Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTCGTGAATGCAATTTCAAGATTCACTGTATCGATATTGATACAATGAGTTGTGTTGGCTCATTTGGATTTGAAGATGATCACAATCACTCGACTGTCTCAATTATCAGCTCTTGCCATGCTCTACTACTCATTTCCAAACTTATTGATACTGATGATTTATGTGAGGGCATATTAAATCCGATGACTAATGAGTTTTTTGAACTTCCTGAACGTGAATATGATGAGTCTAGTCCCTATTATGGATTTGGTTTCAACCCGAAGACAAAGGAGTACAAATTGTTCAGAGTTACCAAAAGGGATAGATATGAATTCTATAGTATAATGGAGATCATGAGGTTTGGTGATAGGAGTGGAACCAAGGAAGAATGGAGGCATTTTAAATGTCCACCAATTAACTTTGACGATCATGGTGCTTACTTGAATGGAGTTATCTATTGGATGGGAAAAGAAAAGGGAAAAGCGTATGTGATTTATGCTCTTGACGTTGAAACCGAACAAATGGAATTAGTTGCTGATTTAGAAGTTGGACCTCACAACTTCAGGTATAATGGGTACATAGCGACGTTAAATAAGAGTGTTTATGCATATGTTCCCATCGTTGGACCATGTTGTACTAAGATTCAAGTTTGGACGATGCAAGAAAAAAAATCGTGGATTAGAGAATTTGTTATGCATGATGAAGTATCAAGGGCTTTGAGGATGCCAATGCAATTGGTTAAAGTGTTGAAAGATGGAGAGAGATGGTTTTTTGTTGAAGGTAACATTCTTTGCTGTGATAAGACAGGGATGAACATCAAGACAGAATCATTATGGAATAGGAAAATTGAAACAAGATTTGATGGATTATGTCAAATAGAATCCTTGAATTTTGGATCTATTCAAAATATATTGGCAGGCTACCAATGA
mRNA sequence
ATGACTCGTGAATGCAATTTCAAGATTCACTGTATCGATATTGATACAATGAGTTGTGTTGGCTCATTTGGATTTGAAGATGATCACAATCACTCGACTGTCTCAATTATCAGCTCTTGCCATGCTCTACTACTCATTTCCAAACTTATTGATACTGATGATTTATGTGAGGGCATATTAAATCCGATGACTAATGAGTTTTTTGAACTTCCTGAACGTGAATATGATGAGTCTAGTCCCTATTATGGATTTGGTTTCAACCCGAAGACAAAGGAGTACAAATTGTTCAGAGTTACCAAAAGGGATAGATATGAATTCTATAGTATAATGGAGATCATGAGGTTTGGTGATAGGAGTGGAACCAAGGAAGAATGGAGGCATTTTAAATGTCCACCAATTAACTTTGACGATCATGGTGCTTACTTGAATGGAGTTATCTATTGGATGGGAAAAGAAAAGGGAAAAGCGTATGTGATTTATGCTCTTGACGTTGAAACCGAACAAATGGAATTAGTTGCTGATTTAGAAGTTGGACCTCACAACTTCAGGTATAATGGGTACATAGCGACGTTAAATAAGAGTGTTTATGCATATGTTCCCATCGTTGGACCATGTTGTACTAAGATTCAAGTTTGGACGATGCAAGAAAAAAAATCGTGGATTAGAGAATTTGTTATGCATGATGAAGTATCAAGGGCTTTGAGGATGCCAATGCAATTGGTTAAAGTGTTGAAAGATGGAGAGAGATGGTTTTTTGTTGAAGGTAACATTCTTTGCTGTGATAAGACAGGGATGAACATCAAGACAGAATCATTATGGAATAGGAAAATTGAAACAAGATTTGATGGATTATGTCAAATAGAATCCTTGAATTTTGGATCTATTCAAAATATATTGGCAGGCTACCAATGA
Coding sequence (CDS)
ATGACTCGTGAATGCAATTTCAAGATTCACTGTATCGATATTGATACAATGAGTTGTGTTGGCTCATTTGGATTTGAAGATGATCACAATCACTCGACTGTCTCAATTATCAGCTCTTGCCATGCTCTACTACTCATTTCCAAACTTATTGATACTGATGATTTATGTGAGGGCATATTAAATCCGATGACTAATGAGTTTTTTGAACTTCCTGAACGTGAATATGATGAGTCTAGTCCCTATTATGGATTTGGTTTCAACCCGAAGACAAAGGAGTACAAATTGTTCAGAGTTACCAAAAGGGATAGATATGAATTCTATAGTATAATGGAGATCATGAGGTTTGGTGATAGGAGTGGAACCAAGGAAGAATGGAGGCATTTTAAATGTCCACCAATTAACTTTGACGATCATGGTGCTTACTTGAATGGAGTTATCTATTGGATGGGAAAAGAAAAGGGAAAAGCGTATGTGATTTATGCTCTTGACGTTGAAACCGAACAAATGGAATTAGTTGCTGATTTAGAAGTTGGACCTCACAACTTCAGGTATAATGGGTACATAGCGACGTTAAATAAGAGTGTTTATGCATATGTTCCCATCGTTGGACCATGTTGTACTAAGATTCAAGTTTGGACGATGCAAGAAAAAAAATCGTGGATTAGAGAATTTGTTATGCATGATGAAGTATCAAGGGCTTTGAGGATGCCAATGCAATTGGTTAAAGTGTTGAAAGATGGAGAGAGATGGTTTTTTGTTGAAGGTAACATTCTTTGCTGTGATAAGACAGGGATGAACATCAAGACAGAATCATTATGGAATAGGAAAATTGAAACAAGATTTGATGGATTATGTCAAATAGAATCCTTGAATTTTGGATCTATTCAAAATATATTGGCAGGCTACCAATGA
Protein sequence
MTRECNFKIHCIDIDTMSCVGSFGFEDDHNHSTVSIISSCHALLLISKLIDTDDLCEGILNPMTNEFFELPEREYDESSPYYGFGFNPKTKEYKLFRVTKRDRYEFYSIMEIMRFGDRSGTKEEWRHFKCPPINFDDHGAYLNGVIYWMGKEKGKAYVIYALDVETEQMELVADLEVGPHNFRYNGYIATLNKSVYAYVPIVGPCCTKIQVWTMQEKKSWIREFVMHDEVSRALRMPMQLVKVLKDGERWFFVEGNILCCDKTGMNIKTESLWNRKIETRFDGLCQIESLNFGSIQNILAGYQ*
Homology
BLAST of Chy9G158770 vs. ExPASy Swiss-Prot
Match:
Q9LPH0 (Putative F-box protein At1g53550 OS=Arabidopsis thaliana OX=3702 GN=At1g53550 PE=4 SV=2)
HSP 1 Score: 66.2 bits (160), Expect = 7.1e-10
Identity = 49/196 (25.00%), Postives = 94/196 (47.96%), Query Frame = 0
Query: 44 LLISKLIDTDDLCEGILNPMTNEFFELPEREYDESSP-------YYGFGFNPKTKEYKLF 103
L+ S+ I+ + L I NP T E+ LP++ +E + Y FG++P K++K+
Sbjct: 134 LICSQHIEENYLFALISNPTTGEYIALPKQRMEEMNSETIIEKVRYSFGYDPIDKQFKVL 193
Query: 104 RVT--KRDRYEFYSIMEIMRFGDRSGTKEEWRHFKCPPINF--DDHGAYLNGVIYWMGKE 163
R+T R +E+ S +++ G + WR+ +C +++ +D G +NGV+Y+ +
Sbjct: 194 RITWLHRGSHEWSSEYQVLTLGFGN---ISWRNTQCCVVHYLLEDSGICINGVLYYPARL 253
Query: 164 KGKAYVIYALDVETEQMELVA---DLEVGPHNFRYNGYIATLNKSVYAYVPIVGPCC--- 221
+ Y I DV TE+ + D+ + + L+ S+ Y +G C
Sbjct: 254 DNRKYTIVCFDVMTEKFSFTSIDKDMTI----------MTNLSFSLIDYKGKLGACICDH 313
BLAST of Chy9G158770 vs. ExPASy Swiss-Prot
Match:
Q9LM89 (Putative F-box protein At1g20657 OS=Arabidopsis thaliana OX=3702 GN=At1g20657 PE=4 SV=1)
HSP 1 Score: 54.3 bits (129), Expect = 2.8e-06
Identity = 46/193 (23.83%), Postives = 84/193 (43.52%), Query Frame = 0
Query: 59 ILNPMTNEFFELPEREYDESSPYYGFGFNPKTKEYKLFRVTKRDRYEFYSIMEIMRFGDR 118
I NP T E + LP + + + FG++P KE+K+ +TK ++ + +++ FG
Sbjct: 151 ICNPSTGESWPLPRVKTNRTIITSYFGYDPINKEFKVLCMTK-SKFGVFGEHQVLTFG-- 210
Query: 119 SGTKEEWRHFKCPPINFDD--------------HGAYLNGVIYWMGK---EKGKAYVIYA 178
+G + WR KC ++ D G +NGV+Y++G+ + I
Sbjct: 211 TGKELSWRKIKCDMAHYPDVVDYEASGYPRPLYDGICINGVLYYLGRVHDDLDGFPDIVC 270
Query: 179 LDVETEQMELV---------ADLEVGPHNFRYNGYIATLNKSVYAYVPIVGPCC---TKI 221
