Chy9G158770 (gene) Cucumber (hystrix) v1

Overview
NameChy9G158770
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionF-box protein
LocationchrH09: 1398560 .. 1399471 (-)
RNA-Seq ExpressionChy9G158770
SyntenyChy9G158770
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTCGTGAATGCAATTTCAAGATTCACTGTATCGATATTGATACAATGAGTTGTGTTGGCTCATTTGGATTTGAAGATGATCACAATCACTCGACTGTCTCAATTATCAGCTCTTGCCATGCTCTACTACTCATTTCCAAACTTATTGATACTGATGATTTATGTGAGGGCATATTAAATCCGATGACTAATGAGTTTTTTGAACTTCCTGAACGTGAATATGATGAGTCTAGTCCCTATTATGGATTTGGTTTCAACCCGAAGACAAAGGAGTACAAATTGTTCAGAGTTACCAAAAGGGATAGATATGAATTCTATAGTATAATGGAGATCATGAGGTTTGGTGATAGGAGTGGAACCAAGGAAGAATGGAGGCATTTTAAATGTCCACCAATTAACTTTGACGATCATGGTGCTTACTTGAATGGAGTTATCTATTGGATGGGAAAAGAAAAGGGAAAAGCGTATGTGATTTATGCTCTTGACGTTGAAACCGAACAAATGGAATTAGTTGCTGATTTAGAAGTTGGACCTCACAACTTCAGGTATAATGGGTACATAGCGACGTTAAATAAGAGTGTTTATGCATATGTTCCCATCGTTGGACCATGTTGTACTAAGATTCAAGTTTGGACGATGCAAGAAAAAAAATCGTGGATTAGAGAATTTGTTATGCATGATGAAGTATCAAGGGCTTTGAGGATGCCAATGCAATTGGTTAAAGTGTTGAAAGATGGAGAGAGATGGTTTTTTGTTGAAGGTAACATTCTTTGCTGTGATAAGACAGGGATGAACATCAAGACAGAATCATTATGGAATAGGAAAATTGAAACAAGATTTGATGGATTATGTCAAATAGAATCCTTGAATTTTGGATCTATTCAAAATATATTGGCAGGCTACCAATGA

mRNA sequence

ATGACTCGTGAATGCAATTTCAAGATTCACTGTATCGATATTGATACAATGAGTTGTGTTGGCTCATTTGGATTTGAAGATGATCACAATCACTCGACTGTCTCAATTATCAGCTCTTGCCATGCTCTACTACTCATTTCCAAACTTATTGATACTGATGATTTATGTGAGGGCATATTAAATCCGATGACTAATGAGTTTTTTGAACTTCCTGAACGTGAATATGATGAGTCTAGTCCCTATTATGGATTTGGTTTCAACCCGAAGACAAAGGAGTACAAATTGTTCAGAGTTACCAAAAGGGATAGATATGAATTCTATAGTATAATGGAGATCATGAGGTTTGGTGATAGGAGTGGAACCAAGGAAGAATGGAGGCATTTTAAATGTCCACCAATTAACTTTGACGATCATGGTGCTTACTTGAATGGAGTTATCTATTGGATGGGAAAAGAAAAGGGAAAAGCGTATGTGATTTATGCTCTTGACGTTGAAACCGAACAAATGGAATTAGTTGCTGATTTAGAAGTTGGACCTCACAACTTCAGGTATAATGGGTACATAGCGACGTTAAATAAGAGTGTTTATGCATATGTTCCCATCGTTGGACCATGTTGTACTAAGATTCAAGTTTGGACGATGCAAGAAAAAAAATCGTGGATTAGAGAATTTGTTATGCATGATGAAGTATCAAGGGCTTTGAGGATGCCAATGCAATTGGTTAAAGTGTTGAAAGATGGAGAGAGATGGTTTTTTGTTGAAGGTAACATTCTTTGCTGTGATAAGACAGGGATGAACATCAAGACAGAATCATTATGGAATAGGAAAATTGAAACAAGATTTGATGGATTATGTCAAATAGAATCCTTGAATTTTGGATCTATTCAAAATATATTGGCAGGCTACCAATGA

Coding sequence (CDS)

