Chy9G157340 (gene) Cucumber (hystrix) v1

Overview


Name	Chy9G157340
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Regulator of nonsense transcripts UPF3 isoform X1
Location	chrH09: 204900 .. 219634 (-)
RNA-Seq Expression	Chy9G157340
Synteny	Chy9G157340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGAGGAAAGATAGAGATAAAGAGAATAGAGAACACAACAAATAGACAAGTGACATTCTGTAAGAGAAGAAATGGACTTTTGAAAAAAGCTTATGAACTCTCTGTTCTTTGTGATGCTGAAGTTGCTCTCATTGTCTTCTCCAGCCGTGGCCGTCTCTATGAATACTCCAATAACAGGTTCTTCCATTCCTACCTCCATTATTATTATTATTCTTTTCCTCTTCATCCATATTTTACTTCATTCCCCAACACCTATACCACACCATTAATATTATTCCAACTTCTACTTAATTAACCTTTTAATTATTTCCTCATCTTCTTCATCCTCTTTTTCTTTTTCTTTTTTCTTTTTTTTTTTTTTTGGTTTTTAGGGGCATACATGAAGAAATATTGTGTTTAATTAATCACCTCCATAAGTAATAATATAGATTTAGTCTTGGTTTATATACTTTTTAACTTTTGTGTCCATAAAAATAAGATTTTTAAACTTATTCCAAAATGATCATTATTGTAACTCAACTCTTATACAACTTCTTCTATCGGCCATCTCGAAGTTGGAAGTTTTATTTCTGAAAAAAATTGTTTTCAAAAGCCCTTTTAACCTCAACTTTCACATGAGTATCTACCAAGTATTTCCATGAATTTTTATGAAGTTTGATTAGACACAAGATTGAAATTTCAAGGAAATATTATACGGATGCAAAAATTTAATGGTTAACAGGGTAATTTATTAAACAAATTATAATGTTTAACAACTAAATATACACAAACCTAAACATTCAACAACTTATTAAGAAGTTACAAAATTTGATAGACTCACTAACAGACTTTCAACCCACCCACTGTGAAAAGAAGCAGTATGGATCTTGAGAGTTTTCACATGTGAGTAAGGGGTATCTCGGCTAGAATGTCAAAGTCAATGACAACACCAATACGTAAAGTTTTTGGACTAAACTTGTAATTATTCCTAATGGTTTATTCCTAGAGGGAAATATGAACAAAGGATGAGAAAGAAAAAGTAAGAAAAAATTGGCCATATATATGACTGCCAAAACCCTATTTTTCATTGTGTTGGATTTGGAATGGATATTCATCAAAAGTGTGGTTTCCTTGTATAGTTTAGATTTATGAGGCATGAGCTATGTTTAACAAAATTCTGCCCTAAATATGTCATCTTTTTTCAACAATGAAACAACTGTTCATTTTACATTAAAAAGGAAAGAAAACAAAACACTTCTTCCCTTTTCAAACTCAATGTTCCCTTCATTTCTAGGGTTTCAAACCTTACACCTCCGACCAACCCTTCAAAATAACATTATAAATAACAACTTCTTTTAATTTTTACAGAATTAGAAGTCCTTTCGTAAAAAAAATTTAGTTGAAATATTTGAGTGCACCTTCTCAATCACCTTATTTGTCTCTCGTTAAAAATAACTTCATTGGGTTTTAAAAATTAGGTTTTTTGTTCTATTTTTTCCAAATTTAAATTTGAGGAATTGTTTTAAATAAGAAAACTATTACAAATATTTACAAATATAACAAAATTTCATTGTCGATAGTCACATAGACACATATATTATCATAGTCTATTATATCATCTATCAATGTTGTTTTTCCTATGTTGTAAATATTTTGTTTTATTTTGCACAAACAACCCTTGAAAATAGAAATATTGATAAAGTATATATATTCTTAGAATAATCATGAAACCTATAAAAATATTCAAATTAATAATCCCTAAGGATTTCACACATTTCATATAATTAAGCTTAGGAAATTCTAATCATCATGTTTTGTAAATATATATTGTAAATGTCCTCCATATCCAATTCCTAGCTTAGTCTCTCTCCCCTCATTATGTTTTGATCTTTTTTTACTTAGATGCCTTTTTTTCTCTTATTATGTATCATCTGCTTCTCTGGACTTGTTTTTGTTGATTTCCAAGAATATTTCCTATTTCTTTGGCTTCTCTGTTCTTGTTTGTGTGAGTGTGTGTTTTAATATTCTTTAATAATGAATCAGATTATTGTCTGTCAAAGTTTTGCCCCATCAATCTTTTTAATAACTATGCTTAATTATTTTGTTTTCTAGAACAATGTTTCTTATCAGAAATGTATTATTGTTTAACTTGTTCAAAACTTTCCTTTTCTGTTTTATTATGAAAAATATCAATTCATACTAATAACTAATAAGATTTGAAATTGTACTAATTCAAACCTACGTTTAAACCTTTTTTTTTTTAAAAAAAAATAAACCTGTAAACTGTAAAAAGAGTATTAGTTTTATTTATGTGAAGCTTGAGAAAACCAAGAGTGTGAAGTCTGACAAAACAGCTTTGAAACAAGCTTTTCCAATGGCATTTAAATTTTTATAGGACTATTCAAAACACTTGTCTTTTGTATATCCATTTTTTCACACCCCTTTGCATTTTTCCCTCTTTGTGTAAATATCCATAAACATAATCTCTATACAGAATCTATAGCCCATACATACATACACCATCTCTCTTTCACTTTTCCATTTTAAGCTATAATAATTAGTTTAAGTTTGTTCCAATTCCCCATATCTCCCTTTTTCTCCCTTTGCTATATCTTTCTTTCTTCCATGGGGTGTTCTTTTCAAATTTATAGAAAAACCCTCCAAAACAAAACCTAATGGTACCATTACCTATTCTCATGTCAACAAAAATTTAAGCTCCTGACATTATACTACCAGTCTTCTCATATGCTTTGAATATCTAGATTTGAACACACTCACATACTGATTATACAAAGAGAGAAAGAATGTTTCATATGTAAACATATATAATATCTTAAGGTGCGATTAACCTTCCAACTTGTTTTGGGTGAGTGGCCAAAATGTTTAAGTCTCCTACTATCATAGCCATATATTATTAATAACTAAGGGCACAGTAACATTAAAATGAGATGATTTTGTTCTTAATTGACTTCTATTAGTGATTCTAAAAATGTGTGTTTCATTTTTATTATTTTATTTTGCAAATATGTGATAAGGGGAGAGAGAAGGGTTAAGATGGCCTTTTATAAACTTCTCAGAGAACACCACTGATCCAAACCATCTTGGTCTATATTTATTGATTGTTGGACTAAAAAAAACTGGCAATTAAATTTGGTATTAAAGAATATAAAGAAATCAGAATGAAGCATGTTAAATAATATGACTGTACAGTCTGTTTTCTGAAATTTCATCATTTTCATGTCAAAGCTCAGTTCATTGAAGGATCTGTGTCTGAACATACACATTTACATATATTAGGCAATAATTGGAAGTGATTTTGCATCTGCTTTGGCCATTAAAAAAGTCTTGCTCCTAAATATCTTCTGTTAGCTTTTCTAAAGTCTCTTTCATCGCACACACACACACACATTTATTTGCTTTCATCAATTGATGAAGACAAACCAATGGATTAAGACATTTTATTATTAACTAAATACTAAAGGTACAAATCTATATATGTCGTCCATTCAAAAAAAACCTTTAGGGGAAGGAAGAACGTATACTTATGAAAAAAAAGAATAAAAATCTTGCTAATACTTTTATTATTATTATTGTTTTTTGTATTCTTCTGATTAAATATGTTTTACACTTTAATTTTGATAGGAATGTGTTCAAAATATAGGAAAACAAATCAATATATTTACAAAATATAACAAAATTTTAGTATGTATTATTACTAATTGATAAATTTTAAATTTTTTTATTATACTTGTAATATATATTTTAAGCTGTTTTTTCCATTTCAAGAATGTAATGCAAAGGTAAGCCTTGCTTTTGAACAAAAAGTCAACTCATTTGTTATGATTAGAAGTGTAAGACTTTCCTAAATGATAGACTAAAATAAAATAATCAAAGTTAAGGTTACAGAACTTTGAGAATTTGGTAGCAAAAATTTAGTATTAAAAAGCTAAAAGGTTTTGCACATTATTTGAAGTTTTCCTCCCCCAAATTTATGGAGAAAAGCAAGCTCACATGTCAAATTCTTTTCAACTTTATGTTTTATAGCTATACACATAGCTAACATAATTATATCAATACCATTAGCTAGTCTAGTAGTAAAACGGCGTCTTCCAACCCAATTAAATTTAGTTTCAAGCCATACTGTTTACATTAGTACATGTAGAGCTATTATAGTGATATTTGGTTTCCAATGTCATTTCATTTTCCAATTATATATTAACTAATTGGCCGTTGAATTGGTAATTATCCTAAGATTAAATATGCTGTGTTGATTAGAAAAAAAAAAGAGTGAATGAATGCTTGGAAATCAAGAATGTTAACAATGGAAATTGGTTTGTATAATTATATGTGAATATTGCAGCATCAAAACAACTATTGAGAGGTACAAGAAGGCTTGTTCTGATAGCTCAGCTACTAGCTCTGTCACTGAACTAAATACTCAAGTCAGCTTCTCTCTCTTTCTCTCTCCCTCTCCTTAATTAATTATTTTTGAAATCTCGAGAGTAATTTTAGACATTCAAAACTGAGTGTTATAACACATACACGATGTTCAATAAATTCATAAGATTGTAATATATAACAAGTTAATTATTTGGTTTAATAGTCTTAAAAGTTTTCTCTAGCTATGATATAGATTTTTTTCTTCTCAAATTTCTTAATATTCATGAAGCCTAACATGTTATTATGATATGATATATGAAGTATTATCAGCAAGAATCGGCTAAACTGCGTCAACAGATACAAATGCTTCAGAATTCCAACAGGTTATTATTATGAGTGACTTTCTTTAATACGCCATTCCATTTATAAACATATATGATATATAATATTGGGCTAAATATATAATTTTATCTTGAATATTTGTGTTTCTCTTTTGTTTGTTTTTTTTCTTTCTCCAATTTCGTCCCTAATTTTTCTTTGTGTGTGTGTGTGTTAAGTATAGAGGTATTAAAGAAAAAGATTAGGGACGAAATCAGAAAGAAAAAAGAAAGAAAGAAAAGAGGGAAATAAAATATTGAAAAAGAAAAAGATTATATATTTAGCCAAAAAAGAAAGAAAAATGAAAGGTGGGGTTGAATAAGCTACTCTCATGTGTTGAAGCAATCTTGTTAGGCACTTGATGGGGGACTCCTTGAGTGCTCTTACTGTCAAAGAACTCAAGCAGCTTGAAAATAGGCTTGAAAGAGGCATCACTAGAATCAGATCAAAGAAGGTTTTTATATATACATTCTTACTCAAACTTTTTTTTTTTTTTTTCATTTACATGATGACGATCACTAATTAAAATTTGAATCTAATTAAATAAGTATATTGATTAGGGTATATCTTCTCTCTCCGTTGAAAGATTGAACAATATGCATTCTAGTTCTATGCATATATTTAGTATTTGGGCGATTGTGATATTTTGTGAGTGTTTTGTTTGTCAAAACATTTAAACGTTACATCTCATTTGAATTTTGTGATCATGATATTAGATTGTATATTTGTCTTGTTTTGTTTTACAATATAGGGGGTGGGAAAAAATACAACATTTAACTTTGGAGCTTGATAAAAACAAATACTATATTAGTTTAAGCTATGCTATATTTTCTTTTCTAGGAATGTCTCATGATGATTAATTGTTGTTGCACTGATACTTCCCATCTTCCCCTTTTATATAAAGTTAAAAGTAAGTAATATATATATTTTTTTTTCCTTCTTAATTTGTTGAACAGCACGAAATGTTGCTAGCAGAAATTGAGTACCTTCAGAAAAGGGTAAGTAATCTAGACTGAAACCAAACCACCATACACACATTTACCTTTCTAATTAAGTTCCTGAACTTTCGGTAAAAAAAGGAAAGAATTTCTTGTTTCAATTTATATAAAACTTTAGATATATATAATTGGGATGCTCTTCCTTGTATTAGGAGATTGAGCTGGAGAACGAAAATGTGTGTATTAGAACCAAGGTATGTATACATATCAAACATTATGCATGATTCCTTGTATATATATATATATAGATCAGAGAGATGGGAGATTGAAATGGACAATATATATTATAGCATTGATGCTAAATTTGGTGAATATAATTAATATAATGTGTTTCAAACATCAAACAGATAGCAGAAGTAGAGAGGGTTCAACAAGCAAACATGGTATCTGGACAAGAACTGAATGCAATACAAGCATTGGCTAACTCTCGCAATTTCTTCTCTCCCAATATTATGGAACCAACTGGACCTGTTTCTTTCTCTCATCAAGACAAGAAGATGCTTCATCTTGGGTATTCTTTCTTTATTTTGATTTATTCTCATCAACACAATTTCAAAATATATGTTAACATTAAGAAAGATTCAATTGAAATATAAAATCAAAAAGTCAATACTGATCTTATGTTTGAATTGGCAATGAGTACTTTTTTTTCTCTTGTGATACCACAGGTGATGCTGTTTTGGAGACCAAAATGATGGGGACAATTGTTTGTTTTAATTAATATTCAGAAAATCATTGAGATTACTAAAAAGAATTAAAATAAAATATGCCCATCATTTTCTGAAGTACAAAATTTAATTAATTTTACTCAATGATCAGTGATGATCAGAGCGTGAGATGTGATTTAATTTGCAGTTTGTGTGTTTCAAATCCTATATAAATGTTATTATATACTACATACATATGATATGATATATATATAATATGCTACAATGACTCTAATGCTAATGATATGTAATTTTATGGATGATTTTTTGTGCCTACATGGACCAATATGTAGGAATGTGAAACTTGGCAACTTTTAAGTTTCTACTTTTTCTCTTAAATATGGTTTTATCTAAGTTTAATCAATTCAACTCTTAGCTTTTTCTTTTCTGTTCATGAGAATATATAGCTCTCTTGTTCAAATAAGTGCTATATCATACACATTATTTTGTAGGTATAAATCAAGGCATAATGCAAAATTCATGAATAGGGCTTTACAGAATGACAATGGATTTAATTACATATAGAAATGGTTGCATACATGAATTTACTAAAGACACTAATATGAATCTTCATATTTTGATGAAAACTCACATGCATTCATACTTAATGTTGGTTTCTTTCTTTTTTTATATACTTTTTTTACTAGTATAAATGTAATGCCCTAAGTTAGAATGGAGACATGATTGAACCGATATCACATCTAAATGCGAGAGATCTTACGACATAATCAAAGTAAGGTAAAAAATAATGACTTAAAAAAAGATAAAAGTCTATACCAACGAGGTACACCTTCATTGTGGAATTGATATCGCACGAAACGTAGGGGAATGTCAGGGTCTTCCATTGCTAAATCCTAGACTTTGAATCATAAATATGCAAAAGAGTTCTCATTTTTCTTGTGAGTAAATTAAAATATGATAAATCCGATTTCACAATACCAATACTTGAACATTTTCGTATAGCTGAAACTGTAAGAGTAGTGGTTTAGATCATGAAAAATATGGTTACACACAGCTTATTTGGTTACAAATTCCATCTCATTCTTTGCATCAGTAGTTAGTGTGATTATGTTCATTATAAGTGGTTTTGCTTTGAAAAGAATAGGATTTGTGCATATCGTCTTTGTTAACAATTGCTATGTGTGTTGCAGTTATGCATATCCTTGTCATATAGTTTCCTTAATGGGGGGTTTGGATATTATTAAATGTCTCAAATTGAAATTCCTATATATATGATTTGAAAGTAACATTTGTAGTTGCCATTATCTGTCATTTTGGAGTAGTTGTCGTTTCCTCTTTCTTAGGTATGTGGTGAAGCTTTTCACTTAGGTAGGCTTAGGGTAAAAGGGCTCATATATAGTATATACAATACCTTTGTCATCATTTCAGAGTTTTCAATATACATATATAGCTTCAACCATAAGTAGTTAGTTAGGTTAAACTTTAAAGATTGAGAGGGCTAATTGTAAAACAAATTAAGTACTTGTGGTGTGTGTTTGATCGTTTTTTTTTTTATATATATATTTTTGGATATGGATATTGTGGTGTGGTTTTTGTGTATTCACACGACAACAGAAACAGAATGAAAAATAATAATATAATAGAATTTACATTTTTCTACGATAAAGTGTTGAGAACAAGCTCTATTTTTCCTGAAGAATGAAGAGTTTTGGGCTATCAATCCTAGTGTTGTTATTTTTATTTTTACTTAGGATCTTCTTATCGTACATATTGTATCATCGGTTAGATCTACTTTTGTTATTAATTTTTTTTTGTATGTAACAAGTTTCGTAGTTTAGGGGTGGCTTATCTAGGTCAATGATATAGTTGATATTTTTTTTTCTTTTTGAAAATAGACTCTAAATTATCCTATTATTGTAGATTTGTAGTTAAAGAAAAACAAAAAAGAGTTTGGGCCTTTAGGTGGGGGACGAAGGTGGTGTAGTAGTGGGCCTGATAAGAGTGAAAGAAGCCCAAAAGAGTTAGGCGTGCTTTCGGTCGTTTCATCTTCTCCGAACTCTCGTCGTTAGCGTTAGTAACCCCAATTCCCAAAAAAACATTTTGTTGTTCTTGACTTGGTTGAGAATTTAGAAACCAAAAGCCGGAGGGGAAATTCTCGAATTCTTTTGTTGGTGTTCGCAGTGCGAGTGCGGGGGGGGTTTTTCAGATGAAGGACCCGTTGGAGAGGACCAAAGTAGTGATTAGGCACTTGCCCCCTTCTCTTTCTCACTCAGATCTCTTCCACCATATTCATGATCGATTCGCTGGTCGCTTCAATTGGTCTTACTATCGTCCCGGAAAGACCAGGTTTCCCCCTTTTTCTCTATTCTCCATAAAATTACTCTTCCCAACTGGGTTTTCACTTTTATGTTGTTATCATGTCCTCCTTCTATTTTCAGAAATCTGGATGTTCTTTAACGCTTTTCGCCAACTGGGTATTTTTCGTATTGTGCGTTTGTGTGCTTTATCCTCTTTCTTCCACCTTACGTGGTTTCCTTGGGGGTTGGTGTCATTAGAATGATTGCTGTAGGACGCCCTTTCAATTTCATGCCCAATTGTTGTTTATGATTGTCATCTCAGGATACTAAATCAAAAAATCGTGTTCTATACTTTGTGTTTTTTTTCCTTTTCTCTTGGTTTCTATGGACTACAGCTCACAATACTGAAGGGTTTTTACTCATTCAGAGGTTTCTTCTGAAATAATTTTGCAGTCAGAAGGACCAGAGGTACGCTCGAGCCTACATAGACTTTACCAGACCTGAAGATGTTTTTGAGTTTGCCGAGTTCTTTGATGGCCATGTTTTCGTTAATGAGAAGGGTAAAGCCGAAAGCTTTTTCTCTTTTTCCTGTATTGAACTTATGAGTGGCTTCTTGTTTCTTATGGATTTTGTGGGTGGTTCACTGAAGCTCAACCCGTTTCTGAGAAGAGGGAGATAACAATTTTATGAATGACACCAATGCTTAATATAGATTGCTCCCCTTTATGTTTTCTGATGTTCATTTTCCAATTGACTACATATCACCTTCGCTACTGTGAAAATGTTTAATTGTTCAAAACATGTTTCGTTCAACATGCTTAGAGTTTTGATTGAAGTTTAACTTATTCTAGTCAAATGATTACAGGTGCTCAGTATAAGGCTGTAGTTGAATATGCACCTTCACAGCGTGTTCCAAGATCATCTACCAAGAAGGATGGTCGTGAGGGGACAATATACAAAGGTAATGATTAGTTAGTGAGAAGATGGAATAAGTGATTGCTCTTGTTTTGTAAATTTTCTTTTCTCGATGAAAGCAGATCCAGATTATTTGGAGTTTCTCAAACTTATTGCAAAGCCTGCCGAGCATCTTCCAAGTGCTGAAATACAATTGGAAAGGAAAGAAGCAGAGCAATCTGGTTTGTTATTATGTTCACTTACTGGATTATTGACATTACTTGCATTCGTAAAGTCATTACTCATTGCAAGATTGCCAAATATGTATATGATGTAAAATAGAGGGCCAAAAAGTTCCTGAATAGTCATTCTGTAACTTTGCAATGAACTGCCAGAGGGACACTATTAGCTCCAAATTTGGATGATTCTAGATGTTTTATGTATCCACTTTTGTTCTTAGGTGCTGCAAAAGAAACTCCAATCGTTACCCCTCTCATGGAGTTTGTACGCCAGAAACGAGCAGTTGAAAGCGGAACACAGGTGAGATTGCTGTATTCTTAATGGAATGGACCTGTATGTGTGCTATATTTTAGAAACTACTTGTTCACTAAAATGAAGGTTGGAACCAGTTAATTTTACTTTATTTTTTCTACTTCACAAGATATTGGTTCTGTCCATATAGAAATCAATATTAATACATTAACTGAGGTGACATTCCTCCGTTTGAATTTATCTGTTGCTTGTGTAATGATTTCAGTTTCTTTTCCTTTCATGTGGGTTAATTTCGTGCATTCTATGAATCCAAAGGGTCTTAGGATGGTTGCCTATGTGGTCTTGAAGATTTTTATTCCTCTTCTAACTTATAATATATCAATTTCTCATTATCTCATGCTAAGTGTTTTGATTCAATAGGGATCTTCAGTACCTCGGAAGGTTAAAAGGGGTGGGGCAGCATCATCTAGAAAGCCTGAGTCAAATTCCATGAAGCGAGGGATGGAGAAAAAGAAGGCATGTGCTACTTTCAATGTTTTTCTTTTCCTAACGTTATAAGATCCCAAGTGTTGATTTGTTACTTGCTAGTGTCTTCACTATTTCTGCCCTATTGTTTTTGGGAAAATAAGCTTTATTGGCTTGTCGTAGATCCAAGGGGTAAGGCAGTATTTTTAACTAACAAATGCCGTAAGGAGAATTACAAAAGTTCTTGGTTACATATGCCTAAAGAGAGGCATCAAACCAGCATTTGTCTCAATCTCCTCCCAAGACCTCTCAAAACCCTTGCTCTTTAGTCAAGTATTCCATTAAAAAAAATCTAGTGAAATATTTTACAACCTTGATCACATAAGACCACAATCTATATTACAAACCAAACTTACTCTGAAGGCCTCGAGAAAAGTTGGAAATCAAGGCAGCAAACTGTCATCGCTAAAGGATGCGATGTGATCTAAATCCTCAAATGCTCCCCTACTACGAATGCATTGGTGCAGCCCGAACACAAAGGAAGATTGTCCCTGTATATAATCTTTTTTTTTTTTTTTTTTTGATAGGAAGCATCTCTGATATAATCTATAATGTCAACTACCTATTGCAAGTCCTTGCTTCTAATCATGCCACTCTAAAACCTTGACATTCTTGGAAGTTTCTTCCTTTACGGTGAGGTGGAGTTAAAAGTAATGATATTGATGGTGTTGAGTCGTTGACTGTGCAGAAACCAACCTAAACTGTATCCAACGAGACCACCTCAAGGTCATGAACCATGAATGTTGGAATTGATGGTTTAGTTTTTTGGCCCCTAGATGCATACTTGGCTATCCTTTTTCGTGAACAACTTGCGTCTTCTATATTTTTTGTCTGAAGGTTTTAGTTATAATTTCTGTTATACATGCAGTATATCTTAAAGGACAGTGTAAAGAACACAAACCGCAGAGACAAGTCAAATTTCATTTTAGTGCCCAGGCGAGAGGATCAGTCCGCTACTTCAAGTGGAATTGGAATTTCAGATGTTGGTACAGGTATATCTATTTATGTCTTTGTGGTTGGCTAGGTCATCTAAATTGTCATGTTTTGTTCCAAGTTATTGATCCAAAATTTTATTAGTAGACTGTTGAGTATGAGTGATTTAAACTCTCTTATCAATTCAGTGTTACTAGTCATTGAGGAGCAGAGGAACGTTGCCTATTTGATTTAATCTATGAACACTTTATGCCCTACTCTGCTGCCAGCTTGCAATTTTAAATAACTTTTTCCAATGCATGCTTGTTATGATGGGACTTGTTTTGTTATTTTTCTTTCTGGAGGAGTTCTCAGAACTATTTTTCGTTTCTCCCATTTCAAATTACCCAGAGCCCTGTAGTAATGCTCTTGAAAATCTAATTTTTCTCCTTATTAATAATTATCACATTGTTTCTTGCTGGGATTTTTCCATATTGTGATGTGCAGGTTTTAGAATTATAATATTTGGACCTACATTTAACATAGGCACAATTGGCTTACCTTAAACACTTGGAAGTGATATATTTGAGAGATGGAAGGGGGCACCTTTGCTTTGTCTTATCAAATTATGTTTATCAGGAAAAGGAAAAAATAAACAAGGTCGTCCAGTAGATAACACATGTCTGAAATTTTGAATTATGTTCTTTTGCTGCATTGGACTTGCTACAAACTTATTTCTTTTAATTTATCAATATGTTCTACATGTTTATAATGAACTTGCAGTCTAGAATTTGAAGGCTCTATTTCATATGTATCTGTAACAGCTGACTTTGGAAAGAAAAAAATTCTGCTTCTCAAAGGAAAAGCGCGAGATATATCTCATGTATGTTTCTTTTGTTCTCTTGACTAATTATGTGATTACAACTTTTGTTTCTCTCTTCAGAACTATTTACTTCCATGAATGATTTCCAATCTCACTCGAGGCTTATTTTGGGAGGACACAAATTTCATTCTTTTTCCTTGAATTTTAACACCTATCCATTTGATGGATAATGATACTTTCCAGGTTTCTGATGACATGTTACAGTTGCAGAGTGCTACATCTTCTGGGAATTCTCCTGCAAGTGCATCAAAACATAATCATAGGCGTGAGGCTGGTGGAGGCGTGATCAGAAGCATTCTTTTAAATAATGAAGCACGTCATGGACAGAGTTCATCAGTAGCTCAGTCTCATCAAAAGATTGAGATCCTGAAGTCAGACAACGGGAAGCGTCCACCTCGTCCCACTAATGCTCGATCTGGGTCTAATGATATCTCCAGTAATGAACCAAATCCATCTGGTTCAGAAGGGGATGGAAAAAGGGCTTCAGACAATAAGTTTAGTAAAAAGGAACTTCATGGCCTGGGTAGTGCTAGTGAGAAGCAAGAGAAACGAATAAGAAACAAAGATAGACCTGATCGTGGAGTCTGGGCACCACGCAGTCGTTCAGATGCCTCAGTCTCACAACTTGAGGAATCCTCTGTTCCACAATCTAGTCATTTGCTTTCTGACTCAGTTGAAGGTGCTCGACTATTATACTCCTTTGGAGAATGGAGATAAAGAGACTACTTGCTTATAATATACAATCATATTATTGAAGTATCAAACCTTAATCATTGTGTCAAATCATCCTGTCTGATGACCTGTGTATTTATACTGGTACTTAATGTTTCACATATGAAATTATGACCCTATATATCTTTATGCACTTACAGCATACCGTGGGGAAATGAAAGAAGATATTCATGGAAGCAGGACTGGGGATGTTGCAACCATTGTGAGTGGGCGTAACAGTTCAGTGGAAAATGGTTGTACTTTCTCACATACTTTTCTTACGTTGTCCAACTATTTTAAGAAAATTTCCAAGTACTTTCTACTTTAGGTAATCTAAAACTCGTTGTGCTCTCTTTAGGTTCTGTTAGACATGTTGGACGTCGTGGGGCTGGCCATGTTATGAAGGATGATGGGTCTTTGAACCCAAATGAAGGGAAGCCATCCAAAAGAGGTGTTGCTGGTGGTCATGAGGTTCGCTTCTGCATCCAAGCCAGTGTCTGTATTGTATTACACGATCACTTCTTTTAAAAATTCATTCTCTTTTATGGCTATGCAGAAACAAGTATGGGTTCAGAAGTCATCTTCAGGTTCTTAGCATAATTAAATCATGTGAGTTCTTTTACACATTAGCAATGTTTTTATCTCCTTTAAGAGCGTATCTTTTATGAGGTTTTTCTCTCTAGGGACATCCAACTGAATGACTGAGAAGTTCAAAATTAACTAAAGATTCTGGTTTGAAGTACATATAGCACATGTTAAATCCATTATGCTAACATTTGTCAGATACATAATTTGGCATGCAGCTCATGATAGTTTCATGGCTCTTAGCACTTTTAATATTCTTAGTACTCGATAATTTGGCATGTAAATTAGCTTGTTTATGGTAATGTCTTCTTGTATGTTTTAATTGTTATGAACTTCGTTATTTTATAATTATTTTTATAAGAAATAGGAAACGTCAAGTTAGTGAAAATGACAGAAAGGTCTAACAATCAACCAAAAGTTGGCATATACTGTTATTTCTTAAAGGATATGAGTGTGCAGTACATTAAAACATAACATGGACGGACAAATATATTAGAAGGGGGAAGTTTATTATTGTATGTCTTGCTATGAAGGATATTACTTATTACTACTATATTATTATTCTTTGGCTGAAAGATGTACTGCTCTACTACTATGACATTTAATGTAATTGCTCACTTCCCCATCTTCAATGCTGCCATGCATTCTCTTGGAATTCAGCATATGCCTGCTGTACAGTCATACTTTCACCGATCATTGGCTAGATATTGTTGTTTGTTTTGTCTTTAGGTCTTTTTGTTTATTATATTGACAAGGACGTGTATTGTTTTCCATGGGATCATGACCGTAACGATGTCTATGTTATTCAACAGATAGTGGCATCCAGACAGGACTATGGTTCCTCAAACTTCCAGGGGGATTATCTCCATTCTGAGGACTTAATGCACATCCTCAGAAGGCATCATGTAAAATGGAGATATGCCCTGGAAGCAGTTGGTAACAGTAATAGGTTTCGTGAACTGGATTGGAAGACTTGCAATTGTTTCGTCGTATACAGGTGGTTACAAAACACAAGGTTCTCTGGTTGA