D++ E+ + + + + P + G IA L + +GP T I
Sbjct: 271 FDIKFEKFSYIKKANGMKRNSGVNLQPTLVNHKGKIAKLQAN-------IGPGSIRYTGI 330
BLAST of Chy9G158770 vs. ExPASy TrEMBL
Match:
A0A0A0KUJ1 (FBA_3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G643280 PE=4 SV=1)
HSP 1 Score: 621.3 bits (1601), Expect = 2.1e-174
Identity = 287/303 (94.72%), Postives = 296/303 (97.69%), Query Frame = 0
Query: 1 MTRECNFKIHCIDIDTMSCVGSFGFEDDHNHSTVSIISSCHALLLISKLIDTDDLCEGIL 60
MTRECNFKIHCIDIDTMSCVGSFGFEDDHNHSTVSI+SSCHALLLISKLIDTDDLCEGIL
Sbjct: 1 MTRECNFKIHCIDIDTMSCVGSFGFEDDHNHSTVSIVSSCHALLLISKLIDTDDLCEGIL 60
Query: 61 NPMTNEFFELPEREYDESSPYYGFGFNPKTKEYKLFRVTKRDRYEFYSIMEIMRFGDRSG 120
NPMTNEF ELP+REYDESSPYYGFGFNPKTK+YKLFRVT+RDRYEFYSIMEIMRFGDRS
Sbjct: 61 NPMTNEFLELPDREYDESSPYYGFGFNPKTKQYKLFRVTERDRYEFYSIMEIMRFGDRSE 120
Query: 121 TKEEWRHFKCPPINFDDHGAYLNGVIYWMGKEKGKAYVIYALDVETEQMELVADLEVGPH 180
TKEEWRHFKCPPI+FDDHGAYLNGVIYWMGKEKGKAYVIYALDVETEQMELVADLEVGPH
Sbjct: 121 TKEEWRHFKCPPISFDDHGAYLNGVIYWMGKEKGKAYVIYALDVETEQMELVADLEVGPH 180
Query: 181 NFRYNGYIATLNKSVYAYVPIVGPCCTKIQVWTMQEKKSWIREFVMHDEVSRALRMPMQL 240
NFRYNGYIATLNKSVYAYVPIVGPCCTKIQ+WTMQ K+ WIREFVM+DEVSR LRMPMQ+
Sbjct: 181 NFRYNGYIATLNKSVYAYVPIVGPCCTKIQIWTMQGKEGWIREFVMYDEVSRGLRMPMQM 240
Query: 241 VKVLKDGERWFFVEGNILCCDKTGMNIKTESLWNRKIETRFDGLCQIESLNFGSIQNILA 300
VKVLKDGERWFFVEGNILCCDKTGMNIK ESLWN KIETRFDGLCQIESLNFGSIQNILA
Sbjct: 241 VKVLKDGERWFFVEGNILCCDKTGMNIKIESLWNSKIETRFDGLCQIESLNFGSIQNILA 300
Query: 301 GYQ 304
GYQ
Sbjct: 301 GYQ 303
BLAST of Chy9G158770 vs. ExPASy TrEMBL
Match:
A0A0A0KSJ2 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G643290 PE=4 SV=1)
HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66
Identity = 143/311 (45.98%), Postives = 197/311 (63.34%), Query Frame = 0
Query: 2 TRECNFKIHCIDID-TMSCVGSFGFEDDHNHSTVSIISSCHALLLISKLIDTDDLCEGIL 61
T +CN K++CIDI+ T + + SF F+++ + I++SC+ LL I K+ D ++ C GIL
Sbjct: 83 TFKCNPKMYCIDINRTNNLIASFVFDNNDWPYKIKILNSCNGLLYIHKVGD-ENFCNGIL 142
Query: 62 NPMTNEFFEL---PEREYDESSPYYGFGFNPKTKEYKLFRVTKRDRYEFYSIMEIMRFGD 121
NPMTNEFF L P+ + ++ S +YGFGFN KTK+YKLF+ D + + +ME+MRFG
Sbjct: 143 NPMTNEFFILSTQPKVKNEDISCFYGFGFNLKTKQYKLFKAI-HDEEDSHLMMEVMRFGK 202
Query: 122 RSGTKEEWRHFKCPPINFDDHGAYLNGVIYWMGKEKGKAYVIYALDVETEQMELVADLEV 181
TK EWRH C P F G YLNGVIYW+G++K VIY+L+VETE++E + L+V
Sbjct: 203 NEETK-EWRHLTCLPFVFYCDGVYLNGVIYWIGRQKENKSVIYSLNVETEKIESITVLKV 262