ATGACTCGTGAATGCAATTTCAAGATTCACTGTATCGATATTGATACAATGAGTTGTGTTGGCTCATTTGGATTTGAAGATGATCACAATCACTCGACTGTCTCAATTATCAGCTCTTGCCATGCTCTACTACTCATTTCCAAACTTATTGATACTGATGATTTATGTGAGGGCATATTAAATCCGATGACTAATGAGTTTTTTGAACTTCCTGAACGTGAATATGATGAGTCTAGTCCCTATTATGGATTTGGTTTCAACCCGAAGACAAAGGAGTACAAATTGTTCAGAGTTACCAAAAGGGATAGATATGAATTCTATAGTATAATGGAGATCATGAGGTTTGGTGATAGGAGTGGAACCAAGGAAGAATGGAGGCATTTTAAATGTCCACCAATTAACTTTGACGATCATGGTGCTTACTTGAATGGAGTTATCTATTGGATGGGAAAAGAAAAGGGAAAAGCGTATGTGATTTATGCTCTTGACGTTGAAACCGAACAAATGGAATTAGTTGCTGATTTAGAAGTTGGACCTCACAACTTCAGGTATAATGGGTACATAGCGACGTTAAATAAGAGTGTTTATGCATATGTTCCCATCGTTGGACCATGTTGTACTAAGATTCAAGTTTGGACGATGCAAGAAAAAAAATCGTGGATTAGAGAATTTGTTATGCATGATGAAGTATCAAGGGCTTTGAGGATGCCAATGCAATTGGTTAAAGTGTTGAAAGATGGAGAGAGATGGTTTTTTGTTGAAGGTAACATTCTTTGCTGTGATAAGACAGGGATGAACATCAAGACAGAATCATTATGGAATAGGAAAATTGAAACAAGATTTGATGGATTATGTCAAATAGAATCCTTGAATTTTGGATCTATTCAAAATATATTGGCAGGCTACCAATGA

Protein sequence

MTRECNFKIHCIDIDTMSCVGSFGFEDDHNHSTVSIISSCHALLLISKLIDTDDLCEGILNPMTNEFFELPEREYDESSPYYGFGFNPKTKEYKLFRVTKRDRYEFYSIMEIMRFGDRSGTKEEWRHFKCPPINFDDHGAYLNGVIYWMGKEKGKAYVIYALDVETEQMELVADLEVGPHNFRYNGYIATLNKSVYAYVPIVGPCCTKIQVWTMQEKKSWIREFVMHDEVSRALRMPMQLVKVLKDGERWFFVEGNILCCDKTGMNIKTESLWNRKIETRFDGLCQIESLNFGSIQNILAGYQ*
Homology
BLAST of Chy9G158770 vs. ExPASy Swiss-Prot
Match: Q9LPH0 (Putative F-box protein At1g53550 OS=Arabidopsis thaliana OX=3702 GN=At1g53550 PE=4 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 7.1e-10
Identity = 49/196 (25.00%), Postives = 94/196 (47.96%), Query Frame = 0

Query: 44  LLISKLIDTDDLCEGILNPMTNEFFELPEREYDESSP-------YYGFGFNPKTKEYKLF 103
           L+ S+ I+ + L   I NP T E+  LP++  +E +         Y FG++P  K++K+ 
Sbjct: 134 LICSQHIEENYLFALISNPTTGEYIALPKQRMEEMNSETIIEKVRYSFGYDPIDKQFKVL 193

Query: 104 RVT--KRDRYEFYSIMEIMRFGDRSGTKEEWRHFKCPPINF--DDHGAYLNGVIYWMGKE 163
           R+T   R  +E+ S  +++  G  +     WR+ +C  +++  +D G  +NGV+Y+  + 
Sbjct: 194 RITWLHRGSHEWSSEYQVLTLGFGN---ISWRNTQCCVVHYLLEDSGICINGVLYYPARL 253

Query: 164 KGKAYVIYALDVETEQMELVA---DLEVGPHNFRYNGYIATLNKSVYAYVPIVGPCC--- 221
             + Y I   DV TE+    +   D+ +          +  L+ S+  Y   +G C    
Sbjct: 254 DNRKYTIVCFDVMTEKFSFTSIDKDMTI----------MTNLSFSLIDYKGKLGACICDH 313

BLAST of Chy9G158770 vs. ExPASy Swiss-Prot
Match: Q9LM89 (Putative F-box protein At1g20657 OS=Arabidopsis thaliana OX=3702 GN=At1g20657 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.8e-06
Identity = 46/193 (23.83%), Postives = 84/193 (43.52%), Query Frame = 0

Query: 59  ILNPMTNEFFELPEREYDESSPYYGFGFNPKTKEYKLFRVTKRDRYEFYSIMEIMRFGDR 118
           I NP T E + LP  + + +     FG++P  KE+K+  +TK  ++  +   +++ FG  
Sbjct: 151 ICNPSTGESWPLPRVKTNRTIITSYFGYDPINKEFKVLCMTK-SKFGVFGEHQVLTFG-- 210