mRNA sequence

ATGGGGAGAGGAAAGATAGAGATAAAGAGAATAGAGAACACAACAAATAGACAAGTGACATTCTGTAAGAGAAGAAATGGACTTTTGAAAAAAGCTTATGAACTCTCTGTTCTTTGTGATGCTGAAGTTGCTCTCATTGTCTTCTCCAGCCGTGGCCGTCTCTATGAATACTCCAATAACAGCATCAAAACAACTATTGAGAGGTACAAGAAGGCTTGTTCTGATAGCTCAGCTACTAGCTCTGTCACTGAACTAAATACTCAATATTATCAGCAAGAATCGGCTAAACTGCGTCAACAGATACAAATGCTTCAGAATTCCAACAGGCACTTGATGGGGGACTCCTTGAGTGCTCTTACTGTCAAAGAACTCAAGCAGCTTGAAAATAGGCTTGAAAGAGGCATCACTAGAATCAGATCAAAGAAGCACGAAATGTTGCTAGCAGAAATTGAGTACCTTCAGAAAAGGGAGATTGAGCTGGAGAACGAAAATGTGTGTATTAGAACCAAGATAGCAGAAGTAGAGAGGGTTCAACAAGCAAACATGGTATCTGGACAAGAACTGAATGCAATACAAGCATTGGCTAACTCTCGCAATTTCTTCTCTCCCAATATTATGGAACCAACTGGACCTGTTTCTTTCTCTCATCAAGACAAGAAGATGCTTCATCTTGGTGCGAGTGCGGGGGGGGTTTTTCAGATGAAGGACCCGTTGGAGAGGACCAAAGTAGTGATTAGGCACTTGCCCCCTTCTCTTTCTCACTCAGATCTCTTCCACCATATTCATGATCGATTCGCTGGTCGCTTCAATTGGTCTTACTATCGTCCCGGAAAGACCAGTCAGAAGGACCAGAGGTACGCTCGAGCCTACATAGACTTTACCAGACCTGAAGATGTTTTTGAGTTTGCCGAGTTCTTTGATGGCCATGTTTTCGTTAATGAGAAGGGTGCTCAGTATAAGGCTGTAGTTGAATATGCACCTTCACAGCGTGTTCCAAGATCATCTACCAAGAAGGATGGTCGTGAGGGGACAATATACAAAGATCCAGATTATTTGGAGTTTCTCAAACTTATTGCAAAGCCTGCCGAGCATCTTCCAAGTGCTGAAATACAATTGGAAAGGAAAGAAGCAGAGCAATCTGGTGCTGCAAAAGAAACTCCAATCGTTACCCCTCTCATGGAGTTTGTACGCCAGAAACGAGCAGTTGAAAGCGGAACACAGGGATCTTCAGTACCTCGGAAGGTTAAAAGGGGTGGGGCAGCATCATCTAGAAAGCCTGAGTCAAATTCCATGAAGCGAGGGATGGAGAAAAAGAAGTATATCTTAAAGGACAGTGTAAAGAACACAAACCGCAGAGACAAGTCAAATTTCATTTTAGTGCCCAGGCGAGAGGATCAGTCCGCTACTTCAAGTGGAATTGGAATTTCAGATGTTGGTACAGCTGACTTTGGAAAGAAAAAAATTCTGCTTCTCAAAGGAAAAGCGCGAGATATATCTCATGTTTCTGATGACATGTTACAGTTGCAGAGTGCTACATCTTCTGGGAATTCTCCTGCAAGTGCATCAAAACATAATCATAGGCGTGAGGCTGGTGGAGGCGTGATCAGAAGCATTCTTTTAAATAATGAAGCACGTCATGGACAGAGTTCATCAGTAGCTCAGTCTCATCAAAAGATTGAGATCCTGAAGTCAGACAACGGGAAGCGTCCACCTCGTCCCACTAATGCTCGATCTGGGTCTAATGATATCTCCAGTAATGAACCAAATCCATCTGGTTCAGAAGGGGATGGAAAAAGGGCTTCAGACAATAAGTTTAGTAAAAAGGAACTTCATGGCCTGGGTAGTGCTAGTGAGAAGCAAGAGAAACGAATAAGAAACAAAGATAGACCTGATCGTGGAGTCTGGGCACCACGCAGTCGTTCAGATGCCTCAGTCTCACAACTTGAGGAATCCTCTGTTCCACAATCTAGTCATTTGCTTTCTGACTCAGTTGAAGCATACCGTGGGGAAATGAAAGAAGATATTCATGGAAGCAGGACTGGGGATGTTGCAACCATTGTGAGTGGGCGTAACAGTTCAGTGGAAAATGGTTCTGTTAGACATGTTGGACGTCGTGGGGCTGGCCATGTTATGAAGGATGATGGGTCTTTGAACCCAAATGAAGGGAAGCCATCCAAAAGAGGTGTTGCTGGTGGTCATGAGAAACAAGTATGGGTTCAGAAGTCATCTTCAGGTCTTTTTGTTTATTATATTGACAAGGACGTGTATTGTTTTCCATGGGATCATGACCGTAACGATGTCTATGTTATTCAACAGATAGTGGCATCCAGACAGGACTATGGTTCCTCAAACTTCCAGGGGGATTATCTCCATTCTGAGGACTTAATGCACATCCTCAGAAGGCATCATGTAAAATGGAGATATGCCCTGGAAGCAGTTGGTAACAGTAATAGGTTTCGTGAACTGGATTGGAAGACTTGCAATTGTTTCGTCGTATACAGGTGGTTACAAAACACAAGGTTCTCTGGTTGA