Query: 182 GP--HNFRYNGYIATLNKSVYAYVPIVGPCCTKIQVWTMQEKKSWIREFVMHDEVSRALR 241
P + Y YI N ++YA + I G CC K+Q+W MQ K W++EFV+HD R +
Sbjct: 263 DPSYNTSDYGYYIGKYNGNLYATIWIHGTCCKKVQLWMMQGKDCWVKEFVVHDIEDRYVD 322
Query: 242 MPMQLVKVLKDGERWFFVEGN-ILCCDKTGMNIKTESLWNRKIETR---FDGLCQIESLN 301
+ LVK+ +DGERWF+V ILC DKTG IK + R R LC +SLN
Sbjct: 323 AFLVLVKIFEDGERWFYVGSRLILCYDKTGTQIKKKCRMKRVSNGRGNLVGQLCHFDSLN 382
Query: 302 FGSIQNILAGY 303
FGS+ NIL G+
Sbjct: 383 FGSLPNILDGH 390
BLAST of Chy9G158770 vs. ExPASy TrEMBL
Match:
A0A5A7T7C6 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001850 PE=4 SV=1)
HSP 1 Score: 230.3 bits (586), Expect = 1.1e-56
Identity = 138/306 (45.10%), Postives = 182/306 (59.48%), Query Frame = 0
Query: 5 CNFKIHCIDIDT-MSCVGSFGFEDDHNHSTVSIISSCHALLLISKLIDTDDLCEGILNPM 64
CN KIHC+DID+ S V SFGFE D ++ ++I++SC+ LL I K D LCEGILNPM
Sbjct: 17 CNPKIHCVDIDSKTSYVASFGFEGDWSY--ITIVNSCNGLLYICK-FTFDSLCEGILNPM 76
Query: 65 TNEFFELPEREYDESSPYYGFGFNPKTKEYKLFRV---TKRDRYEFYSIMEIMRFGDRSG 124
TNEF E+P+ E + GFGF+P+TK+YKLFR + + + IMEI F +G
Sbjct: 77 TNEFMEIPQPEIELDVHSIGFGFSPRTKQYKLFRTEPEVLENLKKCHYIMEIFTFD--NG 136
Query: 125 TKEEWRHFKCPPINFDDHGAYLNGVIYWMGK--EKGKAYVIYALDVETEQMELVADLEVG 184
K +WRHF+ P HG YLNGVIYW+GK EK VIYALDV+TEQME +A LE+G
Sbjct: 137 YK-QWRHFERLPFVVFHHGQYLNGVIYWIGKKLEKEGEAVIYALDVDTEQMECIATLEIG 196
Query: 185 PHNFRYNGYIATLNKSVYAYVPI----VGPCCTKIQVWTMQEKKSWIREFVMHDEVSRAL 244
P F NG I + VYA + + V P KI++W MQ K SWI+EF + +E
Sbjct: 197 P--FLKNGSIKIFEERVYAIISLMDKRVSPTSYKIELWRMQTKDSWIKEFSIDEE----- 256
Query: 245 RMPMQLVKVLKDGERWFFVEGNILCCDKTGMNIKTESLWNRKIETRFDGLCQIESLNFGS 301
L+ V +DGE ++ NI DK+ IK ++L + + G I S+NF
Sbjct: 257 --SFGLITVFEDGELLIAIKDNIFRLDKSRKKIKIKTLNRSESRIKVIGCNTINSINFEC 307
BLAST of Chy9G158770 vs. ExPASy TrEMBL
Match:
A0A1S3CB99 (F-box protein At3g07870-like OS=Cucumis melo OX=3656 GN=LOC103498749 PE=4 SV=1)
HSP 1 Score: 226.9 bits (577), Expect = 1.2e-55
Identity = 137/306 (44.77%), Postives = 181/306 (59.15%), Query Frame = 0
Query: 5 CNFKIHCIDIDT-MSCVGSFGFEDDHNHSTVSIISSCHALLLISKLIDTDDLCEGILNPM 64
CN KIHC+DID+ S V SFGFE D ++ ++I++SC+ LL I K D LCEGILNPM
Sbjct: 84 CNPKIHCVDIDSKTSYVASFGFEGDWSY--ITIVNSCNGLLYICK-FTFDSLCEGILNPM 143
Query: 65 TNEFFELPEREYDESSPYYGFGFNPKTKEYKLFRV---TKRDRYEFYSIMEIMRFGDRSG 124
TNEF E+P+ E + GFGF+P+TK+YKLFR + + + IMEI F +G
Sbjct: 144 TNEFMEIPQPEIELDVHSIGFGFSPRTKQYKLFRTEPEVLENLKKCHYIMEIFTFD--NG 203