Query: 119 SGTKEEWRHFKCPPINFDD--------------HGAYLNGVIYWMGK---EKGKAYVIYA 178
           +G +  WR  KC   ++ D               G  +NGV+Y++G+   +      I  
Sbjct: 211 TGKELSWRKIKCDMAHYPDVVDYEASGYPRPLYDGICINGVLYYLGRVHDDLDGFPDIVC 270

Query: 179 LDVETEQMELV---------ADLEVGPHNFRYNGYIATLNKSVYAYVPIVGPCC---TKI 221
            D++ E+   +         + + + P    + G IA L  +       +GP     T I
Sbjct: 271 FDIKFEKFSYIKKANGMKRNSGVNLQPTLVNHKGKIAKLQAN-------IGPGSIRYTGI 330

BLAST of Chy9G158770 vs. ExPASy TrEMBL
Match: A0A0A0KUJ1 (FBA_3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G643280 PE=4 SV=1)

HSP 1 Score: 621.3 bits (1601), Expect = 2.1e-174
Identity = 287/303 (94.72%), Postives = 296/303 (97.69%), Query Frame = 0

Query: 1   MTRECNFKIHCIDIDTMSCVGSFGFEDDHNHSTVSIISSCHALLLISKLIDTDDLCEGIL 60
           MTRECNFKIHCIDIDTMSCVGSFGFEDDHNHSTVSI+SSCHALLLISKLIDTDDLCEGIL
Sbjct: 1   MTRECNFKIHCIDIDTMSCVGSFGFEDDHNHSTVSIVSSCHALLLISKLIDTDDLCEGIL 60

Query: 61  NPMTNEFFELPEREYDESSPYYGFGFNPKTKEYKLFRVTKRDRYEFYSIMEIMRFGDRSG 120
           NPMTNEF ELP+REYDESSPYYGFGFNPKTK+YKLFRVT+RDRYEFYSIMEIMRFGDRS 
Sbjct: 61  NPMTNEFLELPDREYDESSPYYGFGFNPKTKQYKLFRVTERDRYEFYSIMEIMRFGDRSE 120

Query: 121 TKEEWRHFKCPPINFDDHGAYLNGVIYWMGKEKGKAYVIYALDVETEQMELVADLEVGPH 180
           TKEEWRHFKCPPI+FDDHGAYLNGVIYWMGKEKGKAYVIYALDVETEQMELVADLEVGPH
Sbjct: 121 TKEEWRHFKCPPISFDDHGAYLNGVIYWMGKEKGKAYVIYALDVETEQMELVADLEVGPH 180

Query: 181 NFRYNGYIATLNKSVYAYVPIVGPCCTKIQVWTMQEKKSWIREFVMHDEVSRALRMPMQL 240
           NFRYNGYIATLNKSVYAYVPIVGPCCTKIQ+WTMQ K+ WIREFVM+DEVSR LRMPMQ+
Sbjct: 181 NFRYNGYIATLNKSVYAYVPIVGPCCTKIQIWTMQGKEGWIREFVMYDEVSRGLRMPMQM 240

Query: 241 VKVLKDGERWFFVEGNILCCDKTGMNIKTESLWNRKIETRFDGLCQIESLNFGSIQNILA 300
           VKVLKDGERWFFVEGNILCCDKTGMNIK ESLWN KIETRFDGLCQIESLNFGSIQNILA
Sbjct: 241 VKVLKDGERWFFVEGNILCCDKTGMNIKIESLWNSKIETRFDGLCQIESLNFGSIQNILA 300

Query: 301 GYQ 304
           GYQ
Sbjct: 301 GYQ 303

BLAST of Chy9G158770 vs. ExPASy TrEMBL
Match: A0A0A0KSJ2 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G643290 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66
Identity = 143/311 (45.98%), Postives = 197/311 (63.34%), Query Frame = 0

Query: 2   TRECNFKIHCIDID-TMSCVGSFGFEDDHNHSTVSIISSCHALLLISKLIDTDDLCEGIL 61
           T +CN K++CIDI+ T + + SF F+++     + I++SC+ LL I K+ D ++ C GIL
Sbjct: 83  TFKCNPKMYCIDINRTNNLIASFVFDNNDWPYKIKILNSCNGLLYIHKVGD-ENFCNGIL 142

Query: 62  NPMTNEFFEL---PEREYDESSPYYGFGFNPKTKEYKLFRVTKRDRYEFYSIMEIMRFGD 121
           NPMTNEFF L   P+ + ++ S +YGFGFN KTK+YKLF+    D  + + +ME+MRFG 
Sbjct: 143 NPMTNEFFILSTQPKVKNEDISCFYGFGFNLKTKQYKLFKAI-HDEEDSHLMMEVMRFGK 202