Coding sequence (CDS)

ATGGGGAGAGGAAAGATAGAGATAAAGAGAATAGAGAACACAACAAATAGACAAGTGACATTCTGTAAGAGAAGAAATGGACTTTTGAAAAAAGCTTATGAACTCTCTGTTCTTTGTGATGCTGAAGTTGCTCTCATTGTCTTCTCCAGCCGTGGCCGTCTCTATGAATACTCCAATAACAGCATCAAAACAACTATTGAGAGGTACAAGAAGGCTTGTTCTGATAGCTCAGCTACTAGCTCTGTCACTGAACTAAATACTCAATATTATCAGCAAGAATCGGCTAAACTGCGTCAACAGATACAAATGCTTCAGAATTCCAACAGGCACTTGATGGGGGACTCCTTGAGTGCTCTTACTGTCAAAGAACTCAAGCAGCTTGAAAATAGGCTTGAAAGAGGCATCACTAGAATCAGATCAAAGAAGCACGAAATGTTGCTAGCAGAAATTGAGTACCTTCAGAAAAGGGAGATTGAGCTGGAGAACGAAAATGTGTGTATTAGAACCAAGATAGCAGAAGTAGAGAGGGTTCAACAAGCAAACATGGTATCTGGACAAGAACTGAATGCAATACAAGCATTGGCTAACTCTCGCAATTTCTTCTCTCCCAATATTATGGAACCAACTGGACCTGTTTCTTTCTCTCATCAAGACAAGAAGATGCTTCATCTTGGTGCGAGTGCGGGGGGGGTTTTTCAGATGAAGGACCCGTTGGAGAGGACCAAAGTAGTGATTAGGCACTTGCCCCCTTCTCTTTCTCACTCAGATCTCTTCCACCATATTCATGATCGATTCGCTGGTCGCTTCAATTGGTCTTACTATCGTCCCGGAAAGACCAGTCAGAAGGACCAGAGGTACGCTCGAGCCTACATAGACTTTACCAGACCTGAAGATGTTTTTGAGTTTGCCGAGTTCTTTGATGGCCATGTTTTCGTTAATGAGAAGGGTGCTCAGTATAAGGCTGTAGTTGAATATGCACCTTCACAGCGTGTTCCAAGATCATCTACCAAGAAGGATGGTCGTGAGGGGACAATATACAAAGATCCAGATTATTTGGAGTTTCTCAAACTTATTGCAAAGCCTGCCGAGCATCTTCCAAGTGCTGAAATACAATTGGAAAGGAAAGAAGCAGAGCAATCTGGTGCTGCAAAAGAAACTCCAATCGTTACCCCTCTCATGGAGTTTGTACGCCAGAAACGAGCAGTTGAAAGCGGAACACAGGGATCTTCAGTACCTCGGAAGGTTAAAAGGGGTGGGGCAGCATCATCTAGAAAGCCTGAGTCAAATTCCATGAAGCGAGGGATGGAGAAAAAGAAGTATATCTTAAAGGACAGTGTAAAGAACACAAACCGCAGAGACAAGTCAAATTTCATTTTAGTGCCCAGGCGAGAGGATCAGTCCGCTACTTCAAGTGGAATTGGAATTTCAGATGTTGGTACAGCTGACTTTGGAAAGAAAAAAATTCTGCTTCTCAAAGGAAAAGCGCGAGATATATCTCATGTTTCTGATGACATGTTACAGTTGCAGAGTGCTACATCTTCTGGGAATTCTCCTGCAAGTGCATCAAAACATAATCATAGGCGTGAGGCTGGTGGAGGCGTGATCAGAAGCATTCTTTTAAATAATGAAGCACGTCATGGACAGAGTTCATCAGTAGCTCAGTCTCATCAAAAGATTGAGATCCTGAAGTCAGACAACGGGAAGCGTCCACCTCGTCCCACTAATGCTCGATCTGGGTCTAATGATATCTCCAGTAATGAACCAAATCCATCTGGTTCAGAAGGGGATGGAAAAAGGGCTTCAGACAATAAGTTTAGTAAAAAGGAACTTCATGGCCTGGGTAGTGCTAGTGAGAAGCAAGAGAAACGAATAAGAAACAAAGATAGACCTGATCGTGGAGTCTGGGCACCACGCAGTCGTTCAGATGCCTCAGTCTCACAACTTGAGGAATCCTCTGTTCCACAATCTAGTCATTTGCTTTCTGACTCAGTTGAAGCATACCGTGGGGAAATGAAAGAAGATATTCATGGAAGCAGGACTGGGGATGTTGCAACCATTGTGAGTGGGCGTAACAGTTCAGTGGAAAATGGTTCTGTTAGACATGTTGGACGTCGTGGGGCTGGCCATGTTATGAAGGATGATGGGTCTTTGAACCCAAATGAAGGGAAGCCATCCAAAAGAGGTGTTGCTGGTGGTCATGAGAAACAAGTATGGGTTCAGAAGTCATCTTCAGGTCTTTTTGTTTATTATATTGACAAGGACGTGTATTGTTTTCCATGGGATCATGACCGTAACGATGTCTATGTTATTCAACAGATAGTGGCATCCAGACAGGACTATGGTTCCTCAAACTTCCAGGGGGATTATCTCCATTCTGAGGACTTAATGCACATCCTCAGAAGGCATCATGTAAAATGGAGATATGCCCTGGAAGCAGTTGGTAACAGTAATAGGTTTCGTGAACTGGATTGGAAGACTTGCAATTGTTTCGTCGTATACAGGTGGTTACAAAACACAAGGTTCTCTGGTTGA

Protein sequence

MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNSIKTTIERYKKACSDSSATSSVTELNTQYYQQESAKLRQQIQMLQNSNRHLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERVQQANMVSGQELNAIQALANSRNFFSPNIMEPTGPVSFSHQDKKMLHLGASAGGVFQMKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGTADFGKKKILLLKGKARDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGGVIRSILLNNEARHGQSSSVAQSHQKIEILKSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAYRGEMKEDIHGSRTGDVATIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSGLFVYYIDKDVYCFPWDHDRNDVYVIQQIVASRQDYGSSNFQGDYLHSEDLMHILRRHHVKWRYALEAVGNSNRFRELDWKTCNCFVVYRWLQNTRFSG*

Homology

[Close]

BLAST of Chy9G157340 vs. ExPASy Swiss-Prot
Match: Q9FVW4 (Regulator of nonsense transcripts UPF3 OS=Arabidopsis thaliana OX=3702 GN=UPF3 PE=1 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.3e-109
Identity = 252/530 (47.55%), Postives = 325/530 (61.32%), Query Frame = 0


Query: 234 MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDF 293
           MK+PL++ KVV+RHLPPSLS SDL   I  RFA R+NW  +RPGK+S K+Q+Y+RAY+ F
Sbjct: 1   MKEPLQKKKVVVRHLPPSLSQSDLLSQIDPRFADRYNWVSFRPGKSSYKNQKYSRAYVSF 60

Query: 294 TRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYKDPDYLE 353
             PEDV+EFA FF+GHVFVNEKGAQ+KA+VEYAPSQRVP+ S KKD REG+I KDPDYLE
Sbjct: 61  KAPEDVYEFAAFFNGHVFVNEKGAQFKAIVEYAPSQRVPKPSDKKDPREGSISKDPDYLE 120

Query: 354 FLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQG-SSVP 413
           FLK+IA+P E+LPSAEIQLER+EAEQSGA+K  PIVTPLMEF+RQKRA   G QG S + 
Sbjct: 121 FLKVIAQPVENLPSAEIQLERREAEQSGASKAAPIVTPLMEFIRQKRATVMGPQGLSDIR 180

Query: 414 RKVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSG 473
           R  +R    S+ KP     KR  EKKKY+ K+S KN  R+  ++ +   + + + + SSG
Sbjct: 181 RGGRRTRVVSANKPSPRPSKRNSEKKKYVEKESSKNVPRKTTAD-VSSSKPDYRQSNSSG 240

Query: 474 -----------IGISDVG---TADFGKKKILLLKGKARDISHVSDDMLQLQSATSSGNSP 533
                      I  S  G   T D GKKKILLL+ K RD         +    T+   + 
Sbjct: 241 KELPGNETAAIIDSSPPGIALTMDSGKKKILLLRSKDRDNPDNPPPQPEQHIDTNLSRN- 300

Query: 534 ASASKHNHRREAGGGVIRSILLNNEARHGQSSSVAQSHQKIEILKSDNGKRPPRPTNARS 593
           ++ S+ N + + GG +I+ ILL N++R  QSS+  QS Q++E  +++N KRP RP N R+
Sbjct: 301 STDSRQNQKSDVGGRLIKGILLRNDSRPSQSSTFVQSEQRVEPSEAENYKRPSRPANTRA 360

Query: 594 GSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPR 653
           G                            K+ H  G+ SEKQE+R RNKDRPDR +WAP 
Sbjct: 361 G----------------------------KDYHTSGTISEKQERRTRNKDRPDRVMWAP- 420

Query: 654 SRSDASVSQLEESSVPQSSHLLSDSVEAYRGEMKEDIHGSRTGDVATIVSGRNSSVENGS 713
            R D S  Q      P SS           GE+K+ +   R+G+V     G   ++ENGS
Sbjct: 421 -RRDGSEDQ------PLSS-------AGNNGEVKDRMFSQRSGEVVNSSGGH--TLENGS 480

Query: 714 VRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGG---HEKQVWVQKSSSG 746
            RH  RR  G   K++  +   EGK S+RG  GG   HEKQ+W+QK SSG
Sbjct: 481 ARHSSRRVGGRNRKEEVVI--GEGKTSRRGSGGGPSSHEKQMWIQKPSSG 481

[Close]

BLAST of Chy9G157340 vs. ExPASy Swiss-Prot
Match: F6I457 (Agamous-like MADS-box protein AGL11 OS=Vitis vinifera OX=29760 GN=AGL11 PE=2 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.8e-93
Identity = 187/225 (83.11%), Postives = 203/225 (90.22%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGR+YEYSNN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRVYEYSNN 60

