Chy8G150620 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGGCAGCTCCACCAAATGCAATCAAGCTCGACGGTCAAATGCAGCTGATGCCGGAGCCACCCGCGGAGCCATCCCACTCCACTCGTCACTCCGTCCAGACGCTCGTGGTGCTGCTGGCGGCAATCACCATTTTAGGTGTCATTGCTCGAGTTTTCGCTCGCCTTTGCGGTGGAGGAACTGATGACAACATTGAAGGTTGGGTTCAAACAAGGTGCAACAGCTGCATTGACGGCAGCAGCCCCCCTGCTCCGCCGCTCCCGCCGTCGGAAGTGGCGGAGGAGGAGAAGAAGTGAGATCAGGTGGGTAGTATAGTAATTTCCAGGTTTTTTTCTTTAAGAAATTGGAAATTTTGTGTGATTGTATCGTAATGTAATGGAGCAGAAGGATTTCATGTGCTTTGCTTTCCTTCGTTTTCCCATTCTTCTTCTATTATTTTCCCTTTAAAATTTACTGACACACAATTTTCTTTAATTATTATTAGTTATAATTCTTTTAAATTAATTAATAGACATTTCATATGTATATCTAAAATTTAAAATCTAAATTGATAGAATTAATTTGGAGTTTGAATTGAAATAATGGTTAATTTATCGTTTAAATTAAGTTCCGAGTATAAATTGATATTTTTTTTAATTAAAATATAATTTCTGTCTCTATACTTTAGAAATAATTTTATTTTGGTTCAGAATTAATTTTATTTTGGTTCATGTACTTTCAAAATATCTAATTTTAGTAATGGTAATTTAAACAAATATTATAATTAGAATTTATTGATATATAGAATTTAAATTCAATGATTTATTTTTGTAAAGAAACATAGAAAATTAAAAGTACACAATGAAACCCAAATTCAAAGGCAAAATGAGAAAAAGGGGAAAAAGAAAAGTTAGGAAGTGAAGGGTCCCCCTAATTTCTTAAAATTTGGTACTTAAAATGCATTTGAATTTCCACTTTTGCAAAAGCTGTCTTCTTTATAAGCAGCTTTGATTTCTTGATATTATTCCTTTTGACAACATATCACTATTTCAAGGTATTATTGGTTTATGTTACAACTTACAAGGGTACAATACAAATGATGAACTCAACTCATTCACCATCGTCCACGTACAATTGTTTCAACCAAAAGAATAAACCACCATCCAATCAAGTCTCAATTAGGTTGTTTGATTGGTGCAACCCTTGGGTCTTTCAACTCTACTCAAATGAGCGGCCACGTTTTTCCTCTTTTATCGTTGAAGTTCAATCATCTATCTCAATAATTGTTGTATTTAAGAAAAAAGAATGTTAAGTTTTGTTTGTTTAAAATGTGTTGAATAGGTCATTAAAAACTTTCAGTTTTGTGTTTATCCCTAAAATTTTAATTGAGTGCCTATATTACTTTTTTTTTTTTTAGTTTAATTGTACATCTAGTTGGTCTTTGACTTATTTGACACTTTTCTAAATTTACAGATCTACTAAATACAAAATAGAATGTTTACAGTTAGATTACACATAAAAATCAATTTGAAATCTAATGTAATAAAAAATAGCAAGAACATTCAAAATTAAAAGTTTAGAAACTTGTTAAAGAGTTAATTCAAGAATCTACAAGACATATTAGAAACCTTCTTGATACAAAAATGAAAGTTTAGATGCTAAATTGTTATTGAAACTTTTTCATCTAGCTACTATGCTTATCTTACATCTTTTCTTTTAGGTTAGAAATCCTGTTTTAG ATGAGGGCAGCTCCACCAAATGCAATCAAGCTCGACGGTCAAATGCAGCTGATGCCGGAGCCACCCGCGGAGCCATCCCACTCCACTCGTCACTCCGTCCAGACGCTCGTGGTGCTGCTGGCGGCAATCACCATTTTAGGTGTCATTGCTCGAGTTTTCGCTCGCCTTTGCGGTGGAGGAACTGATGACAACATTGAAGGTTGGGTTCAAACAAGGTGCAACAGCTGCATTGACGGCAGCAGCCCCCCTGCTCCGCCGCTCCCGCCGTCGGAAGTGGCGGAGGAGGAGAAGAAGTTAGAAATCCTGTTTTAG ATGAGGGCAGCTCCACCAAATGCAATCAAGCTCGACGGTCAAATGCAGCTGATGCCGGAGCCACCCGCGGAGCCATCCCACTCCACTCGTCACTCCGTCCAGACGCTCGTGGTGCTGCTGGCGGCAATCACCATTTTAGGTGTCATTGCTCGAGTTTTCGCTCGCCTTTGCGGTGGAGGAACTGATGACAACATTGAAGGTTGGGTTCAAACAAGGTGCAACAGCTGCATTGACGGCAGCAGCCCCCCTGCTCCGCCGCTCCCGCCGTCGGAAGTGGCGGAGGAGGAGAAGAAGTTAGAAATCCTGTTTTAG MRAAPPNAIKLDGQMQLMPEPPAEPSHSTRHSVQTLVVLLAAITILGVIARVFARLCGGGTDDNIEGWVQTRCNSCIDGSSPPAPPLPPSEVAEEEKKLEILF* Homology
BLAST of Chy8G150620 vs. ExPASy TrEMBL
Match: A0A0A0KWC6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G166970 PE=4 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 3.4e-39 Identity = 88/99 (88.89%), Postives = 92/99 (92.93%), Query Frame = 0
BLAST of Chy8G150620 vs. ExPASy TrEMBL
Match: A0A5A7URI4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold513G00170 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 1.3e-38 Identity = 89/98 (90.82%), Postives = 91/98 (92.86%), Query Frame = 0