Query: 122 RSGTKEEWRHFKCPPINFDDHGAYLNGVIYWMGKEKGKAYVIYALDVETEQMELVADLEV 181
              TK EWRH  C P  F   G YLNGVIYW+G++K    VIY+L+VETE++E +  L+V
Sbjct: 203 NEETK-EWRHLTCLPFVFYCDGVYLNGVIYWIGRQKENKSVIYSLNVETEKIESITVLKV 262

Query: 182 GP--HNFRYNGYIATLNKSVYAYVPIVGPCCTKIQVWTMQEKKSWIREFVMHDEVSRALR 241
            P  +   Y  YI   N ++YA + I G CC K+Q+W MQ K  W++EFV+HD   R + 
Sbjct: 263 DPSYNTSDYGYYIGKYNGNLYATIWIHGTCCKKVQLWMMQGKDCWVKEFVVHDIEDRYVD 322

Query: 242 MPMQLVKVLKDGERWFFVEGN-ILCCDKTGMNIKTESLWNRKIETR---FDGLCQIESLN 301
             + LVK+ +DGERWF+V    ILC DKTG  IK +    R    R      LC  +SLN
Sbjct: 323 AFLVLVKIFEDGERWFYVGSRLILCYDKTGTQIKKKCRMKRVSNGRGNLVGQLCHFDSLN 382

Query: 302 FGSIQNILAGY 303
           FGS+ NIL G+
Sbjct: 383 FGSLPNILDGH 390

BLAST of Chy9G158770 vs. ExPASy TrEMBL
Match: A0A5A7T7C6 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001850 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.1e-56
Identity = 138/306 (45.10%), Postives = 182/306 (59.48%), Query Frame = 0

Query: 5   CNFKIHCIDIDT-MSCVGSFGFEDDHNHSTVSIISSCHALLLISKLIDTDDLCEGILNPM 64
           CN KIHC+DID+  S V SFGFE D ++  ++I++SC+ LL I K    D LCEGILNPM
Sbjct: 17  CNPKIHCVDIDSKTSYVASFGFEGDWSY--ITIVNSCNGLLYICK-FTFDSLCEGILNPM 76

Query: 65  TNEFFELPEREYDESSPYYGFGFNPKTKEYKLFRV---TKRDRYEFYSIMEIMRFGDRSG 124
           TNEF E+P+ E +      GFGF+P+TK+YKLFR       +  + + IMEI  F   +G
Sbjct: 77  TNEFMEIPQPEIELDVHSIGFGFSPRTKQYKLFRTEPEVLENLKKCHYIMEIFTFD--NG 136

Query: 125 TKEEWRHFKCPPINFDDHGAYLNGVIYWMGK--EKGKAYVIYALDVETEQMELVADLEVG 184
            K +WRHF+  P     HG YLNGVIYW+GK  EK    VIYALDV+TEQME +A LE+G
Sbjct: 137 YK-QWRHFERLPFVVFHHGQYLNGVIYWIGKKLEKEGEAVIYALDVDTEQMECIATLEIG 196

Query: 185 PHNFRYNGYIATLNKSVYAYVPI----VGPCCTKIQVWTMQEKKSWIREFVMHDEVSRAL 244
           P  F  NG I    + VYA + +    V P   KI++W MQ K SWI+EF + +E     
Sbjct: 197 P--FLKNGSIKIFEERVYAIISLMDKRVSPTSYKIELWRMQTKDSWIKEFSIDEE----- 256

Query: 245 RMPMQLVKVLKDGERWFFVEGNILCCDKTGMNIKTESLWNRKIETRFDGLCQIESLNFGS 301
                L+ V +DGE    ++ NI   DK+   IK ++L   +   +  G   I S+NF  
Sbjct: 257 --SFGLITVFEDGELLIAIKDNIFRLDKSRKKIKIKTLNRSESRIKVIGCNTINSINFEC 307

BLAST of Chy9G158770 vs. ExPASy TrEMBL
Match: A0A1S3CB99 (F-box protein At3g07870-like OS=Cucumis melo OX=3656 GN=LOC103498749 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 1.2e-55
Identity = 137/306 (44.77%), Postives = 181/306 (59.15%), Query Frame = 0

Query: 5   CNFKIHCIDIDT-MSCVGSFGFEDDHNHSTVSIISSCHALLLISKLIDTDDLCEGILNPM 64
           CN KIHC+DID+  S V SFGFE D ++  ++I++SC+ LL I K    D LCEGILNPM
Sbjct: 84  CNPKIHCVDIDSKTSYVASFGFEGDWSY--ITIVNSCNGLLYICK-FTFDSLCEGILNPM 143