Query: 61  SIKTTIERYKKACSDSSATSSVTELNTQYYQQESAKLRQQIQMLQNSNRHLMGDSLSALT 120
           +IK+TI+RYKKA SDS+   S  E+N QYYQQESAKLRQQIQMLQNSNRHLMGDSL++LT
Sbjct: 61  NIKSTIDRYKKASSDSTNGGSTMEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLASLT 120

Query: 121 VKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERVQQA 180
           VKELKQLENRLERGITRIRSKKHE+LLAEIEYLQKREIELENE+V +RTKIAEVER+QQA
Sbjct: 121 VKELKQLENRLERGITRIRSKKHELLLAEIEYLQKREIELENESVYLRTKIAEVERLQQA 180

Query: 181 NMVSGQELNAIQALANSRNFFSPNIMEPTGPVSFSHQDKKMLHLG 226
           NMVS  E NAIQAL  SRNFF PN++E  G   +   DKK+LHLG
Sbjct: 181 NMVSTHEFNAIQALV-SRNFFQPNMIE-GGSTGYPLPDKKVLHLG 223

[Close]

BLAST of Chy9G157340 vs. ExPASy Swiss-Prot
Match: A0A217EJJ0 (Agamous-like MADS-box protein AGL11 OS=Vitis vinifera OX=29760 GN=AGL11 PE=3 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.4e-92
Identity = 186/225 (82.67%), Postives = 202/225 (89.78%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGR+YEYSNN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRVYEYSNN 60

Query: 61  SIKTTIERYKKACSDSSATSSVTELNTQYYQQESAKLRQQIQMLQNSNRHLMGDSLSALT 120
           +IK+TI+RYKKA SDS+   S  E+N QYYQQESAKLRQQIQMLQNSNRHLMGDSL++LT
Sbjct: 61  NIKSTIDRYKKASSDSTNGGSTMEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLASLT 120

Query: 121 VKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERVQQA 180
           VKELKQLENRLERGITRIRSKKHE+LLAEIEYLQKREIELENE+V +RTKIAEVER+QQA
Sbjct: 121 VKELKQLENRLERGITRIRSKKHELLLAEIEYLQKREIELENESVYLRTKIAEVERLQQA 180

Query: 181 NMVSGQELNAIQALANSRNFFSPNIMEPTGPVSFSHQDKKMLHLG 226
           NMVS  E NAIQAL  S NFF PN++E  G   +   DKK+LHLG
Sbjct: 181 NMVSTHEFNAIQALV-SLNFFQPNMIE-GGSAGYPLPDKKVLHLG 223

[Close]

BLAST of Chy9G157340 vs. ExPASy Swiss-Prot
Match: Q38836 (Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana OX=3702 GN=AGL11 PE=1 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.1e-84
Identity = 173/231 (74.89%), Postives = 202/231 (87.45%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
           MGRGKIEIKRIEN+TNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+RGRLYEY+NN
Sbjct: 1   MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60

Query: 61  SIKTTIERYKKACSDSSATSSVTELNTQYYQQESAKLRQQIQMLQNSNRHLMGDSLSALT 120
           +I++TIERYKKACSDS+ TS+V E+N  YYQQESAKLRQQIQ +QNSNR+LMGDSLS+L+
Sbjct: 61  NIRSTIERYKKACSDSTNTSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSLS 120

Query: 121 VKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERVQQA 180
           VKELKQ+ENRLE+ I+RIRSKKHE+LL EIE  QKREIEL+NEN+ +RTK+AEVER QQ 
Sbjct: 121 VKELKQVENRLEKAISRIRSKKHELLLVEIENAQKREIELDNENIYLRTKVAEVERYQQH 180

Query: 181 N--MVSGQELNAIQALANSRNFFSPNIMEPTGPV----SFSHQDKKMLHLG 226
           +  MVSG E+NAI+ALA SRN+F+ +IM          S+S  DKK+LHLG
Sbjct: 181 HHQMVSGSEINAIEALA-SRNYFAHSIMTAGSGSGNGGSYSDPDKKILHLG 230

[Close]

BLAST of Chy9G157340 vs. ExPASy Swiss-Prot
Match: Q93XH4 (Agamous-like MADS-box protein MADS1 OS=Vitis vinifera OX=29760 GN=MADS1 PE=2 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 5.6e-73
Identity = 149/226 (65.93%), Postives = 185/226 (81.86%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY+NN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 60

Query: 61  SIKTTIERYKKACSDSSATSSVTELNTQYYQQESAKLRQQIQMLQNSNRHLMGDSLSALT 120
           S++TTIERYKK CSDSS T SV+E N Q+YQQE++KLR+QI+ +QN NRH++G++LS+L 
Sbjct: 61  SVRTTIERYKKVCSDSSNTGSVSEANAQFYQQEASKLRRQIRDIQNLNRHILGEALSSLN 120

Query: 121 VKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERV-QQ 180
            KELK LE RLE+GI+RIRSKK+E+L AEIEY+QKREIEL+N N+ +R +IAE ER  QQ
Sbjct: 121 FKELKNLETRLEKGISRIRSKKNELLFAEIEYMQKREIELQNSNLFLRAQIAENERAQQQ 180

Query: 181 ANMVSGQELNAI-QALANSRNFFSPNIMEPTGPVSFSHQDKKMLHL 225
            N++ G +  ++ Q   +S+N    N+++P     +S  D+  L L
Sbjct: 181 MNLMPGSQYESVPQQPYDSQNLLPVNLLDPNH--HYSRHDQTALQL 224

[Close]

BLAST of Chy9G157340 vs. ExPASy TrEMBL
Match: A0A0A0KSY5 (Smg4_UPF3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G650630 PE=3 SV=1)

HSP 1 Score: 972.2 bits (2512), Expect = 1.4e-279
Identity = 506/512 (98.83%), Postives = 508/512 (99.22%), Query Frame = 0


Query: 234 MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDF 293
           MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDF
Sbjct: 1   MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDF 60

Query: 294 TRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYKDPDYLE 353
           TRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYKDPDYLE
Sbjct: 61  TRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYKDPDYLE 120

Query: 354 FLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPR 413
           FLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPR
Sbjct: 121 FLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPR 180

Query: 414 KVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGI 473
           KVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSS I
Sbjct: 181 KVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSAI 240

Query: 474 GISDVGTADFGKKKILLLKGKARDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG 533
           GISDVGTADFGKKKILLLKGK RDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG
Sbjct: 241 GISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG 300

Query: 534 VIRSILLNNEARHGQSSSVAQSHQKIEILKSDNGKRPPRPTNARSGSNDISSNEPNPSGS 593
           VIRSILLNNEARHGQSSSVAQSHQKI+IL SDNGKRPPRPTNARSGSNDISSNEPNPSGS
Sbjct: 301 VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGS 360

Query: 594 EGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSV 653
           EGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSV
Sbjct: 361 EGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSV 420

Query: 654 PQSSHLLSDSVEAYRGEMKEDIHGSRTGDVATIVSGRNSSVENGSVRHVGRRGAGHVMKD 713
           PQSSHLLSDSVEA+RGEMKEDIHGSRTGDV TIVSGRNSSVENGSVRHVGRRGAGHVMKD
Sbjct: 421 PQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKD 480

Query: 714 DGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSG 746
           DGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSG
Sbjct: 481 DGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSG 512

[Close]

BLAST of Chy9G157340 vs. ExPASy TrEMBL
Match: A0A5D3BML0 (Regulator of nonsense transcripts UPF3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00280 PE=3 SV=1)

HSP 1 Score: 970.3 bits (2507), Expect = 5.2e-279
Identity = 513/564 (90.96%), Postives = 517/564 (91.67%), Query Frame = 0


Query: 280 SQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKD 339
           +QKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKD
Sbjct: 48  TQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKD 107

Query: 340 GREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQK 399
           GREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQK
Sbjct: 108 GREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQK 167

Query: 400 RAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFIL 459
           RAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFIL
Sbjct: 168 RAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFIL 227

Query: 460 VPRREDQSATSSGIGISDVGTADFGKKKILLLKGKARDISHVSDDMLQLQSATSSGNSPA 519
           VPRR+DQSA SSGIGISDVGTADFGKKKILLLKGK RDISHVSDDMLQLQSATSSGNSPA
Sbjct: 228 VPRRDDQSANSSGIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPA 287

Query: 520 SASKHNHRREAGGGVIRSILLNNEARHGQSSSVAQSHQKIEILKSDNGKRPPRPTNARSG 579
           SASKHNHRREAGG VIRSILLNNEARHGQSSSVAQSHQKI+IL SDNGKRPPRPTNARSG
Sbjct: 288 SASKHNHRREAGGSVIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSG 347

Query: 580 SNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRS 639
           SNDISSNEPNPSGSEGDGKRA DNKFSKKELHGLGSASEKQ+KRIRNKDRPDRGVWAPRS
Sbjct: 348 SNDISSNEPNPSGSEGDGKRAPDNKFSKKELHGLGSASEKQDKRIRNKDRPDRGVWAPRS 407

Query: 640 RSDASVSQLEESSVPQSSHLLSDSVEAYRGEMKEDIHGSRTGDVATIVSGRNSSVENGSV 699
           RSDASVSQLEESSV QSSHLLSDSVEAYRGEMKEDIHGSRT DV TIVSGRNSSVENGSV
Sbjct: 408 RSDASVSQLEESSVSQSSHLLSDSVEAYRGEMKEDIHGSRTADVTTIVSGRNSSVENGSV 467

Query: 700 RHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSGLFVYYIDKDVYCFP 759
           RHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHE                         
Sbjct: 468 RHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHE------------------------- 527

Query: 760 WDHDRNDVYVIQQIVASRQDYGSSNFQGDYLHSEDLMHILRRHHVKWRYALEAVGNSNRF 819
                        IVASRQDYGSSNFQGDYLHSEDLMHILRRHHVKWRYALEAVGNSNRF
Sbjct: 528 -------------IVASRQDYGSSNFQGDYLHSEDLMHILRRHHVKWRYALEAVGNSNRF 573

Query: 820 RELDWKTCNCFVVYRWLQNTRFSG 844
           RELD KTCNCFVVYRWLQNTRFSG
Sbjct: 588 RELDCKTCNCFVVYRWLQNTRFSG 573

[Close]

BLAST of Chy9G157340 vs. ExPASy TrEMBL
Match: A0A1S3CB69 (regulator of nonsense transcripts UPF3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498712 PE=3 SV=1)

HSP 1 Score: 961.4 bits (2484), Expect = 2.4e-276
Identity = 501/512 (97.85%), Postives = 503/512 (98.24%), Query Frame = 0


Query: 234 MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDF 293
           MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDF
Sbjct: 1   MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDF 60

Query: 294 TRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYKDPDYLE 353
           TRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYKDPDYLE
Sbjct: 61  TRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYKDPDYLE 120

Query: 354 FLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPR 413
           FLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPR
Sbjct: 121 FLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPR 180

Query: 414 KVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGI 473
           KVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFILVPRR+DQSA SSGI
Sbjct: 181 KVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFILVPRRDDQSANSSGI 240

Query: 474 GISDVGTADFGKKKILLLKGKARDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG 533
           GISDVG ADFGKKKILLLKGK RDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGG 
Sbjct: 241 GISDVGAADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGS 300

Query: 534 VIRSILLNNEARHGQSSSVAQSHQKIEILKSDNGKRPPRPTNARSGSNDISSNEPNPSGS 593
           VIRSILLNNEARHGQSSSVAQSHQKI+IL SDNGKRPPRPTNARSGSNDISSNEPNPSGS
Sbjct: 301 VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGS 360

Query: 594 EGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSV 653
           EGDGKRA DNKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSV
Sbjct: 361 EGDGKRAPDNKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSV 420

