (1196), Expect = 5.80e-165 Identity = 228/238 (95.80%), Postives = 231/238 (97.06%), Query Frame = 0
BLAST of Chy9G166850 vs. NCBI nr
Match: XP_008467268.1 (PREDICTED: chloride conductance regulatory protein ICln isoform X1 [Cucumis melo]) HSP 1 Score: 462 bits (1189), Expect = 6.77e-164 Identity = 227/238 (95.38%), Postives = 231/238 (97.06%), Query Frame = 0
BLAST of Chy9G166850 vs. NCBI nr
Match: XP_008467269.1 (PREDICTED: chloride conductance regulatory protein ICln isoform X2 [Cucumis melo]) HSP 1 Score: 451 bits (1160), Expect = 1.60e-159 Identity = 224/238 (94.12%), Postives = 228/238 (95.80%), Query Frame = 0
BLAST of Chy9G166850 vs. TAIR 10
Match: AT5G62290.2 (nucleotide-sensitive chloride conductance regulator (ICln) family protein ) HSP 1 Score: 260.8 bits (665), Expect = 1.1e-69 Identity = 135/235 (57.45%), Postives = 166/235 (70.64%), Query Frame = 0
BLAST of Chy9G166850 vs. TAIR 10
Match: AT5G62290.1 (nucleotide-sensitive chloride conductance regulator (ICln) family protein ) HSP 1 Score: 258.8 bits (660), Expect = 4.2e-69 Identity = 136/236 (57.63%), Postives = 167/236 (70.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|