Query: 125 TKEEWRHFKCPPINFDDHGAYLNGVIYWMGK--EKGKAYVIYALDVETEQMELVADLEVG 184
K +WRHF+ P HG YLNGVIYW+GK EK VIYALDV+TEQME A LE+G
Sbjct: 204 YK-QWRHFERLPFVVFHHGQYLNGVIYWIGKKLEKEGEAVIYALDVDTEQMECTATLEIG 263
Query: 185 PHNFRYNGYIATLNKSVYAYVPI----VGPCCTKIQVWTMQEKKSWIREFVMHDEVSRAL 244
P NG I + VYA + + V P KI++W MQ+K SWI+EF + +E
Sbjct: 264 PS--LKNGSIKIFEERVYAIISLMDKRVSPTSYKIELWRMQKKDSWIKEFSIDEE----- 323
Query: 245 RMPMQLVKVLKDGERWFFVEGNILCCDKTGMNIKTESLWNRKIETRFDGLCQIESLNFGS 301
L+ V +DGE ++ NI DK+ IK ++L + + + G I S+NF
Sbjct: 324 --SFGLITVFEDGELLIAIKDNIFRLDKSRKKIKIKTLNSSESRIKVIGCNTINSINFEC 374
BLAST of Chy9G158770 vs. ExPASy TrEMBL
Match:
A0A5A7TCP6 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002060 PE=4 SV=1)
HSP 1 Score: 218.8 bits (556), Expect = 3.2e-53
Identity = 100/121 (82.64%), Postives = 111/121 (91.74%), Query Frame = 0
Query: 63 MTNEFFELPEREYDESSPYYGFGFNPKTKEYKLFRVTKRDRYEFYSIMEIMRFGDRSGTK 122
MTNEFFELPE E+DES P+YGFGF+ KTK+YKLFRVT DRYE Y IMEIMRFGDRSGTK
Sbjct: 1 MTNEFFELPECEFDESHPFYGFGFSLKTKQYKLFRVTYDDRYELYCIMEIMRFGDRSGTK 60
Query: 123 EEWRHFKCPPINFDDHGAYLNGVIYWMGKEKGKAYVIYALDVETEQMELVADLEVGPHNF 182
EEWRHFKCPPI+FD+HGAYLNGVIYW+GKE+GK +VIYALDVETEQ+E VA LEVGPH+F
Sbjct: 61 EEWRHFKCPPISFDNHGAYLNGVIYWVGKEEGKEHVIYALDVETEQIESVAVLEVGPHSF 120
Query: 183 R 184
R
Sbjct: 121 R 121
BLAST of Chy9G158770 vs. NCBI nr
Match:
XP_004141601.1 (F-box protein At3g07870 [Cucumis sativus] >KGN52549.1 hypothetical protein Csa_008830 [Cucumis sativus])
HSP 1 Score: 620 bits (1600), Expect = 2.37e-224
Identity = 287/303 (94.72%), Postives = 296/303 (97.69%), Query Frame = 0
Query: 1 MTRECNFKIHCIDIDTMSCVGSFGFEDDHNHSTVSIISSCHALLLISKLIDTDDLCEGIL 60
MTRECNFKIHCIDIDTMSCVGSFGFEDDHNHSTVSI+SSCHALLLISKLIDTDDLCEGIL
Sbjct: 1 MTRECNFKIHCIDIDTMSCVGSFGFEDDHNHSTVSIVSSCHALLLISKLIDTDDLCEGIL 60
Query: 61 NPMTNEFFELPEREYDESSPYYGFGFNPKTKEYKLFRVTKRDRYEFYSIMEIMRFGDRSG 120
NPMTNEF ELP+REYDESSPYYGFGFNPKTK+YKLFRVT+RDRYEFYSIMEIMRFGDRS
Sbjct: 61 NPMTNEFLELPDREYDESSPYYGFGFNPKTKQYKLFRVTERDRYEFYSIMEIMRFGDRSE 120
Query: 121 TKEEWRHFKCPPINFDDHGAYLNGVIYWMGKEKGKAYVIYALDVETEQMELVADLEVGPH 180
TKEEWRHFKCPPI+FDDHGAYLNGVIYWMGKEKGKAYVIYALDVETEQMELVADLEVGPH
Sbjct: 121 TKEEWRHFKCPPISFDDHGAYLNGVIYWMGKEKGKAYVIYALDVETEQMELVADLEVGPH 180
Query: 181 NFRYNGYIATLNKSVYAYVPIVGPCCTKIQVWTMQEKKSWIREFVMHDEVSRALRMPMQL 240
NFRYNGYIATLNKSVYAYVPIVGPCCTKIQ+WTMQ K+ WIREFVM+DEVSR LRMPMQ+
Sbjct: 181 NFRYNGYIATLNKSVYAYVPIVGPCCTKIQIWTMQGKEGWIREFVMYDEVSRGLRMPMQM 240