Query: 654 PQSSHLLSDSVEAYRGEMKEDIHGSRTGDVATIVSGRNSSVENGSVRHVGRRGAGHVMKD 713
            QSSHLLSDSVEAYRGEMKEDIHGSRT DV TIVSGRNSSVENGSVRHVGRRGAGHVMKD
Sbjct: 421 SQSSHLLSDSVEAYRGEMKEDIHGSRTADVTTIVSGRNSSVENGSVRHVGRRGAGHVMKD 480

Query: 714 DGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSG 746
           DGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSG
Sbjct: 481 DGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSG 512

[Close]

BLAST of Chy9G157340 vs. ExPASy TrEMBL
Match: A0A5A7TD91 (Regulator of nonsense transcripts UPF3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G00280 PE=3 SV=1)

HSP 1 Score: 954.5 bits (2466), Expect = 2.9e-274
Identity = 513/572 (89.69%), Postives = 517/572 (90.38%), Query Frame = 0


Query: 280 SQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKD 339
           +QKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKD
Sbjct: 48  TQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKD 107

Query: 340 GREGTIYK-DPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQ 399
           GREGTIYK DPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQ
Sbjct: 108 GREGTIYKADPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQ 167

Query: 400 KRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKK------YILKDSVKNTNRR 459
           KRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKK      YILKDSVKNTNRR
Sbjct: 168 KRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKACATFNYILKDSVKNTNRR 227

Query: 460 DKSNFILVPRREDQSATSSGIGISDVGTADFGKKKILLLKGKARDISHVSDDMLQLQSAT 519
           DKSNFILVPRR+DQSA SSGIGISDVGTADFGKKKILLLKGK RDISHVSDDMLQLQSAT
Sbjct: 228 DKSNFILVPRRDDQSANSSGIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSAT 287

Query: 520 SSGNSPASASKHNHRREAGGGVIRSILLNNEARHGQSSSVAQSHQKIEILKSDNGKRPPR 579
           SSGNSPASASKHNHRREAGG VIRSILLNNEARHGQSSSVAQSHQKI+IL SDNGKRPPR
Sbjct: 288 SSGNSPASASKHNHRREAGGSVIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPR 347

Query: 580 PTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDR 639
           PTNARSGSNDISSNEPNPSGSEGDGKRA DNKFSKKELHGLGSASEKQ+KRIRNKDRPDR
Sbjct: 348 PTNARSGSNDISSNEPNPSGSEGDGKRAPDNKFSKKELHGLGSASEKQDKRIRNKDRPDR 407

Query: 640 GVWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAYRGEMKEDIHGSRTGDVATIVSGRNS 699
           GVWAPRSRSDASVSQLEESSV QSSHLLSDSVEAYRGEMKEDIHGSRT DV TIVSGRNS
Sbjct: 408 GVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAYRGEMKEDIHGSRTADVTTIVSGRNS 467

Query: 700 SVENG-SVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSGLFVYYI 759
           SVENG SVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHE                 
Sbjct: 468 SVENGCSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHE----------------- 527

Query: 760 DKDVYCFPWDHDRNDVYVIQQIVASRQDYGSSNFQGDYLHSEDLMHILRRHHVKWRYALE 819
                                IVASRQDYGSSNFQGDYLHSEDLMHILRRHHVKWRYALE
Sbjct: 528 ---------------------IVASRQDYGSSNFQGDYLHSEDLMHILRRHHVKWRYALE 581

Query: 820 AVGNSNRFRELDWKTCNCFVVYRWLQNTRFSG 844
           AVGNSNRFRELD KTCNCFVVYRWLQNTRFSG
Sbjct: 588 AVGNSNRFRELDCKTCNCFVVYRWLQNTRFSG 581

[Close]

BLAST of Chy9G157340 vs. ExPASy TrEMBL
Match: A0A1S3CBX5 (regulator of nonsense transcripts UPF3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498712 PE=3 SV=1)

HSP 1 Score: 941.4 bits (2432), Expect = 2.6e-270
Identity = 494/512 (96.48%), Postives = 496/512 (96.88%), Query Frame = 0


Query: 234 MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDF 293
           MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDF
Sbjct: 1   MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDF 60

Query: 294 TRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYKDPDYLE 353
           TRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYKDPDYLE
Sbjct: 61  TRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYKDPDYLE 120

Query: 354 FLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPR 413
           FLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPR
Sbjct: 121 FLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPR 180

Query: 414 KVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGI 473
           KVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFILVPRR+DQSA SSGI
Sbjct: 181 KVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFILVPRRDDQSANSSGI 240

Query: 474 GISDVGTADFGKKKILLLKGKARDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG 533
           GISDVG ADFGKKKILLLKGK RDISH       LQSATSSGNSPASASKHNHRREAGG 
Sbjct: 241 GISDVGAADFGKKKILLLKGKERDISH-------LQSATSSGNSPASASKHNHRREAGGS 300

Query: 534 VIRSILLNNEARHGQSSSVAQSHQKIEILKSDNGKRPPRPTNARSGSNDISSNEPNPSGS 593
           VIRSILLNNEARHGQSSSVAQSHQKI+IL SDNGKRPPRPTNARSGSNDISSNEPNPSGS
Sbjct: 301 VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGS 360

Query: 594 EGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSV 653
           EGDGKRA DNKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSV
Sbjct: 361 EGDGKRAPDNKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSV 420

Query: 654 PQSSHLLSDSVEAYRGEMKEDIHGSRTGDVATIVSGRNSSVENGSVRHVGRRGAGHVMKD 713
            QSSHLLSDSVEAYRGEMKEDIHGSRT DV TIVSGRNSSVENGSVRHVGRRGAGHVMKD
Sbjct: 421 SQSSHLLSDSVEAYRGEMKEDIHGSRTADVTTIVSGRNSSVENGSVRHVGRRGAGHVMKD 480

Query: 714 DGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSG 746
           DGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSG
Sbjct: 481 DGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSG 505

[Close]

BLAST of Chy9G157340 vs. NCBI nr
Match: KAG7037154.1 (Regulator of nonsense transcripts UPF3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1128 bits (2918), Expect = 0.0
Identity = 627/835 (75.09%), Postives = 655/835 (78.44%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60

Query: 61  SIKTTIERYKKACSDSSATSSVTELNTQYYQQESAKLRQQIQMLQNSNRHLMGDSLSALT 120
           S                                            N  RHLMGDSLSALT
Sbjct: 61  S--------------------------------------------NLVRHLMGDSLSALT 120

Query: 121 VKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERVQQA 180
           VKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVER+ QA
Sbjct: 121 VKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLHQA 180

Query: 181 NMVSGQELNAIQALANSRNFFSPNIMEPTGPVSFSHQDKKMLHLGASAGGVFQMKDPLER 240
           NM SGQELNAIQALA SRNFFSPNIME                     GG   MKDPLER
Sbjct: 181 NMESGQELNAIQALA-SRNFFSPNIME---------------------GGA--MKDPLER 240

Query: 241 TKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVF 300
           TKVVIRHLPPSL HSDLFHHIHDRFAGR+N  YYRPGKTSQK+QRYARAYIDFT PEDVF
Sbjct: 241 TKVVIRHLPPSLPHSDLFHHIHDRFAGRYNSCYYRPGKTSQKEQRYARAYIDFTIPEDVF 300

Query: 301 EFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYKDPDYLEFLKLIAK 360
           EFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSS+KKDGREGTIYKDPDYLEFLKLIAK
Sbjct: 301 EFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSSKKDGREGTIYKDPDYLEFLKLIAK 360

Query: 361 PAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGA 420
           P EHLPSAEIQLERKEAEQSG AK+TPIVTPLMEFVRQKRAVESGTQ             
Sbjct: 361 PTEHLPSAEIQLERKEAEQSGVAKDTPIVTPLMEFVRQKRAVESGTQ------------- 420

Query: 421 ASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGT 480
                              YILKDS KNTNRRDKSNFILVPRREDQSATSSGIGISDVGT
Sbjct: 421 -------------------YILKDSGKNTNRRDKSNFILVPRREDQSATSSGIGISDVGT 480

Query: 481 ADFGKKKILLLKGKARDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGGVIRSILL 540
           AD GKKKILLLKGK RD+SH++D MLQ QSATSSGNSPA+A+K N RREAGG +IRSILL
Sbjct: 481 ADSGKKKILLLKGKGRDVSHIADGMLQFQSATSSGNSPANATKQNQRREAGGSMIRSILL 540

Query: 541 NNEARHGQSSSVAQSHQKIEILKSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRA 600
           NN+ARHGQSSSVAQSHQKI+IL SDNGKRPPRP N+RSGSND+SSN+PNPSGSEGDGKR 
Sbjct: 541 NNDARHGQSSSVAQSHQKIQILNSDNGKRPPRPINSRSGSNDMSSNDPNPSGSEGDGKRG 600

Query: 601 SDNKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSVPQSSHLL 660
            +NKF+KKE HGLG+ASEKQEKRIRNKDRPDRGVWAPR RSDASVSQL+ESSV QS+HLL
Sbjct: 601 MENKFNKKEHHGLGNASEKQEKRIRNKDRPDRGVWAPRGRSDASVSQLDESSVSQSTHLL 660

Query: 661 SDSVEAYRGEMKEDIHGSRTGDVATIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPN 720
           SDSVEAYRGEMK+D+HGSRTGDV T VSGR+SSVENG VRHVGRRGA H+MKDDGSLNPN
Sbjct: 661 SDSVEAYRGEMKDDVHGSRTGDVTTTVSGRSSSVENGLVRHVGRRGAVHIMKDDGSLNPN 710

Query: 721 EGKPSKRGVAGGHEKQVWVQKSSSGLFVYYIDKDVYCFPWDHDRNDVYVIQQIVASRQDY 780
           EGKPSKRGVAGGHEKQVWVQKSSS       D  +    W                +   
Sbjct: 721 EGKPSKRGVAGGHEKQVWVQKSSS-------DNGIQTGLW--------------FLKLPG 710

Query: 781 GSSNFQGDYLHSEDLMHILRRHHVKWRYALEAVGNSNRFRELDWKTCNCFVVYRW 835
           G S F    L  +        HHVKWRYALEAVGNSNRFRELD K CNCFVVYRW
Sbjct: 781 GLSPF----LRIKKCTSSEGIHHVKWRYALEAVGNSNRFRELDCKICNCFVVYRW 710

[Close]

BLAST of Chy9G157340 vs. NCBI nr
Match: TYK00427.1 (regulator of nonsense transcripts UPF3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 972 bits (2513), Expect = 0.0
Identity = 513/564 (90.96%), Postives = 517/564 (91.67%), Query Frame = 0


Query: 280 SQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKD 339
           +QKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKD
Sbjct: 48  TQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKD 107

Query: 340 GREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQK 399
           GREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQK
Sbjct: 108 GREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQK 167

Query: 400 RAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFIL 459
           RAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFIL
Sbjct: 168 RAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFIL 227

Query: 460 VPRREDQSATSSGIGISDVGTADFGKKKILLLKGKARDISHVSDDMLQLQSATSSGNSPA 519
           VPRR+DQSA SSGIGISDVGTADFGKKKILLLKGK RDISHVSDDMLQLQSATSSGNSPA
Sbjct: 228 VPRRDDQSANSSGIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPA 287

Query: 520 SASKHNHRREAGGGVIRSILLNNEARHGQSSSVAQSHQKIEILKSDNGKRPPRPTNARSG 579
           SASKHNHRREAGG VIRSILLNNEARHGQSSSVAQSHQKI+IL SDNGKRPPRPTNARSG
Sbjct: 288 SASKHNHRREAGGSVIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSG 347