Query: 65  TNEFFELPEREYDESSPYYGFGFNPKTKEYKLFRV---TKRDRYEFYSIMEIMRFGDRSG 124
           TNEF E+P+ E +      GFGF+P+TK+YKLFR       +  + + IMEI  F   +G
Sbjct: 144 TNEFMEIPQPEIELDVHSIGFGFSPRTKQYKLFRTEPEVLENLKKCHYIMEIFTFD--NG 203

Query: 125 TKEEWRHFKCPPINFDDHGAYLNGVIYWMGK--EKGKAYVIYALDVETEQMELVADLEVG 184
            K +WRHF+  P     HG YLNGVIYW+GK  EK    VIYALDV+TEQME  A LE+G
Sbjct: 204 YK-QWRHFERLPFVVFHHGQYLNGVIYWIGKKLEKEGEAVIYALDVDTEQMECTATLEIG 263

Query: 185 PHNFRYNGYIATLNKSVYAYVPI----VGPCCTKIQVWTMQEKKSWIREFVMHDEVSRAL 244
           P     NG I    + VYA + +    V P   KI++W MQ+K SWI+EF + +E     
Sbjct: 264 PS--LKNGSIKIFEERVYAIISLMDKRVSPTSYKIELWRMQKKDSWIKEFSIDEE----- 323

Query: 245 RMPMQLVKVLKDGERWFFVEGNILCCDKTGMNIKTESLWNRKIETRFDGLCQIESLNFGS 301
                L+ V +DGE    ++ NI   DK+   IK ++L + +   +  G   I S+NF  
Sbjct: 324 --SFGLITVFEDGELLIAIKDNIFRLDKSRKKIKIKTLNSSESRIKVIGCNTINSINFEC 374

BLAST of Chy9G158770 vs. ExPASy TrEMBL
Match: A0A5A7TCP6 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002060 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 3.2e-53
Identity = 100/121 (82.64%), Postives = 111/121 (91.74%), Query Frame = 0

Query: 63  MTNEFFELPEREYDESSPYYGFGFNPKTKEYKLFRVTKRDRYEFYSIMEIMRFGDRSGTK 122
           MTNEFFELPE E+DES P+YGFGF+ KTK+YKLFRVT  DRYE Y IMEIMRFGDRSGTK
Sbjct: 1   MTNEFFELPECEFDESHPFYGFGFSLKTKQYKLFRVTYDDRYELYCIMEIMRFGDRSGTK 60

Query: 123 EEWRHFKCPPINFDDHGAYLNGVIYWMGKEKGKAYVIYALDVETEQMELVADLEVGPHNF 182
           EEWRHFKCPPI+FD+HGAYLNGVIYW+GKE+GK +VIYALDVETEQ+E VA LEVGPH+F
Sbjct: 61  EEWRHFKCPPISFDNHGAYLNGVIYWVGKEEGKEHVIYALDVETEQIESVAVLEVGPHSF 120

Query: 183 R 184
           R
Sbjct: 121 R 121

BLAST of Chy9G158770 vs. NCBI nr
Match: XP_004141601.1 (F-box protein At3g07870 [Cucumis sativus] >KGN52549.1 hypothetical protein Csa_008830 [Cucumis sativus])

HSP 1 Score: 620 bits (1600), Expect = 2.37e-224
Identity = 287/303 (94.72%), Postives = 296/303 (97.69%), Query Frame = 0

Query: 1   MTRECNFKIHCIDIDTMSCVGSFGFEDDHNHSTVSIISSCHALLLISKLIDTDDLCEGIL 60
           MTRECNFKIHCIDIDTMSCVGSFGFEDDHNHSTVSI+SSCHALLLISKLIDTDDLCEGIL
Sbjct: 1   MTRECNFKIHCIDIDTMSCVGSFGFEDDHNHSTVSIVSSCHALLLISKLIDTDDLCEGIL 60

Query: 61  NPMTNEFFELPEREYDESSPYYGFGFNPKTKEYKLFRVTKRDRYEFYSIMEIMRFGDRSG 120
           NPMTNEF ELP+REYDESSPYYGFGFNPKTK+YKLFRVT+RDRYEFYSIMEIMRFGDRS 
Sbjct: 61  NPMTNEFLELPDREYDESSPYYGFGFNPKTKQYKLFRVTERDRYEFYSIMEIMRFGDRSE 120

Query: 121 TKEEWRHFKCPPINFDDHGAYLNGVIYWMGKEKGKAYVIYALDVETEQMELVADLEVGPH 180
           TKEEWRHFKCPPI+FDDHGAYLNGVIYWMGKEKGKAYVIYALDVETEQMELVADLEVGPH
Sbjct: 121 TKEEWRHFKCPPISFDDHGAYLNGVIYWMGKEKGKAYVIYALDVETEQMELVADLEVGPH 180