Query: 241 VKVLKDGERWFFVEGNILCCDKTGMNIKTESLWNRKIETRFDGLCQIESLNFGSIQNILA 300
VKVLKDGERWFFVEGNILCCDKTGMNIK ESLWN KIETRFDGLCQIESLNFGSIQNILA
Sbjct: 241 VKVLKDGERWFFVEGNILCCDKTGMNIKIESLWNSKIETRFDGLCQIESLNFGSIQNILA 300
Query: 301 GYQ 303
GYQ
Sbjct: 301 GYQ 303
BLAST of Chy9G158770 vs. NCBI nr
Match:
XP_004141602.1 (F-box protein At3g07870 [Cucumis sativus])
HSP 1 Score: 263 bits (672), Expect = 5.10e-82
Identity = 143/311 (45.98%), Postives = 198/311 (63.67%), Query Frame = 0
Query: 2 TRECNFKIHCIDID-TMSCVGSFGFEDDHNHSTVSIISSCHALLLISKLIDTDDLCEGIL 61
T +CN K++CIDI+ T + + SF F+++ + I++SC+ LL I K+ D ++ C GIL
Sbjct: 83 TFKCNPKMYCIDINRTNNLIASFVFDNNDWPYKIKILNSCNGLLYIHKVGD-ENFCNGIL 142
Query: 62 NPMTNEFFEL---PEREYDESSPYYGFGFNPKTKEYKLFRVTKRDRYEFYSIMEIMRFGD 121
NPMTNEFF L P+ + ++ S +YGFGFN KTK+YKLF+ D + + +ME+MRFG
Sbjct: 143 NPMTNEFFILSTQPKVKNEDISCFYGFGFNLKTKQYKLFKAI-HDEEDSHLMMEVMRFGK 202
Query: 122 RSGTKEEWRHFKCPPINFDDHGAYLNGVIYWMGKEKGKAYVIYALDVETEQMELVADLEV 181
TKE WRH C P F G YLNGVIYW+G++K VIY+L+VETE++E + L+V
Sbjct: 203 NEETKE-WRHLTCLPFVFYCDGVYLNGVIYWIGRQKENKSVIYSLNVETEKIESITVLKV 262
Query: 182 GP--HNFRYNGYIATLNKSVYAYVPIVGPCCTKIQVWTMQEKKSWIREFVMHDEVSRALR 241
P + Y YI N ++YA + I G CC K+Q+W MQ K W++EFV+HD R +
Sbjct: 263 DPSYNTSDYGYYIGKYNGNLYATIWIHGTCCKKVQLWMMQGKDCWVKEFVVHDIEDRYVD 322
Query: 242 MPMQLVKVLKDGERWFFVEGN-ILCCDKTGMNIKTESLWNRKIETRFD---GLCQIESLN 301
+ LVK+ +DGERWF+V ILC DKTG IK + R R + LC +SLN
Sbjct: 323 AFLVLVKIFEDGERWFYVGSRLILCYDKTGTQIKKKCRMKRVSNGRGNLVGQLCHFDSLN 382
BLAST of Chy9G158770 vs. NCBI nr
Match:
KAE8648955.1 (hypothetical protein Csa_007901 [Cucumis sativus])
HSP 1 Score: 255 bits (651), Expect = 4.93e-80
Identity = 139/304 (45.72%), Postives = 193/304 (63.49%), Query Frame = 0
Query: 9 IHCIDID-TMSCVGSFGFEDDHNHSTVSIISSCHALLLISKLIDTDDLCEGILNPMTNEF 68
++CIDI+ T + + SF F+++ + I++SC+ LL I K+ D ++ C GILNPMTNEF
Sbjct: 1 MYCIDINRTNNLIASFVFDNNDWPYKIKILNSCNGLLYIHKVGD-ENFCNGILNPMTNEF 60
Query: 69 FEL---PEREYDESSPYYGFGFNPKTKEYKLFRVTKRDRYEFYSIMEIMRFGDRSGTKEE 128
F L P+ + ++ S +YGFGFN KTK+YKLF+ D + + +ME+MRFG TKE
Sbjct: 61 FILSTQPKVKNEDISCFYGFGFNLKTKQYKLFKAI-HDEEDSHLMMEVMRFGKNEETKE- 120
Query: 129 WRHFKCPPINFDDHGAYLNGVIYWMGKEKGKAYVIYALDVETEQMELVADLEVGP--HNF 188
WRH C P F G YLNGVIYW+G++K VIY+L+VETE++E + L+V P +
Sbjct: 121 WRHLTCLPFVFYCDGVYLNGVIYWIGRQKENKSVIYSLNVETEKIESITVLKVDPSYNTS 180