Query: 580 SNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRS 639
           SNDISSNEPNPSGSEGDGKRA DNKFSKKELHGLGSASEKQ+KRIRNKDRPDRGVWAPRS
Sbjct: 348 SNDISSNEPNPSGSEGDGKRAPDNKFSKKELHGLGSASEKQDKRIRNKDRPDRGVWAPRS 407

Query: 640 RSDASVSQLEESSVPQSSHLLSDSVEAYRGEMKEDIHGSRTGDVATIVSGRNSSVENGSV 699
           RSDASVSQLEESSV QSSHLLSDSVEAYRGEMKEDIHGSRT DV TIVSGRNSSVENGSV
Sbjct: 408 RSDASVSQLEESSVSQSSHLLSDSVEAYRGEMKEDIHGSRTADVTTIVSGRNSSVENGSV 467

Query: 700 RHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSGLFVYYIDKDVYCFP 759
           RHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHE                         
Sbjct: 468 RHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHE------------------------- 527

Query: 760 WDHDRNDVYVIQQIVASRQDYGSSNFQGDYLHSEDLMHILRRHHVKWRYALEAVGNSNRF 819
                        IVASRQDYGSSNFQGDYLHSEDLMHILRRHHVKWRYALEAVGNSNRF
Sbjct: 528 -------------IVASRQDYGSSNFQGDYLHSEDLMHILRRHHVKWRYALEAVGNSNRF 573

Query: 820 RELDWKTCNCFVVYRWLQNTRFSG 843
           RELD KTCNCFVVYRWLQNTRFSG
Sbjct: 588 RELDCKTCNCFVVYRWLQNTRFSG 573

[Close]

BLAST of Chy9G157340 vs. NCBI nr
Match: XP_011656113.1 (regulator of nonsense transcripts UPF3 isoform X1 [Cucumis sativus])

HSP 1 Score: 972 bits (2512), Expect = 0.0
Identity = 506/512 (98.83%), Postives = 508/512 (99.22%), Query Frame = 0


Query: 234 MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDF 293
           MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDF
Sbjct: 1   MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDF 60

Query: 294 TRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYKDPDYLE 353
           TRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYKDPDYLE
Sbjct: 61  TRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYKDPDYLE 120

Query: 354 FLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPR 413
           FLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPR
Sbjct: 121 FLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPR 180

Query: 414 KVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGI 473
           KVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSS I
Sbjct: 181 KVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSAI 240

Query: 474 GISDVGTADFGKKKILLLKGKARDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG 533
           GISDVGTADFGKKKILLLKGK RDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG
Sbjct: 241 GISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG 300

Query: 534 VIRSILLNNEARHGQSSSVAQSHQKIEILKSDNGKRPPRPTNARSGSNDISSNEPNPSGS 593
           VIRSILLNNEARHGQSSSVAQSHQKI+IL SDNGKRPPRPTNARSGSNDISSNEPNPSGS
Sbjct: 301 VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGS 360

Query: 594 EGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSV 653
           EGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSV
Sbjct: 361 EGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSV 420

Query: 654 PQSSHLLSDSVEAYRGEMKEDIHGSRTGDVATIVSGRNSSVENGSVRHVGRRGAGHVMKD 713
           PQSSHLLSDSVEA+RGEMKEDIHGSRTGDV TIVSGRNSSVENGSVRHVGRRGAGHVMKD
Sbjct: 421 PQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKD 480

Query: 714 DGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSG 745
           DGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSG
Sbjct: 481 DGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSG 512

[Close]

BLAST of Chy9G157340 vs. NCBI nr
Match: XP_008459659.1 (PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Cucumis melo])

HSP 1 Score: 961 bits (2484), Expect = 0.0
Identity = 501/512 (97.85%), Postives = 503/512 (98.24%), Query Frame = 0


Query: 234 MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDF 293
           MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDF
Sbjct: 1   MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDF 60

Query: 294 TRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYKDPDYLE 353
           TRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYKDPDYLE
Sbjct: 61  TRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYKDPDYLE 120

Query: 354 FLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPR 413
           FLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPR
Sbjct: 121 FLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPR 180

Query: 414 KVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGI 473
           KVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFILVPRR+DQSA SSGI
Sbjct: 181 KVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFILVPRRDDQSANSSGI 240

Query: 474 GISDVGTADFGKKKILLLKGKARDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG 533
           GISDVG ADFGKKKILLLKGK RDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGG 
Sbjct: 241 GISDVGAADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGS 300

Query: 534 VIRSILLNNEARHGQSSSVAQSHQKIEILKSDNGKRPPRPTNARSGSNDISSNEPNPSGS 593
           VIRSILLNNEARHGQSSSVAQSHQKI+IL SDNGKRPPRPTNARSGSNDISSNEPNPSGS
Sbjct: 301 VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGS 360

Query: 594 EGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSV 653
           EGDGKRA DNKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSV
Sbjct: 361 EGDGKRAPDNKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSV 420

Query: 654 PQSSHLLSDSVEAYRGEMKEDIHGSRTGDVATIVSGRNSSVENGSVRHVGRRGAGHVMKD 713
            QSSHLLSDSVEAYRGEMKEDIHGSRT DV TIVSGRNSSVENGSVRHVGRRGAGHVMKD
Sbjct: 421 SQSSHLLSDSVEAYRGEMKEDIHGSRTADVTTIVSGRNSSVENGSVRHVGRRGAGHVMKD 480

Query: 714 DGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSG 745
           DGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSG
Sbjct: 481 DGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSG 512

[Close]

BLAST of Chy9G157340 vs. NCBI nr
Match: KAA0039239.1 (regulator of nonsense transcripts UPF3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 956 bits (2472), Expect = 0.0
Identity = 513/572 (89.69%), Postives = 517/572 (90.38%), Query Frame = 0


Query: 280 SQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKD 339
           +QKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKD
Sbjct: 48  TQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKD 107

Query: 340 GREGTIYK-DPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQ 399
           GREGTIYK DPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQ
Sbjct: 108 GREGTIYKADPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQ 167

Query: 400 KRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKK------YILKDSVKNTNRR 459
           KRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKK      YILKDSVKNTNRR
Sbjct: 168 KRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKACATFNYILKDSVKNTNRR 227

Query: 460 DKSNFILVPRREDQSATSSGIGISDVGTADFGKKKILLLKGKARDISHVSDDMLQLQSAT 519
           DKSNFILVPRR+DQSA SSGIGISDVGTADFGKKKILLLKGK RDISHVSDDMLQLQSAT
Sbjct: 228 DKSNFILVPRRDDQSANSSGIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSAT 287

Query: 520 SSGNSPASASKHNHRREAGGGVIRSILLNNEARHGQSSSVAQSHQKIEILKSDNGKRPPR 579
           SSGNSPASASKHNHRREAGG VIRSILLNNEARHGQSSSVAQSHQKI+IL SDNGKRPPR
Sbjct: 288 SSGNSPASASKHNHRREAGGSVIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPR 347

Query: 580 PTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDR 639
           PTNARSGSNDISSNEPNPSGSEGDGKRA DNKFSKKELHGLGSASEKQ+KRIRNKDRPDR
Sbjct: 348 PTNARSGSNDISSNEPNPSGSEGDGKRAPDNKFSKKELHGLGSASEKQDKRIRNKDRPDR 407

Query: 640 GVWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAYRGEMKEDIHGSRTGDVATIVSGRNS 699
           GVWAPRSRSDASVSQLEESSV QSSHLLSDSVEAYRGEMKEDIHGSRT DV TIVSGRNS
Sbjct: 408 GVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAYRGEMKEDIHGSRTADVTTIVSGRNS 467

Query: 700 SVENG-SVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSGLFVYYI 759
           SVENG SVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHE                 
Sbjct: 468 SVENGCSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHE----------------- 527

Query: 760 DKDVYCFPWDHDRNDVYVIQQIVASRQDYGSSNFQGDYLHSEDLMHILRRHHVKWRYALE 819
                                IVASRQDYGSSNFQGDYLHSEDLMHILRRHHVKWRYALE
Sbjct: 528 ---------------------IVASRQDYGSSNFQGDYLHSEDLMHILRRHHVKWRYALE 581

Query: 820 AVGNSNRFRELDWKTCNCFVVYRWLQNTRFSG 843
           AVGNSNRFRELD KTCNCFVVYRWLQNTRFSG
Sbjct: 588 AVGNSNRFRELDCKTCNCFVVYRWLQNTRFSG 581

[Close]

BLAST of Chy9G157340 vs. TAIR 10
Match: AT1G33980.1 (Smg-4/UPF3 family protein )

HSP 1 Score: 399.1 bits (1024), Expect = 9.1e-111
Identity = 252/530 (47.55%), Postives = 325/530 (61.32%), Query Frame = 0


Query: 234 MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDF 293
           MK+PL++ KVV+RHLPPSLS SDL   I  RFA R+NW  +RPGK+S K+Q+Y+RAY+ F
Sbjct: 1   MKEPLQKKKVVVRHLPPSLSQSDLLSQIDPRFADRYNWVSFRPGKSSYKNQKYSRAYVSF 60

Query: 294 TRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYKDPDYLE 353
             PEDV+EFA FF+GHVFVNEKGAQ+KA+VEYAPSQRVP+ S KKD REG+I KDPDYLE
Sbjct: 61  KAPEDVYEFAAFFNGHVFVNEKGAQFKAIVEYAPSQRVPKPSDKKDPREGSISKDPDYLE 120

Query: 354 FLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQG-SSVP 413
           FLK+IA+P E+LPSAEIQLER+EAEQSGA+K  PIVTPLMEF+RQKRA   G QG S + 
Sbjct: 121 FLKVIAQPVENLPSAEIQLERREAEQSGASKAAPIVTPLMEFIRQKRATVMGPQGLSDIR 180

Query: 414 RKVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSG 473
           R  +R    S+ KP     KR  EKKKY+ K+S KN  R+  ++ +   + + + + SSG
Sbjct: 181 RGGRRTRVVSANKPSPRPSKRNSEKKKYVEKESSKNVPRKTTAD-VSSSKPDYRQSNSSG 240

Query: 474 -----------IGISDVG---TADFGKKKILLLKGKARDISHVSDDMLQLQSATSSGNSP 533
                      I  S  G   T D GKKKILLL+ K RD         +    T+   + 
Sbjct: 241 KELPGNETAAIIDSSPPGIALTMDSGKKKILLLRSKDRDNPDNPPPQPEQHIDTNLSRN- 300

Query: 534 ASASKHNHRREAGGGVIRSILLNNEARHGQSSSVAQSHQKIEILKSDNGKRPPRPTNARS 593
           ++ S+ N + + GG +I+ ILL N++R  QSS+  QS Q++E  +++N KRP RP N R+
Sbjct: 301 STDSRQNQKSDVGGRLIKGILLRNDSRPSQSSTFVQSEQRVEPSEAENYKRPSRPANTRA 360

Query: 594 GSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPR 653
           G                            K+ H  G+ SEKQE+R RNKDRPDR +WAP 
Sbjct: 361 G----------------------------KDYHTSGTISEKQERRTRNKDRPDRVMWAP- 420

Query: 654 SRSDASVSQLEESSVPQSSHLLSDSVEAYRGEMKEDIHGSRTGDVATIVSGRNSSVENGS 713
            R D S  Q      P SS           GE+K+ +   R+G+V     G   ++ENGS
Sbjct: 421 -RRDGSEDQ------PLSS-------AGNNGEVKDRMFSQRSGEVVNSSGGH--TLENGS 480

Query: 714 VRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGG---HEKQVWVQKSSSG 746
            RH  RR  G   K++  +   EGK S+RG  GG   HEKQ+W+QK SSG
Sbjct: 481 ARHSSRRVGGRNRKEEVVI--GEGKTSRRGSGGGPSSHEKQMWIQKPSSG 481