Query: 181 NFRYNGYIATLNKSVYAYVPIVGPCCTKIQVWTMQEKKSWIREFVMHDEVSRALRMPMQL 240
           NFRYNGYIATLNKSVYAYVPIVGPCCTKIQ+WTMQ K+ WIREFVM+DEVSR LRMPMQ+
Sbjct: 181 NFRYNGYIATLNKSVYAYVPIVGPCCTKIQIWTMQGKEGWIREFVMYDEVSRGLRMPMQM 240

Query: 241 VKVLKDGERWFFVEGNILCCDKTGMNIKTESLWNRKIETRFDGLCQIESLNFGSIQNILA 300
           VKVLKDGERWFFVEGNILCCDKTGMNIK ESLWN KIETRFDGLCQIESLNFGSIQNILA
Sbjct: 241 VKVLKDGERWFFVEGNILCCDKTGMNIKIESLWNSKIETRFDGLCQIESLNFGSIQNILA 300

Query: 301 GYQ 303
           GYQ
Sbjct: 301 GYQ 303

BLAST of Chy9G158770 vs. NCBI nr
Match: XP_004141602.1 (F-box protein At3g07870 [Cucumis sativus])

HSP 1 Score: 263 bits (672), Expect = 5.10e-82
Identity = 143/311 (45.98%), Postives = 198/311 (63.67%), Query Frame = 0

Query: 2   TRECNFKIHCIDID-TMSCVGSFGFEDDHNHSTVSIISSCHALLLISKLIDTDDLCEGIL 61
           T +CN K++CIDI+ T + + SF F+++     + I++SC+ LL I K+ D ++ C GIL
Sbjct: 83  TFKCNPKMYCIDINRTNNLIASFVFDNNDWPYKIKILNSCNGLLYIHKVGD-ENFCNGIL 142

Query: 62  NPMTNEFFEL---PEREYDESSPYYGFGFNPKTKEYKLFRVTKRDRYEFYSIMEIMRFGD 121
           NPMTNEFF L   P+ + ++ S +YGFGFN KTK+YKLF+    D  + + +ME+MRFG 
Sbjct: 143 NPMTNEFFILSTQPKVKNEDISCFYGFGFNLKTKQYKLFKAI-HDEEDSHLMMEVMRFGK 202

Query: 122 RSGTKEEWRHFKCPPINFDDHGAYLNGVIYWMGKEKGKAYVIYALDVETEQMELVADLEV 181
              TKE WRH  C P  F   G YLNGVIYW+G++K    VIY+L+VETE++E +  L+V
Sbjct: 203 NEETKE-WRHLTCLPFVFYCDGVYLNGVIYWIGRQKENKSVIYSLNVETEKIESITVLKV 262

Query: 182 GP--HNFRYNGYIATLNKSVYAYVPIVGPCCTKIQVWTMQEKKSWIREFVMHDEVSRALR 241
            P  +   Y  YI   N ++YA + I G CC K+Q+W MQ K  W++EFV+HD   R + 
Sbjct: 263 DPSYNTSDYGYYIGKYNGNLYATIWIHGTCCKKVQLWMMQGKDCWVKEFVVHDIEDRYVD 322

Query: 242 MPMQLVKVLKDGERWFFVEGN-ILCCDKTGMNIKTESLWNRKIETRFD---GLCQIESLN 301
             + LVK+ +DGERWF+V    ILC DKTG  IK +    R    R +    LC  +SLN
Sbjct: 323 AFLVLVKIFEDGERWFYVGSRLILCYDKTGTQIKKKCRMKRVSNGRGNLVGQLCHFDSLN 382

BLAST of Chy9G158770 vs. NCBI nr
Match: KAE8648955.1 (hypothetical protein Csa_007901 [Cucumis sativus])

HSP 1 Score: 255 bits (651), Expect = 4.93e-80
Identity = 139/304 (45.72%), Postives = 193/304 (63.49%), Query Frame = 0

Query: 9   IHCIDID-TMSCVGSFGFEDDHNHSTVSIISSCHALLLISKLIDTDDLCEGILNPMTNEF 68
           ++CIDI+ T + + SF F+++     + I++SC+ LL I K+ D ++ C GILNPMTNEF
Sbjct: 1   MYCIDINRTNNLIASFVFDNNDWPYKIKILNSCNGLLYIHKVGD-ENFCNGILNPMTNEF 60