BLAST of Chy8G150620 vs. ExPASy TrEMBL
Match: A0A1S3CEC8 (uncharacterized protein LOC103499518 OS=Cucumis melo OX=3656 GN=LOC103499518 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 1.3e-38 Identity = 89/98 (90.82%), Postives = 91/98 (92.86%), Query Frame = 0
BLAST of Chy8G150620 vs. ExPASy TrEMBL
Match: A0A438JKT6 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_012350 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 4.8e-17 Identity = 55/104 (52.88%), Postives = 70/104 (67.31%), Query Frame = 0
BLAST of Chy8G150620 vs. ExPASy TrEMBL
Match: A0A5B6YV78 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_005108 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 8.1e-17 Identity = 53/98 (54.08%), Postives = 67/98 (68.37%), Query Frame = 0
BLAST of Chy8G150620 vs. NCBI nr
Match: XP_008460761.1 (PREDICTED: uncharacterized protein LOC103499518 [Cucumis melo] >KAA0056141.1 uncharacterized protein E6C27_scaffold697G00230 [Cucumis melo var. makuwa] >TYK14146.1 uncharacterized protein E5676_scaffold513G00170 [Cucumis melo var. makuwa]) HSP 1 Score: 167 bits (423), Expect = 1.30e-51 Identity = 89/98 (90.82%), Postives = 91/98 (92.86%), Query Frame = 0
BLAST of Chy8G150620 vs. NCBI nr
Match: KGN53864.2 (hypothetical protein Csa_019149 [Cucumis sativus]) HSP 1 Score: 162 bits (411), Expect = 9.97e-50 Identity = 84/96 (87.50%), Postives = 89/96 (92.71%), Query Frame = 0
BLAST of Chy8G150620 vs. NCBI nr
Match: XP_034693668.1 (uncharacterized protein LOC117920325 [Vitis riparia]) HSP 1 Score: 96.7 bits (239), Expect = 2.44e-23 Identity = 55/98 (56.12%), Postives = 68/98 (69.39%), Query Frame = 0
BLAST of Chy8G150620 vs. NCBI nr
Match: XP_010653790.1 (PREDICTED: uncharacterized protein LOC100250289 [Vitis vinifera] >RVX09549.1 hypothetical protein CK203_012350 [Vitis vinifera]) HSP 1 Score: 95.9 bits (237), Expect = 4.64e-23 Identity = 57/104 (54.81%), Postives = 70/104 (67.31%), Query Frame = 0
BLAST of Chy8G150620 vs. NCBI nr
Match: PIN10285.1 (hypothetical protein CDL12_17132 [Handroanthus impetiginosus] >PIN20013.1 hypothetical protein CDL12_07302 [Handroanthus impetiginosus]) HSP 1 Score: 93.2 bits (230), Expect = 4.29e-22 Identity = 47/87 (54.02%), Postives = 62/87 (71.26%), Query Frame = 0
BLAST of Chy8G150620 vs. TAIR 10
Match: AT3G57500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G26520.1); Has 51 Blast hits to 51 proteins in 11 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 87.0 bits (214), Expect = 9.5e-18 Identity = 52/108 (48.15%), Postives = 68/108 (62.96%), Query Frame = 0
BLAST of Chy8G150620 vs. TAIR 10
Match: AT2G26520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57500.1); Has 51 Blast hits to 51 proteins in 11 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 47.4 bits (111), Expect = 8.3e-06 Identity = 24/68 (35.29%), Postives = 36/68 (52.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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