[Close]

BLAST of Chy9G157340 vs. TAIR 10
Match: AT1G33980.2 (Smg-4/UPF3 family protein )

HSP 1 Score: 392.5 bits (1007), Expect = 8.5e-109
Identity = 251/532 (47.18%), Postives = 324/532 (60.90%), Query Frame = 0


Query: 234 MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKT--SQKDQRYARAYI 293
           MK+PL++ KVV+RHLPPSLS SDL   I  RFA R+NW  +RPGK+    K+Q+Y+RAY+
Sbjct: 1   MKEPLQKKKVVVRHLPPSLSQSDLLSQIDPRFADRYNWVSFRPGKSRLGYKNQKYSRAYV 60

Query: 294 DFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYKDPDY 353
            F  PEDV+EFA FF+GHVFVNEKGAQ+KA+VEYAPSQRVP+ S KKD REG+I KDPDY
Sbjct: 61  SFKAPEDVYEFAAFFNGHVFVNEKGAQFKAIVEYAPSQRVPKPSDKKDPREGSISKDPDY 120

Query: 354 LEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQG-SS 413
           LEFLK+IA+P E+LPSAEIQLER+EAEQSGA+K  PIVTPLMEF+RQKRA   G QG S 
Sbjct: 121 LEFLKVIAQPVENLPSAEIQLERREAEQSGASKAAPIVTPLMEFIRQKRATVMGPQGLSD 180

Query: 414 VPRKVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATS 473
           + R  +R    S+ KP     KR  EKKKY+ K+S KN  R+  ++ +   + + + + S
Sbjct: 181 IRRGGRRTRVVSANKPSPRPSKRNSEKKKYVEKESSKNVPRKTTAD-VSSSKPDYRQSNS 240

Query: 474 SG-----------IGISDVG---TADFGKKKILLLKGKARDISHVSDDMLQLQSATSSGN 533
           SG           I  S  G   T D GKKKILLL+ K RD         +    T+   
Sbjct: 241 SGKELPGNETAAIIDSSPPGIALTMDSGKKKILLLRSKDRDNPDNPPPQPEQHIDTNLSR 300

Query: 534 SPASASKHNHRREAGGGVIRSILLNNEARHGQSSSVAQSHQKIEILKSDNGKRPPRPTNA 593
           + ++ S+ N + + GG +I+ ILL N++R  QSS+  QS Q++E  +++N KRP RP N 
Sbjct: 301 N-STDSRQNQKSDVGGRLIKGILLRNDSRPSQSSTFVQSEQRVEPSEAENYKRPSRPANT 360

Query: 594 RSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWA 653
           R+G                            K+ H  G+ SEKQE+R RNKDRPDR +WA
Sbjct: 361 RAG----------------------------KDYHTSGTISEKQERRTRNKDRPDRVMWA 420

Query: 654 PRSRSDASVSQLEESSVPQSSHLLSDSVEAYRGEMKEDIHGSRTGDVATIVSGRNSSVEN 713
           P  R D S  Q      P SS           GE+K+ +   R+G+V     G   ++EN
Sbjct: 421 P--RRDGSEDQ------PLSS-------AGNNGEVKDRMFSQRSGEVVNSSGGH--TLEN 480

Query: 714 GSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGG---HEKQVWVQKSSSG 746
           GS RH  RR  G   K++  +   EGK S+RG  GG   HEKQ+W+QK SSG
Sbjct: 481 GSARHSSRRVGGRNRKEEVVI--GEGKTSRRGSGGGPSSHEKQMWIQKPSSG 483

[Close]

BLAST of Chy9G157340 vs. TAIR 10
Match: AT4G09960.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 316.2 bits (809), Expect = 7.8e-86
Identity = 173/231 (74.89%), Postives = 202/231 (87.45%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
           MGRGKIEIKRIEN+TNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+RGRLYEY+NN
Sbjct: 1   MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60

Query: 61  SIKTTIERYKKACSDSSATSSVTELNTQYYQQESAKLRQQIQMLQNSNRHLMGDSLSALT 120
           +I++TIERYKKACSDS+ TS+V E+N  YYQQESAKLRQQIQ +QNSNR+LMGDSLS+L+
Sbjct: 61  NIRSTIERYKKACSDSTNTSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSLS 120

Query: 121 VKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERVQQA 180
           VKELKQ+ENRLE+ I+RIRSKKHE+LL EIE  QKREIEL+NEN+ +RTK+AEVER QQ 
Sbjct: 121 VKELKQVENRLEKAISRIRSKKHELLLVEIENAQKREIELDNENIYLRTKVAEVERYQQH 180

Query: 181 N--MVSGQELNAIQALANSRNFFSPNIMEPTGPV----SFSHQDKKMLHLG 226
           +  MVSG E+NAI+ALA SRN+F+ +IM          S+S  DKK+LHLG
Sbjct: 181 HHQMVSGSEINAIEALA-SRNYFAHSIMTAGSGSGNGGSYSDPDKKILHLG 230

[Close]

BLAST of Chy9G157340 vs. TAIR 10
Match: AT4G09960.3 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 316.2 bits (809), Expect = 7.8e-86
Identity = 173/231 (74.89%), Postives = 202/231 (87.45%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
           MGRGKIEIKRIEN+TNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+RGRLYEY+NN
Sbjct: 27  MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 86

Query: 61  SIKTTIERYKKACSDSSATSSVTELNTQYYQQESAKLRQQIQMLQNSNRHLMGDSLSALT 120
           +I++TIERYKKACSDS+ TS+V E+N  YYQQESAKLRQQIQ +QNSNR+LMGDSLS+L+
Sbjct: 87  NIRSTIERYKKACSDSTNTSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSLS 146

Query: 121 VKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERVQQA 180
           VKELKQ+ENRLE+ I+RIRSKKHE+LL EIE  QKREIEL+NEN+ +RTK+AEVER QQ 
Sbjct: 147 VKELKQVENRLEKAISRIRSKKHELLLVEIENAQKREIELDNENIYLRTKVAEVERYQQH 206

Query: 181 N--MVSGQELNAIQALANSRNFFSPNIMEPTGPV----SFSHQDKKMLHLG 226
           +  MVSG E+NAI+ALA SRN+F+ +IM          S+S  DKK+LHLG
Sbjct: 207 HHQMVSGSEINAIEALA-SRNYFAHSIMTAGSGSGNGGSYSDPDKKILHLG 256

[Close]

BLAST of Chy9G157340 vs. TAIR 10
Match: AT4G09960.4 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 310.5 bits (794), Expect = 4.3e-84
Identity = 173/235 (73.62%), Postives = 202/235 (85.96%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
           MGRGKIEIKRIEN+TNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+RGRLYEY+NN
Sbjct: 1   MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60

Query: 61  SIKTTIERYKKACSDSSATSSVTELNTQYYQQESAKLRQQIQMLQNSNRHLMGDSLSALT 120
           +I++TIERYKKACSDS+ TS+V E+N  YYQQESAKLRQQIQ +QNSNR+LMGDSLS+L+
Sbjct: 61  NIRSTIERYKKACSDSTNTSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSLS 120

Query: 121 VKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKR----EIELENENVCIRTKIAEVER 180
           VKELKQ+ENRLE+ I+RIRSKKHE+LL EIE  QKR    EIEL+NEN+ +RTK+AEVER
Sbjct: 121 VKELKQVENRLEKAISRIRSKKHELLLVEIENAQKRLILQEIELDNENIYLRTKVAEVER 180

Query: 181 VQQAN--MVSGQELNAIQALANSRNFFSPNIMEPTGPV----SFSHQDKKMLHLG 226
            QQ +  MVSG E+NAI+ALA SRN+F+ +IM          S+S  DKK+LHLG
Sbjct: 181 YQQHHHQMVSGSEINAIEALA-SRNYFAHSIMTAGSGSGNGGSYSDPDKKILHLG 234

The following BLAST results are available for this feature:

BLAST of Chy9G157340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FVW4	1.3e-109	47.55	Regulator of nonsense transcripts UPF3 OS=Arabidopsis thaliana OX=3702 GN=UPF3 P...	[more]
F6I457	3.8e-93	83.11	Agamous-like MADS-box protein AGL11 OS=Vitis vinifera OX=29760 GN=AGL11 PE=2 SV=...	[more]
A0A217EJJ0	2.4e-92	82.67	Agamous-like MADS-box protein AGL11 OS=Vitis vinifera OX=29760 GN=AGL11 PE=3 SV=...	[more]
Q38836	1.1e-84	74.89	Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana OX=3702 GN=AGL11 PE=...	[more]
Q93XH4	5.6e-73	65.93	Agamous-like MADS-box protein MADS1 OS=Vitis vinifera OX=29760 GN=MADS1 PE=2 SV=...	[more]

BLAST of Chy9G157340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSY5	1.4e-279	98.83	Smg4_UPF3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G650630 P...	[more]
A0A5D3BML0	5.2e-279	90.96	Regulator of nonsense transcripts UPF3 isoform X1 OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3CB69	2.4e-276	97.85	regulator of nonsense transcripts UPF3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A5A7TD91	2.9e-274	89.69	Regulator of nonsense transcripts UPF3 isoform X1 OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3CBX5	2.6e-270	96.48	regulator of nonsense transcripts UPF3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC...	[more]

BLAST of Chy9G157340 vs. NCBI nr


Match Name	Identity	Description
KAG7037154.1	75.09	Regulator of nonsense transcripts UPF3, partial [Cucurbita argyrosperma subsp. a...	[more]
TYK00427.1	90.96	regulator of nonsense transcripts UPF3 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_011656113.1	98.83	regulator of nonsense transcripts UPF3 isoform X1 [Cucumis sativus]	[more]
XP_008459659.1	97.85	PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Cucumis melo]	[more]
KAA0039239.1	89.69	regulator of nonsense transcripts UPF3 isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of Chy9G157340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G33980.1	9.1e-111	47.55	Smg-4/UPF3 family protein	[more]
AT1G33980.2	8.5e-109	47.18	Smg-4/UPF3 family protein	[more]
AT4G09960.1	7.8e-86	74.89	K-box region and MADS-box transcription factor family protein	[more]
AT4G09960.3	7.8e-86	74.89	K-box region and MADS-box transcription factor family protein	[more]
AT4G09960.4	4.3e-84	73.62	K-box region and MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 124..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 401..435
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 707..734
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 640..660
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 597..636
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 509..529
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 571..592
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 561..660
None	No IPR available	PANTHER	PTHR13112:SF5	REGULATOR OF NONSENSE TRANSCRIPTS UPF3	coord: 234..745
None	No IPR available	CDD	cd12455	RRM_like_Smg4_UPF3	coord: 242..327 e-value: 7.54316E-33 score: 120.05
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 3..23 score: 72.99 coord: 38..59 score: 64.74 coord: 23..38 score: 86.34
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 1.3E-42 score: 157.5
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 e-value: 7.8E-26 score: 89.4
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 34.089954
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..104 e-value: 1.2E-27 score: 97.8
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..77
IPR005120	UPF3 domain	PFAM	PF03467	Smg4_UPF3	coord: 239..401 e-value: 1.4E-50 score: 171.7
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 86..171 e-value: 9.2E-26 score: 89.9
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 87..177 score: 15.511216
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 234..330 e-value: 1.5E-31 score: 110.6
IPR039722	Nonsense-mediated mRNA decay protein 3	PANTHER	PTHR13112	UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN	coord: 234..745
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..76 e-value: 5.53643E-43 score: 148.469
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 241..330

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy9G157340.1	Chy9G157340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0045727	positive regulation of translation
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003676	nucleic acid binding