Query: 69  FEL---PEREYDESSPYYGFGFNPKTKEYKLFRVTKRDRYEFYSIMEIMRFGDRSGTKEE 128
           F L   P+ + ++ S +YGFGFN KTK+YKLF+    D  + + +ME+MRFG    TKE 
Sbjct: 61  FILSTQPKVKNEDISCFYGFGFNLKTKQYKLFKAI-HDEEDSHLMMEVMRFGKNEETKE- 120

Query: 129 WRHFKCPPINFDDHGAYLNGVIYWMGKEKGKAYVIYALDVETEQMELVADLEVGP--HNF 188
           WRH  C P  F   G YLNGVIYW+G++K    VIY+L+VETE++E +  L+V P  +  
Sbjct: 121 WRHLTCLPFVFYCDGVYLNGVIYWIGRQKENKSVIYSLNVETEKIESITVLKVDPSYNTS 180

Query: 189 RYNGYIATLNKSVYAYVPIVGPCCTKIQVWTMQEKKSWIREFVMHDEVSRALRMPMQLVK 248
            Y  YI   N ++YA + I G CC K+Q+W MQ K  W++EFV+HD   R +   + LVK
Sbjct: 181 DYGYYIGKYNGNLYATIWIHGTCCKKVQLWMMQGKDCWVKEFVVHDIEDRYVDAFLVLVK 240

Query: 249 VLKDGERWFFVEGN-ILCCDKTGMNIKTESLWNRKIETRFD---GLCQIESLNFGSIQNI 302
           + +DGERWF+V    ILC DKTG  IK +    R    R +    LC  +SLNFGS+ NI
Sbjct: 241 IFEDGERWFYVGSRLILCYDKTGTQIKKKCRMKRVSNGRGNLVGQLCHFDSLNFGSLPNI 300

BLAST of Chy9G158770 vs. NCBI nr
Match: KAA0039382.1 (F-box protein [Cucumis melo var. makuwa] >TYK00570.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 230 bits (587), Expect = 2.49e-70
Identity = 139/309 (44.98%), Postives = 183/309 (59.22%), Query Frame = 0

Query: 2   TRECNFKIHCIDIDTM-SCVGSFGFEDDHNHSTVSIISSCHALLLISKLIDTDDLCEGIL 61
           T  CN KIHC+DID+  S V SFGFE D ++  ++I++SC+ LL I K    D LCEGIL
Sbjct: 14  TPWCNPKIHCVDIDSKTSYVASFGFEGDWSY--ITIVNSCNGLLYICKF-TFDSLCEGIL 73

Query: 62  NPMTNEFFELPEREYDESSPYYGFGFNPKTKEYKLFRVTKR---DRYEFYSIMEIMRFGD 121
           NPMTNEF E+P+ E +      GFGF+P+TK+YKLFR       +  + + IMEI  F +
Sbjct: 74  NPMTNEFMEIPQPEIELDVHSIGFGFSPRTKQYKLFRTEPEVLENLKKCHYIMEIFTFDN 133

Query: 122 RSGTKEEWRHFKCPPINFDDHGAYLNGVIYWMGK--EKGKAYVIYALDVETEQMELVADL 181
             G K+ WRHF+  P     HG YLNGVIYW+GK  EK    VIYALDV+TEQME +A L
Sbjct: 134 --GYKQ-WRHFERLPFVVFHHGQYLNGVIYWIGKKLEKEGEAVIYALDVDTEQMECIATL 193

Query: 182 EVGPHNFRYNGYIATLNKSVYAYVPI----VGPCCTKIQVWTMQEKKSWIREFVMHDEVS 241
           E+GP  F  NG I    + VYA + +    V P   KI++W MQ K SWI+EF + +E  
Sbjct: 194 EIGP--FLKNGSIKIFEERVYAIISLMDKRVSPTSYKIELWRMQTKDSWIKEFSIDEE-- 253

Query: 242 RALRMPMQLVKVLKDGERWFFVEGNILCCDKTGMNIKTESLWNRKIETRFDGLCQIESLN 300
                   L+ V +DGE    ++ NI   DK+   IK ++L   +   +  G   I S+N
Sbjct: 254 -----SFGLITVFEDGELLIAIKDNIFRLDKSRKKIKIKTLNRSESRIKVIGCNTINSIN 307

BLAST of Chy9G158770 vs. NCBI nr
Match: KAA0039401.1 (F-box protein [Cucumis melo var. makuwa] >TYK00589.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 219 bits (558), Expect = 1.95e-68
Identity = 100/121 (82.64%), Postives = 111/121 (91.74%), Query Frame = 0