Query: 189 RYNGYIATLNKSVYAYVPIVGPCCTKIQVWTMQEKKSWIREFVMHDEVSRALRMPMQLVK 248
Y YI N ++YA + I G CC K+Q+W MQ K W++EFV+HD R + + LVK
Sbjct: 181 DYGYYIGKYNGNLYATIWIHGTCCKKVQLWMMQGKDCWVKEFVVHDIEDRYVDAFLVLVK 240
Query: 249 VLKDGERWFFVEGN-ILCCDKTGMNIKTESLWNRKIETRFD---GLCQIESLNFGSIQNI 302
+ +DGERWF+V ILC DKTG IK + R R + LC +SLNFGS+ NI
Sbjct: 241 IFEDGERWFYVGSRLILCYDKTGTQIKKKCRMKRVSNGRGNLVGQLCHFDSLNFGSLPNI 300
BLAST of Chy9G158770 vs. NCBI nr
Match:
KAA0039382.1 (F-box protein [Cucumis melo var. makuwa] >TYK00570.1 F-box protein [Cucumis melo var. makuwa])
HSP 1 Score: 230 bits (587), Expect = 2.49e-70
Identity = 139/309 (44.98%), Postives = 183/309 (59.22%), Query Frame = 0
Query: 2 TRECNFKIHCIDIDTM-SCVGSFGFEDDHNHSTVSIISSCHALLLISKLIDTDDLCEGIL 61
T CN KIHC+DID+ S V SFGFE D ++ ++I++SC+ LL I K D LCEGIL
Sbjct: 14 TPWCNPKIHCVDIDSKTSYVASFGFEGDWSY--ITIVNSCNGLLYICKF-TFDSLCEGIL 73
Query: 62 NPMTNEFFELPEREYDESSPYYGFGFNPKTKEYKLFRVTKR---DRYEFYSIMEIMRFGD 121
NPMTNEF E+P+ E + GFGF+P+TK+YKLFR + + + IMEI F +
Sbjct: 74 NPMTNEFMEIPQPEIELDVHSIGFGFSPRTKQYKLFRTEPEVLENLKKCHYIMEIFTFDN 133
Query: 122 RSGTKEEWRHFKCPPINFDDHGAYLNGVIYWMGK--EKGKAYVIYALDVETEQMELVADL 181
G K+ WRHF+ P HG YLNGVIYW+GK EK VIYALDV+TEQME +A L
Sbjct: 134 --GYKQ-WRHFERLPFVVFHHGQYLNGVIYWIGKKLEKEGEAVIYALDVDTEQMECIATL 193
Query: 182 EVGPHNFRYNGYIATLNKSVYAYVPI----VGPCCTKIQVWTMQEKKSWIREFVMHDEVS 241
E+GP F NG I + VYA + + V P KI++W MQ K SWI+EF + +E
Sbjct: 194 EIGP--FLKNGSIKIFEERVYAIISLMDKRVSPTSYKIELWRMQTKDSWIKEFSIDEE-- 253
Query: 242 RALRMPMQLVKVLKDGERWFFVEGNILCCDKTGMNIKTESLWNRKIETRFDGLCQIESLN 300
L+ V +DGE ++ NI DK+ IK ++L + + G I S+N
Sbjct: 254 -----SFGLITVFEDGELLIAIKDNIFRLDKSRKKIKIKTLNRSESRIKVIGCNTINSIN 307
BLAST of Chy9G158770 vs. NCBI nr
Match:
KAA0039401.1 (F-box protein [Cucumis melo var. makuwa] >TYK00589.1 F-box protein [Cucumis melo var. makuwa])
HSP 1 Score: 219 bits (558), Expect = 1.95e-68
Identity = 100/121 (82.64%), Postives = 111/121 (91.74%), Query Frame = 0
Query: 63 MTNEFFELPEREYDESSPYYGFGFNPKTKEYKLFRVTKRDRYEFYSIMEIMRFGDRSGTK 122
MTNEFFELPE E+DES P+YGFGF+ KTK+YKLFRVT DRYE Y IMEIMRFGDRSGTK
Sbjct: 1 MTNEFFELPECEFDESHPFYGFGFSLKTKQYKLFRVTYDDRYELYCIMEIMRFGDRSGTK 60
Query: 123 EEWRHFKCPPINFDDHGAYLNGVIYWMGKEKGKAYVIYALDVETEQMELVADLEVGPHNF 182
EEWRHFKCPPI+FD+HGAYLNGVIYW+GKE+GK +VIYALDVETEQ+E VA LEVGPH+F
Sbjct: 61 EEWRHFKCPPISFDNHGAYLNGVIYWVGKEEGKEHVIYALDVETEQIESVAVLEVGPHSF 120
BLAST of Chy9G158770 vs. TAIR 10
Match:
AT1G53550.1 (F-box family protein )
HSP 1 Score: 66.2 bits (160), Expect = 5.1e-11
Identity = 49/196 (25.00%), Postives = 94/196 (47.96%), Query Frame = 0
Query: 44 LLISKLIDTDDLCEGILNPMTNEFFELPEREYDESSP-------YYGFGFNPKTKEYKLF 103
L+ S+ I+ + L I NP T E+ LP++ +E + Y FG++P K++K+
Sbjct: 134 LICSQHIEENYLFALISNPTTGEYIALPKQRMEEMNSETIIEKVRYSFGYDPIDKQFKVL 193
Query: 104 RVT--KRDRYEFYSIMEIMRFGDRSGTKEEWRHFKCPPINF--DDHGAYLNGVIYWMGKE 163
R+T R +E+ S +++ G + WR+ +C +++ +D G +NGV+Y+ +
Sbjct: 194 RITWLHRGSHEWSSEYQVLTLGFGN---ISWRNTQCCVVHYLLEDSGICINGVLYYPARL 253
Query: 164 KGKAYVIYALDVETEQMELVA---DLEVGPHNFRYNGYIATLNKSVYAYVPIVGPCC--- 221
+ Y I DV TE+ + D+ + + L+ S+ Y +G C
Sbjct: 254 DNRKYTIVCFDVMTEKFSFTSIDKDMTI----------MTNLSFSLIDYKGKLGACICDH 313
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LPH0 | 7.1e-10 | 25.00 | Putative F-box protein At1g53550 OS=Arabidopsis thaliana OX=3702 GN=At1g53550 PE... | [more] |
Q9LM89 | 2.8e-06 | 23.83 | Putative F-box protein At1g20657 OS=Arabidopsis thaliana OX=3702 GN=At1g20657 PE... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KUJ1 | 2.1e-174 | 94.72 | FBA_3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G643280 PE=4 ... | [more] |
A0A0A0KSJ2 | 1.1e-66 | 45.98 | F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G643290 PE=4 ... | [more] |
A0A5A7T7C6 | 1.1e-56 | 45.10 | F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001850... | [more] |
A0A1S3CB99 | 1.2e-55 | 44.77 | F-box protein At3g07870-like OS=Cucumis melo OX=3656 GN=LOC103498749 PE=4 SV=1 | [more] |
A0A5A7TCP6 | 3.2e-53 | 82.64 | F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002060... | [more] |
Match Name | E-value | Identity | Description | |
XP_004141601.1 | 2.37e-224 | 94.72 | F-box protein At3g07870 [Cucumis sativus] >KGN52549.1 hypothetical protein Csa_0... | [more] |
XP_004141602.1 | 5.10e-82 | 45.98 | F-box protein At3g07870 [Cucumis sativus] | [more] |
KAE8648955.1 | 4.93e-80 | 45.72 | hypothetical protein Csa_007901 [Cucumis sativus] | [more] |
KAA0039382.1 | 2.49e-70 | 44.98 | F-box protein [Cucumis melo var. makuwa] >TYK00570.1 F-box protein [Cucumis melo... | [more] |
KAA0039401.1 | 1.95e-68 | 82.64 | F-box protein [Cucumis melo var. makuwa] >TYK00589.1 F-box protein [Cucumis melo... | [more] |
Match Name | E-value | Identity | Description | |
AT1G53550.1 | 5.1e-11 | 25.00 | F-box family protein | [more] |