Query: 63  MTNEFFELPEREYDESSPYYGFGFNPKTKEYKLFRVTKRDRYEFYSIMEIMRFGDRSGTK 122
           MTNEFFELPE E+DES P+YGFGF+ KTK+YKLFRVT  DRYE Y IMEIMRFGDRSGTK
Sbjct: 1   MTNEFFELPECEFDESHPFYGFGFSLKTKQYKLFRVTYDDRYELYCIMEIMRFGDRSGTK 60

Query: 123 EEWRHFKCPPINFDDHGAYLNGVIYWMGKEKGKAYVIYALDVETEQMELVADLEVGPHNF 182
           EEWRHFKCPPI+FD+HGAYLNGVIYW+GKE+GK +VIYALDVETEQ+E VA LEVGPH+F
Sbjct: 61  EEWRHFKCPPISFDNHGAYLNGVIYWVGKEEGKEHVIYALDVETEQIESVAVLEVGPHSF 120

BLAST of Chy9G158770 vs. TAIR 10
Match: AT1G53550.1 (F-box family protein )

HSP 1 Score: 66.2 bits (160), Expect = 5.1e-11
Identity = 49/196 (25.00%), Postives = 94/196 (47.96%), Query Frame = 0

Query: 44  LLISKLIDTDDLCEGILNPMTNEFFELPEREYDESSP-------YYGFGFNPKTKEYKLF 103
           L+ S+ I+ + L   I NP T E+  LP++  +E +         Y FG++P  K++K+ 
Sbjct: 134 LICSQHIEENYLFALISNPTTGEYIALPKQRMEEMNSETIIEKVRYSFGYDPIDKQFKVL 193

Query: 104 RVT--KRDRYEFYSIMEIMRFGDRSGTKEEWRHFKCPPINF--DDHGAYLNGVIYWMGKE 163
           R+T   R  +E+ S  +++  G  +     WR+ +C  +++  +D G  +NGV+Y+  + 
Sbjct: 194 RITWLHRGSHEWSSEYQVLTLGFGN---ISWRNTQCCVVHYLLEDSGICINGVLYYPARL 253

Query: 164 KGKAYVIYALDVETEQMELVA---DLEVGPHNFRYNGYIATLNKSVYAYVPIVGPCC--- 221
             + Y I   DV TE+    +   D+ +          +  L+ S+  Y   +G C    
Sbjct: 254 DNRKYTIVCFDVMTEKFSFTSIDKDMTI----------MTNLSFSLIDYKGKLGACICDH 313

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LPH07.1e-1025.00Putative F-box protein At1g53550 OS=Arabidopsis thaliana OX=3702 GN=At1g53550 PE... [more]
Q9LM892.8e-0623.83Putative F-box protein At1g20657 OS=Arabidopsis thaliana OX=3702 GN=At1g20657 PE... [more]
Match NameE-valueIdentityDescription
A0A0A0KUJ12.1e-17494.72FBA_3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G643280 PE=4 ... [more]
A0A0A0KSJ21.1e-6645.98F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G643290 PE=4 ... [more]
A0A5A7T7C61.1e-5645.10F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001850... [more]
A0A1S3CB991.2e-5544.77F-box protein At3g07870-like OS=Cucumis melo OX=3656 GN=LOC103498749 PE=4 SV=1[more]
A0A5A7TCP63.2e-5382.64F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002060... [more]
Match NameE-valueIdentityDescription
XP_004141601.12.37e-22494.72F-box protein At3g07870 [Cucumis sativus] >KGN52549.1 hypothetical protein Csa_0... [more]
XP_004141602.15.10e-8245.98F-box protein At3g07870 [Cucumis sativus][more]
KAE8648955.14.93e-8045.72hypothetical protein Csa_007901 [Cucumis sativus][more]
KAA0039382.12.49e-7044.98F-box protein [Cucumis melo var. makuwa] >TYK00570.1 F-box protein [Cucumis melo... [more]
KAA0039401.11.95e-6882.64F-box protein [Cucumis melo var. makuwa] >TYK00589.1 F-box protein [Cucumis melo... [more]
Match NameE-valueIdentityDescription
AT1G53550.15.1e-1125.00F-box family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013187F-box associated domain, type 3PFAMPF08268FBA_3coord: 140..252
e-value: 9.1E-7
score: 28.9
IPR017451F-box associated interaction domainTIGRFAMTIGR01640TIGR01640coord: 39..248
e-value: 4.0E-20
score: 70.1
NoneNo IPR availablePANTHERPTHR31790OS02G0783600 PROTEINcoord: 16..267
NoneNo IPR availablePANTHERPTHR31790:SF414F-BOX AND ASSOCIATED INTERACTION DOMAINS-CONTAINING-LIKE PROTEINcoord: 16..267

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy9G158770.1Chy9G158770.1mRNA